FastQCFastQC Report
Thu 7 Jul 2022
SRR3321256.fastq.trimmed.20220707.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321256.fastq.trimmed.20220707.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4394688
Sequences flagged as poor quality0
Sequence length15-36
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AATGATACGGCGACCACCGAGATCTACACTCTTTCC147200.3349498303406294Illumina Single End PCR Primer 1 (100% over 36bp)
CCACAACATCCTTGGAAAAAGGATCCTGCCATGTTC55400.12606128125591623No Hit
GCCAAATCCATCCCCTTTATGGACAAGCCACTGGGA44240.1006669870534609No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)