FastQCFastQC Report
Thu 7 Jul 2022
SRR3321246.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321246.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29304085
Sequences flagged as poor quality0
Sequence length36
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACAACATCCTTGGAAAAAGGATCCTGCCATGTTC458680.1565242525060926No Hit
CAACATCCTTGGAAAAAGGATCCTGCCATGTTCTCC383250.13078381392901364No Hit
GGAGGATCCTACAATTATGACATATCTAAAATGTCT346650.11829408766729962No Hit
CTCCCACATCCGACCAGCTGCATCATGGCAGTTATC310470.10594768613317904No Hit
CCCACATCCGACCAGCTGCATCATGGCAGTTATCAA305830.10436428914262295No Hit
GCCAAATCCATCCCCTTTATGGACAAGCCACTGGGA305660.10430627675288273No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)