FastQCFastQC Report
Thu 7 Jul 2022
SRR3321244.fastq.trimmed.20220707.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321244.fastq.trimmed.20220707.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5259761
Sequences flagged as poor quality0
Sequence length15-36
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACAACATCCTTGGAAAAAGGATCCTGCCATGTTC69140.13145083968644203No Hit
CTCCCACATCCGACCAGCTGCATCATGGCAGTTATC60460.11494818871047563No Hit
GCCAAATCCATCCCCTTTATGGACAAGCCACTGGGA56590.10759043994584545No Hit
CAACATCCTTGGAAAAAGGATCCTGCCATGTTCTCC56120.10669686322249243No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)