FastQCFastQC Report
Thu 7 Jul 2022
SRR3321242.fastq.trimmed.20220707.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321242.fastq.trimmed.20220707.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5233726
Sequences flagged as poor quality0
Sequence length15-36
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCAAATCCATCCCCTTTATGGACAAGCCACTGGGA57200.10929116273950909No Hit
CCACAACATCCTTGGAAAAAGGATCCTGCCATGTTC55810.1066353110575525No Hit
CAACATCCTTGGAAAAAGGATCCTGCCATGTTCTCC55520.10608121250520183No Hit
CCCACATCCGACCAGCTGCATCATGGCAGTTATCAA52750.10078861598792142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)