FastQCFastQC Report
Thu 7 Jul 2022
SRR3321233.fastq.trimmed.20220707.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321233.fastq.trimmed.20220707.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4140488
Sequences flagged as poor quality0
Sequence length15-36
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCGGGATAGCTTGCCTCTTTTGGCCGGTGAGTAG92310.222944735016742No Hit
CTCAGACAGGCGTAGCCCCAGGAGGAACCTGGAGCC80750.19502532068683692No Hit
CGGACACGGAAAGGATTGACAGATTGATAGCTCTTT65680.15862864473946067No Hit
CTGACTTTCAATAGATCGCAGCGAGTGAGCTGCTCT62440.15080348016948728No Hit
CCGGGATAGCTTGCCTCTTTTGGCCGGTGAGTAGAG60330.1457074625020046No Hit
CCTCAGACAGGCGTAGCCCCAGGAGGAACCTGGAGC59460.14360626090451173No Hit
CCCGGGATAGCTTGCCTCTTTTGGCCGGTGAGTAGA55770.13469426792204203No Hit
CTCGGCTCGTGCGTCGATGAAGAACGCAGCTAGCTG53820.12998467813455805No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)