FastQCFastQC Report
Thu 7 Jul 2022
SRR3321220.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321220.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2622023
Sequences flagged as poor quality0
Sequence length36
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAT1336835.098467862410056TruSeq Adapter, Index 9 (100% over 36bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGA382901.4603228118136264TruSeq Adapter, Index 7 (97% over 35bp)
CGTATGCCGTCTTCTGCTTGAGATCGGAAGAGCACA68720.2620877086127772No Hit
CCACAACATCCTTGGAAAAAGGATCCTGCCATGTTC26470.10095258508411252No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)