FastQCFastQC Report
Thu 7 Jul 2022
SRR3321214.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321214.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4735886
Sequences flagged as poor quality0
Sequence length36
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCG990142.090717555278991TruSeq Adapter, Index 7 (97% over 36bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACCC278040.5870918345585177TruSeq Adapter, Index 5 (97% over 35bp)
CGTATGCCGTCTTCTGCTTGAGATCGGAAGAGCACA127740.2697277763865093No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)