FastQCFastQC Report
Thu 7 Jul 2022
SRR3321213.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321213.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9236186
Sequences flagged as poor quality0
Sequence length36
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACATG1873382.0283047569635344TruSeq Adapter, Index 15 (100% over 36bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACAT200210.21676696419929176TruSeq Adapter, Index 1 (100% over 35bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)