FastQCFastQC Report
Thu 7 Jul 2022
SRR3321208.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321208.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5970607
Sequences flagged as poor quality0
Sequence length36
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACTG3068665.1396114331423925TruSeq Adapter, Index 2 (97% over 35bp)
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTGA1496092.5057586272216543TruSeq Adapter, Index 2 (97% over 36bp)
CCACAACATCCTTGGAAAAAGGATCCTGCCATGTTC81990.13732272112366464No Hit
CAACATCCTTGGAAAAAGGATCCTGCCATGTTCTCC60560.10143022309122003No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)