FastQCFastQC Report
Thu 7 Jul 2022
SRR3321207.fastq.trimmed.20220707.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321207.fastq.trimmed.20220707.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8841929
Sequences flagged as poor quality0
Sequence length15-36
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCCGGGATAGCTTGCCTCTTTTGGCCGGTGAGTAG211920.23967620640247167No Hit
CTCAGACAGGCGTAGCCCCAGGAGGAACCTGGAGCC188910.21365247334603116No Hit
CGGACACGGAAAGGATTGACAGATTGATAGCTCTTT150770.1705170896531741No Hit
CCTCAGACAGGCGTAGCCCCAGGAGGAACCTGGAGC142000.16059843954865505No Hit
CTGACTTTCAATAGATCGCAGCGAGTGAGCTGCTCT141660.1602139080736794No Hit
CCGGGATAGCTTGCCTCTTTTGGCCGGTGAGTAGAG136720.15462689193726845No Hit
CCCGGGATAGCTTGCCTCTTTTGGCCGGTGAGTAGA126720.14331714267327864No Hit
CTCGGCTCGTGCGTCGATGAAGAACGCAGCTAGCTG104840.11857141128366899No Hit
CCTCACCCGGCCCGGACACGGAAAGGATTGACAGAT91070.10299788654715503No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)