FastQCFastQC Report
Thu 7 Jul 2022
SRR3321206.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321206.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13793525
Sequences flagged as poor quality0
Sequence length36
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACAACATCCTTGGAAAAAGGATCCTGCCATGTTC266430.193155846674436No Hit
CAACATCCTTGGAAAAAGGATCCTGCCATGTTCTCC233310.1691445805187579No Hit
CTCCCACATCCGACCAGCTGCATCATGGCAGTTATC197500.14318312396577382No Hit
CCCACATCCGACCAGCTGCATCATGGCAGTTATCAA173980.12613164510159658No Hit
GCCAAATCCATCCCCTTTATGGACAAGCCACTGGGA155160.11248756209888335No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCC146460.10618025486596067TruSeq Adapter, Index 6 (100% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)