FastQCFastQC Report
Thu 7 Jul 2022
SRR3321206.fastq.trimmed.20220707.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321206.fastq.trimmed.20220707.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13719942
Sequences flagged as poor quality0
Sequence length15-36
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAACATCCTTGGAAAAAGGATCCTGCCATGTTCTCC233250.17000800732247995No Hit
CTCCCACATCCGACCAGCTGCATCATGGCAGTTATC197410.14388544791224336No Hit
CCCACATCCGACCAGCTGCATCATGGCAGTTATCAA173930.12677167294147454No Hit
GCCAAATCCATCCCCTTTATGGACAAGCCACTGGGA155110.11305441378688043No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCC146420.10672056776916403TruSeq Adapter, Index 6 (100% over 36bp)

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)