FastQCFastQC Report
Thu 7 Jul 2022
SRR3321202.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR3321202.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7548063
Sequences flagged as poor quality0
Sequence length36
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGTT534200.7077312417768638TruSeq Adapter, Index 9 (97% over 36bp)
AGATCGGAAGAGCACACGTCTGAACTCCAGTCACGT304810.40382545826657784TruSeq Adapter, Index 1 (97% over 35bp)
CCACAACATCCTTGGAAAAAGGATCCTGCCATGTTC80260.10633191588358497No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)