#==================================================
#All numbers are READ count
#==================================================

Total records:                          80553129

QC failed:                              0
Optical/PCR duplicate:                  47180350
Non primary hits                        7098706
Unmapped reads:                         0
mapq < mapq_cut (non-unique):           1602565

mapq >= mapq_cut (unique):              24671508
Read-1:                                 12331502
Read-2:                                 12340006
Reads map to '+':                       12335883
Reads map to '-':                       12335625
Non-splice reads:                       19684699
Splice reads:                           4986809
Reads mapped in proper pairs:           24649326
Proper-paired reads map to different chrom:0