FastQCFastQC Report
Thu 24 Mar 2022
ctenidia_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenamectenidia_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60302305
Sequences flagged as poor quality0
Sequence length35-151
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGC25409514.21368801739834TruSeq Adapter, Index 12 (100% over 50bp)
ATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGCC2980680.4942895632264803TruSeq Adapter, Index 12 (100% over 50bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT783040.12985241608923573No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN652820.10825788500124497No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)