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        If you use plots from MultiQC in a publication or presentation, please cite:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

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        About MultiQC

        This report was generated using MultiQC, version 1.8

        You can see a YouTube video describing how to use MultiQC reports here: https://youtu.be/qPbIlO_KWN0

        For more information about MultiQC, including other videos and extensive documentation, please visit http://multiqc.info

        You can report bugs, suggest improvements and find the source code for MultiQC on GitHub: https://github.com/ewels/MultiQC

        MultiQC is published in Bioinformatics:

        MultiQC: Summarize analysis results for multiple tools and samples in a single report
        Philip Ewels, Måns Magnusson, Sverker Lundin and Max Käller
        Bioinformatics (2016)
        doi: 10.1093/bioinformatics/btw354
        PMID: 27312411

        A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.

        Report generated on 2021-05-18, 11:45 based on data in: /gscratch/scrubbed/samwhite/outputs/20210518_olur_fastp_bgi


        General Statistics

        Showing 9/9 rows and 4/6 columns.
        Sample Name% DuplicationGC content% PF% Adapter
        151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37
        0.3%
        36.7%
        100.0%
        3.1%
        151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66
        0.4%
        36.5%
        100.0%
        2.9%
        151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96
        1.9%
        37.2%
        100.0%
        4.2%
        160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62
        4.5%
        37.5%
        99.7%
        0.9%
        160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75
        15.1%
        37.4%
        99.7%
        0.6%
        160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62
        3.4%
        37.6%
        99.7%
        0.9%
        160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75
        11.7%
        37.5%
        99.9%
        0.4%
        160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74
        2.1%
        38.0%
        100.0%
        0.8%
        160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74
        2.7%
        38.0%
        99.8%
        1.2%

        fastp

        fastp An ultra-fast all-in-one FASTQ preprocessor (QC, adapters, trimming, filtering, splitting...)

        Filtered Reads

        Filtering statistics of sampled reads.

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        Duplication Rates

        Duplication rates of sampled reads.

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        Insert Sizes

        Insert size estimation of sampled reads.

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        Sequence Quality

        Average sequencing quality over each base of all reads.

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        GC Content

        Average GC content over each base of all reads.

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        N content

        Average N content over each base of all reads.

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