Sample	command
151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37_1.fq.gz --in2 151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37_2.fq.gz --detect_adapter_for_pe --thread 40 --html 151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37.fastp-trim.20210518.report.html --json 151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37.fastp-trim.20210518.report.json --out1 151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37_1.fastp-trim.20210518.fq.gz --out2 151114_I191_FCH3Y35BCXX_L1_wHAIPI023992-37_2.fastp-trim.20210518.fq.gz 
151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66_1.fq.gz --in2 151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66_2.fq.gz --detect_adapter_for_pe --thread 40 --html 151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66.fastp-trim.20210518.report.html --json 151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66.fastp-trim.20210518.report.json --out1 151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66_1.fastp-trim.20210518.fq.gz --out2 151114_I191_FCH3Y35BCXX_L2_wHAMPI023991-66_2.fastp-trim.20210518.fq.gz 
151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96_1.fq.gz --in2 151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96_2.fq.gz --detect_adapter_for_pe --thread 40 --html 151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96.fastp-trim.20210518.report.html --json 151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96.fastp-trim.20210518.report.json --out1 151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96_1.fastp-trim.20210518.fq.gz --out2 151118_I137_FCH3KNJBBXX_L5_wHAXPI023905-96_2.fastp-trim.20210518.fq.gz 
160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62_1.fq.gz --in2 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62_2.fq.gz --detect_adapter_for_pe --thread 40 --html 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62.fastp-trim.20210518.report.html --json 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62.fastp-trim.20210518.report.json --out1 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62_1.fastp-trim.20210518.fq.gz --out2 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCABDLAAPEI-62_2.fastp-trim.20210518.fq.gz 
160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75_1.fq.gz --in2 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75_2.fq.gz --detect_adapter_for_pe --thread 40 --html 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75.fastp-trim.20210518.report.html --json 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75.fastp-trim.20210518.report.json --out1 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75_1.fastp-trim.20210518.fq.gz --out2 160103_I137_FCH3V5YBBXX_L3_WHOSTibkDCACDTAAPEI-75_2.fastp-trim.20210518.fq.gz 
160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62_1.fq.gz --in2 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62_2.fq.gz --detect_adapter_for_pe --thread 40 --html 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62.fastp-trim.20210518.report.html --json 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62.fastp-trim.20210518.report.json --out1 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62_1.fastp-trim.20210518.fq.gz --out2 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCABDLAAPEI-62_2.fastp-trim.20210518.fq.gz 
160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75_1.fq.gz --in2 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75_2.fq.gz --detect_adapter_for_pe --thread 40 --html 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75.fastp-trim.20210518.report.html --json 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75.fastp-trim.20210518.report.json --out1 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75_1.fastp-trim.20210518.fq.gz --out2 160103_I137_FCH3V5YBBXX_L4_WHOSTibkDCACDTAAPEI-75_2.fastp-trim.20210518.fq.gz 
160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74_1.fq.gz --in2 160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74_2.fq.gz --detect_adapter_for_pe --thread 40 --html 160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74.fastp-trim.20210518.report.html --json 160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74.fastp-trim.20210518.report.json --out1 160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74_1.fastp-trim.20210518.fq.gz --out2 160103_I137_FCH3V5YBBXX_L5_WHOSTibkDCAADWAAPEI-74_2.fastp-trim.20210518.fq.gz 
160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74_1.fq.gz --in2 160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74_2.fq.gz --detect_adapter_for_pe --thread 40 --html 160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74.fastp-trim.20210518.report.html --json 160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74.fastp-trim.20210518.report.json --out1 160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74_1.fastp-trim.20210518.fq.gz --out2 160103_I137_FCH3V5YBBXX_L6_WHOSTibkDCAADWAAPEI-74_2.fastp-trim.20210518.fq.gz