diamond v0.9.29.130 | by Benjamin Buchfink <buchfink@gmail.com>
Licensed under the GNU GPL <https://www.gnu.org/licenses/gpl.txt>
Check http://github.com/bbuchfink/diamond for updates.

#CPU threads: 28
Scoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1)
Temporary directory: 
Opening the database...  [0.106909s]
#Target sequences to report alignments for: 1
Loading taxonomy mapping...  [1.46346s]
Opening the input file...  [0.084738s]
Opening the output file...  [0.000451s]
Loading query sequences...  [11.5206s]
Masking queries...  [7.69989s]
Building query seed set...  [0.000642s]
Algorithm: Double-indexed
Building query histograms...  [10.8243s]
Allocating buffers...  [0.001989s]
Loading reference sequences...  [41.4651s]
Masking reference...  [64.2372s]
Initializing temporary storage...  [0.012487s]
Building reference histograms...  [92.0454s]
Allocating buffers...  [0.001817s]
Processing query block 0, reference block 0, shape 0, index chunk 0.
Building reference seed array...  [9.39816s]
Building query seed array...  [1.09801s]
Computing hash join...  [7.65671s]
Building seed filter...  [0.116391s]
Searching alignments...  [69.4578s]
Processing query block 0, reference block 0, shape 0, index chunk 1.
Building reference seed array...  [10.3835s]
Building query seed array...  [1.44541s]
Computing hash join...  [7.54517s]
Building seed filter...  [0.237718s]
Searching alignments...  [67.7971s]
Processing query block 0, reference block 0, shape 0, index chunk 2.
Building reference seed array...  [11.6472s]
Building query seed array...  [1.38581s]
Computing hash join...  [7.85336s]
Building seed filter...  [0.113487s]
Searching alignments...  [68.6405s]
Processing query block 0, reference block 0, shape 0, index chunk 3.
Building reference seed array...  [8.55438s]
Building query seed array...  [1.21029s]
Computing hash join...  [7.44189s]
Building seed filter...  [0.14217s]
Searching alignments...  [67.7809s]
Processing query block 0, reference block 0, shape 1, index chunk 0.
Building reference seed array...  [8.1483s]
Building query seed array...  [1.17727s]
Computing hash join...  [7.72499s]
Building seed filter...  [0.108604s]
Searching alignments...  [65.162s]
Processing query block 0, reference block 0, shape 1, index chunk 1.
Building reference seed array...  [10.976s]
Building query seed array...  [1.45408s]
Computing hash join...  [6.79409s]
Building seed filter...  [0.116948s]
Searching alignments...  [63.8329s]
Processing query block 0, reference block 0, shape 1, index chunk 2.
Building reference seed array...  [10.7287s]
Building query seed array...  [1.39411s]
Computing hash join...  [7.67696s]
Building seed filter...  [0.107587s]
Searching alignments...  [62.2688s]
Processing query block 0, reference block 0, shape 1, index chunk 3.
Building reference seed array...  [9.1598s]
Building query seed array...  [1.17999s]
Computing hash join...  [6.74787s]
Building seed filter...  [0.161479s]
Searching alignments...  [63.2817s]
Processing query block 0, reference block 0, shape 2, index chunk 0.
Building reference seed array...  [8.26453s]
Building query seed array...  [1.18096s]
Computing hash join...  [7.59986s]
Building seed filter...  [0.154477s]
Searching alignments...  [66.7189s]
Processing query block 0, reference block 0, shape 2, index chunk 1.
Building reference seed array...  [11.0376s]
Building query seed array...  [1.34186s]
Computing hash join...  [7.2312s]
Building seed filter...  [0.169855s]
Searching alignments...  [64.4926s]
Processing query block 0, reference block 0, shape 2, index chunk 2.
Building reference seed array...  [11.739s]
Building query seed array...  [1.39098s]
Computing hash join...  [7.28823s]
Building seed filter...  [0.170634s]
Searching alignments...  [64.3654s]
Processing query block 0, reference block 0, shape 2, index chunk 3.
Building reference seed array...  [7.88072s]
Building query seed array...  [1.13067s]
Computing hash join...  [7.33628s]
Building seed filter...  [0.137951s]
Searching alignments...  [64.7444s]
Processing query block 0, reference block 0, shape 3, index chunk 0.
Building reference seed array...  [8.09975s]
Building query seed array...  [1.14432s]
Computing hash join...  [7.34092s]
Building seed filter...  [0.209237s]
Searching alignments...  [64.9284s]
Processing query block 0, reference block 0, shape 3, index chunk 1.
Building reference seed array...  [11.0303s]
Building query seed array...  [1.37777s]
Computing hash join...  [7.15216s]
Building seed filter...  [0.261967s]
Searching alignments...  [62.7764s]
Processing query block 0, reference block 0, shape 3, index chunk 2.
Building reference seed array...  [10.8802s]
Building query seed array...  [1.52843s]
Computing hash join...  [7.21636s]
Building seed filter...  [0.250078s]
Searching alignments...  [61.9808s]
Processing query block 0, reference block 0, shape 3, index chunk 3.
Building reference seed array...  [8.37125s]
Building query seed array...  [1.22724s]
Computing hash join...  [7.40119s]
Building seed filter...  [0.188082s]
Searching alignments...  [62.4134s]
Processing query block 0, reference block 0, shape 4, index chunk 0.
Building reference seed array...  [8.72466s]
Building query seed array...  [1.22946s]
Computing hash join...  [7.01985s]
Building seed filter...  [0.1659s]
Searching alignments...  [63.0551s]
Processing query block 0, reference block 0, shape 4, index chunk 1.
Building reference seed array...  [10.3229s]
Building query seed array...  [1.36772s]
Computing hash join...  [7.0999s]
Building seed filter...  [0.169394s]
Searching alignments...  [61.9303s]
Processing query block 0, reference block 0, shape 4, index chunk 2.
Building reference seed array...  [11.419s]
Building query seed array...  [1.41458s]
Computing hash join...  [7.033s]
Building seed filter...  [0.234593s]
Searching alignments...  [61.5698s]
Processing query block 0, reference block 0, shape 4, index chunk 3.
Building reference seed array...  [8.60566s]
Building query seed array...  [1.15104s]
Computing hash join...  [7.19674s]
Building seed filter...  [0.187555s]
Searching alignments...  [61.6801s]
Processing query block 0, reference block 0, shape 5, index chunk 0.
Building reference seed array...  [8.05372s]
Building query seed array...  [1.12803s]
Computing hash join...  [6.9514s]
Building seed filter...  [0.1271s]
Searching alignments...  [64.0544s]
Processing query block 0, reference block 0, shape 5, index chunk 1.
Building reference seed array...  [10.7985s]
Building query seed array...  [1.39858s]
Computing hash join...  [7.17336s]
Building seed filter...  [0.1912s]
Searching alignments...  [62.7586s]
Processing query block 0, reference block 0, shape 5, index chunk 2.
Building reference seed array...  [11.777s]
Building query seed array...  [1.41683s]
Computing hash join...  [6.85027s]
Building seed filter...  [0.114435s]
Searching alignments...  [61.8634s]
Processing query block 0, reference block 0, shape 5, index chunk 3.
Building reference seed array...  [7.92249s]
Building query seed array...  [1.07984s]
Computing hash join...  [7.21818s]
Building seed filter...  [0.192555s]
Searching alignments...  [63.2685s]
Processing query block 0, reference block 0, shape 6, index chunk 0.
Building reference seed array...  [8.21329s]
Building query seed array...  [1.40938s]
Computing hash join...  [7.33651s]
Building seed filter...  [0.177014s]
Searching alignments...  [62.6823s]
Processing query block 0, reference block 0, shape 6, index chunk 1.
Building reference seed array...  [10.0078s]
Building query seed array...  [1.32977s]
Computing hash join...  [7.53429s]
Building seed filter...  [0.109922s]
Searching alignments...  [61.1237s]
Processing query block 0, reference block 0, shape 6, index chunk 2.
Building reference seed array...  [11.8754s]
Building query seed array...  [1.51019s]
Computing hash join...  [7.13924s]
Building seed filter...  [0.10855s]
Searching alignments...  [61.104s]
Processing query block 0, reference block 0, shape 6, index chunk 3.
Building reference seed array...  [8.99181s]
Building query seed array...  [1.29314s]
Computing hash join...  [6.82294s]
Building seed filter...  [0.212802s]
Searching alignments...  [61.9332s]
Processing query block 0, reference block 0, shape 7, index chunk 0.
Building reference seed array...  [8.63568s]
Building query seed array...  [1.24221s]
Computing hash join...  [7.02235s]
Building seed filter...  [0.194968s]
Searching alignments...  [63.4949s]
Processing query block 0, reference block 0, shape 7, index chunk 1.
Building reference seed array...  [10.6516s]
Building query seed array...  [1.3921s]
Computing hash join...  [7.19399s]
Building seed filter...  [0.210727s]
Searching alignments...  [61.9205s]
Processing query block 0, reference block 0, shape 7, index chunk 2.
Building reference seed array...  [10.9532s]
Building query seed array...  [1.5275s]
Computing hash join...  [7.22584s]
Building seed filter...  [0.104994s]
Searching alignments...  [61.8262s]
Processing query block 0, reference block 0, shape 7, index chunk 3.
Building reference seed array...  [8.92175s]
Building query seed array...  [1.15768s]
Computing hash join...  [7.12706s]
Building seed filter...  [0.126606s]
Searching alignments...  [62.3019s]
Processing query block 0, reference block 0, shape 8, index chunk 0.
Building reference seed array...  [9.37744s]
Building query seed array...  [1.27547s]
Computing hash join...  [6.89314s]
Building seed filter...  [0.171301s]
Searching alignments...  [64.3524s]
Processing query block 0, reference block 0, shape 8, index chunk 1.
Building reference seed array...  [10.7171s]
Building query seed array...  [1.45495s]
Computing hash join...  [7.26955s]
Building seed filter...  [0.193209s]
Searching alignments...  [63.011s]
Processing query block 0, reference block 0, shape 8, index chunk 2.
Building reference seed array...  [11.0556s]
Building query seed array...  [1.36533s]
Computing hash join...  [7.1691s]
Building seed filter...  [0.218938s]
Searching alignments...  [62.294s]
Processing query block 0, reference block 0, shape 8, index chunk 3.
Building reference seed array...  [8.2279s]
Building query seed array...  [1.13481s]
Computing hash join...  [7.33245s]
Building seed filter...  [0.137553s]
Searching alignments...  [62.7432s]
Processing query block 0, reference block 0, shape 9, index chunk 0.
Building reference seed array...  [8.91407s]
Building query seed array...  [1.24696s]
Computing hash join...  [6.64337s]
Building seed filter...  [0.17163s]
Searching alignments...  [61.185s]
Processing query block 0, reference block 0, shape 9, index chunk 1.
Building reference seed array...  [10.6339s]
Building query seed array...  [1.42227s]
Computing hash join...  [7.15447s]
Building seed filter...  [0.202607s]
Searching alignments...  [60.5468s]
Processing query block 0, reference block 0, shape 9, index chunk 2.
Building reference seed array...  [11.3489s]
Building query seed array...  [1.44625s]
Computing hash join...  [7.56664s]
Building seed filter...  [0.141549s]
Searching alignments...  [59.8185s]
Processing query block 0, reference block 0, shape 9, index chunk 3.
Building reference seed array...  [9.11255s]
Building query seed array...  [1.22472s]
Computing hash join...  [7.17195s]
Building seed filter...  [0.10874s]
Searching alignments...  [59.7051s]
Processing query block 0, reference block 0, shape 10, index chunk 0.
Building reference seed array...  [9.1846s]
Building query seed array...  [1.16827s]
Computing hash join...  [6.60364s]
Building seed filter...  [0.21907s]
Searching alignments...  [64.0346s]
Processing query block 0, reference block 0, shape 10, index chunk 1.
Building reference seed array...  [10.101s]
Building query seed array...  [1.31104s]
Computing hash join...  [7.31433s]
Building seed filter...  [0.146174s]
Searching alignments...  [62.8063s]
Processing query block 0, reference block 0, shape 10, index chunk 2.
Building reference seed array...  [10.7945s]
Building query seed array...  [1.39614s]
Computing hash join...  [7.90183s]
Building seed filter...  [0.150814s]
Searching alignments...  [62.4924s]
Processing query block 0, reference block 0, shape 10, index chunk 3.
Building reference seed array...  [8.73994s]
Building query seed array...  [1.18514s]
Computing hash join...  [7.62848s]
Building seed filter...  [0.181693s]
Searching alignments...  [63.41s]
Processing query block 0, reference block 0, shape 11, index chunk 0.
Building reference seed array...  [8.63805s]
Building query seed array...  [1.26451s]
Computing hash join...  [7.23478s]
Building seed filter...  [0.168381s]
Searching alignments...  [61.7462s]
Processing query block 0, reference block 0, shape 11, index chunk 1.
Building reference seed array...  [10.9491s]
Building query seed array...  [1.42996s]
Computing hash join...  [6.87749s]
Building seed filter...  [0.113822s]
Searching alignments...  [60.4424s]
Processing query block 0, reference block 0, shape 11, index chunk 2.
Building reference seed array...  [11.0721s]
Building query seed array...  [1.35475s]
Computing hash join...  [7.6752s]
Building seed filter...  [0.119475s]
Searching alignments...  [60.726s]
Processing query block 0, reference block 0, shape 11, index chunk 3.
Building reference seed array...  [8.87721s]
Building query seed array...  [1.16929s]
Computing hash join...  [6.53218s]
Building seed filter...  [0.21979s]
Searching alignments...  [61.2582s]
Processing query block 0, reference block 0, shape 12, index chunk 0.
Building reference seed array...  [8.44715s]
Building query seed array...  [1.27613s]
Computing hash join...  [6.53384s]
Building seed filter...  [0.175733s]
Searching alignments...  [61.4819s]
Processing query block 0, reference block 0, shape 12, index chunk 1.
Building reference seed array...  [10.3805s]
Building query seed array...  [1.45409s]
Computing hash join...  [7.62489s]
Building seed filter...  [0.180907s]
Searching alignments...  [59.8781s]
Processing query block 0, reference block 0, shape 12, index chunk 2.
Building reference seed array...  [11.0777s]
Building query seed array...  [1.43533s]
Computing hash join...  [7.11443s]
Building seed filter...  [0.177091s]
Searching alignments...  [60.3408s]
Processing query block 0, reference block 0, shape 12, index chunk 3.
Building reference seed array...  [9.09122s]
Building query seed array...  [1.31771s]
Computing hash join...  [6.32769s]
Building seed filter...  [0.208382s]
Searching alignments...  [60.788s]
Processing query block 0, reference block 0, shape 13, index chunk 0.
Building reference seed array...  [8.05491s]
Building query seed array...  [1.13236s]
Computing hash join...  [7.8824s]
Building seed filter...  [0.203363s]
Searching alignments...  [63.6743s]
Processing query block 0, reference block 0, shape 13, index chunk 1.
Building reference seed array...  [11.3923s]
Building query seed array...  [1.41726s]
Computing hash join...  [6.8087s]
Building seed filter...  [0.111349s]
Searching alignments...  [61.8934s]
Processing query block 0, reference block 0, shape 13, index chunk 2.
Building reference seed array...  [10.6076s]
Building query seed array...  [1.36028s]
Computing hash join...  [7.3536s]
Building seed filter...  [0.166831s]
Searching alignments...  [61.9032s]
Processing query block 0, reference block 0, shape 13, index chunk 3.
Building reference seed array...  [8.51383s]
Building query seed array...  [1.27902s]
Computing hash join...  [7.09389s]
Building seed filter...  [0.118435s]
Searching alignments...  [62.9057s]
Processing query block 0, reference block 0, shape 14, index chunk 0.
Building reference seed array...  [8.32616s]
Building query seed array...  [1.17704s]
Computing hash join...  [7.75887s]
Building seed filter...  [0.112878s]
Searching alignments...  [62.7709s]
Processing query block 0, reference block 0, shape 14, index chunk 1.
Building reference seed array...  [11.3802s]
Building query seed array...  [1.38387s]
Computing hash join...  [6.89033s]
Building seed filter...  [0.104523s]
Searching alignments...  [61.4181s]
Processing query block 0, reference block 0, shape 14, index chunk 2.
Building reference seed array...  [11.4862s]
Building query seed array...  [1.48877s]
Computing hash join...  [6.80105s]
Building seed filter...  [0.166599s]
Searching alignments...  [62.9848s]
Processing query block 0, reference block 0, shape 14, index chunk 3.
Building reference seed array...  [8.41953s]
Building query seed array...  [1.24032s]
Computing hash join...  [6.13071s]
Building seed filter...  [0.168445s]
Searching alignments...  [62.7206s]
Processing query block 0, reference block 0, shape 15, index chunk 0.
Building reference seed array...  [9.12993s]
Building query seed array...  [1.20704s]
Computing hash join...  [6.85693s]
Building seed filter...  [0.105449s]
Searching alignments...  [62.1193s]
Processing query block 0, reference block 0, shape 15, index chunk 1.
Building reference seed array...  [10.8912s]
Building query seed array...  [1.57278s]
Computing hash join...  [7.27074s]
Building seed filter...  [0.110016s]
Searching alignments...  [60.865s]
Processing query block 0, reference block 0, shape 15, index chunk 2.
Building reference seed array...  [11.5595s]
Building query seed array...  [1.48621s]
Computing hash join...  [6.79136s]
Building seed filter...  [0.146273s]
Searching alignments...  [60.7875s]
Processing query block 0, reference block 0, shape 15, index chunk 3.
Building reference seed array...  [8.30908s]
Building query seed array...  [1.24415s]
Computing hash join...  [6.60169s]
Building seed filter...  [0.144835s]
Searching alignments...  [61.1872s]
Deallocating buffers...  [1.89661s]
Opening temporary output file...  [0.00116s]
Computing alignments...  [8119.67s]
Deallocating reference...  [1.34456s]
Loading reference sequences...  [15.0843s]
Masking reference...  [23.7912s]
Initializing temporary storage...  [0.003829s]
Building reference histograms...  [32.6222s]
Allocating buffers...  [0.001142s]
Processing query block 0, reference block 1, shape 0, index chunk 0.
Building reference seed array...  [3.60168s]
Building query seed array...  [1.16508s]
Computing hash join...  [1.88868s]
Building seed filter...  [0.082032s]
Searching alignments...  [29.0591s]
Processing query block 0, reference block 1, shape 0, index chunk 1.
Building reference seed array...  [4.59341s]
Building query seed array...  [1.32549s]
Computing hash join...  [1.9533s]
Building seed filter...  [0.084483s]
Searching alignments...  [28.3738s]
Processing query block 0, reference block 1, shape 0, index chunk 2.
Building reference seed array...  [4.02602s]
Building query seed array...  [1.34552s]
Computing hash join...  [2.01401s]
Building seed filter...  [0.083062s]
Searching alignments...  [28.1257s]
Processing query block 0, reference block 1, shape 0, index chunk 3.
Building reference seed array...  [3.429s]
Building query seed array...  [1.11134s]
Computing hash join...  [1.93052s]
Building seed filter...  [0.12195s]
Searching alignments...  [28.03s]
Processing query block 0, reference block 1, shape 1, index chunk 0.
Building reference seed array...  [3.28035s]
Building query seed array...  [1.14379s]
Computing hash join...  [1.97455s]
Building seed filter...  [0.085489s]
Searching alignments...  [26.127s]
Processing query block 0, reference block 1, shape 1, index chunk 1.
Building reference seed array...  [4.07445s]
Building query seed array...  [1.31014s]
Computing hash join...  [2.29449s]
Building seed filter...  [0.108517s]
Searching alignments...  [25.4015s]
Processing query block 0, reference block 1, shape 1, index chunk 2.
Building reference seed array...  [4.25905s]
Building query seed array...  [1.40275s]
Computing hash join...  [1.90343s]
Building seed filter...  [0.084704s]
Searching alignments...  [25.5212s]
Processing query block 0, reference block 1, shape 1, index chunk 3.
Building reference seed array...  [3.26703s]
Building query seed array...  [1.0655s]
Computing hash join...  [2.04545s]
Building seed filter...  [0.082452s]
Searching alignments...  [25.4911s]
Processing query block 0, reference block 1, shape 2, index chunk 0.
Building reference seed array...  [3.31653s]
Building query seed array...  [1.1182s]
Computing hash join...  [2.17748s]
Building seed filter...  [0.083747s]
Searching alignments...  [26.6737s]
Processing query block 0, reference block 1, shape 2, index chunk 1.
Building reference seed array...  [3.91841s]
Building query seed array...  [1.325s]
Computing hash join...  [2.02288s]
Building seed filter...  [0.085715s]
Searching alignments...  [27.1269s]
Processing query block 0, reference block 1, shape 2, index chunk 2.
Building reference seed array...  [4.14207s]
Building query seed array...  [1.36082s]
Computing hash join...  [2.29887s]
Building seed filter...  [0.082881s]
Searching alignments...  [26.135s]
Processing query block 0, reference block 1, shape 2, index chunk 3.
Building reference seed array...  [3.31345s]
Building query seed array...  [1.0621s]
Computing hash join...  [1.8988s]
Building seed filter...  [0.096686s]
Searching alignments...  [26.5577s]
Processing query block 0, reference block 1, shape 3, index chunk 0.
Building reference seed array...  [3.26517s]
Building query seed array...  [1.14454s]
Computing hash join...  [1.98944s]
Building seed filter...  [0.084088s]
Searching alignments...  [26.1942s]
Processing query block 0, reference block 1, shape 3, index chunk 1.
Building reference seed array...  [4.11451s]
Building query seed array...  [1.35274s]
Computing hash join...  [2.19333s]
Building seed filter...  [0.11577s]
Searching alignments...  [25.5393s]
Processing query block 0, reference block 1, shape 3, index chunk 2.
Building reference seed array...  [4.30912s]
Building query seed array...  [1.42213s]
Computing hash join...  [1.9838s]
Building seed filter...  [0.084156s]
Searching alignments...  [25.2021s]
Processing query block 0, reference block 1, shape 3, index chunk 3.
Building reference seed array...  [3.30904s]
Building query seed array...  [1.08433s]
Computing hash join...  [2.06815s]
Building seed filter...  [0.082552s]
Searching alignments...  [25.3276s]
Processing query block 0, reference block 1, shape 4, index chunk 0.
Building reference seed array...  [3.43154s]
Building query seed array...  [1.07292s]
Computing hash join...  [1.99143s]
Building seed filter...  [0.151833s]
Searching alignments...  [24.8331s]
Processing query block 0, reference block 1, shape 4, index chunk 1.
Building reference seed array...  [4.08213s]
Building query seed array...  [1.27833s]
Computing hash join...  [1.90092s]
Building seed filter...  [0.087537s]
Searching alignments...  [25.1882s]
Processing query block 0, reference block 1, shape 4, index chunk 2.
Building reference seed array...  [4.07981s]
Building query seed array...  [1.26008s]
Computing hash join...  [2.07895s]
Building seed filter...  [0.081648s]
Searching alignments...  [24.653s]
Processing query block 0, reference block 1, shape 4, index chunk 3.
Building reference seed array...  [3.47345s]
Building query seed array...  [1.14652s]
Computing hash join...  [1.96443s]
Building seed filter...  [0.133182s]
Searching alignments...  [24.7236s]
Processing query block 0, reference block 1, shape 5, index chunk 0.
Building reference seed array...  [3.33961s]
Building query seed array...  [1.18045s]
Computing hash join...  [1.90561s]
Building seed filter...  [0.118164s]
Searching alignments...  [25.3876s]
Processing query block 0, reference block 1, shape 5, index chunk 1.
Building reference seed array...  [3.98293s]
Building query seed array...  [1.3907s]
Computing hash join...  [2.25129s]
Building seed filter...  [0.083185s]
Searching alignments...  [25.2207s]
Processing query block 0, reference block 1, shape 5, index chunk 2.
Building reference seed array...  [4.12481s]
Building query seed array...  [1.40875s]
Computing hash join...  [2.10148s]
Building seed filter...  [0.082987s]
Searching alignments...  [24.8354s]
Processing query block 0, reference block 1, shape 5, index chunk 3.
Building reference seed array...  [3.53686s]
Building query seed array...  [1.07252s]
Computing hash join...  [1.91368s]
Building seed filter...  [0.145153s]
Searching alignments...  [25.5776s]
Processing query block 0, reference block 1, shape 6, index chunk 0.
Building reference seed array...  [3.29973s]
Building query seed array...  [1.13397s]
Computing hash join...  [1.90831s]
Building seed filter...  [0.082564s]
Searching alignments...  [25.4154s]
Processing query block 0, reference block 1, shape 6, index chunk 1.
Building reference seed array...  [4.12383s]
Building query seed array...  [1.33265s]
Computing hash join...  [2.26459s]
Building seed filter...  [0.099229s]
Searching alignments...  [24.504s]
Processing query block 0, reference block 1, shape 6, index chunk 2.
Building reference seed array...  [4.10699s]
Building query seed array...  [1.53397s]
Computing hash join...  [1.96973s]
Building seed filter...  [0.120096s]
Searching alignments...  [24.9085s]
Processing query block 0, reference block 1, shape 6, index chunk 3.
Building reference seed array...  [3.24003s]
Building query seed array...  [1.06849s]
Computing hash join...  [2.07478s]
Building seed filter...  [0.136644s]
Searching alignments...  [24.6038s]
Processing query block 0, reference block 1, shape 7, index chunk 0.
Building reference seed array...  [3.38069s]
Building query seed array...  [1.04892s]
Computing hash join...  [1.92846s]
Building seed filter...  [0.137995s]
Searching alignments...  [25.0404s]
Processing query block 0, reference block 1, shape 7, index chunk 1.
Building reference seed array...  [4.14577s]
Building query seed array...  [1.49012s]
Computing hash join...  [2.29084s]
Building seed filter...  [0.081973s]
Searching alignments...  [24.5035s]
Processing query block 0, reference block 1, shape 7, index chunk 2.
Building reference seed array...  [4.33841s]
Building query seed array...  [1.32781s]
Computing hash join...  [2.02001s]
Building seed filter...  [0.082069s]
Searching alignments...  [24.8596s]
Processing query block 0, reference block 1, shape 7, index chunk 3.
Building reference seed array...  [3.18254s]
Building query seed array...  [1.22784s]
Computing hash join...  [2.2104s]
Building seed filter...  [0.083098s]
Searching alignments...  [25.2746s]
Processing query block 0, reference block 1, shape 8, index chunk 0.
Building reference seed array...  [3.3459s]
Building query seed array...  [1.05165s]
Computing hash join...  [2.14079s]
Building seed filter...  [0.154383s]
Searching alignments...  [25.1146s]
Processing query block 0, reference block 1, shape 8, index chunk 1.
Building reference seed array...  [4.07463s]
Building query seed array...  [1.41266s]
Computing hash join...  [1.94768s]
Building seed filter...  [0.088507s]
Searching alignments...  [25.2059s]
Processing query block 0, reference block 1, shape 8, index chunk 2.
Building reference seed array...  [4.15207s]
Building query seed array...  [1.30922s]
Computing hash join...  [1.97651s]
Building seed filter...  [0.109803s]
Searching alignments...  [24.8052s]
Processing query block 0, reference block 1, shape 8, index chunk 3.
Building reference seed array...  [3.50797s]
Building query seed array...  [1.07893s]
Computing hash join...  [2.09525s]
Building seed filter...  [0.135257s]
Searching alignments...  [24.5222s]
Processing query block 0, reference block 1, shape 9, index chunk 0.
Building reference seed array...  [3.37564s]
Building query seed array...  [1.12172s]
Computing hash join...  [1.93675s]
Building seed filter...  [0.128267s]
Searching alignments...  [24.954s]
Processing query block 0, reference block 1, shape 9, index chunk 1.
Building reference seed array...  [4.17318s]
Building query seed array...  [1.44726s]
Computing hash join...  [2.22753s]
Building seed filter...  [0.081952s]
Searching alignments...  [23.9946s]
Processing query block 0, reference block 1, shape 9, index chunk 2.
Building reference seed array...  [4.04596s]
Building query seed array...  [1.30035s]
Computing hash join...  [1.93033s]
Building seed filter...  [0.12518s]
Searching alignments...  [23.9448s]
Processing query block 0, reference block 1, shape 9, index chunk 3.
Building reference seed array...  [3.33076s]
Building query seed array...  [1.14721s]
Computing hash join...  [2.02973s]
Building seed filter...  [0.144589s]
Searching alignments...  [23.9584s]
Processing query block 0, reference block 1, shape 10, index chunk 0.
Building reference seed array...  [3.38026s]
Building query seed array...  [1.06302s]
Computing hash join...  [1.94968s]
Building seed filter...  [0.097127s]
Searching alignments...  [26.0708s]
Processing query block 0, reference block 1, shape 10, index chunk 1.
Building reference seed array...  [4.07836s]
Building query seed array...  [1.24895s]
Computing hash join...  [2.238s]
Building seed filter...  [0.096481s]
Searching alignments...  [25.1042s]
Processing query block 0, reference block 1, shape 10, index chunk 2.
Building reference seed array...  [4.25865s]
Building query seed array...  [1.32057s]
Computing hash join...  [1.97498s]
Building seed filter...  [0.085123s]
Searching alignments...  [25.1753s]
Processing query block 0, reference block 1, shape 10, index chunk 3.
Building reference seed array...  [3.14737s]
Building query seed array...  [1.05528s]
Computing hash join...  [1.99726s]
Building seed filter...  [0.083262s]
Searching alignments...  [25.6486s]
Processing query block 0, reference block 1, shape 11, index chunk 0.
Building reference seed array...  [3.51057s]
Building query seed array...  [1.22815s]
Computing hash join...  [1.99672s]
Building seed filter...  [0.142437s]
Searching alignments...  [24.2577s]
Processing query block 0, reference block 1, shape 11, index chunk 1.
Building reference seed array...  [3.93673s]
Building query seed array...  [1.34821s]
Computing hash join...  [1.9311s]
Building seed filter...  [0.108735s]
Searching alignments...  [24.0567s]
Processing query block 0, reference block 1, shape 11, index chunk 2.
Building reference seed array...  [4.48302s]
Building query seed array...  [1.37542s]
Computing hash join...  [2.29776s]
Building seed filter...  [0.101449s]
Searching alignments...  [23.7373s]
Processing query block 0, reference block 1, shape 11, index chunk 3.
Building reference seed array...  [3.25822s]
Building query seed array...  [1.11946s]
Computing hash join...  [1.8997s]
Building seed filter...  [0.083183s]
Searching alignments...  [24.2588s]
Processing query block 0, reference block 1, shape 12, index chunk 0.
Building reference seed array...  [3.47817s]
Building query seed array...  [1.08087s]
Computing hash join...  [1.9172s]
Building seed filter...  [0.127554s]
Searching alignments...  [24.2086s]
Processing query block 0, reference block 1, shape 12, index chunk 1.
Building reference seed array...  [3.99489s]
Building query seed array...  [1.27275s]
Computing hash join...  [1.88496s]
Building seed filter...  [0.116709s]
Searching alignments...  [23.8916s]
Processing query block 0, reference block 1, shape 12, index chunk 2.
Building reference seed array...  [4.34543s]
Building query seed array...  [1.32196s]
Computing hash join...  [2.15127s]
Building seed filter...  [0.114149s]
Searching alignments...  [23.5736s]
Processing query block 0, reference block 1, shape 12, index chunk 3.
Building reference seed array...  [3.16122s]
Building query seed array...  [1.14421s]
Computing hash join...  [1.88221s]
Building seed filter...  [0.083693s]
Searching alignments...  [24.1487s]
Processing query block 0, reference block 1, shape 13, index chunk 0.
Building reference seed array...  [3.46274s]
Building query seed array...  [1.11473s]
Computing hash join...  [1.94111s]
Building seed filter...  [0.143115s]
Searching alignments...  [25.2237s]
Processing query block 0, reference block 1, shape 13, index chunk 1.
Building reference seed array...  [4.04981s]
Building query seed array...  [1.44847s]
Computing hash join...  [2.07982s]
Building seed filter...  [0.083556s]
Searching alignments...  [25.0042s]
Processing query block 0, reference block 1, shape 13, index chunk 2.
Building reference seed array...  [4.07446s]
Building query seed array...  [1.32817s]
Computing hash join...  [1.99918s]
Building seed filter...  [0.089034s]
Searching alignments...  [24.956s]
Processing query block 0, reference block 1, shape 13, index chunk 3.
Building reference seed array...  [3.40841s]
Building query seed array...  [1.10997s]
Computing hash join...  [2.04546s]
Building seed filter...  [0.134121s]
Searching alignments...  [24.6576s]
Processing query block 0, reference block 1, shape 14, index chunk 0.
Building reference seed array...  [3.23184s]
Building query seed array...  [1.2378s]
Computing hash join...  [1.94186s]
Building seed filter...  [0.095875s]
Searching alignments...  [25.0505s]
Processing query block 0, reference block 1, shape 14, index chunk 1.
Building reference seed array...  [4.15852s]
Building query seed array...  [1.37874s]
Computing hash join...  [2.28782s]
Building seed filter...  [0.08952s]
Searching alignments...  [24.1791s]
Processing query block 0, reference block 1, shape 14, index chunk 2.
Building reference seed array...  [4.05277s]
Building query seed array...  [1.34994s]
Computing hash join...  [1.98714s]
Building seed filter...  [0.084734s]
Searching alignments...  [24.8595s]
Processing query block 0, reference block 1, shape 14, index chunk 3.
Building reference seed array...  [3.5839s]
Building query seed array...  [1.04416s]
Computing hash join...  [2.17469s]
Building seed filter...  [0.130946s]
Searching alignments...  [24.4845s]
Processing query block 0, reference block 1, shape 15, index chunk 0.
Building reference seed array...  [3.46435s]
Building query seed array...  [1.12044s]
Computing hash join...  [2.00182s]
Building seed filter...  [0.114916s]
Searching alignments...  [24.6749s]
Processing query block 0, reference block 1, shape 15, index chunk 1.
Building reference seed array...  [4.15653s]
Building query seed array...  [1.3294s]
Computing hash join...  [2.30346s]
Building seed filter...  [0.08901s]
Searching alignments...  [24.0378s]
Processing query block 0, reference block 1, shape 15, index chunk 2.
Building reference seed array...  [4.26511s]
Building query seed array...  [1.31809s]
Computing hash join...  [1.97108s]
Building seed filter...  [0.094805s]
Searching alignments...  [24.7833s]
Processing query block 0, reference block 1, shape 15, index chunk 3.
Building reference seed array...  [3.22647s]
Building query seed array...  [1.22112s]
Computing hash join...  [2.01673s]
Building seed filter...  [0.083581s]
Searching alignments...  [24.0983s]
Deallocating buffers...  [0.932088s]
Opening temporary output file...  [0.014515s]
Computing alignments...  [3830.69s]
Deallocating reference...  [0.706438s]
Loading reference sequences...  [0.05098s]
Deallocating buffers...  [0.155986s]
Joining output blocks...  [0.092122s]
Deallocating queries...  [0.206446s]
Loading query sequences...  [3.8e-05s]
Closing the input file...  [4e-05s]
Closing the output file...  [0.001099s]
Closing the database file...  [3e-05s]
Deallocating taxonomy...  [0.001815s]
Total time = 19520.1s
Reported 18 pairwise alignments, 70 HSPs.
18 queries aligned.

Generating checksum for /gscratch/srlab/sam/data/P_generosa/genomes/Panopea-generosa-v1.0.fa.
Completed checksum for /gscratch/srlab/sam/data/P_generosa/genomes/Panopea-generosa-v1.0.fa.

Logging program options...
Finished logging system PATH