Sample	command
zr3644_10_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_10_R1.fq.gz --in2 zr3644_10_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_10_R1.fastp-trim.20201206.report.html --json zr3644_10_R1.fastp-trim.20201206.report.json --out1 zr3644_10_R1.fastp-trim.20201206.fq.gz --out2 zr3644_10_R2.fastp-trim.20201206.fq.gz 
zr3644_11_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_11_R1.fq.gz --in2 zr3644_11_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_11_R1.fastp-trim.20201206.report.html --json zr3644_11_R1.fastp-trim.20201206.report.json --out1 zr3644_11_R1.fastp-trim.20201206.fq.gz --out2 zr3644_11_R2.fastp-trim.20201206.fq.gz 
zr3644_12_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_12_R1.fq.gz --in2 zr3644_12_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_12_R1.fastp-trim.20201206.report.html --json zr3644_12_R1.fastp-trim.20201206.report.json --out1 zr3644_12_R1.fastp-trim.20201206.fq.gz --out2 zr3644_12_R2.fastp-trim.20201206.fq.gz 
zr3644_13_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_13_R1.fq.gz --in2 zr3644_13_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_13_R1.fastp-trim.20201206.report.html --json zr3644_13_R1.fastp-trim.20201206.report.json --out1 zr3644_13_R1.fastp-trim.20201206.fq.gz --out2 zr3644_13_R2.fastp-trim.20201206.fq.gz 
zr3644_14_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_14_R1.fq.gz --in2 zr3644_14_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_14_R1.fastp-trim.20201206.report.html --json zr3644_14_R1.fastp-trim.20201206.report.json --out1 zr3644_14_R1.fastp-trim.20201206.fq.gz --out2 zr3644_14_R2.fastp-trim.20201206.fq.gz 
zr3644_15_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_15_R1.fq.gz --in2 zr3644_15_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_15_R1.fastp-trim.20201206.report.html --json zr3644_15_R1.fastp-trim.20201206.report.json --out1 zr3644_15_R1.fastp-trim.20201206.fq.gz --out2 zr3644_15_R2.fastp-trim.20201206.fq.gz 
zr3644_16_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_16_R1.fq.gz --in2 zr3644_16_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_16_R1.fastp-trim.20201206.report.html --json zr3644_16_R1.fastp-trim.20201206.report.json --out1 zr3644_16_R1.fastp-trim.20201206.fq.gz --out2 zr3644_16_R2.fastp-trim.20201206.fq.gz 
zr3644_17_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_17_R1.fq.gz --in2 zr3644_17_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_17_R1.fastp-trim.20201206.report.html --json zr3644_17_R1.fastp-trim.20201206.report.json --out1 zr3644_17_R1.fastp-trim.20201206.fq.gz --out2 zr3644_17_R2.fastp-trim.20201206.fq.gz 
zr3644_18_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_18_R1.fq.gz --in2 zr3644_18_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_18_R1.fastp-trim.20201206.report.html --json zr3644_18_R1.fastp-trim.20201206.report.json --out1 zr3644_18_R1.fastp-trim.20201206.fq.gz --out2 zr3644_18_R2.fastp-trim.20201206.fq.gz 
zr3644_19_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_19_R1.fq.gz --in2 zr3644_19_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_19_R1.fastp-trim.20201206.report.html --json zr3644_19_R1.fastp-trim.20201206.report.json --out1 zr3644_19_R1.fastp-trim.20201206.fq.gz --out2 zr3644_19_R2.fastp-trim.20201206.fq.gz 
zr3644_1_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_1_R1.fq.gz --in2 zr3644_1_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_1_R1.fastp-trim.20201206.report.html --json zr3644_1_R1.fastp-trim.20201206.report.json --out1 zr3644_1_R1.fastp-trim.20201206.fq.gz --out2 zr3644_1_R2.fastp-trim.20201206.fq.gz 
zr3644_20_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_20_R1.fq.gz --in2 zr3644_20_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_20_R1.fastp-trim.20201206.report.html --json zr3644_20_R1.fastp-trim.20201206.report.json --out1 zr3644_20_R1.fastp-trim.20201206.fq.gz --out2 zr3644_20_R2.fastp-trim.20201206.fq.gz 
zr3644_21_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_21_R1.fq.gz --in2 zr3644_21_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_21_R1.fastp-trim.20201206.report.html --json zr3644_21_R1.fastp-trim.20201206.report.json --out1 zr3644_21_R1.fastp-trim.20201206.fq.gz --out2 zr3644_21_R2.fastp-trim.20201206.fq.gz 
zr3644_22_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_22_R1.fq.gz --in2 zr3644_22_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_22_R1.fastp-trim.20201206.report.html --json zr3644_22_R1.fastp-trim.20201206.report.json --out1 zr3644_22_R1.fastp-trim.20201206.fq.gz --out2 zr3644_22_R2.fastp-trim.20201206.fq.gz 
zr3644_23_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_23_R1.fq.gz --in2 zr3644_23_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_23_R1.fastp-trim.20201206.report.html --json zr3644_23_R1.fastp-trim.20201206.report.json --out1 zr3644_23_R1.fastp-trim.20201206.fq.gz --out2 zr3644_23_R2.fastp-trim.20201206.fq.gz 
zr3644_24_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_24_R1.fq.gz --in2 zr3644_24_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_24_R1.fastp-trim.20201206.report.html --json zr3644_24_R1.fastp-trim.20201206.report.json --out1 zr3644_24_R1.fastp-trim.20201206.fq.gz --out2 zr3644_24_R2.fastp-trim.20201206.fq.gz 
zr3644_2_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_2_R1.fq.gz --in2 zr3644_2_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_2_R1.fastp-trim.20201206.report.html --json zr3644_2_R1.fastp-trim.20201206.report.json --out1 zr3644_2_R1.fastp-trim.20201206.fq.gz --out2 zr3644_2_R2.fastp-trim.20201206.fq.gz 
zr3644_3_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_3_R1.fq.gz --in2 zr3644_3_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_3_R1.fastp-trim.20201206.report.html --json zr3644_3_R1.fastp-trim.20201206.report.json --out1 zr3644_3_R1.fastp-trim.20201206.fq.gz --out2 zr3644_3_R2.fastp-trim.20201206.fq.gz 
zr3644_4_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_4_R1.fq.gz --in2 zr3644_4_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_4_R1.fastp-trim.20201206.report.html --json zr3644_4_R1.fastp-trim.20201206.report.json --out1 zr3644_4_R1.fastp-trim.20201206.fq.gz --out2 zr3644_4_R2.fastp-trim.20201206.fq.gz 
zr3644_5_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_5_R1.fq.gz --in2 zr3644_5_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_5_R1.fastp-trim.20201206.report.html --json zr3644_5_R1.fastp-trim.20201206.report.json --out1 zr3644_5_R1.fastp-trim.20201206.fq.gz --out2 zr3644_5_R2.fastp-trim.20201206.fq.gz 
zr3644_6_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_6_R1.fq.gz --in2 zr3644_6_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_6_R1.fastp-trim.20201206.report.html --json zr3644_6_R1.fastp-trim.20201206.report.json --out1 zr3644_6_R1.fastp-trim.20201206.fq.gz --out2 zr3644_6_R2.fastp-trim.20201206.fq.gz 
zr3644_7_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_7_R1.fq.gz --in2 zr3644_7_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_7_R1.fastp-trim.20201206.report.html --json zr3644_7_R1.fastp-trim.20201206.report.json --out1 zr3644_7_R1.fastp-trim.20201206.fq.gz --out2 zr3644_7_R2.fastp-trim.20201206.fq.gz 
zr3644_8_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_8_R1.fq.gz --in2 zr3644_8_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_8_R1.fastp-trim.20201206.report.html --json zr3644_8_R1.fastp-trim.20201206.report.json --out1 zr3644_8_R1.fastp-trim.20201206.fq.gz --out2 zr3644_8_R2.fastp-trim.20201206.fq.gz 
zr3644_9_R1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 zr3644_9_R1.fq.gz --in2 zr3644_9_R2.fq.gz --detect_adapter_for_pe --detect_adapter_for_pe --trim_front1 10 --trim_front2 10 --trim_tail1 10 --trim_tail2 10 --thread 27 --html zr3644_9_R1.fastp-trim.20201206.report.html --json zr3644_9_R1.fastp-trim.20201206.report.json --out1 zr3644_9_R1.fastp-trim.20201206.fq.gz --out2 zr3644_9_R2.fastp-trim.20201206.fq.gz