# BUSCO version is: 3.0.2 # The lineage dataset is: metazoa_odb9 (Creation date: 2016-02-13, number of species: 65, number of BUSCOs: 978) # To reproduce this run: python /gscratch/srlab/programs/busco-v3/scripts/run_BUSCO.py -i /gscratch/srlab/sam/data/L_vannamei/transcriptomes/Trinity_Trimmed_Whiteleg_Shrimp_Transcrimptome_Assmbled_Supplemental_Data_1.fasta -o Trinity_Trimmed_Whiteleg_Shrimp_Transcrimptome_Assmbled_Supplemental_Data_1.fasta -l /gscratch/srlab/sam/data/databases/BUSCO/metazoa_odb9/ -m transcriptome -c 28 --long -z # # Summarized benchmarking in BUSCO notation for file /gscratch/srlab/sam/data/L_vannamei/transcriptomes/Trinity_Trimmed_Whiteleg_Shrimp_Transcrimptome_Assmbled_Supplemental_Data_1.fasta # BUSCO was run in mode: transcriptome C:98.1%[S:72.7%,D:25.4%],F:0.9%,M:1.0%,n:978 959 Complete BUSCOs (C) 711 Complete and single-copy BUSCOs (S) 248 Complete and duplicated BUSCOs (D) 9 Fragmented BUSCOs (F) 10 Missing BUSCOs (M) 978 Total BUSCO groups searched