gannet/Atumefaciens/20201013_201002558-2729-Q7_megan-reads

# C.bairdi NanoPore sequencing reads (quality >= 7) from uninfected muscle sample (201002558-2729)
# extracted via seqtk based on taxonomy assigned by MEGAN6 as FastA files, using the "summarized" setting. This
# setting captures all reads of a given taxonomic assignment level and includes all reads
# assigned to all descendant taxa.

# Files are corresponding FastQ files (_megan.fq) and sequencing read ID list files
# to use with seqtk.

# 20201013_201002558-2729-Q7_<species>-read-id-list (text) or _megan.fq

- *Aquifex.sp*: Aquifex sp. which are a Genus of thermophylic bacteria.

- *Arthroposa*: Phylum that includes crabs.

- *Enterospora_canceria*: Species of microsporidia.

- *Sar*: SAR Supergroup, which includes the Alveolata phylum, which includes Hematodinium sp.