Mon Sep 28 10:52:09 PDT 2020 System PATH: ----------/home/sam/bin /home/sam/.local/bin /home/sam/bin /home/sam/.local/bin /usr/local/sbin /usr/local/bin /usr/sbin /usr/bin /sbin /bin /usr/games /usr/local/games /home/shared/ /home/shared/abacus /home/shared/bin /home/shared/BisSNP /home/shared/bsmap /home/shared/bowtie2-2.3.4.1-linux-x86_64 /home/shared/comet /home/shared/fastqc_0.11.7 /home/shared/igvtools /home/shared/lib /home/shared/macau /home/shared/miniconda3/bin /home/shared/MethylExtract_1.9.1 /home/shared/MSFileReader /home/shared/PBSuite_15.8.24/bin/ /home/shared/pecan /home/shared/pitchfork/bin/ /home/shared/ReAdW /home/shared/RepeatMasker /home/shared/salmon-0.11.3-linux_x86_64/bin /home/shared/samtools-1.8 /home/shared/trimgalore /home/shared/hmmer-2.3 /home/shared/hmmer-3.1b2-linux-intel-x86_64 /home/shared/jellyfish-2.2.6 /home/shared/ncbi-blast-2.6.0+ /home/shared/rmblast_2.6.0 /home/shared/RNAMMER /home/shared/signalp-4.1 /home/shared/tmhmm-2.0c /home/shared/TransDecoder-3.0.1 /home/shared/Trimmomatic-0.36 /home/shared/trinityrnaseq-Trinity-v2.4.0 /home/shared/Trinotate-3.0.2 /snap/bin /home/shared/ /home/shared/