Version MEGAN Community Edition (version 6.19.9, built 11 Sep 2020) Author(s) Daniel H. Huson Copyright (C) 2020 Daniel H. Huson. This program comes with ABSOLUTELY NO WARRANTY. Functional classifications to use: EC, EGGNOG, GTDB, INTERPRO2GO, SEED Loading ncbi.map: 2,259,889 Loading ncbi.tre: 2,259,893 Loading ec.map: 8,081 Loading ec.tre: 8,085 Loading eggnog.map: 30,875 Loading eggnog.tre: 30,986 Loading gtdb.map: 240,103 Loading gtdb.tre: 240,107 Loading interpro2go.map: 12,738 Loading interpro2go.tre: 28,689 Loading seed.map: 978 Loading seed.tre: 979 In DAA file: 20200928_cbai_nanopore_20102558-2729_Q7.blastx.daa Output file: 20200928_cbai_nanopore_20102558-2729_Q7.daa2rma.rma6 Classifications: Taxonomy, SEED, EGGNOG, GTDB, EC, INTERPRO2GO Generating RMA6 file Parsing matches Annotating RMA6 file using FAST mode (accession database and first accession per line) Parsing file 20200928_cbai_nanopore_20102558-2729_Q7.blastx.daa Parsing file: 20200928_cbai_nanopore_20102558-2729_Q7.blastx.daa Input domination filter: MinPercentCoverToStronglyDominate=90.0 and TopPercentScoreToStronglyDominate=90.0 10% 20% 30% 40% 50% 60% 70% 80% 90% 100% (9.4s) Total reads: 6,201 Alignments: 36,539 100% (0.0s) Binning reads: Initializing... Initializing binning... Using 'Interval-Union-LCA' algorithm (51.0 %) for binning: Taxonomy Using Multi-Gene Best-Hit algorithm for binning: SEED Using Multi-Gene Best-Hit algorithm for binning: EGGNOG Using 'Interval-Union-LCA' algorithm (51.0 %) for binning: GTDB Using Multi-Gene Best-Hit algorithm for binning: EC Using Multi-Gene Best-Hit algorithm for binning: INTERPRO2GO Binning reads... Binning reads: Analyzing alignments Total reads: 6,201 Total weight: 4,173,141 With hits: 6,201 Alignments: 36,539 Assig. Taxonomy: 5,853 Assig. SEED: 6 Assig. EGGNOG: 48 Assig. GTDB: 587 Assig. EC: 276 Assig. INTERPRO2GO: 442 MinSupport set to: 2086 Binning reads: Applying min-support & disabled filter to Taxonomy... Min-supp. changes: 185 Binning reads: Applying min-support & disabled filter to GTDB... Min-supp. changes: 35 Binning reads: Writing classification tables Numb. Tax. classes: 240 Numb. SEED classes: 8 Numb. EGG. classes: 43 Numb. GTDB classes: 36 Numb. EC classes: 106 Numb. INT. classes: 179 Binning reads: Syncing Class. Taxonomy: 240 Class. SEED: 8 Class. EGGNOG: 43 Class. GTDB: 36 Class. EC: 106 Class. INTERPRO2GO: 179 100% (351.8s) Total time: 372s Peak memory: 17.5 of 43 G --------------------- Total runtime was: 373 seconds