# hmmsearch :: search profile(s) against a sequence database # HMMER 3.2.1 (June 2018); http://hmmer.org/ # Copyright (C) 2018 Howard Hughes Medical Institute. # Freely distributed under the BSD open source license. # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: /gscratch/srlab/sam/data/databases/BUSCO/metazoa_odb9/hmms/EOG091G0BKX.hmm # target sequence database: /gscratch/scrubbed/samwhite/outputs/20200924_cbai_genome_v1.01_busco/run_cbai_genome_v1.01.fasta/augustus_output/extracted_proteins/EOG091G0BKX.faa.1 # output directed to file: ./tmp/temp_cbai_genome_v1.01.fasta_145855183 # per-dom hits tabular output: /gscratch/scrubbed/samwhite/outputs/20200924_cbai_genome_v1.01_busco/run_cbai_genome_v1.01.fasta/hmmer_output/EOG091G0BKX.out.1 # number of worker threads: 1 # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: EOG091G0BKX [M=336] Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.4e-116 374.2 0.0 7.6e-116 374.0 0.0 1.0 1 g2[contig_3566:3158-19762] Domain annotation for each sequence (and alignments): >> g2[contig_3566:3158-19762] # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 374.0 0.0 3.8e-116 7.6e-116 2 295 .. 11 331 .. 9 379 .. 0.88 Alignments for each domain: == domain 1 score: 374.0 bits; conditional E-value: 3.8e-116 EOG091G0BKX 2 vvvaisggvdsavaalllkkkgyevtgvfmknWdekde.gvCsaekdledaeavckkldiplkevnfvkeYWnevfsellkey 83 vv+++sgg dsavaalllkkkgyevtgvfm+nWdekde g+C+ + d+e+ae+vc++ldip++e nfvkeYWn+vf++l++ey g2[contig_3566:3158-19762] 11 VVLGLSGGGDSAVAALLLKKKGYEVTGVFMRNWDEKDEkGHCTGDADAEHAEWVCQRLDIPFHEANFVKEYWNDVFMYLIDEY 93 99*********************************997579****************************************** PP EOG091G0BKX 84 ekGltPNPDilCNkkiKFdaflkyaie.lgadaiatGHYarts........eekekvkllkaadklkdqtffLsqisqeaLrk 157 ++G+tPNPDi+CNkk+KF++flkya+e +a++iatGHYar+s +++++++l ++ d +kdqtffLsqisq+aL++ g2[contig_3566:3158-19762] 94 KAGFTPNPDIMCNKKVKFSTFLKYAQEnHDAEVIATGHYARSSfgeelehyNVRKGARLWQSFDLIKDQTFFLSQISQKALQH 176 ************************98527899*******************9******************************* PP EOG091G0BKX 158 tlFPlgeltkseVkkiAaeaglekvakkkesmgicfiGkrnfqdfi.eyleekpgkfvdietgkvvgkhkg..tl..Gqraki 235 t+FP+g+++k V+kiA++a+l++va k++s+gicfiG r+fq+fi ey+e++pg+f+d+et++vvg+h+g t G+++ + g2[contig_3566:3158-19762] 177 TMFPIGDYNKGVVRKIAESADLHRVAGKRDSTGICFIGARKFQEFIsEYIEDRPGHFLDLETQQVVGRHRGlrTSgrGSKTGV 259 *********************************************977**********************9443322556666 PP EOG091G0BKX 236 gayfv...vkkdvktndilvasgtdhpalysdllvtekvhwiaeep.......vlecefrfqhp..lvkctv 295 ++ v +++ +l +sgtdhpal++++l+te v wi++ p +lec+frfq++ l+ ct g2[contig_3566:3158-19762] 260 AQQSRvraVARKPYITLLLQVSGTDHPALFASTLFTEPVFWIHSPPselysqgQLECHFRFQNTasLTACTF 331 6554401144455555667799********************9876333333369******98522567765 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (336 nodes) Target sequences: 2 (980 residues searched) Passed MSV filter: 1 (0.5); expected 0.0 (0.02) Passed bias filter: 1 (0.5); expected 0.0 (0.02) Passed Vit filter: 1 (0.5); expected 0.0 (0.001) Passed Fwd filter: 1 (0.5); expected 0.0 (1e-05) Initial search space (Z): 2 [actual number of targets] Domain search space (domZ): 1 [number of targets reported over threshold] # CPU time: 0.00u 0.01s 00:00:00.01 Elapsed: 00:00:00.00 # Mc/sec: 34.15 // [ok]