Version MEGAN Community Edition (version 6.19.9, built 11 Sep 2020) Author(s) Daniel H. Huson Copyright (C) 2020 Daniel H. Huson. This program comes with ABSOLUTELY NO WARRANTY. Functional classifications to use: EC, EGGNOG, GTDB, INTERPRO2GO, SEED Loading ncbi.map: 2,259,889 Loading ncbi.tre: 2,259,893 Loading ec.map: 8,081 Loading ec.tre: 8,085 Loading eggnog.map: 30,875 Loading eggnog.tre: 30,986 Loading gtdb.map: 240,103 Loading gtdb.tre: 240,107 Loading interpro2go.map: 12,738 Loading interpro2go.tre: 28,689 Loading seed.map: 978 Loading seed.tre: 979 In DAA file: 20200917_cbai_diamond_blastx_nanopore_all_Q7.blastx.daa Output file: 20200917_cbai_diamond_blastx_nanopore_all_Q7.daa2rma.rma6 Classifications: Taxonomy, SEED, EGGNOG, GTDB, EC, INTERPRO2GO Generating RMA6 file Parsing matches Annotating RMA6 file using FAST mode (accession database and first accession per line) Parsing file 20200917_cbai_diamond_blastx_nanopore_all_Q7.blastx.daa Parsing file: 20200917_cbai_diamond_blastx_nanopore_all_Q7.blastx.daa Input domination filter: MinPercentCoverToStronglyDominate=90.0 and TopPercentScoreToStronglyDominate=90.0 10% 20% 30% 40% 50% 60% 70% 80% 90% 100% (575.8s) Total reads: 101,650 Alignments: 605,503 100% (0.0s) Binning reads: Initializing... Initializing binning... Using 'Interval-Union-LCA' algorithm (51.0 %) for binning: Taxonomy Using Multi-Gene Best-Hit algorithm for binning: SEED Using Multi-Gene Best-Hit algorithm for binning: EGGNOG Using 'Interval-Union-LCA' algorithm (51.0 %) for binning: GTDB Using Multi-Gene Best-Hit algorithm for binning: EC Using Multi-Gene Best-Hit algorithm for binning: INTERPRO2GO Binning reads... Binning reads: Analyzing alignments Total reads: 101,650 Total weight: 132,236,171 With hits: 101,650 Alignments: 605,503 Assig. Taxonomy: 95,742 Assig. SEED: 112 Assig. EGGNOG: 1,277 Assig. GTDB: 12,300 Assig. EC: 5,472 Assig. INTERPRO2GO: 9,356 MinSupport set to: 66118 Binning reads: Applying min-support & disabled filter to Taxonomy... Min-supp. changes: 838 Binning reads: Applying min-support & disabled filter to GTDB... Min-supp. changes: 187 Binning reads: Writing classification tables Numb. Tax. classes: 332 Numb. SEED classes: 100 Numb. EGG. classes: 547 Numb. GTDB classes: 57 Numb. EC classes: 718 Numb. INT. classes: 1,504 Binning reads: Syncing Class. Taxonomy: 332 Class. SEED: 100 Class. EGGNOG: 547 Class. GTDB: 57 Class. EC: 718 Class. INTERPRO2GO: 1,504 100% (247.9s) Total time: 835s Peak memory: 16.7 of 43 G --------------------- Total runtime was: 836 seconds