FastQCFastQC Report
Wed 19 Aug 2020
5202_R1.fastp-trim.20200819.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename5202_R1.fastp-trim.20200819.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51564276
Sequences flagged as poor quality0
Sequence length15-140
%GC18

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)