diamond v0.9.29.130 | by Benjamin Buchfink <buchfink@gmail.com>
Licensed under the GNU GPL <https://www.gnu.org/licenses/gpl.txt>
Check http://github.com/bbuchfink/diamond for updates.

#CPU threads: 28
Scoring parameters: (Matrix=BLOSUM62 Lambda=0.267 K=0.041 Penalties=11/1)
Temporary directory: 
Opening the database...  [0.155484s]
#Target sequences to report alignments for: 1
Opening the input file...  [0.090249s]
Opening the output file...  [0.000342s]
Loading query sequences...  [10.3655s]
Masking queries...  [7.51702s]
Building query seed set...  [0.111214s]
Algorithm: Double-indexed
Building query histograms...  [1.25129s]
Allocating buffers...  [0.000696s]
Loading reference sequences...  [4.96807s]
Masking reference...  [0.928879s]
Initializing temporary storage...  [0.004278s]
Building reference histograms...  [0.220676s]
Allocating buffers...  [9.6e-05s]
Processing query block 0, reference block 0, shape 0, index chunk 0.
Building reference seed array...  [0.176058s]
Building query seed array...  [0.808426s]
Computing hash join...  [0.334789s]
Building seed filter...  [0.010261s]
Searching alignments...  [0.686799s]
Processing query block 0, reference block 0, shape 0, index chunk 1.
Building reference seed array...  [0.199092s]
Building query seed array...  [0.889777s]
Computing hash join...  [0.356293s]
Building seed filter...  [0.010061s]
Searching alignments...  [0.613371s]
Processing query block 0, reference block 0, shape 0, index chunk 2.
Building reference seed array...  [0.200809s]
Building query seed array...  [0.891493s]
Computing hash join...  [0.357538s]
Building seed filter...  [0.010559s]
Searching alignments...  [0.575638s]
Processing query block 0, reference block 0, shape 0, index chunk 3.
Building reference seed array...  [0.167384s]
Building query seed array...  [0.730806s]
Computing hash join...  [0.34722s]
Building seed filter...  [0.009936s]
Searching alignments...  [0.558681s]
Processing query block 0, reference block 0, shape 1, index chunk 0.
Building reference seed array...  [0.168907s]
Building query seed array...  [0.741362s]
Computing hash join...  [0.350318s]
Building seed filter...  [0.009337s]
Searching alignments...  [0.513369s]
Processing query block 0, reference block 0, shape 1, index chunk 1.
Building reference seed array...  [0.197432s]
Building query seed array...  [0.906067s]
Computing hash join...  [0.351248s]
Building seed filter...  [0.010233s]
Searching alignments...  [0.509221s]
Processing query block 0, reference block 0, shape 1, index chunk 2.
Building reference seed array...  [0.199736s]
Building query seed array...  [0.897445s]
Computing hash join...  [0.343096s]
Building seed filter...  [0.009533s]
Searching alignments...  [0.65729s]
Processing query block 0, reference block 0, shape 1, index chunk 3.
Building reference seed array...  [0.171209s]
Building query seed array...  [0.793943s]
Computing hash join...  [0.363952s]
Building seed filter...  [0.010032s]
Searching alignments...  [0.506501s]
Deallocating buffers...  [0.001735s]
Computing alignments...  [9.30074s]
Deallocating reference...  [0.001213s]
Loading reference sequences...  [4.9e-05s]
Deallocating buffers...  [0.005478s]
Deallocating queries...  [0.008115s]
Loading query sequences...  [2.8e-05s]
Closing the input file...  [3.1e-05s]
Closing the output file...  [0.000602s]
Closing the database file...  [2.3e-05s]
Deallocating taxonomy...  [1e-05s]
Total time = 50.6043s
Reported 143789 pairwise alignments, 147454 HSPs.
143789 queries aligned.