Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content 380820_S1_L001_R1_001 380820_S1_L001_R1_001.fastp-trim.202004143431.fq.gz Conventional base calls Sanger / Illumina 1.9 9150933.0 0.0 15-101 51.0 33.1605850298516 98.2522829092946 pass pass pass pass warn fail pass warn fail warn pass 380820_S1_L001_R2_001 380820_S1_L001_R2_001.fastp-trim.202004143431.fq.gz Conventional base calls Sanger / Illumina 1.9 9150933.0 0.0 15-101 52.0 29.771142154115054 98.24587547521111 pass pass pass pass warn warn pass warn fail warn pass 380820_S1_L002_R1_001 380820_S1_L002_R1_001.fastp-trim.202004143700.fq.gz Conventional base calls Sanger / Illumina 1.9 9172294.0 0.0 15-101 51.0 33.131606374519315 98.25445891725668 pass pass pass pass warn fail pass warn fail warn pass 380820_S1_L002_R2_001 380820_S1_L002_R2_001.fastp-trim.202004143700.fq.gz Conventional base calls Sanger / Illumina 1.9 9172294.0 0.0 15-101 52.0 30.22025879722325 98.24823495627157 pass pass pass pass warn warn pass warn fail warn pass 380821_S2_L001_R1_001 380821_S2_L001_R1_001.fastp-trim.202004143925.fq.gz Conventional base calls Sanger / Illumina 1.9 8628066.0 0.0 15-101 52.0 33.83857428814484 98.1802510551032 pass pass pass pass warn fail pass warn fail warn pass 380821_S2_L001_R2_001 380821_S2_L001_R2_001.fastp-trim.202004143925.fq.gz Conventional base calls Sanger / Illumina 1.9 8628066.0 0.0 15-101 52.0 31.05593119487252 98.17362036868981 pass pass pass pass warn warn pass warn fail warn pass 380821_S2_L002_R1_001 380821_S2_L002_R1_001.fastp-trim.202004144145.fq.gz Conventional base calls Sanger / Illumina 1.9 8614036.0 0.0 15-101 52.0 34.23976967593813 98.18881160933157 pass pass pass pass warn fail pass warn fail warn pass 380821_S2_L002_R2_001 380821_S2_L002_R2_001.fastp-trim.202004144145.fq.gz Conventional base calls Sanger / Illumina 1.9 8614036.0 0.0 15-101 52.0 31.680003322977697 98.1820558911061 pass pass pass pass warn warn pass warn fail warn pass 380822_S3_L001_R1_001 380822_S3_L001_R1_001.fastp-trim.202004144409.fq.gz Conventional base calls Sanger / Illumina 1.9 9369940.0 0.0 15-101 50.0 28.898441186045186 97.65625692373698 pass pass pass pass warn fail pass warn fail warn pass 380822_S3_L001_R2_001 380822_S3_L001_R2_001.fastp-trim.202004144409.fq.gz Conventional base calls Sanger / Illumina 1.9 9369940.0 0.0 15-101 51.0 26.35866779632647 97.65132754318597 pass pass pass pass warn warn pass warn fail warn pass 380822_S3_L002_R1_001 380822_S3_L002_R1_001.fastp-trim.202004144633.fq.gz Conventional base calls Sanger / Illumina 1.9 9327431.0 0.0 15-101 50.0 29.020501311949232 97.66894335642901 pass pass pass pass warn fail pass warn fail warn pass 380822_S3_L002_R2_001 380822_S3_L002_R2_001.fastp-trim.202004144633.fq.gz Conventional base calls Sanger / Illumina 1.9 9327431.0 0.0 15-101 51.0 26.929432120480374 97.66454278782658 pass pass pass pass warn warn pass warn fail warn pass 380823_S4_L001_R1_001 380823_S4_L001_R1_001.fastp-trim.202004144852.fq.gz Conventional base calls Sanger / Illumina 1.9 8760917.0 0.0 15-101 50.0 35.41009786179202 97.89759473808506 pass pass pass pass warn fail pass warn fail warn pass 380823_S4_L001_R2_001 380823_S4_L001_R2_001.fastp-trim.202004144852.fq.gz Conventional base calls Sanger / Illumina 1.9 8760917.0 0.0 15-101 50.0 32.757333149798214 97.89263749445406 pass pass pass pass warn fail pass warn fail warn pass 380823_S4_L002_R1_001 380823_S4_L002_R1_001.fastp-trim.202004145106.fq.gz Conventional base calls Sanger / Illumina 1.9 8777230.0 0.0 15-101 50.0 35.67878892948362 97.91108994523329 pass pass pass pass warn fail pass warn fail warn pass 380823_S4_L002_R2_001 380823_S4_L002_R2_001.fastp-trim.202004145106.fq.gz Conventional base calls Sanger / Illumina 1.9 8777230.0 0.0 15-101 50.0 33.48059320018912 97.90629435482492 pass pass pass pass warn fail pass warn fail warn pass 380824_S5_L001_R1_001 380824_S5_L001_R1_001.fastp-trim.202004145320.fq.gz Conventional base calls Sanger / Illumina 1.9 9861054.0 0.0 15-101 51.0 35.653167648289276 97.99617951590164 pass pass pass pass warn fail pass warn fail warn pass 380824_S5_L001_R2_001 380824_S5_L001_R2_001.fastp-trim.202004145320.fq.gz Conventional base calls Sanger / Illumina 1.9 9861054.0 0.0 15-101 52.0 32.09874547761518 97.98935772991406 pass pass pass pass warn warn pass warn fail warn pass 380824_S5_L002_R1_001 380824_S5_L002_R1_001.fastp-trim.202004145558.fq.gz Conventional base calls Sanger / Illumina 1.9 9824608.0 0.0 15-101 51.0 36.082049685796626 98.01015775896606 pass pass pass pass warn fail pass warn fail warn pass 380824_S5_L002_R2_001 380824_S5_L002_R2_001.fastp-trim.202004145558.fq.gz Conventional base calls Sanger / Illumina 1.9 9824608.0 0.0 15-101 51.0 32.64570603475429 98.00322252043033 pass pass pass pass warn warn pass warn fail warn pass 380825_S6_L001_R1_001 380825_S6_L001_R1_001.fastp-trim.202004145835.fq.gz Conventional base calls Sanger / Illumina 1.9 10184344.0 0.0 15-101 52.0 39.5314198839723 98.10551646723638 pass pass pass pass warn fail pass warn fail warn pass 380825_S6_L001_R2_001 380825_S6_L001_R2_001.fastp-trim.202004145835.fq.gz Conventional base calls Sanger / Illumina 1.9 10184344.0 0.0 15-101 52.0 36.44411201390429 98.09808211505818 pass pass pass pass warn warn pass warn fail warn pass 380825_S6_L002_R1_001 380825_S6_L002_R1_001.fastp-trim.202004140109.fq.gz Conventional base calls Sanger / Illumina 1.9 10191319.0 0.0 15-101 52.0 40.086753840954096 98.11714048004974 pass pass pass pass warn fail pass warn fail warn pass 380825_S6_L002_R2_001 380825_S6_L002_R2_001.fastp-trim.202004140109.fq.gz Conventional base calls Sanger / Illumina 1.9 10191319.0 0.0 15-101 52.0 37.10239664259281 98.10989863039318 pass pass pass pass warn warn pass warn fail warn pass