Sample	command
380820_S1_L001_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380820_S1_L001_R1_001.fastq.gz --in2 380820_S1_L001_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380820_S1_L001_R1_001.fastp-trim.202004143431.report.html --json 380820_S1_L001_R1_001.fastp-trim.202004143431.report.json --out1 380820_S1_L001_R1_001.fastp-trim.202004143431.fq.gz --out2 380820_S1_L001_R2_001.fastp-trim.202004143431.fq.gz 
380820_S1_L002_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380820_S1_L002_R1_001.fastq.gz --in2 380820_S1_L002_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380820_S1_L002_R1_001.fastp-trim.202004143700.report.html --json 380820_S1_L002_R1_001.fastp-trim.202004143700.report.json --out1 380820_S1_L002_R1_001.fastp-trim.202004143700.fq.gz --out2 380820_S1_L002_R2_001.fastp-trim.202004143700.fq.gz 
380821_S2_L001_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380821_S2_L001_R1_001.fastq.gz --in2 380821_S2_L001_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380821_S2_L001_R1_001.fastp-trim.202004143925.report.html --json 380821_S2_L001_R1_001.fastp-trim.202004143925.report.json --out1 380821_S2_L001_R1_001.fastp-trim.202004143925.fq.gz --out2 380821_S2_L001_R2_001.fastp-trim.202004143925.fq.gz 
380821_S2_L002_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380821_S2_L002_R1_001.fastq.gz --in2 380821_S2_L002_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380821_S2_L002_R1_001.fastp-trim.202004144145.report.html --json 380821_S2_L002_R1_001.fastp-trim.202004144145.report.json --out1 380821_S2_L002_R1_001.fastp-trim.202004144145.fq.gz --out2 380821_S2_L002_R2_001.fastp-trim.202004144145.fq.gz 
380822_S3_L001_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380822_S3_L001_R1_001.fastq.gz --in2 380822_S3_L001_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380822_S3_L001_R1_001.fastp-trim.202004144409.report.html --json 380822_S3_L001_R1_001.fastp-trim.202004144409.report.json --out1 380822_S3_L001_R1_001.fastp-trim.202004144409.fq.gz --out2 380822_S3_L001_R2_001.fastp-trim.202004144409.fq.gz 
380822_S3_L002_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380822_S3_L002_R1_001.fastq.gz --in2 380822_S3_L002_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380822_S3_L002_R1_001.fastp-trim.202004144633.report.html --json 380822_S3_L002_R1_001.fastp-trim.202004144633.report.json --out1 380822_S3_L002_R1_001.fastp-trim.202004144633.fq.gz --out2 380822_S3_L002_R2_001.fastp-trim.202004144633.fq.gz 
380823_S4_L001_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380823_S4_L001_R1_001.fastq.gz --in2 380823_S4_L001_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380823_S4_L001_R1_001.fastp-trim.202004144852.report.html --json 380823_S4_L001_R1_001.fastp-trim.202004144852.report.json --out1 380823_S4_L001_R1_001.fastp-trim.202004144852.fq.gz --out2 380823_S4_L001_R2_001.fastp-trim.202004144852.fq.gz 
380823_S4_L002_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380823_S4_L002_R1_001.fastq.gz --in2 380823_S4_L002_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380823_S4_L002_R1_001.fastp-trim.202004145106.report.html --json 380823_S4_L002_R1_001.fastp-trim.202004145106.report.json --out1 380823_S4_L002_R1_001.fastp-trim.202004145106.fq.gz --out2 380823_S4_L002_R2_001.fastp-trim.202004145106.fq.gz 
380824_S5_L001_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380824_S5_L001_R1_001.fastq.gz --in2 380824_S5_L001_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380824_S5_L001_R1_001.fastp-trim.202004145320.report.html --json 380824_S5_L001_R1_001.fastp-trim.202004145320.report.json --out1 380824_S5_L001_R1_001.fastp-trim.202004145320.fq.gz --out2 380824_S5_L001_R2_001.fastp-trim.202004145320.fq.gz 
380824_S5_L002_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380824_S5_L002_R1_001.fastq.gz --in2 380824_S5_L002_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380824_S5_L002_R1_001.fastp-trim.202004145558.report.html --json 380824_S5_L002_R1_001.fastp-trim.202004145558.report.json --out1 380824_S5_L002_R1_001.fastp-trim.202004145558.fq.gz --out2 380824_S5_L002_R2_001.fastp-trim.202004145558.fq.gz 
380825_S6_L001_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380825_S6_L001_R1_001.fastq.gz --in2 380825_S6_L001_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380825_S6_L001_R1_001.fastp-trim.202004145835.report.html --json 380825_S6_L001_R1_001.fastp-trim.202004145835.report.json --out1 380825_S6_L001_R1_001.fastp-trim.202004145835.fq.gz --out2 380825_S6_L001_R2_001.fastp-trim.202004145835.fq.gz 
380825_S6_L002_R1_001	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 380825_S6_L002_R1_001.fastq.gz --in2 380825_S6_L002_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 380825_S6_L002_R1_001.fastp-trim.202004140109.report.html --json 380825_S6_L002_R1_001.fastp-trim.202004140109.report.json --out1 380825_S6_L002_R1_001.fastp-trim.202004140109.fq.gz --out2 380825_S6_L002_R2_001.fastp-trim.202004140109.fq.gz