# BUSCO version is: 3.0.2 # The lineage dataset is: metazoa_odb9 (Creation date: 2016-02-13, number of species: 65, number of BUSCOs: 978) # To reproduce this run: python /gscratch/srlab/programs/busco-v3/scripts/run_BUSCO.py -i /gscratch/srlab/sam/data/Hematodinium/transcriptomes/20200408.hemat.megan.Trinity.fasta -o 20200408.hemat.megan -l /gscratch/srlab/sam/data/databases/BUSCO/metazoa_odb9/ -m transcriptome -c 28 --long -z # # Summarized benchmarking in BUSCO notation for file /gscratch/srlab/sam/data/Hematodinium/transcriptomes/20200408.hemat.megan.Trinity.fasta # BUSCO was run in mode: transcriptome C:25.6%[S:20.7%,D:4.9%],F:11.7%,M:62.7%,n:978 250 Complete BUSCOs (C) 202 Complete and single-copy BUSCOs (S) 48 Complete and duplicated BUSCOs (D) 114 Fragmented BUSCOs (F) 614 Missing BUSCOs (M) 978 Total BUSCO groups searched