Sample command 113_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 113_R1_001.fastq.gz --in2 113_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 113_R1_001.fastp-trim.202003184225.report.html --json 113_R1_001.fastp-trim.202003184225.report.json --out1 113_R1_001.fastp-trim.202003184225.fq.gz --out2 113_R2_001.fastp-trim.202003184225.fq.gz 118_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 118_R1_001.fastq.gz --in2 118_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 118_R1_001.fastp-trim.202003184931.report.html --json 118_R1_001.fastp-trim.202003184931.report.json --out1 118_R1_001.fastp-trim.202003184931.fq.gz --out2 118_R2_001.fastp-trim.202003184931.fq.gz 127_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 127_R1_001.fastq.gz --in2 127_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 127_R1_001.fastp-trim.202003185538.report.html --json 127_R1_001.fastp-trim.202003185538.report.json --out1 127_R1_001.fastp-trim.202003185538.fq.gz --out2 127_R2_001.fastp-trim.202003185538.fq.gz 132_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 132_R1_001.fastq.gz --in2 132_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 132_R1_001.fastp-trim.202003180140.report.html --json 132_R1_001.fastp-trim.202003180140.report.json --out1 132_R1_001.fastp-trim.202003180140.fq.gz --out2 132_R2_001.fastp-trim.202003180140.fq.gz 151_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 151_R1_001.fastq.gz --in2 151_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 151_R1_001.fastp-trim.202003180619.report.html --json 151_R1_001.fastp-trim.202003180619.report.json --out1 151_R1_001.fastp-trim.202003180619.fq.gz --out2 151_R2_001.fastp-trim.202003180619.fq.gz 173_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 173_R1_001.fastq.gz --in2 173_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 173_R1_001.fastp-trim.202003181159.report.html --json 173_R1_001.fastp-trim.202003181159.report.json --out1 173_R1_001.fastp-trim.202003181159.fq.gz --out2 173_R2_001.fastp-trim.202003181159.fq.gz 178_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 178_R1_001.fastq.gz --in2 178_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 178_R1_001.fastp-trim.202003181815.report.html --json 178_R1_001.fastp-trim.202003181815.report.json --out1 178_R1_001.fastp-trim.202003181815.fq.gz --out2 178_R2_001.fastp-trim.202003181815.fq.gz 221_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 221_R1_001.fastq.gz --in2 221_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 221_R1_001.fastp-trim.202003182309.report.html --json 221_R1_001.fastp-trim.202003182309.report.json --out1 221_R1_001.fastp-trim.202003182309.fq.gz --out2 221_R2_001.fastp-trim.202003182309.fq.gz 222_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 222_R1_001.fastq.gz --in2 222_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 222_R1_001.fastp-trim.202003182800.report.html --json 222_R1_001.fastp-trim.202003182800.report.json --out1 222_R1_001.fastp-trim.202003182800.fq.gz --out2 222_R2_001.fastp-trim.202003182800.fq.gz 254_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 254_R1_001.fastq.gz --in2 254_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 254_R1_001.fastp-trim.202003184228.report.html --json 254_R1_001.fastp-trim.202003184228.report.json --out1 254_R1_001.fastp-trim.202003184228.fq.gz --out2 254_R2_001.fastp-trim.202003184228.fq.gz 272_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 272_R1_001.fastq.gz --in2 272_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 272_R1_001.fastp-trim.202003184536.report.html --json 272_R1_001.fastp-trim.202003184536.report.json --out1 272_R1_001.fastp-trim.202003184536.fq.gz --out2 272_R2_001.fastp-trim.202003184536.fq.gz 280_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 280_R1_001.fastq.gz --in2 280_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 280_R1_001.fastp-trim.202003185124.report.html --json 280_R1_001.fastp-trim.202003185124.report.json --out1 280_R1_001.fastp-trim.202003185124.fq.gz --out2 280_R2_001.fastp-trim.202003185124.fq.gz 294_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 294_R1_001.fastq.gz --in2 294_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 294_R1_001.fastp-trim.202003180701.report.html --json 294_R1_001.fastp-trim.202003180701.report.json --out1 294_R1_001.fastp-trim.202003180701.fq.gz --out2 294_R2_001.fastp-trim.202003180701.fq.gz 334_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 334_R1_001.fastq.gz --in2 334_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 334_R1_001.fastp-trim.202003181149.report.html --json 334_R1_001.fastp-trim.202003181149.report.json --out1 334_R1_001.fastp-trim.202003181149.fq.gz --out2 334_R2_001.fastp-trim.202003181149.fq.gz 349_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 349_R1_001.fastq.gz --in2 349_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 349_R1_001.fastp-trim.202003181609.report.html --json 349_R1_001.fastp-trim.202003181609.report.json --out1 349_R1_001.fastp-trim.202003181609.fq.gz --out2 349_R2_001.fastp-trim.202003181609.fq.gz 359_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 359_R1_001.fastq.gz --in2 359_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 359_R1_001.fastp-trim.202003182247.report.html --json 359_R1_001.fastp-trim.202003182247.report.json --out1 359_R1_001.fastp-trim.202003182247.fq.gz --out2 359_R2_001.fastp-trim.202003182247.fq.gz 425_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 425_R1_001.fastq.gz --in2 425_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 425_R1_001.fastp-trim.202003182722.report.html --json 425_R1_001.fastp-trim.202003182722.report.json --out1 425_R1_001.fastp-trim.202003182722.fq.gz --out2 425_R2_001.fastp-trim.202003182722.fq.gz 427_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 427_R1_001.fastq.gz --in2 427_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 427_R1_001.fastp-trim.202003184618.report.html --json 427_R1_001.fastp-trim.202003184618.report.json --out1 427_R1_001.fastp-trim.202003184618.fq.gz --out2 427_R2_001.fastp-trim.202003184618.fq.gz 445_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 445_R1_001.fastq.gz --in2 445_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 445_R1_001.fastp-trim.202003185018.report.html --json 445_R1_001.fastp-trim.202003185018.report.json --out1 445_R1_001.fastp-trim.202003185018.fq.gz --out2 445_R2_001.fastp-trim.202003185018.fq.gz 463_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 463_R1_001.fastq.gz --in2 463_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 463_R1_001.fastp-trim.202003185732.report.html --json 463_R1_001.fastp-trim.202003185732.report.json --out1 463_R1_001.fastp-trim.202003185732.fq.gz --out2 463_R2_001.fastp-trim.202003185732.fq.gz 481_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 481_R1_001.fastq.gz --in2 481_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 481_R1_001.fastp-trim.202003180047.report.html --json 481_R1_001.fastp-trim.202003180047.report.json --out1 481_R1_001.fastp-trim.202003180047.fq.gz --out2 481_R2_001.fastp-trim.202003180047.fq.gz 485_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 485_R1_001.fastq.gz --in2 485_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 485_R1_001.fastp-trim.202003181245.report.html --json 485_R1_001.fastp-trim.202003181245.report.json --out1 485_R1_001.fastp-trim.202003181245.fq.gz --out2 485_R2_001.fastp-trim.202003181245.fq.gz 72_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 72_R1_001.fastq.gz --in2 72_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 72_R1_001.fastp-trim.202003181709.report.html --json 72_R1_001.fastp-trim.202003181709.report.json --out1 72_R1_001.fastp-trim.202003181709.fq.gz --out2 72_R2_001.fastp-trim.202003181709.fq.gz 73_R1_001 /gscratch/srlab/programs/fastp-0.20.0/fastp --in1 73_R1_001.fastq.gz --in2 73_R2_001.fastq.gz --detect_adapter_for_pe --thread 27 --html 73_R1_001.fastp-trim.202003182229.report.html --json 73_R1_001.fastp-trim.202003182229.report.json --out1 73_R1_001.fastp-trim.202003182229.fq.gz --out2 73_R2_001.fastp-trim.202003182229.fq.gz