FastQCFastQC Report
Fri 20 Mar 2020
73_R2_001.fastp-trim.202003182229.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename73_R2_001.fastp-trim.202003182229.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25187159
Sequences flagged as poor quality0
Sequence length15-150
%GC73

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG834917033.148518258847695No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA1227950.4875301736094968No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT1109440.44047841997582976No Hit
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT462660.18368883922160495No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA400380.15896195358912849No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)