FastQCFastQC Report
Fri 20 Mar 2020
72_R1_001.fastp-trim.202003181709.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename72_R1_001.fastp-trim.202003181709.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26062951
Sequences flagged as poor quality0
Sequence length15-150
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGTAGAGACCAGGCTTATTGTTGCAAATCCTCTCCGTGGACAGGTTGCA424550.16289406368449988No Hit
GTATATAATCTTAGTACATTCTCGGCATTGCTCAGAATTCTGTCCGTGTA389730.1495341030261692No Hit
TCTCTACATCGTCCACCAAGGAGAATGCAGAAAAAACCAGTACTTCTGAC359190.13781632018569193No Hit
GTACTAAGATTATATACTAACTTTCACTGCTTTCAAACGTTTTTATTGAG305370.11716631781259151No Hit
GATTATATACTAACTTTCACTGCTTTCAAACGTTTTTATTGAGTCATGAG301890.11583108911957055No Hit
TCTTAGTACATTCTCGGCATTGCTCAGAATTCTGTCCGTGTAGCATGGCA300940.11546658703383206No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT294050.1128229876962129No Hit
GTACATCATATTATATTAGAATAACATTCAAGTGCAGCATCAACTGTTAA261060.10016517316093639No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)