FastQCFastQC Report
Fri 20 Mar 2020
481_R2_001.fastp-trim.202003180047.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename481_R2_001.fastp-trim.202003180047.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48708674
Sequences flagged as poor quality0
Sequence length15-150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA35960307.3827302299381No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT30887486.3412689082852065No Hit
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT1144530.2349745755755946No Hit
GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA989800.20320815959802152No Hit
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG781510.1604457555136894No Hit
GTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT765870.1572348284414394No Hit
CACACACACACACACACACACACACACACACACACACACACACCT678240.1392441929336857No Hit
CACACACACACACACACACACACACACACACACACACACACCT675450.13867139967719097No Hit
CACACACACACACACACACACACACACACACACACACACACACACCT674560.13848868068139156No Hit
CACACACACACACACACACACACACACACACACACACACCT664900.1365054610191195No Hit
CACACACACACACACACACACACACACACACACACACACACACACACCT664600.13644387034637814No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT633910.13014314452493614No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT631300.12960730567208623No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT621120.12751732884372916No Hit
CACACACACACACACACACACACACACACACACACACCT618810.1270430806636206No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT602730.12374182060468326No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT600290.12324088313305348No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT583130.1197178966522472No Hit
CACACACACACACACACACACACACACACACACACCT524940.10777135916284644No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCT520630.10688650649779545No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACCTGT519890.10673458283836673No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACACCTGT519630.10668120425532421No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)