FastQCFastQC Report
Fri 20 Mar 2020
359_R1_001.fastp-trim.202003182247.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename359_R1_001.fastp-trim.202003182247.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27021012
Sequences flagged as poor quality0
Sequence length15-150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATATAATCTTAGTACATTCTCGGCATTGCTCAGAATTCTGTCCGTGTA449220.16624839957881665No Hit
TCTTAGTACATTCTCGGCATTGCTCAGAATTCTGTCCGTGTAGCATGGCA362690.13422517261751707No Hit
GTCCAGACCCTGCCTGGATTCACCGGTGGTTCCCAGCCTTTCATTGGCGG354910.1313459318252033No Hit
GTCCAGACCCTGCCTGGATTCACCGGTGGTTCCGAGCCTTTCATTGGCGG282860.10468149749535656No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.8)