Sample	command
Meth1	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth1_R1_001.fastq.gz --in2 Meth1_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth1.fastp-trim.202003061245.report.html --json Meth1.fastp-trim.202003061245.report.json --out1 Meth1.fastp-trim.202003061245_R1_001.fastq.gz --out2 Meth1.fastp-trim.202003061245_R2_001.fastq.gz 
Meth10	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth10_R1_001.fastq.gz --in2 Meth10_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth10.fastp-trim.202003063900.report.html --json Meth10.fastp-trim.202003063900.report.json --out1 Meth10.fastp-trim.202003063900_R1_001.fastq.gz --out2 Meth10.fastp-trim.202003063900_R2_001.fastq.gz 
Meth11	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth11_R1_001.fastq.gz --in2 Meth11_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth11.fastp-trim.202003065734.report.html --json Meth11.fastp-trim.202003065734.report.json --out1 Meth11.fastp-trim.202003065734_R1_001.fastq.gz --out2 Meth11.fastp-trim.202003065734_R2_001.fastq.gz 
Meth12	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth12_R1_001.fastq.gz --in2 Meth12_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth12.fastp-trim.202003060645.report.html --json Meth12.fastp-trim.202003060645.report.json --out1 Meth12.fastp-trim.202003060645_R1_001.fastq.gz --out2 Meth12.fastp-trim.202003060645_R2_001.fastq.gz 
Meth13	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth13_R1_001.fastq.gz --in2 Meth13_R2_001.fastq.gz --detect_adapter_for_pe --trim_tail1 2 --trim_front2 2 --thread 27 --html Meth13.fastp-trim.202003062817.report.html --json Meth13.fastp-trim.202003062817.report.json --out1 Meth13.fastp-trim.202003062817_R1_001.fastq.gz --out2 Meth13.fastp-trim.202003062817_R2_001.fastq.gz 
Meth14	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth14_R1_001.fastq.gz --in2 Meth14_R2_001.fastq.gz --detect_adapter_for_pe --trim_tail1 2 --trim_front2 2 --thread 27 --html Meth14.fastp-trim.202003064415.report.html --json Meth14.fastp-trim.202003064415.report.json --out1 Meth14.fastp-trim.202003064415_R1_001.fastq.gz --out2 Meth14.fastp-trim.202003064415_R2_001.fastq.gz 
Meth15	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth15_R1_001.fastq.gz --in2 Meth15_R2_001.fastq.gz --detect_adapter_for_pe --trim_tail1 2 --trim_front2 2 --thread 27 --html Meth15.fastp-trim.202003065503.report.html --json Meth15.fastp-trim.202003065503.report.json --out1 Meth15.fastp-trim.202003065503_R1_001.fastq.gz --out2 Meth15.fastp-trim.202003065503_R2_001.fastq.gz 
Meth16	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth16_R1_001.fastq.gz --in2 Meth16_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth16.fastp-trim.202003062412.report.html --json Meth16.fastp-trim.202003062412.report.json --out1 Meth16.fastp-trim.202003062412_R1_001.fastq.gz --out2 Meth16.fastp-trim.202003062412_R2_001.fastq.gz 
Meth17	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth17_R1_001.fastq.gz --in2 Meth17_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth17.fastp-trim.202003063731.report.html --json Meth17.fastp-trim.202003063731.report.json --out1 Meth17.fastp-trim.202003063731_R1_001.fastq.gz --out2 Meth17.fastp-trim.202003063731_R2_001.fastq.gz 
Meth18	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth18_R1_001.fastq.gz --in2 Meth18_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth18.fastp-trim.202003065117.report.html --json Meth18.fastp-trim.202003065117.report.json --out1 Meth18.fastp-trim.202003065117_R1_001.fastq.gz --out2 Meth18.fastp-trim.202003065117_R2_001.fastq.gz 
Meth2	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth2_R1_001.fastq.gz --in2 Meth2_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth2.fastp-trim.202003062630.report.html --json Meth2.fastp-trim.202003062630.report.json --out1 Meth2.fastp-trim.202003062630_R1_001.fastq.gz --out2 Meth2.fastp-trim.202003062630_R2_001.fastq.gz 
Meth3	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth3_R1_001.fastq.gz --in2 Meth3_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth3.fastp-trim.202003064031.report.html --json Meth3.fastp-trim.202003064031.report.json --out1 Meth3.fastp-trim.202003064031_R1_001.fastq.gz --out2 Meth3.fastp-trim.202003064031_R2_001.fastq.gz 
Meth4	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth4_R1_001.fastq.gz --in2 Meth4_R2_001.fastq.gz --detect_adapter_for_pe --trim_tail1 2 --trim_front2 2 --thread 27 --html Meth4.fastp-trim.202003062011.report.html --json Meth4.fastp-trim.202003062011.report.json --out1 Meth4.fastp-trim.202003062011_R1_001.fastq.gz --out2 Meth4.fastp-trim.202003062011_R2_001.fastq.gz 
Meth5	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth5_R1_001.fastq.gz --in2 Meth5_R2_001.fastq.gz --detect_adapter_for_pe --trim_tail1 2 --trim_front2 2 --thread 27 --html Meth5.fastp-trim.202003064408.report.html --json Meth5.fastp-trim.202003064408.report.json --out1 Meth5.fastp-trim.202003064408_R1_001.fastq.gz --out2 Meth5.fastp-trim.202003064408_R2_001.fastq.gz 
Meth6	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth6_R1_001.fastq.gz --in2 Meth6_R2_001.fastq.gz --detect_adapter_for_pe --trim_tail1 2 --trim_front2 2 --thread 27 --html Meth6.fastp-trim.202003062949.report.html --json Meth6.fastp-trim.202003062949.report.json --out1 Meth6.fastp-trim.202003062949_R1_001.fastq.gz --out2 Meth6.fastp-trim.202003062949_R2_001.fastq.gz 
Meth7	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth7_R1_001.fastq.gz --in2 Meth7_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth7.fastp-trim.202003065422.report.html --json Meth7.fastp-trim.202003065422.report.json --out1 Meth7.fastp-trim.202003065422_R1_001.fastq.gz --out2 Meth7.fastp-trim.202003065422_R2_001.fastq.gz 
Meth8	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth8_R1_001.fastq.gz --in2 Meth8_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth8.fastp-trim.202003060943.report.html --json Meth8.fastp-trim.202003060943.report.json --out1 Meth8.fastp-trim.202003060943_R1_001.fastq.gz --out2 Meth8.fastp-trim.202003060943_R2_001.fastq.gz 
Meth9	/gscratch/srlab/programs/fastp-0.20.0/fastp --in1 Meth9_R1_001.fastq.gz --in2 Meth9_R2_001.fastq.gz --detect_adapter_for_pe --trim_front1 10 --trim_tail1 10 --trim_front2 10 --trim_tail2 10 --thread 27 --html Meth9.fastp-trim.202003062409.report.html --json Meth9.fastp-trim.202003062409.report.json --out1 Meth9.fastp-trim.202003062409_R1_001.fastq.gz --out2 Meth9.fastp-trim.202003062409_R2_001.fastq.gz