# BUSCO version is: 3.0.2 # The lineage dataset is: metazoa_odb9 (Creation date: 2016-02-13, number of species: 65, number of BUSCOs: 978) # To reproduce this run: python /gscratch/srlab/programs/busco-v3/scripts/run_BUSCO.py -i /gscratch/srlab/sam/data/Hematodinium/transcriptomes/20200122.hemat.megan.Trinity.fasta -o 20200331.hemat.megan -l /gscratch/srlab/sam/data/databases/BUSCO/metazoa_odb9/ -m transcriptome -c 28 --long -z # # Summarized benchmarking in BUSCO notation for file /gscratch/srlab/sam/data/Hematodinium/transcriptomes/20200122.hemat.megan.Trinity.fasta # BUSCO was run in mode: transcriptome C:25.1%[S:19.2%,D:5.9%],F:9.5%,M:65.4%,n:978 246 Complete BUSCOs (C) 188 Complete and single-copy BUSCOs (S) 58 Complete and duplicated BUSCOs (D) 93 Fragmented BUSCOs (F) 639 Missing BUSCOs (M) 978 Total BUSCO groups searched