/gannet/web/Atumefaciens/20191029_pgen_v074.a4_repeats_counts

Individual GFFs for each category of repeat element/transposon identified in
the Panopea-generosa-vv0.74.a4 annotation.

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FILES

- Panopea-generosa-vv0.74.a4.repeats.DNA.gff3: GFF file with all DNA transposon positions.

- Panopea-generosa-vv0.74.a4.repeats.LINE.gff3: GFF file with all Long Interspersed Nuclear Elements positions.

- Panopea-generosa-vv0.74.a4.repeats.LTR.gff3: GFF file with all Long Terminal Repeat positions.

- Panopea-generosa-vv0.74.a4.repeats.RC.gff3: GFF file with all Rolling Circle transposon positions.

- Panopea-generosa-vv0.74.a4.repeats.Simple_repeat.gff3: GFF file with all simple repeat positions.

- Panopea-generosa-vv0.74.a4.repeats.SINE.gff3: GFF file with all Short Interspersed Nuclear Elements positions.

- Panopea-generosa-vv0.74.a4.repeats.Unknown.gff3: GFF file with all uncategorized repeats positions.

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Notebook:

https://robertslab.github.io/sams-notebook/2019/10/29/Genome-Feature-Counts-Panopea-generosa-vv0.74.a4.html