Basic Statistics
Measure | Value |
---|---|
Filename | 329776_S3_L001_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 25206233 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCAACCGAACATCTCGT | 142352 | 0.5647492031038513 | TruSeq Adapter, Index 6 (97% over 37bp) |
GTGCTTCACAATTTACTCATGACTCAATAAAAACGTTTGAAAGCAGTGAA | 45515 | 0.1805704168488802 | No Hit |
CTTCACAATTTACTCATGACTCAATAAAAACGTTTGAAAGCAGTGAAAGT | 44965 | 0.17838841686498733 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCAACCGAACATCGCGT | 41455 | 0.1644632896950528 | TruSeq Adapter, Index 6 (97% over 37bp) |
CTCGGCATTGCTCAGAATTCTGTCCGTGTAGCATGGCAGGTCCTTGTTAG | 37805 | 0.1499827443474001 | No Hit |
GTGAAAGTTAGTATATAATCTTAGTACATTCTCGGCATTGCTCAGAATTC | 33066 | 0.13118183903163952 | No Hit |
GTCGTGTGGAGCCAATGCCGCCGCCAAGGTTAGGCTGGGAAATGAATGGC | 31894 | 0.1265321954295987 | No Hit |
GCTTCACAATTTACTCATGACTCAATAAAAACGTTTGAAAGCAGTGAAAG | 31872 | 0.126444915430243 | No Hit |
GCTACCTTTGCACGGTCAAAATACCGCGGCTCTTAAACAATCCTATGTCA | 27100 | 0.10751309011544881 | No Hit |