# /gscratch/srlab/programs/stringtie-1.3.6.Linux_x86_64/stringtie Geoduck-heart-RNA-2.sorted.bam -p 28 -o Geoduck-heart-RNA-2.gtf -G /gscratch/srlab/sam/data/P_generosa/genomes/Pgenerosa_v074_genome_snap02.all.renamed.putative_function.domain_added.gff -C Geoduck-heart-RNA-2.cov_refs.gtf # StringTie version 1.3.6 PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 49635638 49635851 1000 . . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "2.822430"; FPKM "6559.397426"; TPM "14445.996143"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 49635638 49635851 1000 . . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "2.822430"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 28112469 28112689 1000 . . gene_id "STRG.2"; transcript_id "STRG.2.1"; cov "2.723982"; FPKM "6330.601829"; TPM "13942.111395"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 28112469 28112689 1000 . . gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "1"; cov "2.723982"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 28112769 28113163 1000 . . gene_id "STRG.3"; transcript_id "STRG.3.1"; cov "4.053164"; FPKM "9419.653812"; TPM "20745.241338"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 28112769 28113163 1000 . . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "1"; cov "4.053164"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 28741741 28741968 1000 . . gene_id "STRG.4"; transcript_id "STRG.4.1"; cov "2.640351"; FPKM "6136.241307"; TPM "13514.064250"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 28741741 28741968 1000 . . gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "1"; cov "2.640351"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 34076416 34076795 1000 . . gene_id "STRG.5"; transcript_id "STRG.5.1"; cov "2.544737"; FPKM "5914.031996"; TPM "13024.684717"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 34076416 34076795 1000 . . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "1"; cov "2.544737"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 34076928 34077377 1000 . . gene_id "STRG.6"; transcript_id "STRG.6.1"; cov "3.331111"; FPKM "7741.584705"; TPM "17049.569576"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 34076928 34077377 1000 . . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "1"; cov "3.331111"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 34077527 34078024 1000 - . gene_id "STRG.7"; transcript_id "STRG.7.1"; cov "3.517510"; FPKM "8174.780611"; TPM "18003.612452"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 34077527 34077599 1000 - . gene_id "STRG.7"; transcript_id "STRG.7.1"; exon_number "1"; cov "3.726027"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 34077841 34078024 1000 - . gene_id "STRG.7"; transcript_id "STRG.7.1"; exon_number "2"; cov "3.434783"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 34122031 34124167 1000 + . gene_id "STRG.8"; transcript_id "STRG.8.1"; cov "4.599156"; FPKM "10688.552782"; TPM "23539.783037"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 34122031 34122087 1000 + . gene_id "STRG.8"; transcript_id "STRG.8.1"; exon_number "1"; cov "1.947368"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 34122627 34122749 1000 + . gene_id "STRG.8"; transcript_id "STRG.8.1"; exon_number "2"; cov "5.975610"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 34124111 34124167 1000 + . gene_id "STRG.8"; transcript_id "STRG.8.1"; exon_number "3"; cov "4.280702"; PGA_scaffold3__111_contigs__length_57743597 StringTie transcript 4863041 4863300 1000 . . gene_id "STRG.9"; transcript_id "STRG.9.1"; cov "5.800000"; FPKM "13479.344065"; TPM "29686.042746"; PGA_scaffold3__111_contigs__length_57743597 StringTie exon 4863041 4863300 1000 . . gene_id "STRG.9"; transcript_id "STRG.9.1"; exon_number "1"; cov "5.800000"; PGA_scaffold3__111_contigs__length_57743597 StringTie transcript 51938404 51938674 1000 . . gene_id "STRG.10"; transcript_id "STRG.10.1"; cov "2.723247"; FPKM "6328.893670"; TPM "13938.349457"; PGA_scaffold3__111_contigs__length_57743597 StringTie exon 51938404 51938674 1000 . . gene_id "STRG.10"; transcript_id "STRG.10.1"; exon_number "1"; cov "2.723247"; PGA_scaffold4__129_contigs__length_65288255 StringTie transcript 1990272 1990540 1000 . . gene_id "STRG.11"; transcript_id "STRG.11.1"; cov "4.460967"; FPKM "10367.398113"; TPM "22832.492595"; PGA_scaffold4__129_contigs__length_65288255 StringTie exon 1990272 1990540 1000 . . gene_id "STRG.11"; transcript_id "STRG.11.1"; exon_number "1"; cov "4.460967"; PGA_scaffold4__129_contigs__length_65288255 StringTie transcript 55807566 55807777 1000 . . gene_id "STRG.12"; transcript_id "STRG.12.1"; cov "2.792453"; FPKM "6489.730133"; TPM "14292.565366"; PGA_scaffold4__129_contigs__length_65288255 StringTie exon 55807566 55807777 1000 . . gene_id "STRG.12"; transcript_id "STRG.12.1"; exon_number "1"; cov "2.792453"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 2908169 2908381 1000 . . gene_id "STRG.13"; transcript_id "STRG.13.1"; cov "2.826291"; FPKM "6568.370486"; TPM "14465.757834"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 2908169 2908381 1000 . . gene_id "STRG.13"; transcript_id "STRG.13.1"; exon_number "1"; cov "2.826291"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 12275352 12275606 1000 . . gene_id "STRG.14"; transcript_id "STRG.14.1"; cov "6.415686"; FPKM "14910.213622"; TPM "32837.298076"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 12275352 12275606 1000 . . gene_id "STRG.14"; transcript_id "STRG.14.1"; exon_number "1"; cov "6.415686"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 12275829 12276220 1000 . . gene_id "STRG.15"; transcript_id "STRG.15.1"; cov "3.354592"; FPKM "7796.155132"; TPM "17169.751984"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 12275829 12276220 1000 . . gene_id "STRG.15"; transcript_id "STRG.15.1"; exon_number "1"; cov "3.354592"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 12647122 12647329 1000 . . gene_id "STRG.16"; transcript_id "STRG.16.1"; cov "2.923077"; FPKM "6793.303554"; TPM "14961.135995"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 12647122 12647329 1000 . . gene_id "STRG.16"; transcript_id "STRG.16.1"; exon_number "1"; cov "2.923077"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 25648388 25649027 1000 . . gene_id "STRG.17"; transcript_id "STRG.17.1"; cov "3.714062"; FPKM "8631.572341"; TPM "19009.621258"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 25648388 25649027 1000 . . gene_id "STRG.17"; transcript_id "STRG.17.1"; exon_number "1"; cov "3.714062"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 25653335 25653678 1000 . . gene_id "STRG.18"; transcript_id "STRG.18.1"; cov "2.784884"; FPKM "6472.139589"; TPM "14253.825081"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 25653335 25653678 1000 . . gene_id "STRG.18"; transcript_id "STRG.18.1"; exon_number "1"; cov "2.784884"; PGA_scaffold6__104_contigs__length_61759565 StringTie transcript 4913966 4914205 1000 . . gene_id "STRG.19"; transcript_id "STRG.19.1"; cov "2.591667"; FPKM "6023.098482"; TPM "13264.885749"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 4913966 4914205 1000 . . gene_id "STRG.19"; transcript_id "STRG.19.1"; exon_number "1"; cov "2.591667"; PGA_scaffold6__104_contigs__length_61759565 StringTie transcript 37263531 37266477 1000 - . gene_id "STRG.20"; transcript_id "STRG.20.1"; cov "2.677647"; FPKM "6222.918138"; TPM "13704.955742"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 37263531 37263683 1000 - . gene_id "STRG.20"; transcript_id "STRG.20.1"; exon_number "1"; cov "1.993464"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 37264743 37264841 1000 - . gene_id "STRG.20"; transcript_id "STRG.20.1"; exon_number "2"; cov "4.747475"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 37266305 37266477 1000 - . gene_id "STRG.20"; transcript_id "STRG.20.1"; exon_number "3"; cov "2.098266"; PGA_scaffold6__104_contigs__length_61759565 StringTie transcript 50997738 50997963 1000 . . gene_id "STRG.21"; transcript_id "STRG.21.1"; cov "5.327434"; FPKM "12381.088943"; TPM "27267.316112"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 50997738 50997963 1000 . . gene_id "STRG.21"; transcript_id "STRG.21.1"; exon_number "1"; cov "5.327434"; PGA_scaffold7__69_contigs__length_43120122 StringTie transcript 21919079 21927318 1000 - . gene_id "STRG.22"; transcript_id "STRG.22.1"; cov "2.946342"; FPKM "6847.371992"; TPM "15080.212855"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 21919079 21919177 1000 - . gene_id "STRG.22"; transcript_id "STRG.22.1"; exon_number "1"; cov "2.898990"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 21927213 21927318 1000 - . gene_id "STRG.22"; transcript_id "STRG.22.1"; exon_number "2"; cov "2.990566"; PGA_scaffold7__69_contigs__length_43120122 StringTie transcript 29533826 29534025 1000 . . gene_id "STRG.23"; transcript_id "STRG.23.1"; cov "3.020000"; FPKM "7018.555013"; TPM "15457.215361"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 29533826 29534025 1000 . . gene_id "STRG.23"; transcript_id "STRG.23.1"; exon_number "1"; cov "3.020000"; PGA_scaffold7__69_contigs__length_43120122 StringTie transcript 29772672 29777292 1000 - . gene_id "STRG.24"; transcript_id "STRG.24.1"; cov "3.323529"; FPKM "7723.963949"; TPM "17010.762752"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 29772672 29772765 1000 - . gene_id "STRG.24"; transcript_id "STRG.24.1"; exon_number "1"; cov "1.553192"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 29773225 29773325 1000 - . gene_id "STRG.24"; transcript_id "STRG.24.1"; exon_number "2"; cov "3.702970"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 29775705 29775874 1000 - . gene_id "STRG.24"; transcript_id "STRG.24.1"; exon_number "3"; cov "4.258823"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 29776580 29776658 1000 - . gene_id "STRG.24"; transcript_id "STRG.24.1"; exon_number "4"; cov "3.063291"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 29777261 29777292 1000 - . gene_id "STRG.24"; transcript_id "STRG.24.1"; exon_number "5"; cov "3.000000"; PGA_scaffold9__45_contigs__length_38581958 StringTie transcript 9800829 9801031 1000 . . gene_id "STRG.25"; transcript_id "STRG.25.1"; cov "6.694582"; FPKM "15558.374854"; TPM "34264.766796"; PGA_scaffold9__45_contigs__length_38581958 StringTie exon 9800829 9801031 1000 . . gene_id "STRG.25"; transcript_id "STRG.25.1"; exon_number "1"; cov "6.694582"; PGA_scaffold10__49_contigs__length_53961475 StringTie transcript 25488379 25494790 1000 + . gene_id "STRG.26"; transcript_id "STRG.26.1"; cov "3.509804"; FPKM "8156.871675"; TPM "17964.170961"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 25488379 25488601 1000 + . gene_id "STRG.26"; transcript_id "STRG.26.1"; exon_number "1"; cov "5.205531"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 25492178 25492324 1000 + . gene_id "STRG.26"; transcript_id "STRG.26.1"; exon_number "2"; cov "2.425170"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 25493927 25494052 1000 + . gene_id "STRG.26"; transcript_id "STRG.26.1"; exon_number "3"; cov "3.067460"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 25494692 25494790 1000 + . gene_id "STRG.26"; transcript_id "STRG.26.1"; exon_number "4"; cov "1.863636"; PGA_scaffold10__49_contigs__length_53961475 StringTie transcript 37153060 37153479 1000 . . gene_id "STRG.27"; transcript_id "STRG.27.1"; cov "3.576190"; FPKM "8311.154388"; TPM "18303.953312"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 37153060 37153479 1000 . . gene_id "STRG.27"; transcript_id "STRG.27.1"; exon_number "1"; cov "3.576190"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 14153908 14156693 1000 + . gene_id "STRG.28"; transcript_id "STRG.28.1"; cov "4.467168"; FPKM "10381.809391"; TPM "22864.231069"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 14153908 14153995 1000 + . gene_id "STRG.28"; transcript_id "STRG.28.1"; exon_number "1"; cov "3.306818"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 14155167 14155253 1000 + . gene_id "STRG.28"; transcript_id "STRG.28.1"; exon_number "2"; cov "6.494253"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 14156553 14156693 1000 + . gene_id "STRG.28"; transcript_id "STRG.28.1"; exon_number "3"; cov "3.940603"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 27133403 27133678 1000 . . gene_id "STRG.29"; transcript_id "STRG.29.1"; cov "3.800725"; FPKM "8832.979306"; TPM "19453.187037"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 27133403 27133678 1000 . . gene_id "STRG.29"; transcript_id "STRG.29.1"; exon_number "1"; cov "3.800725"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 27659877 27660107 1000 . . gene_id "STRG.30"; transcript_id "STRG.30.1"; cov "2.536797"; FPKM "5895.579239"; TPM "12984.045548"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 27659877 27660107 1000 . . gene_id "STRG.30"; transcript_id "STRG.30.1"; exon_number "1"; cov "2.536797"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 28419451 28419656 1000 . . gene_id "STRG.31"; transcript_id "STRG.31.1"; cov "4.077670"; FPKM "9476.606365"; TPM "20870.669987"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 28419451 28419656 1000 . . gene_id "STRG.31"; transcript_id "STRG.31.1"; exon_number "1"; cov "4.077670"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 27659257 27659709 1000 - . gene_id "STRG.32"; transcript_id "STRG.32.1"; cov "2.891803"; FPKM "6720.622001"; TPM "14801.066805"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 27659257 27659510 1000 - . gene_id "STRG.32"; transcript_id "STRG.32.1"; exon_number "1"; cov "2.814961"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 27659659 27659709 1000 - . gene_id "STRG.32"; transcript_id "STRG.32.1"; exon_number "2"; cov "3.274510"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 45726039 45727307 1000 - . gene_id "STRG.33"; transcript_id "STRG.33.1"; cov "2.618217"; FPKM "6084.801341"; TPM "13400.776169"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 45726039 45726466 1000 - . gene_id "STRG.33"; transcript_id "STRG.33.1"; exon_number "1"; cov "2.850467"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 45727220 45727307 1000 - . gene_id "STRG.33"; transcript_id "STRG.33.1"; exon_number "2"; cov "1.488636"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 47552360 47552684 1000 . . gene_id "STRG.34"; transcript_id "STRG.34.1"; cov "2.744615"; FPKM "6378.553433"; TPM "14047.716933"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 47552360 47552684 1000 . . gene_id "STRG.34"; transcript_id "STRG.34.1"; exon_number "1"; cov "2.744615"; PGA_scaffold12__71_contigs__length_50438331 StringTie transcript 13297356 13300267 1000 + . gene_id "STRG.35"; transcript_id "STRG.35.1"; cov "2.917476"; FPKM "6780.286691"; TPM "14932.468491"; PGA_scaffold12__71_contigs__length_50438331 StringTie exon 13297356 13297372 1000 + . gene_id "STRG.35"; transcript_id "STRG.35.1"; exon_number "1"; cov "2.000000"; PGA_scaffold12__71_contigs__length_50438331 StringTie exon 13298603 13298718 1000 + . gene_id "STRG.35"; transcript_id "STRG.35.1"; exon_number "2"; cov "3.568965"; PGA_scaffold12__71_contigs__length_50438331 StringTie exon 13300195 13300267 1000 + . gene_id "STRG.35"; transcript_id "STRG.35.1"; exon_number "3"; cov "2.095891"; PGA_scaffold12__71_contigs__length_50438331 StringTie transcript 28628536 28629377 1000 . . gene_id "STRG.36"; transcript_id "STRG.36.1"; cov "2.915677"; FPKM "6776.105770"; TPM "14923.260699"; PGA_scaffold12__71_contigs__length_50438331 StringTie exon 28628536 28629377 1000 . . gene_id "STRG.36"; transcript_id "STRG.36.1"; exon_number "1"; cov "2.915677"; PGA_scaffold12__71_contigs__length_50438331 StringTie transcript 37910949 37912037 1000 + . gene_id "STRG.37"; transcript_id "STRG.37.1"; cov "3.754167"; FPKM "8724.777357"; TPM "19214.890007"; PGA_scaffold12__71_contigs__length_50438331 StringTie exon 37910949 37910966 1000 + . gene_id "STRG.37"; transcript_id "STRG.37.1"; exon_number "1"; cov "2.000000"; PGA_scaffold12__71_contigs__length_50438331 StringTie exon 37911816 37912037 1000 + . gene_id "STRG.37"; transcript_id "STRG.37.1"; exon_number "2"; cov "3.896396"; PGA_scaffold13__52_contigs__length_44396874 StringTie transcript 2304274 2307850 1000 + . gene_id "STRG.38"; transcript_id "STRG.38.1"; cov "4.981061"; FPKM "11576.109488"; TPM "25494.480994"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 2304274 2304313 1000 + . gene_id "STRG.38"; transcript_id "STRG.38.1"; exon_number "1"; cov "4.000000"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 2306245 2306414 1000 + . gene_id "STRG.38"; transcript_id "STRG.38.1"; exon_number "2"; cov "5.205883"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 2307797 2307850 1000 + . gene_id "STRG.38"; transcript_id "STRG.38.1"; exon_number "3"; cov "5.000000"; PGA_scaffold13__52_contigs__length_44396874 StringTie transcript 35198834 35199089 1000 . . gene_id "STRG.39"; transcript_id "STRG.39.1"; cov "3.511719"; FPKM "8161.322183"; TPM "17973.972473"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 35198834 35199089 1000 . . gene_id "STRG.39"; transcript_id "STRG.39.1"; exon_number "1"; cov "3.511719"; PGA_scaffold14__91_contigs__length_45393038 StringTie transcript 30442177 30443070 1000 . . gene_id "STRG.40"; transcript_id "STRG.40.1"; cov "3.090418"; FPKM "7182.208194"; TPM "15817.634630"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 30442177 30443070 1000 . . gene_id "STRG.40"; transcript_id "STRG.40.1"; exon_number "1"; cov "3.090418"; PGA_scaffold14__91_contigs__length_45393038 StringTie transcript 30443151 30443380 1000 . . gene_id "STRG.41"; transcript_id "STRG.41.1"; cov "2.917391"; FPKM "6780.089149"; TPM "14932.033437"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 30443151 30443380 1000 . . gene_id "STRG.41"; transcript_id "STRG.41.1"; exon_number "1"; cov "2.917391"; PGA_scaffold14__91_contigs__length_45393038 StringTie transcript 30461396 30461972 1000 . . gene_id "STRG.42"; transcript_id "STRG.42.1"; cov "3.603120"; FPKM "8373.740377"; TPM "18441.788679"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 30461396 30461972 1000 . . gene_id "STRG.42"; transcript_id "STRG.42.1"; exon_number "1"; cov "3.603120"; PGA_scaffold14__91_contigs__length_45393038 StringTie transcript 30462039 30466413 1000 - . gene_id "STRG.43"; transcript_id "STRG.43.1"; cov "3.797071"; FPKM "8824.487319"; TPM "19434.484830"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 30462039 30463035 1000 - . gene_id "STRG.43"; transcript_id "STRG.43.1"; exon_number "1"; cov "3.947008"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 30466239 30466413 1000 - . gene_id "STRG.43"; transcript_id "STRG.43.1"; exon_number "2"; cov "2.942857"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 7870752 7871084 1000 . . gene_id "STRG.44"; transcript_id "STRG.44.1"; cov "2.696697"; FPKM "6267.190811"; TPM "13802.459037"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 7870752 7871084 1000 . . gene_id "STRG.44"; transcript_id "STRG.44.1"; exon_number "1"; cov "2.696697"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 18295720 18295933 1000 . . gene_id "STRG.45"; transcript_id "STRG.45.1"; cov "4.210280"; FPKM "9784.795299"; TPM "21549.405526"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 18295720 18295933 1000 . . gene_id "STRG.45"; transcript_id "STRG.45.1"; exon_number "1"; cov "4.210280"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 31657947 31658823 1000 + . gene_id "STRG.46"; transcript_id "STRG.46.1"; cov "4.398010"; FPKM "10221.084482"; TPM "22510.260838"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 31657947 31658047 1000 + . gene_id "STRG.46"; transcript_id "STRG.46.1"; exon_number "1"; cov "5.237624"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 31658724 31658823 1000 + . gene_id "STRG.46"; transcript_id "STRG.46.1"; exon_number "2"; cov "3.550000"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 35085424 35085659 1000 . . gene_id "STRG.47"; transcript_id "STRG.47.1"; cov "2.559322"; FPKM "5947.927899"; TPM "13099.334878"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 35085424 35085659 1000 . . gene_id "STRG.47"; transcript_id "STRG.47.1"; exon_number "1"; cov "2.559322"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 31659648 31662913 1000 + . gene_id "STRG.48"; transcript_id "STRG.48.1"; cov "3.853868"; FPKM "8956.484958"; TPM "19725.187963"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 31659648 31659735 1000 + . gene_id "STRG.48"; transcript_id "STRG.48.1"; exon_number "1"; cov "2.772727"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 31660271 31660400 1000 + . gene_id "STRG.48"; transcript_id "STRG.48.1"; exon_number "2"; cov "3.830769"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 31662783 31662913 1000 + . gene_id "STRG.48"; transcript_id "STRG.48.1"; exon_number "3"; cov "4.603054"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 35101252 35101478 1000 . . gene_id "STRG.49"; transcript_id "STRG.49.1"; cov "2.647577"; FPKM "6153.034711"; TPM "13551.048965"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 35101252 35101478 1000 . . gene_id "STRG.49"; transcript_id "STRG.49.1"; exon_number "1"; cov "2.647577"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 35108989 35111319 1000 - . gene_id "STRG.50"; transcript_id "STRG.50.1"; cov "5.238938"; FPKM "12175.422041"; TPM "26814.368519"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 35108989 35109086 1000 - . gene_id "STRG.50"; transcript_id "STRG.50.1"; exon_number "1"; cov "4.102041"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 35111192 35111319 1000 - . gene_id "STRG.50"; transcript_id "STRG.50.1"; exon_number "2"; cov "6.109375"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 35116262 35120448 1000 - . gene_id "STRG.51"; transcript_id "STRG.51.1"; cov "2.688679"; FPKM "6248.556780"; TPM "13761.420642"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 35116262 35116373 1000 - . gene_id "STRG.51"; transcript_id "STRG.51.1"; exon_number "1"; cov "2.062500"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 35120349 35120448 1000 - . gene_id "STRG.51"; transcript_id "STRG.51.1"; exon_number "2"; cov "3.390000"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 39317253 39320810 1000 + . gene_id "STRG.52"; transcript_id "STRG.52.1"; cov "3.036281"; FPKM "7056.392462"; TPM "15540.546130"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 39317253 39317361 1000 + . gene_id "STRG.52"; transcript_id "STRG.52.1"; exon_number "1"; cov "2.000000"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 39318645 39318767 1000 + . gene_id "STRG.52"; transcript_id "STRG.52.1"; exon_number "2"; cov "2.861789"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 39320003 39320123 1000 + . gene_id "STRG.52"; transcript_id "STRG.52.1"; exon_number "3"; cov "4.198347"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 39320723 39320810 1000 + . gene_id "STRG.52"; transcript_id "STRG.52.1"; exon_number "4"; cov "2.965909"; PGA_scaffold16__33_contigs__length_31980953 StringTie transcript 20438846 20439566 1000 - . gene_id "STRG.53"; transcript_id "STRG.53.1"; cov "3.501945"; FPKM "8138.607164"; TPM "17923.946373"; PGA_scaffold16__33_contigs__length_31980953 StringTie exon 20438846 20438926 1000 - . gene_id "STRG.53"; transcript_id "STRG.53.1"; exon_number "1"; cov "3.000000"; PGA_scaffold16__33_contigs__length_31980953 StringTie exon 20439391 20439566 1000 - . gene_id "STRG.53"; transcript_id "STRG.53.1"; exon_number "2"; cov "3.732955"; PGA_scaffold16__33_contigs__length_31980953 StringTie transcript 31415058 31419385 1000 - . gene_id "STRG.54"; transcript_id "STRG.54.1"; cov "2.945000"; FPKM "6844.253150"; TPM "15073.344118"; PGA_scaffold16__33_contigs__length_31980953 StringTie exon 31415058 31415145 1000 - . gene_id "STRG.54"; transcript_id "STRG.54.1"; exon_number "1"; cov "2.761364"; PGA_scaffold16__33_contigs__length_31980953 StringTie exon 31419274 31419385 1000 - . gene_id "STRG.54"; transcript_id "STRG.54.1"; exon_number "2"; cov "3.089286"; PGA_scaffold18__69_contigs__length_27737463 StringTie transcript 18053588 18053831 1000 . . gene_id "STRG.55"; transcript_id "STRG.55.1"; cov "3.086066"; FPKM "7172.094038"; TPM "15795.359861"; PGA_scaffold18__69_contigs__length_27737463 StringTie exon 18053588 18053831 1000 . . gene_id "STRG.55"; transcript_id "STRG.55.1"; exon_number "1"; cov "3.086066";