# /gscratch/srlab/programs/stringtie-1.3.6.Linux_x86_64/stringtie Geoduck-ctenidia-RNA-1.sorted.bam -p 28 -o Geoduck-ctenidia-RNA-1.gtf -G /gscratch/srlab/sam/data/P_generosa/genomes/Pgenerosa_v070_genome_snap02.all.renamed.putative_function.domain_added.gff -C Geoduck-ctenidia-RNA-1.cov_refs.gtf # StringTie version 1.3.6 PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 6059868 6060141 1000 . . gene_id "STRG.1"; transcript_id "STRG.1.1"; cov "3.295620"; FPKM "4699.093584"; TPM "6097.435042"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 6059868 6060141 1000 . . gene_id "STRG.1"; transcript_id "STRG.1.1"; exon_number "1"; cov "3.295620"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 7667304 7667531 1000 . . gene_id "STRG.2"; transcript_id "STRG.2.1"; cov "6.618421"; FPKM "9436.943475"; TPM "12245.159373"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 7667304 7667531 1000 . . gene_id "STRG.2"; transcript_id "STRG.2.1"; exon_number "1"; cov "6.618421"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 14044025 14044268 1000 . . gene_id "STRG.3"; transcript_id "STRG.3.1"; cov "3.692623"; FPKM "5265.164384"; TPM "6831.955407"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 14044025 14044268 1000 . . gene_id "STRG.3"; transcript_id "STRG.3.1"; exon_number "1"; cov "3.692623"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 15958683 15958884 1000 . . gene_id "STRG.4"; transcript_id "STRG.4.1"; cov "7.425743"; FPKM "10588.071831"; TPM "13738.836876"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 15958683 15958884 1000 . . gene_id "STRG.4"; transcript_id "STRG.4.1"; exon_number "1"; cov "7.425743"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 19804382 19804589 1000 . . gene_id "STRG.5"; transcript_id "STRG.5.1"; cov "2.711539"; FPKM "3866.275698"; TPM "5016.789836"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 19804382 19804589 1000 . . gene_id "STRG.5"; transcript_id "STRG.5.1"; exon_number "1"; cov "2.711539"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 19804797 19805104 1000 . . gene_id "STRG.6"; transcript_id "STRG.6.1"; cov "3.724026"; FPKM "5309.940674"; TPM "6890.056084"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 19804797 19805104 1000 . . gene_id "STRG.6"; transcript_id "STRG.6.1"; exon_number "1"; cov "3.724026"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 31228761 31228985 1000 . . gene_id "STRG.7"; transcript_id "STRG.7.1"; cov "2.684444"; FPKM "3827.642015"; TPM "4966.659662"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 31228761 31228985 1000 . . gene_id "STRG.7"; transcript_id "STRG.7.1"; exon_number "1"; cov "2.684444"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 40255360 40255582 1000 . . gene_id "STRG.8"; transcript_id "STRG.8.1"; cov "2.686099"; FPKM "3830.001813"; TPM "4969.721682"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 40255360 40255582 1000 . . gene_id "STRG.8"; transcript_id "STRG.8.1"; exon_number "1"; cov "2.686099"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 40257352 40257600 1000 . . gene_id "STRG.9"; transcript_id "STRG.9.1"; cov "3.630522"; FPKM "5176.617036"; TPM "6717.058419"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 40257352 40257600 1000 . . gene_id "STRG.9"; transcript_id "STRG.9.1"; exon_number "1"; cov "3.630522"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 49656285 49656609 1000 . . gene_id "STRG.10"; transcript_id "STRG.10.1"; cov "3.633846"; FPKM "5181.356595"; TPM "6723.208361"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 49656285 49656609 1000 . . gene_id "STRG.10"; transcript_id "STRG.10.1"; exon_number "1"; cov "3.633846"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 74472478 74472683 1000 . . gene_id "STRG.11"; transcript_id "STRG.11.1"; cov "2.922330"; FPKM "4166.834208"; TPM "5406.787599"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 74472478 74472683 1000 . . gene_id "STRG.11"; transcript_id "STRG.11.1"; exon_number "1"; cov "2.922330"; PGA_scaffold1__77_contigs__length_89643857 StringTie transcript 71914264 71914814 1000 - . gene_id "STRG.12"; transcript_id "STRG.12.1"; cov "3.451613"; FPKM "4921.517803"; TPM "6386.047560"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 71914264 71914282 1000 - . gene_id "STRG.12"; transcript_id "STRG.12.1"; exon_number "1"; cov "2.894737"; PGA_scaffold1__77_contigs__length_89643857 StringTie exon 71914617 71914814 1000 - . gene_id "STRG.12"; transcript_id "STRG.12.1"; exon_number "2"; cov "3.505050"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 22120516 22120715 1000 . . gene_id "STRG.13"; transcript_id "STRG.13.1"; cov "2.855000"; FPKM "4070.831037"; TPM "5282.216107"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 22120516 22120715 1000 . . gene_id "STRG.13"; transcript_id "STRG.13.1"; exon_number "1"; cov "2.855000"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 5464097 5475361 1000 - . gene_id "STRG.14"; transcript_id "STRG.14.1"; cov "3.665406"; FPKM "5226.356745"; TPM "6781.599514"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 5464097 5464138 1000 - . gene_id "STRG.14"; transcript_id "STRG.14.1"; exon_number "1"; cov "2.380953"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 5465837 5465906 1000 - . gene_id "STRG.14"; transcript_id "STRG.14.1"; exon_number "2"; cov "2.560000"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 5472709 5472832 1000 - . gene_id "STRG.14"; transcript_id "STRG.14.1"; exon_number "3"; cov "4.632258"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 5475302 5475361 1000 - . gene_id "STRG.14"; transcript_id "STRG.14.1"; exon_number "4"; cov "3.856000"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 27081948 27084934 1000 - . gene_id "STRG.15"; transcript_id "STRG.15.1"; cov "3.271739"; FPKM "4665.042615"; TPM "6053.251294"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 27081948 27082193 1000 - . gene_id "STRG.15"; transcript_id "STRG.15.1"; exon_number "1"; cov "3.304878"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 27084905 27084934 1000 - . gene_id "STRG.15"; transcript_id "STRG.15.1"; exon_number "2"; cov "3.000000"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 34076343 34078040 1000 - . gene_id "STRG.16"; transcript_id "STRG.16.1"; cov "5.254290"; FPKM "7491.883296"; TPM "9721.294315"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 34076343 34077599 1000 - . gene_id "STRG.16"; transcript_id "STRG.16.1"; exon_number "1"; cov "5.070008"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 34077841 34078040 1000 - . gene_id "STRG.16"; transcript_id "STRG.16.1"; exon_number "2"; cov "6.412500"; PGA_scaffold2__36_contigs__length_69596280 StringTie transcript 46592319 46592658 1000 . . gene_id "STRG.17"; transcript_id "STRG.17.1"; cov "2.647059"; FPKM "3774.336229"; TPM "4897.491309"; PGA_scaffold2__36_contigs__length_69596280 StringTie exon 46592319 46592658 1000 . . gene_id "STRG.17"; transcript_id "STRG.17.1"; exon_number "1"; cov "2.647059"; PGA_scaffold3__111_contigs__length_57743597 StringTie transcript 13616337 13616644 1000 . . gene_id "STRG.18"; transcript_id "STRG.18.1"; cov "9.402597"; FPKM "13406.789385"; TPM "17396.339517"; PGA_scaffold3__111_contigs__length_57743597 StringTie exon 13616337 13616644 1000 . . gene_id "STRG.18"; transcript_id "STRG.18.1"; exon_number "1"; cov "9.402597"; PGA_scaffold3__111_contigs__length_57743597 StringTie transcript 19528553 19528776 1000 . . gene_id "STRG.19"; transcript_id "STRG.19.1"; cov "9.437500"; FPKM "13456.556186"; TPM "17460.915765"; PGA_scaffold3__111_contigs__length_57743597 StringTie exon 19528553 19528776 1000 . . gene_id "STRG.19"; transcript_id "STRG.19.1"; exon_number "1"; cov "9.437500"; PGA_scaffold3__111_contigs__length_57743597 StringTie transcript 34811000 34811322 1000 . . gene_id "STRG.20"; transcript_id "STRG.20.1"; cov "4.643963"; FPKM "6621.642282"; TPM "8592.089723"; PGA_scaffold3__111_contigs__length_57743597 StringTie exon 34811000 34811322 1000 . . gene_id "STRG.20"; transcript_id "STRG.20.1"; exon_number "1"; cov "4.643963"; PGA_scaffold3__111_contigs__length_57743597 StringTie transcript 47557616 47557870 1000 - . gene_id "STRG.21"; transcript_id "STRG.21.1"; cov "5.223529"; FPKM "7448.022408"; TPM "9664.381443"; PGA_scaffold3__111_contigs__length_57743597 StringTie exon 47557616 47557870 1000 - . gene_id "STRG.21"; transcript_id "STRG.21.1"; exon_number "1"; cov "5.223529"; PGA_scaffold3__111_contigs__length_57743597 StringTie transcript 50977763 50978045 1000 . . gene_id "STRG.22"; transcript_id "STRG.22.1"; cov "3.706714"; FPKM "5285.256181"; TPM "6858.026058"; PGA_scaffold3__111_contigs__length_57743597 StringTie exon 50977763 50978045 1000 . . gene_id "STRG.22"; transcript_id "STRG.22.1"; exon_number "1"; cov "3.706714"; PGA_scaffold3__111_contigs__length_57743597 StringTie transcript 51938116 51938323 1000 + . gene_id "STRG.23"; transcript_id "STRG.23.1"; cov "5.788462"; FPKM "8253.537921"; TPM "10709.599724"; PGA_scaffold3__111_contigs__length_57743597 StringTie exon 51938116 51938323 1000 + . gene_id "STRG.23"; transcript_id "STRG.23.1"; exon_number "1"; cov "5.788462"; PGA_scaffold3__111_contigs__length_57743597 StringTie transcript 57738754 57738953 1000 . . gene_id "STRG.24"; transcript_id "STRG.24.1"; cov "3.005000"; FPKM "4284.710076"; TPM "5559.740596"; PGA_scaffold3__111_contigs__length_57743597 StringTie exon 57738754 57738953 1000 . . gene_id "STRG.24"; transcript_id "STRG.24.1"; exon_number "1"; cov "3.005000"; PGA_scaffold4__129_contigs__length_65288255 StringTie transcript 42385332 42385560 1000 . . gene_id "STRG.25"; transcript_id "STRG.25.1"; cov "10.515284"; FPKM "14993.325558"; TPM "19454.992124"; PGA_scaffold4__129_contigs__length_65288255 StringTie exon 42385332 42385560 1000 . . gene_id "STRG.25"; transcript_id "STRG.25.1"; exon_number "1"; cov "10.515284"; PGA_scaffold4__129_contigs__length_65288255 StringTie transcript 54309820 54310144 1000 . . gene_id "STRG.26"; transcript_id "STRG.26.1"; cov "3.636923"; FPKM "5185.743967"; TPM "6728.901314"; PGA_scaffold4__129_contigs__length_65288255 StringTie exon 54309820 54310144 1000 . . gene_id "STRG.26"; transcript_id "STRG.26.1"; exon_number "1"; cov "3.636923"; PGA_scaffold4__129_contigs__length_65288255 StringTie transcript 52902696 52905507 1000 + . gene_id "STRG.27"; transcript_id "STRG.27.1"; cov "2.642680"; FPKM "3768.092387"; TPM "4889.389444"; PGA_scaffold4__129_contigs__length_65288255 StringTie exon 52902696 52902925 1000 + . gene_id "STRG.27"; transcript_id "STRG.27.1"; exon_number "1"; cov "2.665217"; PGA_scaffold4__129_contigs__length_65288255 StringTie exon 52904873 52904955 1000 + . gene_id "STRG.27"; transcript_id "STRG.27.1"; exon_number "2"; cov "3.289157"; PGA_scaffold4__129_contigs__length_65288255 StringTie exon 52905418 52905507 1000 + . gene_id "STRG.27"; transcript_id "STRG.27.1"; exon_number "3"; cov "1.988889"; PGA_scaffold4__129_contigs__length_65288255 StringTie transcript 62038783 62039464 1000 + . gene_id "STRG.28"; transcript_id "STRG.28.1"; cov "3.554545"; FPKM "5068.284451"; TPM "6576.488565"; PGA_scaffold4__129_contigs__length_65288255 StringTie exon 62038783 62038961 1000 + . gene_id "STRG.28"; transcript_id "STRG.28.1"; exon_number "1"; cov "3.877095"; PGA_scaffold4__129_contigs__length_65288255 StringTie exon 62039424 62039464 1000 + . gene_id "STRG.28"; transcript_id "STRG.28.1"; exon_number "2"; cov "2.146342"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 11631228 11631568 1000 . . gene_id "STRG.29"; transcript_id "STRG.29.1"; cov "4.366569"; FPKM "6226.117201"; TPM "8078.865535"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 11631228 11631568 1000 . . gene_id "STRG.29"; transcript_id "STRG.29.1"; exon_number "1"; cov "4.366569"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 33430066 33430273 1000 . . gene_id "STRG.30"; transcript_id "STRG.30.1"; cov "5.788462"; FPKM "8253.537921"; TPM "10709.599724"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 33430066 33430273 1000 . . gene_id "STRG.30"; transcript_id "STRG.30.1"; exon_number "1"; cov "5.788462"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 46065009 46065225 1000 . . gene_id "STRG.31"; transcript_id "STRG.31.1"; cov "5.529954"; FPKM "7884.941638"; TPM "10231.317720"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 46065009 46065225 1000 . . gene_id "STRG.31"; transcript_id "STRG.31.1"; exon_number "1"; cov "5.529954"; PGA_scaffold5__109_contigs__length_67248332 StringTie transcript 50307210 50307444 1000 . . gene_id "STRG.32"; transcript_id "STRG.32.1"; cov "16.642553"; FPKM "23729.954916"; TPM "30791.440111"; PGA_scaffold5__109_contigs__length_67248332 StringTie exon 50307210 50307444 1000 . . gene_id "STRG.32"; transcript_id "STRG.32.1"; exon_number "1"; cov "16.642553"; PGA_scaffold6__104_contigs__length_61759565 StringTie transcript 6125366 6125579 1000 . . gene_id "STRG.33"; transcript_id "STRG.33.1"; cov "9.813084"; FPKM "13992.086485"; TPM "18155.807483"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 6125366 6125579 1000 . . gene_id "STRG.33"; transcript_id "STRG.33.1"; exon_number "1"; cov "9.813084"; PGA_scaffold6__104_contigs__length_61759565 StringTie transcript 9186310 9186603 1000 . . gene_id "STRG.34"; transcript_id "STRG.34.1"; cov "5.132653"; FPKM "7318.445931"; TPM "9496.246006"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 9186310 9186603 1000 . . gene_id "STRG.34"; transcript_id "STRG.34.1"; exon_number "1"; cov "5.132653"; PGA_scaffold6__104_contigs__length_61759565 StringTie transcript 35514945 35520441 1000 - . gene_id "STRG.35"; transcript_id "STRG.35.1"; reference_id "PGEN_00001380-RA"; ref_gene_id "PGEN_00001380"; cov "0.853107"; FPKM "1216.411367"; TPM "1578.387228"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 35514945 35515307 1000 - . gene_id "STRG.35"; transcript_id "STRG.35.1"; exon_number "1"; reference_id "PGEN_00001380-RA"; ref_gene_id "PGEN_00001380"; cov "1.542700"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 35520097 35520441 1000 - . gene_id "STRG.35"; transcript_id "STRG.35.1"; exon_number "2"; reference_id "PGEN_00001380-RA"; ref_gene_id "PGEN_00001380"; cov "0.127536"; PGA_scaffold6__104_contigs__length_61759565 StringTie transcript 56395755 56395982 1000 . . gene_id "STRG.36"; transcript_id "STRG.36.1"; cov "2.640351"; FPKM "3764.771558"; TPM "4885.080413"; PGA_scaffold6__104_contigs__length_61759565 StringTie exon 56395755 56395982 1000 . . gene_id "STRG.36"; transcript_id "STRG.36.1"; exon_number "1"; cov "2.640351"; PGA_scaffold7__69_contigs__length_43120122 StringTie transcript 14269479 14269707 1000 . . gene_id "STRG.37"; transcript_id "STRG.37.1"; cov "2.620087"; FPKM "3735.877926"; TPM "4847.588705"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 14269479 14269707 1000 . . gene_id "STRG.37"; transcript_id "STRG.37.1"; exon_number "1"; cov "2.620087"; PGA_scaffold7__69_contigs__length_43120122 StringTie transcript 29592840 29593048 1000 . . gene_id "STRG.38"; transcript_id "STRG.38.1"; cov "2.861244"; FPKM "4079.734108"; TPM "5293.768526"; PGA_scaffold7__69_contigs__length_43120122 StringTie exon 29592840 29593048 1000 . . gene_id "STRG.38"; transcript_id "STRG.38.1"; exon_number "1"; cov "2.861244"; PGA_scaffold8__63_contigs__length_61151155 StringTie transcript 30818422 30818659 1000 . . gene_id "STRG.39"; transcript_id "STRG.39.1"; cov "10.117647"; FPKM "14426.350763"; TPM "18719.298756"; PGA_scaffold8__63_contigs__length_61151155 StringTie exon 30818422 30818659 1000 . . gene_id "STRG.39"; transcript_id "STRG.39.1"; exon_number "1"; cov "10.117647"; PGA_scaffold8__63_contigs__length_61151155 StringTie transcript 42716393 42718749 1000 + . gene_id "STRG.40"; transcript_id "STRG.40.1"; cov "2.594828"; FPKM "3699.862122"; TPM "4800.855431"; PGA_scaffold8__63_contigs__length_61151155 StringTie exon 42716393 42716426 1000 + . gene_id "STRG.40"; transcript_id "STRG.40.1"; exon_number "1"; cov "2.000000"; PGA_scaffold8__63_contigs__length_61151155 StringTie exon 42717061 42717209 1000 + . gene_id "STRG.40"; transcript_id "STRG.40.1"; exon_number "2"; cov "2.926174"; PGA_scaffold8__63_contigs__length_61151155 StringTie exon 42718701 42718749 1000 + . gene_id "STRG.40"; transcript_id "STRG.40.1"; exon_number "3"; cov "2.000000"; PGA_scaffold8__63_contigs__length_61151155 StringTie transcript 56469830 56475717 1000 - . gene_id "STRG.41"; transcript_id "STRG.41.1"; cov "5.989510"; FPKM "8540.204274"; TPM "11081.571347"; PGA_scaffold8__63_contigs__length_61151155 StringTie exon 56469830 56469929 1000 - . gene_id "STRG.41"; transcript_id "STRG.41.1"; exon_number "1"; cov "0.937500"; PGA_scaffold8__63_contigs__length_61151155 StringTie exon 56472529 56472582 1000 - . gene_id "STRG.41"; transcript_id "STRG.41.1"; exon_number "2"; cov "1.597222"; PGA_scaffold8__63_contigs__length_61151155 StringTie exon 56474495 56474689 1000 - . gene_id "STRG.41"; transcript_id "STRG.41.1"; exon_number "3"; cov "8.725962"; PGA_scaffold8__63_contigs__length_61151155 StringTie exon 56475644 56475717 1000 - . gene_id "STRG.41"; transcript_id "STRG.41.1"; exon_number "4"; cov "8.810811"; PGA_scaffold9__45_contigs__length_38581958 StringTie transcript 12035040 12040741 1000 - . gene_id "STRG.42"; transcript_id "STRG.42.1"; cov "6.307366"; FPKM "8993.422513"; TPM "11669.656840"; PGA_scaffold9__45_contigs__length_38581958 StringTie exon 12035040 12035114 1000 - . gene_id "STRG.42"; transcript_id "STRG.42.1"; exon_number "1"; cov "0.773333"; PGA_scaffold9__45_contigs__length_38581958 StringTie exon 12035447 12035530 1000 - . gene_id "STRG.42"; transcript_id "STRG.42.1"; exon_number "2"; cov "0.952381"; PGA_scaffold9__45_contigs__length_38581958 StringTie exon 12037535 12037691 1000 - . gene_id "STRG.42"; transcript_id "STRG.42.1"; exon_number "3"; cov "3.687898"; PGA_scaffold9__45_contigs__length_38581958 StringTie exon 12040610 12040741 1000 - . gene_id "STRG.42"; transcript_id "STRG.42.1"; exon_number "4"; cov "15.974999"; PGA_scaffold9__45_contigs__length_38581958 StringTie transcript 32938282 32938519 1000 . . gene_id "STRG.43"; transcript_id "STRG.43.1"; cov "11.420168"; FPKM "16283.563692"; TPM "21129.175255"; PGA_scaffold9__45_contigs__length_38581958 StringTie exon 32938282 32938519 1000 . . gene_id "STRG.43"; transcript_id "STRG.43.1"; exon_number "1"; cov "11.420168"; PGA_scaffold10__49_contigs__length_53961475 StringTie transcript 25492186 25494976 1000 + . gene_id "STRG.44"; transcript_id "STRG.44.1"; cov "3.019091"; FPKM "4304.801872"; TPM "5585.811246"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 25492186 25492324 1000 + . gene_id "STRG.44"; transcript_id "STRG.44.1"; exon_number "1"; cov "4.557554"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 25493927 25494052 1000 + . gene_id "STRG.44"; transcript_id "STRG.44.1"; exon_number "2"; cov "5.246032"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 25494692 25494976 1000 + . gene_id "STRG.44"; transcript_id "STRG.44.1"; exon_number "3"; cov "1.284211"; PGA_scaffold10__49_contigs__length_53961475 StringTie transcript 33372971 33373338 1000 . . gene_id "STRG.45"; transcript_id "STRG.45.1"; cov "7.796196"; FPKM "11116.286041"; TPM "14424.235406"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 33372971 33373338 1000 . . gene_id "STRG.45"; transcript_id "STRG.45.1"; exon_number "1"; cov "7.796196"; PGA_scaffold10__49_contigs__length_53961475 StringTie transcript 41599587 41599881 1000 . . gene_id "STRG.46"; transcript_id "STRG.46.1"; cov "3.054237"; FPKM "4354.915157"; TPM "5650.837084"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 41599587 41599881 1000 . . gene_id "STRG.46"; transcript_id "STRG.46.1"; exon_number "1"; cov "3.054237"; PGA_scaffold10__49_contigs__length_53961475 StringTie transcript 41601511 41606474 1000 - . gene_id "STRG.47"; transcript_id "STRG.47.1"; cov "3.103093"; FPKM "4424.576986"; TPM "5741.228661"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 41601511 41601701 1000 - . gene_id "STRG.47"; transcript_id "STRG.47.1"; exon_number "1"; cov "3.565445"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 41606375 41606474 1000 - . gene_id "STRG.47"; transcript_id "STRG.47.1"; exon_number "2"; cov "2.220000"; PGA_scaffold10__49_contigs__length_53961475 StringTie transcript 41640808 41641021 1000 . . gene_id "STRG.48"; transcript_id "STRG.48.1"; cov "2.813084"; FPKM "4011.064678"; TPM "5204.664664"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 41640808 41641021 1000 . . gene_id "STRG.48"; transcript_id "STRG.48.1"; exon_number "1"; cov "2.813084"; PGA_scaffold10__49_contigs__length_53961475 StringTie transcript 51569902 51570575 1000 . . gene_id "STRG.49"; transcript_id "STRG.49.1"; cov "2.683234"; FPKM "3825.916724"; TPM "4964.420964"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 51569902 51570575 1000 . . gene_id "STRG.49"; transcript_id "STRG.49.1"; exon_number "1"; cov "2.683234"; PGA_scaffold10__49_contigs__length_53961475 StringTie transcript 52432721 52433394 1000 . . gene_id "STRG.50"; transcript_id "STRG.50.1"; cov "3.396884"; FPKM "4843.481897"; TPM "6284.789975"; PGA_scaffold10__49_contigs__length_53961475 StringTie exon 52432721 52433394 1000 . . gene_id "STRG.50"; transcript_id "STRG.50.1"; exon_number "1"; cov "3.396884"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 287454 288779 1000 + . gene_id "STRG.51"; transcript_id "STRG.51.1"; cov "7.224880"; FPKM "10301.669262"; TPM "13367.207533"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 287454 287499 1000 + . gene_id "STRG.51"; transcript_id "STRG.51.1"; exon_number "1"; cov "5.000000"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 288617 288779 1000 + . gene_id "STRG.51"; transcript_id "STRG.51.1"; exon_number "2"; cov "7.852761"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 315469 315697 1000 . . gene_id "STRG.52"; transcript_id "STRG.52.1"; cov "3.266376"; FPKM "4657.395726"; TPM "6043.328868"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 315469 315697 1000 . . gene_id "STRG.52"; transcript_id "STRG.52.1"; exon_number "1"; cov "3.266376"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 20419673 20419912 1000 . . gene_id "STRG.53"; transcript_id "STRG.53.1"; cov "6.904167"; FPKM "9844.377341"; TPM "12773.836123"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 20419673 20419912 1000 . . gene_id "STRG.53"; transcript_id "STRG.53.1"; exon_number "1"; cov "6.904167"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 21234083 21235629 1000 + . gene_id "STRG.54"; transcript_id "STRG.54.1"; cov "3.354120"; FPKM "4782.506409"; TPM "6205.669593"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 21234083 21234301 1000 + . gene_id "STRG.54"; transcript_id "STRG.54.1"; exon_number "1"; cov "0.940639"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 21235400 21235629 1000 + . gene_id "STRG.54"; transcript_id "STRG.54.1"; exon_number "2"; cov "5.652174"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 21812852 21813180 1000 . . gene_id "STRG.55"; transcript_id "STRG.55.1"; cov "4.574468"; FPKM "6522.552123"; TPM "8463.512627"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 21812852 21813180 1000 . . gene_id "STRG.55"; transcript_id "STRG.55.1"; exon_number "1"; cov "4.574468"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 27659872 27661203 1000 - . gene_id "STRG.56"; transcript_id "STRG.56.1"; cov "3.069069"; FPKM "4376.063516"; TPM "5678.278706"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 27659872 27660123 1000 - . gene_id "STRG.56"; transcript_id "STRG.56.1"; exon_number "1"; cov "3.527778"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 27661123 27661203 1000 - . gene_id "STRG.56"; transcript_id "STRG.56.1"; exon_number "2"; cov "1.641975"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 34266934 34267183 1000 . . gene_id "STRG.57"; transcript_id "STRG.57.1"; cov "10.764000"; FPKM "15347.959818"; TPM "19915.157329"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 34266934 34267183 1000 . . gene_id "STRG.57"; transcript_id "STRG.57.1"; exon_number "1"; cov "10.764000"; PGA_scaffold11__79_contigs__length_51449921 StringTie transcript 47552804 47553149 1000 . . gene_id "STRG.58"; transcript_id "STRG.58.1"; cov "2.595376"; FPKM "3700.643493"; TPM "4801.869321"; PGA_scaffold11__79_contigs__length_51449921 StringTie exon 47552804 47553149 1000 . . gene_id "STRG.58"; transcript_id "STRG.58.1"; exon_number "1"; cov "2.595376"; PGA_scaffold12__71_contigs__length_50438331 StringTie transcript 1094411 1094647 1000 . . gene_id "STRG.59"; transcript_id "STRG.59.1"; cov "2.531646"; FPKM "3609.773419"; TPM "4683.958416"; PGA_scaffold12__71_contigs__length_50438331 StringTie exon 1094411 1094647 1000 . . gene_id "STRG.59"; transcript_id "STRG.59.1"; exon_number "1"; cov "2.531646"; PGA_scaffold12__71_contigs__length_50438331 StringTie transcript 28885251 28885508 1000 . . gene_id "STRG.60"; transcript_id "STRG.60.1"; cov "8.158915"; FPKM "11633.472648"; TPM "15095.324773"; PGA_scaffold12__71_contigs__length_50438331 StringTie exon 28885251 28885508 1000 . . gene_id "STRG.60"; transcript_id "STRG.60.1"; exon_number "1"; cov "8.158915"; PGA_scaffold13__52_contigs__length_44396874 StringTie transcript 16352277 16352483 1000 . . gene_id "STRG.61"; transcript_id "STRG.61.1"; cov "2.913043"; FPKM "4153.592244"; TPM "5389.605133"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 16352277 16352483 1000 . . gene_id "STRG.61"; transcript_id "STRG.61.1"; exon_number "1"; cov "2.913043"; PGA_scaffold13__52_contigs__length_44396874 StringTie transcript 37096094 37096304 1000 . . gene_id "STRG.62"; transcript_id "STRG.62.1"; cov "2.848341"; FPKM "4061.336233"; TPM "5269.895870"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 37096094 37096304 1000 . . gene_id "STRG.62"; transcript_id "STRG.62.1"; exon_number "1"; cov "2.848341"; PGA_scaffold13__52_contigs__length_44396874 StringTie transcript 40767037 40768272 1000 - . gene_id "STRG.63"; transcript_id "STRG.63.1"; cov "3.052786"; FPKM "4352.846234"; TPM "5648.152497"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 40767037 40767155 1000 - . gene_id "STRG.63"; transcript_id "STRG.63.1"; exon_number "1"; cov "2.025210"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 40767832 40767995 1000 - . gene_id "STRG.63"; transcript_id "STRG.63.1"; exon_number "2"; cov "4.524390"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 40768215 40768272 1000 - . gene_id "STRG.63"; transcript_id "STRG.63.1"; exon_number "3"; cov "1.000000"; PGA_scaffold13__52_contigs__length_44396874 StringTie transcript 40864840 40865052 1000 . . gene_id "STRG.64"; transcript_id "STRG.64.1"; cov "6.334898"; FPKM "9032.679297"; TPM "11720.595535"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 40864840 40865052 1000 . . gene_id "STRG.64"; transcript_id "STRG.64.1"; exon_number "1"; cov "6.334898"; PGA_scaffold13__52_contigs__length_44396874 StringTie transcript 40865118 40865380 1000 . . gene_id "STRG.65"; transcript_id "STRG.65.1"; cov "3.441065"; FPKM "4906.477829"; TPM "6366.532038"; PGA_scaffold13__52_contigs__length_44396874 StringTie exon 40865118 40865380 1000 . . gene_id "STRG.65"; transcript_id "STRG.65.1"; exon_number "1"; cov "3.441065"; PGA_scaffold14__91_contigs__length_45393038 StringTie transcript 3844122 3844369 1000 . . gene_id "STRG.66"; transcript_id "STRG.66.1"; cov "12.169354"; FPKM "17351.798235"; TPM "22515.291667"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 3844122 3844369 1000 . . gene_id "STRG.66"; transcript_id "STRG.66.1"; exon_number "1"; cov "12.169354"; PGA_scaffold14__91_contigs__length_45393038 StringTie transcript 26517997 26519304 1000 - . gene_id "STRG.67"; transcript_id "STRG.67.1"; cov "2.870192"; FPKM "4092.492706"; TPM "5310.323787"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 26517997 26518146 1000 - . gene_id "STRG.67"; transcript_id "STRG.67.1"; exon_number "1"; cov "3.040000"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 26519247 26519304 1000 - . gene_id "STRG.67"; transcript_id "STRG.67.1"; exon_number "2"; cov "2.431035"; PGA_scaffold14__91_contigs__length_45393038 StringTie transcript 26578802 26585493 1000 - . gene_id "STRG.68"; transcript_id "STRG.68.1"; cov "3.565958"; FPKM "5084.557794"; TPM "6597.604478"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 26578802 26578829 1000 - . gene_id "STRG.68"; transcript_id "STRG.68.1"; exon_number "1"; cov "2.000000"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 26579756 26579933 1000 - . gene_id "STRG.68"; transcript_id "STRG.68.1"; exon_number "2"; cov "4.123596"; PGA_scaffold14__91_contigs__length_45393038 StringTie exon 26585465 26585493 1000 - . gene_id "STRG.68"; transcript_id "STRG.68.1"; exon_number "3"; cov "1.655172"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 7868207 7868432 1000 . . gene_id "STRG.69"; transcript_id "STRG.69.1"; cov "2.672566"; FPKM "3810.705647"; TPM "4944.683423"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 7868207 7868432 1000 . . gene_id "STRG.69"; transcript_id "STRG.69.1"; exon_number "1"; cov "2.672566"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 18295515 18295740 1000 . . gene_id "STRG.70"; transcript_id "STRG.70.1"; cov "5.336283"; FPKM "7608.793856"; TPM "9872.994751"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 18295515 18295740 1000 . . gene_id "STRG.70"; transcript_id "STRG.70.1"; exon_number "1"; cov "5.336283"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 25212141 25213979 1000 + . gene_id "STRG.71"; transcript_id "STRG.71.1"; cov "4.995146"; FPKM "7122.380165"; TPM "9241.835607"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 25212141 25212190 1000 + . gene_id "STRG.71"; transcript_id "STRG.71.1"; exon_number "1"; cov "5.000000"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 25213516 25213576 1000 + . gene_id "STRG.71"; transcript_id "STRG.71.1"; exon_number "2"; cov "6.918033"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 25213885 25213979 1000 + . gene_id "STRG.71"; transcript_id "STRG.71.1"; exon_number "3"; cov "3.757895"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 31659598 31662870 1000 + . gene_id "STRG.72"; transcript_id "STRG.72.1"; cov "5.070225"; FPKM "7229.432327"; TPM "9380.744014"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 31659598 31659735 1000 + . gene_id "STRG.72"; transcript_id "STRG.72.1"; exon_number "1"; cov "4.108696"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 31660271 31660400 1000 + . gene_id "STRG.72"; transcript_id "STRG.72.1"; exon_number "2"; cov "6.884615"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 31662783 31662870 1000 + . gene_id "STRG.72"; transcript_id "STRG.72.1"; exon_number "3"; cov "3.897727"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 44789357 44789566 1000 . . gene_id "STRG.73"; transcript_id "STRG.73.1"; cov "4.314286"; FPKM "6151.568949"; TPM "7982.133450"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 44789357 44789566 1000 . . gene_id "STRG.73"; transcript_id "STRG.73.1"; exon_number "1"; cov "4.314286"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 45230226 45233428 1000 - . gene_id "STRG.74"; transcript_id "STRG.74.1"; cov "3.519123"; FPKM "5017.777629"; TPM "6510.952082"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 45230226 45230855 1000 - . gene_id "STRG.74"; transcript_id "STRG.74.1"; exon_number "1"; cov "4.093651"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 45233170 45233428 1000 - . gene_id "STRG.74"; transcript_id "STRG.74.1"; exon_number "2"; cov "2.121622"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 45235163 45237898 1000 - . gene_id "STRG.75"; transcript_id "STRG.75.1"; cov "2.994943"; FPKM "4270.370199"; TPM "5541.133504"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 45235163 45235614 1000 - . gene_id "STRG.75"; transcript_id "STRG.75.1"; exon_number "1"; cov "2.507743"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 45237191 45237359 1000 - . gene_id "STRG.75"; transcript_id "STRG.75.1"; exon_number "2"; cov "3.263314"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 45237729 45237898 1000 - . gene_id "STRG.75"; transcript_id "STRG.75.1"; exon_number "3"; cov "4.023530"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 46549291 46551403 1000 + . gene_id "STRG.76"; transcript_id "STRG.76.1"; cov "2.825397"; FPKM "4028.621296"; TPM "5227.445724"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 46549291 46549405 1000 + . gene_id "STRG.76"; transcript_id "STRG.76.1"; exon_number "1"; cov "3.004348"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 46550952 46551403 1000 + . gene_id "STRG.76"; transcript_id "STRG.76.1"; exon_number "2"; cov "2.779867"; PGA_scaffold15__101_contigs__length_47938513 StringTie transcript 46553138 46556332 1000 + . gene_id "STRG.77"; transcript_id "STRG.77.1"; cov "3.524747"; FPKM "5025.796667"; TPM "6521.357400"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 46553138 46553396 1000 + . gene_id "STRG.77"; transcript_id "STRG.77.1"; exon_number "1"; cov "2.121622"; PGA_scaffold15__101_contigs__length_47938513 StringTie exon 46555703 46556332 1000 + . gene_id "STRG.77"; transcript_id "STRG.77.1"; exon_number "2"; cov "4.101587"; PGA_scaffold16__33_contigs__length_31980953 StringTie transcript 11935512 11935767 1000 . . gene_id "STRG.78"; transcript_id "STRG.78.1"; cov "4.089844"; FPKM "5831.546021"; TPM "7566.879107"; PGA_scaffold16__33_contigs__length_31980953 StringTie exon 11935512 11935767 1000 . . gene_id "STRG.78"; transcript_id "STRG.78.1"; exon_number "1"; cov "4.089844"; PGA_scaffold16__33_contigs__length_31980953 StringTie transcript 13106636 13106867 1000 . . gene_id "STRG.79"; transcript_id "STRG.79.1"; cov "6.469828"; FPKM "9225.070622"; TPM "11970.238063"; PGA_scaffold16__33_contigs__length_31980953 StringTie exon 13106636 13106867 1000 . . gene_id "STRG.79"; transcript_id "STRG.79.1"; exon_number "1"; cov "6.469828"; PGA_scaffold17__51_contigs__length_34923512 StringTie transcript 3927299 3928095 1000 . . gene_id "STRG.80"; transcript_id "STRG.80.1"; cov "2.890841"; FPKM "4121.935294"; TPM "5348.527808"; PGA_scaffold17__51_contigs__length_34923512 StringTie exon 3927299 3928095 1000 . . gene_id "STRG.80"; transcript_id "STRG.80.1"; exon_number "1"; cov "2.890841"; PGA_scaffold17__51_contigs__length_34923512 StringTie transcript 3928771 3929022 1000 . . gene_id "STRG.81"; transcript_id "STRG.81.1"; cov "8.388889"; FPKM "11961.383435"; TPM "15520.814219"; PGA_scaffold17__51_contigs__length_34923512 StringTie exon 3928771 3929022 1000 . . gene_id "STRG.81"; transcript_id "STRG.81.1"; exon_number "1"; cov "8.388889"; PGA_scaffold17__51_contigs__length_34923512 StringTie transcript 3918666 3923165 1000 + . gene_id "STRG.82"; transcript_id "STRG.82.1"; cov "2.750958"; FPKM "3922.481684"; TPM "5089.721421"; PGA_scaffold17__51_contigs__length_34923512 StringTie exon 3918666 3918725 1000 + . gene_id "STRG.82"; transcript_id "STRG.82.1"; exon_number "1"; cov "2.000000"; PGA_scaffold17__51_contigs__length_34923512 StringTie exon 3922965 3923165 1000 + . gene_id "STRG.82"; transcript_id "STRG.82.1"; exon_number "2"; cov "2.975124"; PGA_scaffold17__51_contigs__length_34923512 StringTie transcript 4191436 4191677 1000 . . gene_id "STRG.83"; transcript_id "STRG.83.1"; cov "8.698347"; FPKM "12402.627298"; TPM "16093.362041"; PGA_scaffold17__51_contigs__length_34923512 StringTie exon 4191436 4191677 1000 . . gene_id "STRG.83"; transcript_id "STRG.83.1"; exon_number "1"; cov "8.698347"; PGA_scaffold17__51_contigs__length_34923512 StringTie transcript 5020930 5023717 1000 + . gene_id "STRG.84"; transcript_id "STRG.84.1"; cov "4.915014"; FPKM "7008.123131"; TPM "9093.578325"; PGA_scaffold17__51_contigs__length_34923512 StringTie exon 5020930 5021124 1000 + . gene_id "STRG.84"; transcript_id "STRG.84.1"; exon_number "1"; cov "2.292308"; PGA_scaffold17__51_contigs__length_34923512 StringTie exon 5023560 5023717 1000 + . gene_id "STRG.84"; transcript_id "STRG.84.1"; exon_number "2"; cov "8.151898"; PGA_scaffold17__51_contigs__length_34923512 StringTie transcript 29044656 29044875 1000 . . gene_id "STRG.85"; transcript_id "STRG.85.1"; cov "2.554545"; FPKM "3642.424193"; TPM "4726.325305"; PGA_scaffold17__51_contigs__length_34923512 StringTie exon 29044656 29044875 1000 . . gene_id "STRG.85"; transcript_id "STRG.85.1"; exon_number "1"; cov "2.554545"; PGA_scaffold670__1_contigs__length_11292 StringTie transcript 6688 6911 1000 . . gene_id "STRG.86"; transcript_id "STRG.86.1"; cov "2.687500"; FPKM "3831.999444"; TPM "4972.313761"; PGA_scaffold670__1_contigs__length_11292 StringTie exon 6688 6911 1000 . . gene_id "STRG.86"; transcript_id "STRG.86.1"; exon_number "1"; cov "2.687500"; PGA_scaffold11584__1_contigs__length_1163 StringTie transcript 96 832 1000 - . gene_id "STRG.87"; transcript_id "STRG.87.1"; reference_id "PGEN_00051349-RA"; ref_gene_id "PGEN_00051349"; cov "0.409769"; FPKM "584.273332"; TPM "758.139549"; PGA_scaffold11584__1_contigs__length_1163 StringTie exon 96 832 1000 - . gene_id "STRG.87"; transcript_id "STRG.87.1"; exon_number "1"; reference_id "PGEN_00051349-RA"; ref_gene_id "PGEN_00051349"; cov "0.409769"; PGA_scaffold16859__1_contigs__length_7283 StringTie transcript 4042 6551 1000 + . gene_id "STRG.88"; transcript_id "STRG.88.1"; reference_id "PGEN_00026637-RA"; ref_gene_id "PGEN_00026637"; cov "0.530466"; FPKM "756.370388"; TPM "981.448704"; PGA_scaffold16859__1_contigs__length_7283 StringTie exon 4042 4181 1000 + . gene_id "STRG.88"; transcript_id "STRG.88.1"; exon_number "1"; reference_id "PGEN_00026637-RA"; ref_gene_id "PGEN_00026637"; cov "0.521429"; PGA_scaffold16859__1_contigs__length_7283 StringTie exon 6413 6551 1000 + . gene_id "STRG.88"; transcript_id "STRG.88.1"; exon_number "2"; reference_id "PGEN_00026637-RA"; ref_gene_id "PGEN_00026637"; cov "0.539568"; PGA_scaffold21869__1_contigs__length_4069 StringTie transcript 1716 1922 1000 + . gene_id "STRG.89"; transcript_id "STRG.89.1"; reference_id "PGEN_00035608-RA"; ref_gene_id "PGEN_00035608"; cov "0.565217"; FPKM "805.920458"; TPM "1045.743727"; PGA_scaffold21869__1_contigs__length_4069 StringTie exon 1716 1922 1000 + . gene_id "STRG.89"; transcript_id "STRG.89.1"; exon_number "1"; reference_id "PGEN_00035608-RA"; ref_gene_id "PGEN_00035608"; cov "0.565217"; PGA_scaffold32345__1_contigs__length_8865 StringTie transcript 3138 5187 1000 + . gene_id "STRG.90"; transcript_id "STRG.90.1"; cov "4.198083"; FPKM "5985.879710"; TPM "7767.138928"; PGA_scaffold32345__1_contigs__length_8865 StringTie exon 3138 3257 1000 + . gene_id "STRG.90"; transcript_id "STRG.90.1"; exon_number "1"; cov "4.833333"; PGA_scaffold32345__1_contigs__length_8865 StringTie exon 3893 4056 1000 + . gene_id "STRG.90"; transcript_id "STRG.90.1"; exon_number "2"; cov "4.121951"; PGA_scaffold32345__1_contigs__length_8865 StringTie exon 5159 5187 1000 + . gene_id "STRG.90"; transcript_id "STRG.90.1"; exon_number "3"; cov "2.000000"; PGA_scaffold36994__1_contigs__length_8888 StringTie transcript 1562 1845 1000 - . gene_id "STRG.91"; transcript_id "STRG.91.1"; cov "4.232394"; FPKM "6034.802401"; TPM "7830.619880"; PGA_scaffold36994__1_contigs__length_8888 StringTie exon 1562 1845 1000 - . gene_id "STRG.91"; transcript_id "STRG.91.1"; exon_number "1"; cov "4.232394"; PGA_scaffold42404__1_contigs__length_3200 StringTie transcript 1696 1976 1000 . . gene_id "STRG.92"; transcript_id "STRG.92.1"; cov "2.686833"; FPKM "3831.048395"; TPM "4971.079702"; PGA_scaffold42404__1_contigs__length_3200 StringTie exon 1696 1976 1000 . . gene_id "STRG.92"; transcript_id "STRG.92.1"; exon_number "1"; cov "2.686833"; PGA_scaffold46076__1_contigs__length_17750 StringTie transcript 1814 2042 1000 . . gene_id "STRG.93"; transcript_id "STRG.93.1"; cov "2.550218"; FPKM "3636.254496"; TPM "4718.319648"; PGA_scaffold46076__1_contigs__length_17750 StringTie exon 1814 2042 1000 . . gene_id "STRG.93"; transcript_id "STRG.93.1"; exon_number "1"; cov "2.550218"; PGA_scaffold47927__1_contigs__length_1814 StringTie transcript 1272 1517 1000 . . gene_id "STRG.94"; transcript_id "STRG.94.1"; cov "9.817073"; FPKM "13997.774242"; TPM "18163.187784"; PGA_scaffold47927__1_contigs__length_1814 StringTie exon 1272 1517 1000 . . gene_id "STRG.94"; transcript_id "STRG.94.1"; exon_number "1"; cov "9.817073"; PGA_scaffold46721__1_contigs__length_10019 StringTie transcript 3206 4445 1000 + . gene_id "STRG.95"; transcript_id "STRG.95.1"; cov "7.693023"; FPKM "10969.175760"; TPM "14233.348512"; PGA_scaffold46721__1_contigs__length_10019 StringTie exon 3206 3281 1000 + . gene_id "STRG.95"; transcript_id "STRG.95.1"; exon_number "1"; cov "6.776316"; PGA_scaffold46721__1_contigs__length_10019 StringTie exon 4307 4445 1000 + . gene_id "STRG.95"; transcript_id "STRG.95.1"; exon_number "2"; cov "8.194244"; PGA_scaffold51392__1_contigs__length_1221 StringTie transcript 11 461 1000 . . gene_id "STRG.96"; transcript_id "STRG.96.1"; cov "6.441242"; FPKM "9184.310981"; TPM "11917.349296"; PGA_scaffold51392__1_contigs__length_1221 StringTie exon 11 461 1000 . . gene_id "STRG.96"; transcript_id "STRG.96.1"; exon_number "1"; cov "6.441242"; PGA_scaffold52281__1_contigs__length_28475 StringTie transcript 18100 19404 1000 - . gene_id "STRG.97"; transcript_id "STRG.97.1"; reference_id "PGEN_00011955-RA"; ref_gene_id "PGEN_00011955"; cov "0.114176"; FPKM "162.799021"; TPM "211.244240"; PGA_scaffold52281__1_contigs__length_28475 StringTie exon 18100 19404 1000 - . gene_id "STRG.97"; transcript_id "STRG.97.1"; exon_number "1"; reference_id "PGEN_00011955-RA"; ref_gene_id "PGEN_00011955"; cov "0.114176"; PGA_scaffold59822__1_contigs__length_1640 StringTie transcript 949 1620 1000 - . gene_id "STRG.98"; transcript_id "STRG.98.1"; reference_id "PGEN_00047643-RA"; ref_gene_id "PGEN_00047643"; cov "0.665179"; FPKM "948.452301"; TPM "1230.689747"; PGA_scaffold59822__1_contigs__length_1640 StringTie exon 949 1620 1000 - . gene_id "STRG.98"; transcript_id "STRG.98.1"; exon_number "1"; reference_id "PGEN_00047643-RA"; ref_gene_id "PGEN_00047643"; cov "0.665179"; PGA_scaffold59754__1_contigs__length_7369 StringTie transcript 3761 3967 1000 + . gene_id "STRG.99"; transcript_id "STRG.99.1"; cov "7.270531"; FPKM "10366.761208"; TPM "13451.669336"; PGA_scaffold59754__1_contigs__length_7369 StringTie exon 3761 3967 1000 + . gene_id "STRG.99"; transcript_id "STRG.99.1"; exon_number "1"; cov "7.270531"; PGA_scaffold66031__1_contigs__length_24994 StringTie transcript 1589 2290 1000 + . gene_id "STRG.100"; transcript_id "STRG.100.1"; reference_id "PGEN_00012761-RA"; ref_gene_id "PGEN_00012761"; cov "0.076923"; FPKM "109.681449"; TPM "142.320108"; PGA_scaffold66031__1_contigs__length_24994 StringTie exon 1589 2290 1000 + . gene_id "STRG.100"; transcript_id "STRG.100.1"; exon_number "1"; reference_id "PGEN_00012761-RA"; ref_gene_id "PGEN_00012761"; cov "0.076923"; PGA_scaffold66806__1_contigs__length_5797 StringTie transcript 753 2389 1000 + . gene_id "STRG.101"; transcript_id "STRG.101.1"; reference_id "PGEN_00030090-RA"; ref_gene_id "PGEN_00030090"; cov "0.184484"; FPKM "263.048404"; TPM "341.325519"; PGA_scaffold66806__1_contigs__length_5797 StringTie exon 753 2389 1000 + . gene_id "STRG.101"; transcript_id "STRG.101.1"; exon_number "1"; reference_id "PGEN_00030090-RA"; ref_gene_id "PGEN_00030090"; cov "0.184484"; PGA_scaffold67702__1_contigs__length_30259 StringTie transcript 25376 25594 1000 . . gene_id "STRG.102"; transcript_id "STRG.102.1"; cov "2.748858"; FPKM "3919.487377"; TPM "5085.836078"; PGA_scaffold67702__1_contigs__length_30259 StringTie exon 25376 25594 1000 . . gene_id "STRG.102"; transcript_id "STRG.102.1"; exon_number "1"; cov "2.748858"; PGA_scaffold68143__1_contigs__length_7781 StringTie transcript 1044 5452 1000 - . gene_id "STRG.103"; transcript_id "STRG.103.1"; reference_id "PGEN_00025577-RA"; ref_gene_id "PGEN_00025577"; cov "0.807339"; FPKM "1151.152595"; TPM "1493.708956"; PGA_scaffold68143__1_contigs__length_7781 StringTie exon 1044 1216 1000 - . gene_id "STRG.103"; transcript_id "STRG.103.1"; exon_number "1"; reference_id "PGEN_00025577-RA"; ref_gene_id "PGEN_00025577"; cov "1.271676"; PGA_scaffold68143__1_contigs__length_7781 StringTie exon 5299 5452 1000 - . gene_id "STRG.103"; transcript_id "STRG.103.1"; exon_number "2"; reference_id "PGEN_00025577-RA"; ref_gene_id "PGEN_00025577"; cov "0.285714"; PGA_scaffold68730__1_contigs__length_14814 StringTie transcript 6746 7086 1000 . . gene_id "STRG.104"; transcript_id "STRG.104.1"; cov "2.653959"; FPKM "3784.174665"; TPM "4910.257435"; PGA_scaffold68730__1_contigs__length_14814 StringTie exon 6746 7086 1000 . . gene_id "STRG.104"; transcript_id "STRG.104.1"; exon_number "1"; cov "2.653959"; PGA_scaffold69031__1_contigs__length_49096 StringTie transcript 19926 20445 1000 - . gene_id "STRG.105"; transcript_id "STRG.105.1"; cov "2.596154"; FPKM "3701.752813"; TPM "4803.308748"; PGA_scaffold69031__1_contigs__length_49096 StringTie exon 19926 20445 1000 - . gene_id "STRG.105"; transcript_id "STRG.105.1"; exon_number "1"; cov "2.596154"; PGA_scaffold70669__1_contigs__length_1192 StringTie transcript 8 1000 1000 - . gene_id "STRG.106"; transcript_id "STRG.106.1"; reference_id "PGEN_00051084-RA"; ref_gene_id "PGEN_00051084"; cov "0.151057"; FPKM "215.386173"; TPM "279.480112"; PGA_scaffold70669__1_contigs__length_1192 StringTie exon 8 1000 1000 - . gene_id "STRG.106"; transcript_id "STRG.106.1"; exon_number "1"; reference_id "PGEN_00051084-RA"; ref_gene_id "PGEN_00051084"; cov "0.151057"; PGA_scaffold71791__1_contigs__length_9835 StringTie transcript 2242 2460 1000 . . gene_id "STRG.107"; transcript_id "STRG.107.1"; cov "2.748858"; FPKM "3919.487377"; TPM "5085.836078"; PGA_scaffold71791__1_contigs__length_9835 StringTie exon 2242 2460 1000 . . gene_id "STRG.107"; transcript_id "STRG.107.1"; exon_number "1"; cov "2.748858"; PGA_scaffold72611__1_contigs__length_13539 StringTie transcript 1550 1804 1000 . . gene_id "STRG.108"; transcript_id "STRG.108.1"; cov "10.552941"; FPKM "15047.019178"; TPM "19524.663722"; PGA_scaffold72611__1_contigs__length_13539 StringTie exon 1550 1804 1000 . . gene_id "STRG.108"; transcript_id "STRG.108.1"; exon_number "1"; cov "10.552941"; PGA_scaffold72635__1_contigs__length_12782 StringTie transcript 8771 8985 1000 . . gene_id "STRG.109"; transcript_id "STRG.109.1"; cov "2.753488"; FPKM "3926.089110"; TPM "5094.402334"; PGA_scaffold72635__1_contigs__length_12782 StringTie exon 8771 8985 1000 . . gene_id "STRG.109"; transcript_id "STRG.109.1"; exon_number "1"; cov "2.753488"; PGA_scaffold72635__1_contigs__length_12782 StringTie transcript 11125 11405 1000 . . gene_id "STRG.110"; transcript_id "STRG.110.1"; cov "2.686833"; FPKM "3831.048395"; TPM "4971.079702"; PGA_scaffold72635__1_contigs__length_12782 StringTie exon 11125 11405 1000 . . gene_id "STRG.110"; transcript_id "STRG.110.1"; exon_number "1"; cov "2.686833"; PGA_scaffold73028__1_contigs__length_15319 StringTie transcript 13566 14000 1000 + . gene_id "STRG.111"; transcript_id "STRG.111.1"; reference_id "PGEN_00016869-RA"; ref_gene_id "PGEN_00016869"; cov "0.616092"; FPKM "878.461098"; TPM "1139.870783"; PGA_scaffold73028__1_contigs__length_15319 StringTie exon 13566 14000 1000 + . gene_id "STRG.111"; transcript_id "STRG.111.1"; exon_number "1"; reference_id "PGEN_00016869-RA"; ref_gene_id "PGEN_00016869"; cov "0.616092"; PGA_scaffold121507__1_contigs__length_13142 StringTie transcript 3368 4568 1000 + . gene_id "STRG.112"; transcript_id "STRG.112.1"; reference_id "PGEN_00018657-RA"; ref_gene_id "PGEN_00018657"; cov "0.217443"; FPKM "310.043332"; TPM "402.305050"; PGA_scaffold121507__1_contigs__length_13142 StringTie exon 3368 3499 1000 + . gene_id "STRG.112"; transcript_id "STRG.112.1"; exon_number "1"; reference_id "PGEN_00018657-RA"; ref_gene_id "PGEN_00018657"; cov "0.415119"; PGA_scaffold121507__1_contigs__length_13142 StringTie exon 4233 4568 1000 + . gene_id "STRG.112"; transcript_id "STRG.112.1"; exon_number "2"; reference_id "PGEN_00018657-RA"; ref_gene_id "PGEN_00018657"; cov "0.139785"; PGA_scaffold121505__1_contigs__length_13142 StringTie transcript 8575 9775 1000 - . gene_id "STRG.113"; transcript_id "STRG.113.1"; reference_id "PGEN_00018658-RA"; ref_gene_id "PGEN_00018658"; cov "0.215547"; FPKM "307.339901"; TPM "398.797140"; PGA_scaffold121505__1_contigs__length_13142 StringTie exon 8575 8910 1000 - . gene_id "STRG.113"; transcript_id "STRG.113.1"; exon_number "1"; reference_id "PGEN_00018658-RA"; ref_gene_id "PGEN_00018658"; cov "0.138566"; PGA_scaffold121505__1_contigs__length_13142 StringTie exon 9644 9775 1000 - . gene_id "STRG.113"; transcript_id "STRG.113.1"; exon_number "2"; reference_id "PGEN_00018658-RA"; ref_gene_id "PGEN_00018658"; cov "0.411499"; PGA_scaffold121506__1_contigs__length_11082 StringTie transcript 6514 7715 1000 - . gene_id "STRG.114"; transcript_id "STRG.114.1"; reference_id "PGEN_00020741-RA"; ref_gene_id "PGEN_00020741"; cov "0.215547"; FPKM "307.339901"; TPM "398.797140"; PGA_scaffold121506__1_contigs__length_11082 StringTie exon 6514 6849 1000 - . gene_id "STRG.114"; transcript_id "STRG.114.1"; exon_number "1"; reference_id "PGEN_00020741-RA"; ref_gene_id "PGEN_00020741"; cov "0.138566"; PGA_scaffold121506__1_contigs__length_11082 StringTie exon 7584 7715 1000 - . gene_id "STRG.114"; transcript_id "STRG.114.1"; exon_number "2"; reference_id "PGEN_00020741-RA"; ref_gene_id "PGEN_00020741"; cov "0.411499"; PGA_scaffold195571__1_contigs__length_5522 StringTie transcript 971 1352 1000 . . gene_id "STRG.115"; transcript_id "STRG.115.1"; cov "2.750000"; FPKM "3921.115710"; TPM "5087.948965"; PGA_scaffold195571__1_contigs__length_5522 StringTie exon 971 1352 1000 . . gene_id "STRG.115"; transcript_id "STRG.115.1"; exon_number "1"; cov "2.750000"; PGA_scaffold195577__1_contigs__length_5522 StringTie transcript 4171 4552 1000 . . gene_id "STRG.116"; transcript_id "STRG.116.1"; cov "2.750000"; FPKM "3921.115710"; TPM "5087.948965"; PGA_scaffold195577__1_contigs__length_5522 StringTie exon 4171 4552 1000 . . gene_id "STRG.116"; transcript_id "STRG.116.1"; exon_number "1"; cov "2.750000"; PGA_scaffold222823__1_contigs__length_1893 StringTie transcript 114 1358 1000 + . gene_id "STRG.117"; transcript_id "STRG.117.1"; reference_id "PGEN_00046001-RA"; ref_gene_id "PGEN_00046001"; cov "0.315534"; FPKM "449.907391"; TPM "583.789414"; PGA_scaffold222823__1_contigs__length_1893 StringTie exon 114 237 1000 + . gene_id "STRG.117"; transcript_id "STRG.117.1"; exon_number "1"; reference_id "PGEN_00046001-RA"; ref_gene_id "PGEN_00046001"; cov "0.500000"; PGA_scaffold222823__1_contigs__length_1893 StringTie exon 1277 1358 1000 + . gene_id "STRG.117"; transcript_id "STRG.117.1"; exon_number "2"; reference_id "PGEN_00046001-RA"; ref_gene_id "PGEN_00046001"; cov "0.036585"; PGA_scaffold222825__1_contigs__length_1893 StringTie transcript 536 1780 1000 - . gene_id "STRG.118"; transcript_id "STRG.118.1"; reference_id "PGEN_00045999-RA"; ref_gene_id "PGEN_00045999"; cov "0.315534"; FPKM "449.907391"; TPM "583.789414"; PGA_scaffold222825__1_contigs__length_1893 StringTie exon 536 617 1000 - . gene_id "STRG.118"; transcript_id "STRG.118.1"; exon_number "1"; reference_id "PGEN_00045999-RA"; ref_gene_id "PGEN_00045999"; cov "0.036585"; PGA_scaffold222825__1_contigs__length_1893 StringTie exon 1657 1780 1000 - . gene_id "STRG.118"; transcript_id "STRG.118.1"; exon_number "2"; reference_id "PGEN_00045999-RA"; ref_gene_id "PGEN_00045999"; cov "0.500000"; PGA_scaffold235555__1_contigs__length_5951 StringTie transcript 2052 4028 1000 + . gene_id "STRG.119"; transcript_id "STRG.119.1"; cov "3.970297"; FPKM "5661.088705"; TPM "7345.697640"; PGA_scaffold235555__1_contigs__length_5951 StringTie exon 2052 2075 1000 + . gene_id "STRG.119"; transcript_id "STRG.119.1"; exon_number "1"; cov "4.000000"; PGA_scaffold235555__1_contigs__length_5951 StringTie exon 2557 2669 1000 + . gene_id "STRG.119"; transcript_id "STRG.119.1"; exon_number "2"; cov "4.000000"; PGA_scaffold235555__1_contigs__length_5951 StringTie exon 3401 3529 1000 + . gene_id "STRG.119"; transcript_id "STRG.119.1"; exon_number "3"; cov "3.930233"; PGA_scaffold235555__1_contigs__length_5951 StringTie exon 3992 4028 1000 + . gene_id "STRG.119"; transcript_id "STRG.119.1"; exon_number "4"; cov "4.000000"; PGA_scaffold270412__1_contigs__length_7930 StringTie transcript 474 7559 1000 + . gene_id "STRG.120"; transcript_id "STRG.120.1"; reference_id "PGEN_00025324-RA"; ref_gene_id "PGEN_00025324"; cov "1.682331"; FPKM "2398.768914"; TPM "3112.587007"; PGA_scaffold270412__1_contigs__length_7930 StringTie exon 474 660 1000 + . gene_id "STRG.120"; transcript_id "STRG.120.1"; exon_number "1"; reference_id "PGEN_00025324-RA"; ref_gene_id "PGEN_00025324"; cov "2.320856"; PGA_scaffold270412__1_contigs__length_7930 StringTie exon 7215 7559 1000 + . gene_id "STRG.120"; transcript_id "STRG.120.1"; exon_number "2"; reference_id "PGEN_00025324-RA"; ref_gene_id "PGEN_00025324"; cov "1.336232"; PGA_scaffold270411__1_contigs__length_8142 StringTie transcript 371 7798 1000 - . gene_id "STRG.121"; transcript_id "STRG.121.1"; reference_id "PGEN_00024941-RA"; ref_gene_id "PGEN_00024941"; cov "1.967438"; FPKM "2805.291654"; TPM "3640.081504"; PGA_scaffold270411__1_contigs__length_8142 StringTie exon 371 715 1000 - . gene_id "STRG.121"; transcript_id "STRG.121.1"; exon_number "1"; reference_id "PGEN_00024941-RA"; ref_gene_id "PGEN_00024941"; cov "1.786187"; PGA_scaffold270411__1_contigs__length_8142 StringTie exon 7611 7798 1000 - . gene_id "STRG.121"; transcript_id "STRG.121.1"; exon_number "2"; reference_id "PGEN_00024941-RA"; ref_gene_id "PGEN_00024941"; cov "2.300055"; PGA_scaffold287206__1_contigs__length_17936 StringTie transcript 16156 16587 1000 - . gene_id "STRG.122"; transcript_id "STRG.122.1"; reference_id "PGEN_00015350-RA"; ref_gene_id "PGEN_00015350"; cov "0.145833"; FPKM "207.937479"; TPM "269.814859"; PGA_scaffold287206__1_contigs__length_17936 StringTie exon 16156 16587 1000 - . gene_id "STRG.122"; transcript_id "STRG.122.1"; exon_number "1"; reference_id "PGEN_00015350-RA"; ref_gene_id "PGEN_00015350"; cov "0.145833"; PGA_scaffold288263__1_contigs__length_17936 StringTie transcript 1350 1781 1000 + . gene_id "STRG.123"; transcript_id "STRG.123.1"; reference_id "PGEN_00015348-RA"; ref_gene_id "PGEN_00015348"; cov "0.145833"; FPKM "207.937479"; TPM "269.814859"; PGA_scaffold288263__1_contigs__length_17936 StringTie exon 1350 1781 1000 + . gene_id "STRG.123"; transcript_id "STRG.123.1"; exon_number "1"; reference_id "PGEN_00015348-RA"; ref_gene_id "PGEN_00015348"; cov "0.145833"; PGA_scaffold313623__2_contigs__length_20066706 StringTie transcript 4685106 4685368 1000 . . gene_id "STRG.124"; transcript_id "STRG.124.1"; cov "8.011407"; FPKM "11423.146853"; TPM "14822.410891"; PGA_scaffold313623__2_contigs__length_20066706 StringTie exon 4685106 4685368 1000 . . gene_id "STRG.124"; transcript_id "STRG.124.1"; exon_number "1"; cov "8.011407"; PGA_scaffold313623__2_contigs__length_20066706 StringTie transcript 6727653 6727980 1000 . . gene_id "STRG.125"; transcript_id "STRG.125.1"; cov "3.211890"; FPKM "4579.706304"; TPM "5942.520873"; PGA_scaffold313623__2_contigs__length_20066706 StringTie exon 6727653 6727980 1000 . . gene_id "STRG.125"; transcript_id "STRG.125.1"; exon_number "1"; cov "3.211890"; PGA_scaffold313623__2_contigs__length_20066706 StringTie transcript 16789979 16790306 1000 . . gene_id "STRG.126"; transcript_id "STRG.126.1"; cov "3.211890"; FPKM "4579.706304"; TPM "5942.520873"; PGA_scaffold313623__2_contigs__length_20066706 StringTie exon 16789979 16790306 1000 . . gene_id "STRG.126"; transcript_id "STRG.126.1"; exon_number "1"; cov "3.211890"; PGA_scaffold313624__3_contigs__length_27250344 StringTie transcript 10252937 10253194 1000 . . gene_id "STRG.127"; transcript_id "STRG.127.1"; cov "5.844961"; FPKM "8334.097600"; TPM "10814.132098"; PGA_scaffold313624__3_contigs__length_27250344 StringTie exon 10252937 10253194 1000 . . gene_id "STRG.127"; transcript_id "STRG.127.1"; exon_number "1"; cov "5.844961"; PGA_scaffold313625__2_contigs__length_12042408 StringTie transcript 11740806 11741014 1000 . . gene_id "STRG.128"; transcript_id "STRG.128.1"; cov "2.851675"; FPKM "4066.090052"; TPM "5276.064314"; PGA_scaffold313625__2_contigs__length_12042408 StringTie exon 11740806 11741014 1000 . . gene_id "STRG.128"; transcript_id "STRG.128.1"; exon_number "1"; cov "2.851675"; PGA_scaffold313626__2_contigs__length_8966709 StringTie transcript 7688332 7688547 1000 . . gene_id "STRG.129"; transcript_id "STRG.129.1"; cov "9.083333"; FPKM "12951.563536"; TPM "16805.648994"; PGA_scaffold313626__2_contigs__length_8966709 StringTie exon 7688332 7688547 1000 . . gene_id "STRG.129"; transcript_id "STRG.129.1"; exon_number "1"; cov "9.083333"; PGA_scaffold313646__4_contigs__length_6274882 StringTie transcript 3662894 3663111 1000 . . gene_id "STRG.130"; transcript_id "STRG.130.1"; cov "2.738532"; FPKM "3904.763944"; TPM "5066.731292"; PGA_scaffold313646__4_contigs__length_6274882 StringTie exon 3662894 3663111 1000 . . gene_id "STRG.130"; transcript_id "STRG.130.1"; exon_number "1"; cov "2.738532";