Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
examining piece 2692344..2740051 (47708 bp)
viterbi algorithm progress:
[%]: .Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_A is not significant enough, removed from profile.
examining piece 2228629..2266601 (37973 bp)
.Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
Warning: Block unknown_Z is not significant enough, removed from profile.
Warning: Block unknown_AA is not significant enough, removed from profile.
examining piece 15686932..15724757 (37826 bp)
.viterbi algorithm progress:
[%]: .Warning: Block unknown_K is not significant enough, removed from profile.
examining piece 24796787..24841998 (45212 bp)
viterbi algorithm progress:
[%]: examining piece 3297548..3336767 (39220 bp)
Warning: Block unknown_B is not significant enough, removed from profile.
examining piece 23294027..23335457 (41431 bp)
.viterbi algorithm progress:
[%]: Warning: Block unknown_AD is not significant enough, removed from profile.
Warning: Block unknown_AF is not significant enough, removed from profile.
Warning: Block unknown_AI is not significant enough, removed from profile.
Warning: Block unknown_AN is not significant enough, removed from profile.
Warning: Block unknown_AP is not significant enough, removed from profile.
Warning: Block unknown_AQ is not significant enough, removed from profile.
Warning: Block unknown_AR is not significant enough, removed from profile.
Warning: Block unknown_AT is not significant enough, removed from profile.
examining piece 2586013..2628612 (42600 bp)
Warning: Block unknown_BA is not significant enough, removed from profile.
Warning: Block unknown_BF is not significant enough, removed from profile.
Warning: Block unknown_BG is not significant enough, removed from profile.
examining piece 3315370..3353174 (37805 bp)
viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ....examining piece 75819..113779 (37961 bp)
examining piece 13792937..13850694 (57758 bp)
.viterbi algorithm progress:
[%]: ...examining piece 5548521..5598360 (49840 bp)
viterbi algorithm progress:
[%]: examining piece 34639496..34678187 (38692 bp)
.....viterbi algorithm progress:
[%]: Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
.examining piece 24013961..24056732 (42772 bp)
.....viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: .....examining piece 25141348..25186269 (44922 bp)
.viterbi algorithm progress:
[%]: ..10..viterbi algorithm progress:
[%]: examining piece 25702408..25744619 (42212 bp)
examining piece 16514319..16554941 (40623 bp)
..examining piece 52298474..52345725 (47252 bp)
..viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: ...examining piece 59934970..59972780 (37811 bp)
.....examining piece 38175551..38226889 (51339 bp)
.viterbi algorithm progress:
[%]: ..............examining piece 37551846..37589740 (37895 bp)
viterbi algorithm progress:
[%]: ...examining piece 32447103..32494835 (47733 bp)
.viterbi algorithm progress:
[%]: ...examining piece 53290529..53348229 (57701 bp)
viterbi algorithm progress:
[%]: ......examining piece 56082977..56129345 (46369 bp)
.....viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ..10.10..............10...examining piece 37307493..37364864 (57372 bp)
......viterbi algorithm progress:
[%]: .........1010.......examining piece 22053880..22132926 (79047 bp)
...examining piece 53299479..53345097 (45619 bp)
.10viterbi algorithm progress:
[%]: .....viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: ..............10..........10....................10....10........................examining piece 57453763..57509592 (55830 bp)
.examining piece 59102926..59140694 (37769 bp)
..........10..20....10...2010viterbi algorithm progress:
[%]: .....10....10....20....1020.....viterbi algorithm progress:
[%]: ..10...20.........1020....10............................20..................................20...10.................20.....20.....30................30......10..3020..............20............................................30...202030.................20.........40...20....20.....2020......30............40..................20............40..10.......30...30.........30......20..10.................30...50..............30.....30..40..........20.50......10...................................30..............5030...........30...40...........30.60..........10......40........40.......40......40...30.3020...............50..60......................40..................70.......40.....60...........................................4050.30........30..40...40........40.............5080......5030............................60................30......4050..70.50......50.70..20......................40..............603010................4050....40.............50...........50.....60.50..20.80........50.....60......70..................60.80.............................................60..................90........40..................40......20............60.........70........80........60.......40...50.50.....70.90.6070.6060....60.90.100.....50....
..............................................70....30........sampling algorithm progress:
[%]: ..40.......80....................9070.70.........................50.50..........80...........10.....100.......................
.50.....70................80.......20.7060..30..60....70.......90.......70............sampling algorithm progress:
[%]: ......50.....................30.........100........60.....7060
.......70...................80.90.60...10.....40...........50.....................................70.80.90sampling algorithm progress:
[%]: .80.........80.....50..20..100...........10.................
...30......................8080..4060....9060..10...80...80......80.......30.....................100...sampling algorithm progress:
[%]: ........
......100.70.........70.90...............20..
..............sampling algorithm progress:
[%]: .10040....................
.......100...1090........80.........
sampling algorithm progress:
[%]: .................30..........50...sampling algorithm progress:
[%]: ....80............................9010......6020..20....90.........................40.........90..100...7070sampling algorithm progress:
[%]: .6010.....10..
....100.90......
........90.100......30.....90..........20....
.....50sampling algorithm progress:
[%]: ........80......10.20.40......70....................60.......................2040..................sampling algorithm progress:
[%]: ...60......20......30..30............80.......10...............................Warning: Block unknown_J is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
....50........................70..30.....30...40...................90..10......90.......40.................60........10020..examining piece 2529582..2595427 (65846 bp)
........40...505080............viterbi algorithm progress:
[%]: .
..100......100..........
.100....40............
.....
.....705020..50............60..100.90.......80.........30...........80.........................sampling algorithm progress:
[%]: .6050....80
.........70100.......
.90..60.......sampling algorithm progress:
[%]: 30.........................40..........sampling algorithm progress:
[%]: ..4070............90.....80...................10........60......70..................70.......40..sampling algorithm progress:
[%]: 80.....10.....100....10......
90.....50.........................................20................9070............100...10.8010050
20...........Warning: Block unknown_K is not significant enough, removed from profile.
20............................60.....70...100...90..
..examining piece 26849439..26909862 (60424 bp)
.......30....
......3020......80....10....90.....60...viterbi algorithm progress:
[%]: ...30......90......Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
....100......examining piece 23795591..23842383 (46793 bp)
.....70.......40...examining piece 29042342..29082896 (40555 bp)
40..30viterbi algorithm progress:
[%]: .........50............viterbi algorithm progress:
[%]: .......100...90.....90..
.100....70Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
....40......sampling algorithm progress:
[%]: ...50............
...examining piece 47752750..47794288 (41539 bp)
...4080.50...........viterbi algorithm progress:
[%]: ...10..........60......................examining piece 6417481..6466627 (49147 bp)
...100.........60...
..50...
..80...50...10.................viterbi algorithm progress:
[%]: ......60..............90...................sampling algorithm progress:
[%]: .10....7020.....................60............60.....20.........10...90...sampling algorithm progress:
[%]: ..80............70................100...80......
10...........20.......7010...........30........30.........2070.........100.......
....90.10080...10.........20..........examining piece 53792845..53831540 (38696 bp)
......80.....
.........30..examining piece 51770003..51807822 (37820 bp)
....viterbi algorithm progress:
[%]: ..............40.100....
......80.40......viterbi algorithm progress:
[%]: ...........90.30........9020...............................10..2050.....................examining piece 6053477..6091449 (37973 bp)
......90viterbi algorithm progress:
[%]: 100..40...10030
..sampling algorithm progress:
[%]: 80....50
.....100....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
..............30.........60.......10.20.20......Warning: Block unknown_D is not significant enough, removed from profile.
....
..50..100.......
...........................10........examining piece 44134974..44174154 (39181 bp)
....20viterbi algorithm progress:
[%]: .90.70Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
........60.....60......examining piece 405981..443767 (37787 bp)
..30....70viterbi algorithm progress:
[%]: Warning: Block unknown_A is not significant enough, removed from profile.
......40..............................examining piece 30517293..30576569 (59277 bp)
.......viterbi algorithm progress:
[%]: .....30.3020.....80......10.10..100..Warning: Block unknown_B is not significant enough, removed from profile.
70.................sampling algorithm progress:
[%]: 40.examining piece 3093241..3137739 (44499 bp)
............
............viterbi algorithm progress:
[%]: .......70............40...20.50..........90...60...80...examining piece 33283823..33333322 (49500 bp)
30.........................................2050.10...30.10.70......viterbi algorithm progress:
[%]: ........4050..........100...sampling algorithm progress:
[%]: 30.........
...90..........10..............40...40................60.............80.....20..........60...100........
..........6050............10....30.........50.............20.................30.....100.70..........20....70.90..........Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
........
..20....Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.....609060.................70.......examining piece 21765445..21806131 (40687 bp)
.40.....viterbi algorithm progress:
[%]: .......80..30.....................................30...70......80.70...........examining piece 20186630..20243831 (57202 bp)
40..50......viterbi algorithm progress:
[%]: .....20.50................10........80.....40....90.........80..........3040...40.......10080.....sampling algorithm progress:
[%]: .......10...60.....
...................90..........60........................90...........5090...100...sampling algorithm progress:
[%]: .........90.....
.10.10...70......................................50...............sampling algorithm progress:
[%]: .100.10.100........

..20...70........60....100........20
...80.................50...sampling algorithm progress:
[%]: ..10........4020......100............................
...............10.30.70...20.....10..90....8030......20........................60....sampling algorithm progress:
[%]: 20....................30.......30..........40....40......10080...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_H is not significant enough, removed from profile.
.Warning: Block unknown_T is not significant enough, removed from profile.
.30.
.........examining piece 15918941..15957273 (38333 bp)
...50.viterbi algorithm progress:
[%]: .......10.....90.....40................50...........100.40............60.......1050...................20...50.70....90.examining piece 35850309..35888101 (37793 bp)
.10.....viterbi algorithm progress:
[%]: .
50...........60..........................................30...70...60.60...60......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
100Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
...............70..
......100....30..40.......
...20..50.40...70..........70.......10..................sampling algorithm progress:
[%]: 80...70.......examining piece 11951624..11999474 (47851 bp)
......50....80...70.............................80......viterbi algorithm progress:
[%]: ...............90....90..30.60.sampling algorithm progress:
[%]: ............80...30.........10....20...........90.........100...
80100......
..70......Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_I is not significant enough, removed from profile.
..................20........100...90
...50............8020.40.............10........40....examining piece 4306471..4351576 (45106 bp)
.viterbi algorithm progress:
[%]: ........80.....90..100.........60...
....................30........100...
.....50...50.60......2010.30Warning: Block unknown_C is not significant enough, removed from profile.
.....examining piece 24870456..24911277 (40822 bp)
.40.viterbi algorithm progress:
[%]: ..................examining piece 10957541..11015667 (58127 bp)
..40.viterbi algorithm progress:
[%]: ................60..........10.....examining piece 25064901..25108349 (43449 bp)
..viterbi algorithm progress:
[%]: ..............60..........30..50...........Warning: Block unknown_D is not significant enough, removed from profile.
...80......90....20.........20.......examining piece 52906326..52944268 (37943 bp)
..viterbi algorithm progress:
[%]: ...1010.30............40.....50.60........70examining piece 13629770..13667604 (37835 bp)
............viterbi algorithm progress:
[%]: 40...................................90..30.............70.....30.......70.70.20.....101020....................50....................80.......40......................80.............10020.....20.......................70..30...5050..
.....40....4060.................30..30.30..90....................30........90...80.......60.............................40...100sampling algorithm progress:
[%]: ........
.....70..4060...80...........40.....50..10.............70..8050.....10............50...........100...80.40..............
.......80.20....50..............80...........60.....20............sampling algorithm progress:
[%]: .....3060.......50...........................60..60..909010........examining piece 46582807..46620674 (37868 bp)
....viterbi algorithm progress:
[%]: ..40..............60........................20............90...........10.50...50.....100...........
.........30.100...........
.....40........70..20.60.sampling algorithm progress:
[%]: ......60...........40.........................90...............20.....70.30.....7050.....10.....................70......70.......30.............60...40......8070.........20........80.......50......................examining piece 27926197..27964052 (37856 bp)
.70viterbi algorithm progress:
[%]: ..70.....50...70........90.............30..................40.........80..40......10...........60.100..........
.....60.........40...90........90.......................80.20....70........60.100........
...5080........80...........................80.Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...30.........80...80...60..........90...100........50...100...
.......40examining piece 28858170..28896031 (37862 bp)
40..100...viterbi algorithm progress:
[%]: ............70100..Warning: Block unknown_B is not significant enough, removed from profile.
.90...............
....

.............100......
sampling algorithm progress:
[%]: ......50....10.....80....examining piece 4529499..4580785 (51287 bp)
.....90viterbi algorithm progress:
[%]: ........sampling algorithm progress:
[%]: ....100......
..70.......sampling algorithm progress:
[%]: ....10.....80.......90sampling algorithm progress:
[%]: .......90..............60.....sampling algorithm progress:
[%]: .............sampling algorithm progress:
[%]: ...........10.50..20............10.............10090....70....
......10...........................2010....30..90..2060............60.70..........20.................80.......10...............30.......40.............20.......20............100..30.......................40Warning: Block unknown_F is not significant enough, removed from profile.
30.....7080....50.....
..................10......30.100...............20..50..................30.
...60.....examining piece 4633673..4682872 (49200 bp)
......viterbi algorithm progress:
[%]: ..........40......................6090.40.40...80....................80.70....70sampling algorithm progress:
[%]: .............................6030...10070.sampling algorithm progress:
[%]: 5010.40...50........2050..........................90.........80...
....................80...100...10...........
.......90.10...........50.6050..60.50.....90....40....20......90........................sampling algorithm progress:
[%]: ..........................20...20.........100.....sampling algorithm progress:
[%]: ..
....70100........
........70.....10.30.....60..80.......10050...............30........30...........60.....30.20....80
...............................80................40.....70.......30..............60......90.10.20........40..........Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
......9040...Warning: Block unknown_F is not significant enough, removed from profile.
.....50.90.40.......30.......40....................100sampling algorithm progress:
[%]: ....80...
................5050..............60...70.....examining piece 41904582..41943667 (39086 bp)
....viterbi algorithm progress:
[%]: ..100.........examining piece 44239343..44277144 (37802 bp)

............90........60.......viterbi algorithm progress:
[%]: ..20..................90....6070...........50.10......100.....70..........8010....40.70.........90............50..90..80.......
...100.....7080.....
......examining piece 19930228..19973213 (42986 bp)
.....................viterbi algorithm progress:
[%]: .30........20.......90.90....90.....................examining piece 2837610..2877306 (39697 bp)
...80......20................100.....
..viterbi algorithm progress:
[%]: 10060......
.80.....................3010090...
.9040.50....100........sampling algorithm progress:
[%]: ......................60.3090....
60....Warning: Block unknown_N is not significant enough, removed from profile.
...........100....
......40..10..Warning: Block unknown_M is not significant enough, removed from profile.
...70.........50............90.........Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.......20............examining piece 36899098..36936905 (37808 bp)
50viterbi algorithm progress:
[%]: ....examining piece 4224049..4270261 (46213 bp)
...viterbi algorithm progress:
[%]: .....sampling algorithm progress:
[%]: .......60....................examining piece 6000498..6040644 (40147 bp)
...40viterbi algorithm progress:
[%]: ...30..............100......60....
examining piece 45153235..45205545 (52311 bp)
......viterbi algorithm progress:
[%]: ..examining piece 29956203..29994760 (38558 bp)
.....10........viterbi algorithm progress:
[%]: .80....60.........10sampling algorithm progress:
[%]: ..10.10.40..10070.70.......100.....................
..........10............................50.........50....2010010...70...70.
..1020...10............20.sampling algorithm progress:
[%]: ..........................60..................10.............20...90
.....sampling algorithm progress:
[%]: ...........10..30.........80..............70..70........30....80...20......................30.30...20......100...............20........60..80..80.......................90..40...20..........30...40.............10...sampling algorithm progress:
[%]: ......40...........90.....90........
.....100..................40.................
..100.........7040...
......50100.......
....50..........50..7030........50......30...30.......100.....20...sampling algorithm progress:
[%]: ..10..
..............60............6080......Warning: Block unknown_A is not significant enough, removed from profile.
..................90...........10....10..70........Warning: Block unknown_C is not significant enough, removed from profile.
50............examining piece 19049474..19087446 (37973 bp)
60.viterbi algorithm progress:
[%]: ....20...60........................70..2040.......80..30.20...20..............10...examining piece 58875172..58912964 (37793 bp)
.......viterbi algorithm progress:
[%]: 80...40...........................40.................90........30...........20.30.......10...8070...........examining piece 60714192..60752098 (37907 bp)
........viterbi algorithm progress:
[%]: .sampling algorithm progress:
[%]: .70.............100.....
...50.................30..30.....6040....40........40.............80....20........100...90............................40...........50.............30...
....80......................50...30..........60..10..8090Warning: Block unknown_J is not significant enough, removed from profile.
.1005050..4050...
...10..60.............................50............20.............................sampling algorithm progress:
[%]: ..60.examining piece 40073402..40125759 (52358 bp)
.40....60.70.....................70............30....100....50viterbi algorithm progress:
[%]: ..........................70....60....
.10......80.....7050........40..30.....20..70...80..90........................................................90......20..60...sampling algorithm progress:
[%]: 50........examining piece 26890504..26948604 (58101 bp)
80...60..................40100..60.....................80.viterbi algorithm progress:
[%]: ...100..80......
70
............60..30..........60...........90......30......60......50.........100..........70...........1070...
80.....40......9090.........80.sampling algorithm progress:
[%]: 70........100.........
.......90....80......100......60.....90.........sampling algorithm progress:
[%]: 50......sampling algorithm progress:
[%]: ...80...7010...........10.........40............examining piece 11663221..11702242 (39022 bp)
...viterbi algorithm progress:
[%]: ............80.........80...........10.....10......20.......20...........60.............70...............100..1020..............
..2090...90...100..........20.........30..
.......................90.............70.....30
7050..............90.....20...20.30.....sampling algorithm progress:
[%]: ...40........80........sampling algorithm progress:
[%]: ......30..40.100.......80...........
..........100...........80....40.50..
..................50..10................sampling algorithm progress:
[%]: ......30..........10....................100....50.....60....
...60..100.9090..60...Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.....10..
.......................30.......40..10..............60.70...70.......2020.40.............sampling algorithm progress:
[%]: .....90100..............
....................................80..70..30....80...examining piece 1088795..1131091 (42297 bp)
.......Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.10......viterbi algorithm progress:
[%]: .......100.Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.90...................30.
......70.90.50...40...80.50.80..90...9020..........20............................examining piece 32840893..32920569 (79677 bp)
10050.....
..sampling algorithm progress:
[%]: ...........Warning: Block unknown_B is not significant enough, removed from profile.
..........examining piece 76116427..76154342 (37916 bp)
100..90....
30.......viterbi algorithm progress:
[%]: ..40...........60.40............viterbi algorithm progress:
[%]: ......................100....60..examining piece 29520331..29560874 (40544 bp)
40..
............70....801060..........40..........30..viterbi algorithm progress:
[%]: .5050.............Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
10...80..Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
...................................60...............90.......20..............examining piece 30352051..30389894 (37844 bp)
...examining piece 47967525..48014147 (46623 bp)
..70.viterbi algorithm progress:
[%]: .......60..viterbi algorithm progress:
[%]: ....70........100.....
..70....20.........100.......90...40......100..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.80............30.............
.....
....70.50.......10....9010........90.......................80...........100..examining piece 87132949..87170885 (37937 bp)
40.
viterbi algorithm progress:
[%]: .........80..Warning: Block unknown_I is not significant enough, removed from profile.
sampling algorithm progress:
[%]: ...50..80...100..........30..
...........20sampling algorithm progress:
[%]: ........20..........90........50.................examining piece 2157555..2203053 (45499 bp)
.......3010..10.90......90.100......10.viterbi algorithm progress:
[%]: ........................Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
6010...30.......90....60....20.....60...........2020...............100............
.100.30..................examining piece 28794615..28833374 (38760 bp)
..20...examining piece 25136498..25174707 (38210 bp)
...30....30.....
..viterbi algorithm progress:
[%]: ...............viterbi algorithm progress:
[%]: 100..70.......30.
...10..................100.
......40...
....40....70..30......10...........sampling algorithm progress:
[%]: .................100....sampling algorithm progress:
[%]: ....4050.80...........40.sampling algorithm progress:
[%]: ..............................50........20.......70.....1020..40...
60....examining piece 43141912..43185495 (43584 bp)
...10.viterbi algorithm progress:
[%]: ......10.....50.........................................90..Warning: Block unknown_H is not significant enough, removed from profile.
..Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.......80....20.60......30....70.......20...............................10.20.....2010...........60...................50...30..80...examining piece 42846918..42884758 (37841 bp)
..........100....50....
........30....40...70......sampling algorithm progress:
[%]: .............viterbi algorithm progress:
[%]: ............30..40..20.90.......70......................90..........30........................50...50.......100.30....80
..10.......20............40............Warning: Block unknown_A is not significant enough, removed from profile.
....80..30....60..60..................40.........................2080..60...............40....50..70.examining piece 517578..555496 (37919 bp)
90100....40.viterbi algorithm progress:
[%]: ........60......
......90...................40..................30.......80........40...30..............70.10..70....60.....40.......50......100............
90100......50...40...
..examining piece 12615979..12654882 (38904 bp)
....viterbi algorithm progress:
[%]: ...................50................100.......
sampling algorithm progress:
[%]: 20.....70.........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.40.........50..........10.........80.....10..80......50.4010.....60................................7030...80....60...examining piece 36857686..36908282 (50597 bp)
....viterbi algorithm progress:
[%]: ....20........20......50.......................90...............60.........Warning: Block unknown_J is not significant enough, removed from profile.
.........70.30...704090..90..30.........examining piece 48710799..48755678 (44880 bp)
..10.60viterbi algorithm progress:
[%]: 90..50...............................60....40.............50.......80........examining piece 31242147..31280680 (38534 bp)
......viterbi algorithm progress:
[%]: 40....100..........
100........50.........5010................80......10..............90...10
80...60...........................6050....10..60........Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...............70100.10060.......
20....50.......
..............examining piece 1520784..1561229 (40446 bp)
............20.80viterbi algorithm progress:
[%]: .60.....90............70............................sampling algorithm progress:
[%]: .90...........100...307070..........70......70.......
........100....
....60...30..10................examining piece 43950085..44014957 (64873 bp)
..70.viterbi algorithm progress:
[%]: ...........90.......20.80..40...100........20.
.sampling algorithm progress:
[%]: .....80...sampling algorithm progress:
[%]: ............80..............80........70............9070.30...sampling algorithm progress:
[%]: ..70.......................50....40...................examining piece 55258539..55296676 (38138 bp)
..viterbi algorithm progress:
[%]: .....100...........9050......40........................100.....10....
......10...10........90.......50....50...sampling algorithm progress:
[%]: 100.90..80.10...
...................
.................60........10.10010....60sampling algorithm progress:
[%]: ...20.....
.....................................................20.......2010030....20.70..sampling algorithm progress:
[%]: 10....
...sampling algorithm progress:
[%]: .90..........60..........20........30.30..........20.............10...60...................80.....20..........40...70100..10...............20.....
......................80.........50..........90.40.30..30......3030.........30..........20....................60..............sampling algorithm progress:
[%]: ......100.40........100...........80.
........examining piece 17985903..18025967 (40065 bp)
..viterbi algorithm progress:
[%]: ..40..
........70..50..30.7050.................................80......1040..............20......8060..40..50....20.................sampling algorithm progress:
[%]: ..40......70..............40......10......70....90...60..20...........................Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
.......60..............50......80.100........10
50.........40.....................30...........50..90....90....70.examining piece 12827306..12886554 (59249 bp)
.......viterbi algorithm progress:
[%]: ....7020...60.....80.................20..........100...50.
.....40........................10......80............70.....60...Warning: Block unknown_A is not significant enough, removed from profile.
.......80..80....30....50...80.......................60.......30..90.......80...............examining piece 1441382..1485045 (43664 bp)
...........40.60Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
.........viterbi algorithm progress:
[%]: ..3010.....60......90.........100..10090......
.90....70.....
.........50......70examining piece 8223055..8305430 (82376 bp)
...............40.....30.......70..........100........
...........100...sampling algorithm progress:
[%]: 9080
.60............viterbi algorithm progress:
[%]: ..1060........................70...........50....10examining piece 29805213..29843074 (37862 bp)
..viterbi algorithm progress:
[%]: ..90......70............100..80...50........80Warning: Block unknown_V is not significant enough, removed from profile.
............
..10.......20...100.....
..20.......80................Warning: Block unknown_G is not significant enough, removed from profile.
.......examining piece 25728327..25796522 (68196 bp)
.20......2030.................sampling algorithm progress:
[%]: ...80.viterbi algorithm progress:
[%]: ......90...............................90..60.40..30examining piece 64284700..64324648 (39949 bp)
30.........10.............20examining piece 3712643..3750501 (37859 bp)
.....100..viterbi algorithm progress:
[%]: .......
...viterbi algorithm progress:
[%]: 100...........40...50............20...........
......40.10...........................90..........601009030.........
...30........20.40.....90.............50.70....Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
...40.....70.......................................sampling algorithm progress:
[%]: .....50..10.....30........30...80examining piece 16884590..16932980 (48391 bp)
....viterbi algorithm progress:
[%]: 40................10...10060..............60...
....................90.20........10.....100...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
..50...70.......40...100....
...........100.....
........10.80..70.4080....30...........20.....60......examining piece 55340776..55379093 (38318 bp)
....viterbi algorithm progress:
[%]: ..........sampling algorithm progress:
[%]: 90....................................9050...90..50...30....90.....100....
30.10........60.examining piece 8880830..8922185 (41356 bp)
4010.....viterbi algorithm progress:
[%]: ........80........................20..20.60....................................40....50..10...........20.90....30...........20.50.70....................examining piece 25514788..25557491 (42704 bp)
20..................90..60..examining piece 14720735..14762570 (41836 bp)
.viterbi algorithm progress:
[%]: 40.viterbi algorithm progress:
[%]: .2050.70.........................50..........60....80........
.50..........................3010....40...........30.....60...........60.......................10020...90..30.......
..........100.70........70..............4030...70..70......
...........70...sampling algorithm progress:
[%]: 80....80......................100.......40.....
...70sampling algorithm progress:
[%]: ..............10.......90.50.......80.......sampling algorithm progress:
[%]: .......40...10...sampling algorithm progress:
[%]: .............50....................20..10030.......80
.................10....................................1090...30.....6020......40.....8060.20.........................................Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
40..10.....20..............30.........70..100.......3050.
.............50..90...............examining piece 13171999..13209797 (37799 bp)
.viterbi algorithm progress:
[%]: ..........40..30.............70...........80.......60.........4080.................50.................40....................201070......Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.....6050.90...........60............50..5090......80.100........60....80............
....80examining piece 6460624..6500659 (40036 bp)
..70.viterbi algorithm progress:
[%]: ............................60.................90..............80........sampling algorithm progress:
[%]: .....100....50.........
..30...20100...70
10..90..90.....90.......sampling algorithm progress:
[%]: ................100........................80100.6070
.............10.10...........100....................90...........4020..
.20....60........30..80.......100...
..40....20.30.........examining piece 37114293..37159377 (45085 bp)
viterbi algorithm progress:
[%]: ...100.examining piece 18145151..18189800 (44650 bp)
.......viterbi algorithm progress:
[%]: ..80sampling algorithm progress:
[%]: .........40..............40
.50.....................10.........
.30..30.......50.sampling algorithm progress:
[%]: .......................10...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
..........40...sampling algorithm progress:
[%]: ...100.....60.20......60.................60.........10.........40....60..10....10.....70examining piece 58906953..58955075 (48123 bp)
.................90.............40......30.viterbi algorithm progress:
[%]: ..30....20.........80..90..20...............50......................50...20...30.......90............40.....7020.............................90...100.40.....
.......
.60..........................30....50....50.......30...50..sampling algorithm progress:
[%]: .............100................8060...30.....70.......
.................10040....60...........70........60examining piece 6292202..6329991 (37790 bp)
....viterbi algorithm progress:
[%]: ....10..................100.......sampling algorithm progress:
[%]: .....40......808070.................40.10.50.....90..........70....40...........
.......10.90.60.............20......70..20....................70........90...100..20..
........60............................100....sampling algorithm progress:
[%]: 30.....7070...50
....30....30..................100...........
...10080......40..70...40......
.....50......
....10.....................Warning: Block unknown_E is not significant enough, removed from profile.
40.50...Warning: Block unknown_E is not significant enough, removed from profile.
....Warning: Block unknown_H is not significant enough, removed from profile.
..Warning: Block unknown_M is not significant enough, removed from profile.
.......50..70.............sampling algorithm progress:
[%]: ...60..50..80......examining piece 31058755..31097021 (38267 bp)
....examining piece 14244861..14297489 (52629 bp)
viterbi algorithm progress:
[%]: .60.20viterbi algorithm progress:
[%]: .............90.......................50.60....examining piece 50853925..50912621 (58697 bp)
....................70.80..viterbi algorithm progress:
[%]: .50....................90..70.........30.........sampling algorithm progress:
[%]: ..........60...80.10.........10...70...70............60..................60..100.........10090.......
.....40....
............10..........................10..80100.....
..70......80...80..2070sampling algorithm progress:
[%]: ..10..........50.90.....................80..20..........................10..80..20.......20..............................20......examining piece 14897841..14949024 (51184 bp)
..viterbi algorithm progress:
[%]: ...6080..9080..20........30........70............30.......30.....................examining piece 57048958..57103355 (54398 bp)
.30....viterbi algorithm progress:
[%]: .................80.........90...............70..10........40.....90.40....40100.............30
..................90...............100.....10..50..........40........
..1050..90...80sampling algorithm progress:
[%]: ...........30..........100....50.....1060....
..........100..........90.10.....
..................90.....80.....70.60...100..90......
......sampling algorithm progress:
[%]: 20...........50..............100.......sampling algorithm progress:
[%]: .......8060.....20.......
.......3010..100................70...100..........
.......2090.....examining piece 17450803..17494287 (43485 bp)
.....viterbi algorithm progress:
[%]: ..40...40..Warning: Block unknown_I is not significant enough, removed from profile.
.20...sampling algorithm progress:
[%]: ......................10............100......
..6050....70.....80.....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
30...................examining piece 60654072..60699262 (45191 bp)
........................60...examining piece 8218700..8259693 (40994 bp)
...viterbi algorithm progress:
[%]: ..........40viterbi algorithm progress:
[%]: ..........10.20...100.....30..10....90..90..70
..............50..Warning: Block unknown_B is not significant enough, removed from profile.
...............80.80.
.....70...10................80................sampling algorithm progress:
[%]: .30.60............100...30....
.examining piece 40860564..40901083 (40520 bp)
....50viterbi algorithm progress:
[%]: .........20.90..............20.........70....20.......90.........................100.10..
..sampling algorithm progress:
[%]: ..10..........90...80...80.10040...........40..........................1090...30.20...............90...30...........30........20.
.............20..............Warning: Block unknown_M is not significant enough, removed from profile.
....50.....100.......
................10030.304090......................40.
.......30..............4040.examining piece 15467966..15512400 (44435 bp)
........examining piece 17483550..17522368 (38819 bp)
4050.viterbi algorithm progress:
[%]: 60.40......................sampling algorithm progress:
[%]: ...50......viterbi algorithm progress:
[%]: ..50..........................100.40..........sampling algorithm progress:
[%]: ......
.60.....60.10............50...examining piece 15185851..15224763 (38913 bp)
.70......viterbi algorithm progress:
[%]: 10.............50.....................70.......50.20...60...50...............................5010......................80......20....10..30..10...60.80......80....................................90..60........20......60.40...70....................50...Warning: Block .unknown_F is not significant enough, removed from profile.
..30...100.60......
...............205090..........70......20...70.100............100...60..10............4060..30.................examining piece 34495546..34549327 (53782 bp)
.......7040..100.80...100........viterbi algorithm progress:
[%]: .
..30......Warning: Block unknown_F is not significant enough, removed from profile.
...70....80.................40.............80...30............
..examining piece 44310486..44352137 (41652 bp)
.80..viterbi algorithm progress:
[%]: ....................
..........70......40.9090.50..80......50.90.....................70...................................100...10
....60...1020..100..70.sampling algorithm progress:
[%]: .50.60.
90..........40.examining piece 40737044..40777999 (40956 bp)
.............viterbi algorithm progress:
[%]: ...100..........
90.......60............10.........70...........sampling algorithm progress:
[%]: .......sampling algorithm progress:
[%]: ........60.............20....10......Warning: Block unknown_F is not significant enough, removed from profile.
............
.80........20....10.20.............100.....examining piece 11534455..11572259 (37805 bp)
.100.viterbi algorithm progress:
[%]: 80..
.......50.20......
..sampling algorithm progress:
[%]: examining piece 43616108..43660823 (44716 bp)
.......viterbi algorithm progress:
[%]: ..........70....20......10...70..30..........10.................................sampling algorithm progress:
[%]: ........30.........20.............90..90.............40...........30...80.......10...40.....10.....30...........20..........80..Warning: Block unknown_N is not significant enough, removed from profile.
......80................50....50..20..9030..........10..10080.........40...
.............90.................60..30......70.......60.30..sampling algorithm progress:
[%]: examining piece 40269672..40320936 (51265 bp)
...viterbi algorithm progress:
[%]: ....................4020.........50.................70.40..........10...................100............
.....70......................50.....2080.........40.60...............90....20..........................30601030..80...90......................................70....Warning: Block unknown_D is not significant enough, removed from profile.
.......100.....40...5040....10070......
..20...
.........90........30......50............examining piece 27472223..27525429 (53207 bp)
...viterbi algorithm progress:
[%]: ..80.........80..90.............50..60.............100.....30.
...60....40....sampling algorithm progress:
[%]: .Warning: Block unknown_B is not significant enough, removed from profile.
..Warning: Block unknown_K is not significant enough, removed from profile.
.90.......70...........3090.................90......80.........examining piece 25612640..25652624 (39985 bp)
..100.
80.....10............20....viterbi algorithm progress:
[%]: .......7010...........examining piece 21679407..21724856 (45450 bp)
.90.....100....viterbi algorithm progress:
[%]: ........
.....20...............10060..
..40...50....sampling algorithm progress:
[%]: 40..........................30Warning: Block unknown_J is not significant enough, removed from profile.
80.Warning: Block unknown_N is not significant enough, removed from profile.
...........10..10.........50..........................20..40..........90...examining piece 53965775..54021308 (55534 bp)
......viterbi algorithm progress:
[%]: ...........60..........30....90..50....100......50............20..examining piece 15953466..16012749 (59284 bp)
.40....viterbi algorithm progress:
[%]: 30.20....40..............50.............30....60........60...50.......10...........60100..
50............
..................60.............70..............................30.6070..60.....40......1090..........60.80................80...20............sampling algorithm progress:
[%]: .......70..........................9090...........100......30..........................10080.
50......40..1070.100..
60.examining piece 15396834..15436295 (39462 bp)
..viterbi algorithm progress:
[%]: .
...............70...4050.............30......7010..90......2060..............................70...............20..........1005010030...
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
........100..examining piece 42004053..42041989 (37937 bp)
.........sampling algorithm progress:
[%]: .....sampling algorithm progress:
[%]: .........30viterbi algorithm progress:
[%]: ....80.................40..60examining piece 36408255..36451290 (43036 bp)
.viterbi algorithm progress:
[%]: ...........40..........20.......101040..........................100..........
..50........
.........
..................1050....2060..sampling algorithm progress:
[%]: .20.....4010............sampling algorithm progress:
[%]: .......80..........100.9060..20........80.....50.......60.................................30...30..........30100.........10....30........10......70.......70.....................20......704040........40........................20...........
..100.....80..80..70......
70........5020..50..........50.......50...............................30.......90.......90.........60.......1050..70........6030.........20..Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
Warning: Block unknown_AB is not significant enough, removed from profile.
Warning: Block unknown_AG is not significant enough, removed from profile.
...
..30.40....40...........100.sampling algorithm progress:
[%]: 100......60

..........70........70sampling algorithm progress:
[%]: .examining piece 12862046..12917195 (55150 bp)
.....viterbi algorithm progress:
[%]: ..........sampling algorithm progress:
[%]: .......50.......................90..............40.80......90.......10..............80.........40.......60..10...................20..............90..Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
....................50....90.10.....80....106030...70.....60.................100.....
..20...........examining piece 26971975..27016395 (44421 bp)
...viterbi algorithm progress:
[%]: ...40.............100..30....
.........80.........60......50...50........50...............30....60..80..60..10.......60....90..70....70...............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.20........70......70......20................40.100......
.............80..Warning: Block unknown_C is not significant enough, removed from profile.
........examining piece 43701967..43741232 (39266 bp)
..........20........viterbi algorithm progress:
[%]: ......8090....100......50............60..............100
.examining piece 36384229..36424538 (40310 bp)

70.100.viterbi algorithm progress:
[%]: 80..70......Warning: Block unknown_B is not significant enough, removed from profile.
...............30............10.....
.9060................10.....sampling algorithm progress:
[%]: examining piece 7273363..7320765 (47403 bp)
........Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
.....viterbi algorithm progress:
[%]: .....30...................70.....examining piece 37223893..37269748 (45856 bp)
.......20...10070.viterbi algorithm progress:
[%]: 2030......
......80..sampling algorithm progress:
[%]: .....80........................sampling algorithm progress:
[%]: ......40...1060.................80....30..8040..........30...........70.........Warning: Block unknown_C is not significant enough, removed from profile.
..Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
10.....................10..10.......................20..40.....70.10examining piece 41867090..41904921 (37832 bp)
.90...40....viterbi algorithm progress:
[%]: ....90.40...............................50....20............................20.................100..20.10.30..
..50............50..............90.......30.....................80...................30..50...40.9040....8080..20......9060...80....40..80......60...........60.............................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.....30....40..........50......20....70..................................70.50............examining piece 7762885..7801310 (38426 bp)
.100.......50viterbi algorithm progress:
[%]: .20.60....
.....70..........70.....30.6090.........................................70..40....10.......50..60sampling algorithm progress:
[%]: ...................60.80.100........................80.......80.
.100...............20...........70...50.8090..................100....100....4090..
............
.10....90sampling algorithm progress:
[%]: ................sampling algorithm progress:
[%]: ........50..70.9080.....
.70100.....
.....90...........sampling algorithm progress:
[%]: ..........................1010...................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
9080.............90............10.20....examining piece 12335023..12373295 (38273 bp)
...viterbi algorithm progress:
[%]: 80..30.50...........100.......20..............20.....
......90.sampling algorithm progress:
[%]: ....30.....80.20....100...10.....
............................10030..........sampling algorithm progress:
[%]: .100.................
....3030.
60......40.30..............20....10..............90..40.............80............60..40.......20...............40.............50examining piece 37420492..37458856 (38365 bp)
..100viterbi algorithm progress:
[%]: ..50....70..sampling algorithm progress:
[%]: ......30..........50..10......examining piece 30200196..30238084 (37889 bp)
30....viterbi algorithm progress:
[%]: .......
.......100..........40....60.....10........1040...................5060..........10...............60..............50......20
..............20........20...........sampling algorithm progress:
[%]: ......60............40.......70..70..60...........70......30.....30.......30.60...50..................................90.70.................................40.80.40.....8090..20....40...............108050...........90................50.......sampling algorithm progress:
[%]: .......90........70.70..5050..................90..9090................................60...........60.100.................100....
..60...............60...80....2010....100100.......
70.
.......80................
..70...40..........60...30.........70...80...Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
.....30.......20.................80.............70..30..examining piece 2663170..2708090 (44921 bp)
90..viterbi algorithm progress:
[%]: .....90...80.................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
....80...................9090.100.examining piece 38080808..38118657 (37850 bp)
30....viterbi algorithm progress:
[%]: 
................................90...90........examining piece 33232942..33277128 (44187 bp)
...100.viterbi algorithm progress:
[%]: .1010......sampling algorithm progress:
[%]: ..100...........
..40........100....70....
..........4080.....
..20.100............40.sampling algorithm progress:
[%]: ....
............10.............10..............50sampling algorithm progress:
[%]: ..30..10.......80.20............50........50....................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
10...20........................40....90.....100.........20......20..sampling algorithm progress:
[%]: .2030..
.....90..........examining piece 13216179..13272486 (56308 bp)
..........60......................50...viterbi algorithm progress:
[%]: ........40.30..............100....70..examining piece 9348444..9388585 (40142 bp)
...viterbi algorithm progress:
[%]: .....6060..30.50...10......30....50.........40.......................30.8060.....70.....................
..60......50.......................20.....10100........................
.4070.....60......70.......................70..........80100....100...7080..30examining piece 8250723..8288554 (37832 bp)
...70viterbi algorithm progress:
[%]: ...........40
.................40.................50..80....90.........80...................20......40...........10....100...90....60.
.......90........Warning: Block unknown_E is not significant enough, removed from profile.
.......sampling algorithm progress:
[%]: ...80.....sampling algorithm progress:
[%]: .......90........60.90.5080..100..
...
......................20......100.............
.examining piece 12976962..13014727 (37766 bp)
.....viterbi algorithm progress:
[%]: .90...........10............60....sampling algorithm progress:
[%]: .50..100..50......70..
...................90.30...70examining piece 30457200..30494983 (37784 bp)
.10..viterbi algorithm progress:
[%]: .30.100......10...sampling algorithm progress:
[%]: 90..20........70.............Warning: Block unknown_E is not significant enough, removed from profile.
................................10...1080..70............................90......30.80.......10040.100...20...examining piece 11302824..11350414 (47591 bp)
.......viterbi algorithm progress:
[%]: ...
......................20..........100.20.....
...30...90........90.....20.40.....100.............10...40..60....
..40...10050........................examining piece 74456821..74498360 (41540 bp)
......viterbi algorithm progress:
[%]: ......100........
.3050.....50.100..10.60........
...............30....3040.sampling algorithm progress:
[%]: Warning: Block unknown_C is not significant enough, removed from profile.
....
..sampling algorithm progress:
[%]: ..10.....20..60......................60..80.
..................20.......60........60......sampling algorithm progress:
[%]: .sampling algorithm progress:
[%]: 10....4070...........20....examining piece 33402765..33440626 (37862 bp)
......Warning: Block unknown_A is not significant enough, removed from profile.
viterbi algorithm progress:
[%]: ....10..............................Warning: Block unknown_G is not significant enough, removed from profile.
...........50..40...
......20..80.............80...3030..40.....70..70......examining piece 9667057..9704831 (37775 bp)
......
/gscratch/srlab/programs/Augustus-3.3.2/bin/augustus: ERROR
	Invalid block no. in SubstateModel::blockNoOfB

viterbi algorithm progress:
[%]: .......30........10...50................examining piece 9180477..9234573 (54097 bp)
20..30....viterbi algorithm progress:
[%]: 50.......90.........................70..............................................1040.10..408010070..
.........40.....10.60.....50.......30........20.40..50...60....................50.....................90...Warning: Block unknown_Q is not significant enough, removed from profile.
.................50..........90...................5020....60.....40....80.......................................70....examining piece 54835836..54881796 (45961 bp)
......viterbi algorithm progress:
[%]: ..30..80..70....70.20....60..100........60...
..60.50...................50.....20..............................80.....................examining piece 8379340..8419661 (40322 bp)
.30.........viterbi algorithm progress:
[%]: ...80........60............40...10..90.....80....6060..90......................100....80....10.80.....30...70....100..
.60.
.70.............90...................30...7040.70.....50.............................................examining piece 34822972..34860779 (37808 bp)
.........90...........100...20.....100
....70.viterbi algorithm progress:
[%]: .80.80...........
..80...40...........10010.90..................60.......70..........40..examining piece 37548649..37586483 (37835 bp)
..viterbi algorithm progress:
[%]: ......90..examining piece 10380044..10417863 (37820 bp)
..viterbi algorithm progress:
[%]: sampling algorithm progress:
[%]: ...........................90.90.....20............Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.....50.......90.......10...20..10.......80........70..100...8050.....
...................
....................examining piece 47564555..47602392 (37838 bp)
...100....2030..
..viterbi algorithm progress:
[%]: .....10...20..10......50...100....100.70...................
30.sampling algorithm progress:
[%]: ...10080...........10.30.....
...
...........................30.......................90.10.20....60.sampling algorithm progress:
[%]: 40.10.90...20.............100..................60..............Warning: Block unknown_D is not significant enough, removed from profile.
......40.4020.50.....................30.......sampling algorithm progress:
[%]: .
..........60...........................30.9030sampling algorithm progress:
[%]: 60....80Warning: Block unknown_I is not significant enough, removed from profile.
......30....90......8090100.......10...............50.....10............
.....examining piece 83288223..83326492 (38270 bp)
40....viterbi algorithm progress:
[%]: 70..70............40......................100.....................20....
.70examining piece 16695958..16735413 (39456 bp)
....5050...20viterbi algorithm progress:
[%]: .sampling algorithm progress:
[%]: ......40...80......40........................10........20................70........60..................sampling algorithm progress:
[%]: ...30.90.............90sampling algorithm progress:
[%]: ...............................................100..10010..70.........80............100..60....

.50.....4030
..1040.10..10...5020....10...........60...30..........80.............................70....................20......50....20...80..........20..80..sampling algorithm progress:
[%]: .....9090.......................sampling algorithm progress:
[%]: ..100.......60..................30..
30.50..........................901003060...
...60.........40..Warning: Block unknown_L is not significant enough, removed from profile.
....10.....20......70.40....100....10........40.........................................30..sampling algorithm progress:
[%]: ..40....70.............20.........20...50....
....70......examining piece 44212411..44251860 (39450 bp)
.......20.........90..............................10..40.....5050....100.......viterbi algorithm progress:
[%]: ........80..60..
70...........30........50.....30.........90..30.20.80.............................50.........60...7040................90..........80...........30.40examining piece 35645855..35701389 (55535 bp)
......viterbi algorithm progress:
[%]: ...............40......sampling algorithm progress:
[%]: ......................80........60...100.70..............100..40...30..

........50.......50.......10...50..80...40......100...90.................60.....50....................80.............90............60...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_J is not significant enough, removed from profile.
.100....90.....50.
60....
...60...10..............70............................90..........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.20......7070.....50....70..................9060................100....100examining piece 36633512..36671547 (38036 bp)
...examining piece 12769302..12808367 (39066 bp)
.100viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: .
....80...10..........40.......examining piece 2552648..2590476 (37829 bp)
..20..viterbi algorithm progress:
[%]: 100..80...
.80...........60...
..........sampling algorithm progress:
[%]: .examining piece 9375118..9428006 (52889 bp)
...80...viterbi algorithm progress:
[%]: ......90.10....................10................sampling algorithm progress:
[%]: ...10.30....................90......90......100........
..60..20..60..........10...........Warning: Block unknown_B is not significant enough, removed from profile.
..Warning: Block unknown_P is not significant enough, removed from profile.
........sampling algorithm progress:
[%]: ........30......70.....20..10.....100.....100......10100
..
.30....
..
........20.90....70...60...examining piece 34805469..34846591 (41123 bp)
........20..........50..10.....................70...sampling algorithm progress:
[%]: 2040....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
viterbi algorithm progress:
[%]: ........30..40.....................70.40.....30........20.........20....................3050.....Warning: Block unknown_F is not significant enough, removed from profile.
....examining piece 25781195..25824044 (42850 bp)
.30100....Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..viterbi algorithm progress:
[%]: .....10.....
................80........20.4030...4070.....................................60....examining piece 25832399..25883560 (51162 bp)
....examining piece 11449453..11512190 (62738 bp)
50....40..viterbi algorithm progress:
[%]: ......viterbi algorithm progress:
[%]: .......20..............8040.......50..........40.50.........50......60..70..........10...50..................................50.....30............60..........sampling algorithm progress:
[%]: ............Warning: Block unknown_F is not significant enough, removed from profile.
.........60.................80.......60.......60.60...90.............50..30.......80....904070.....................10.......................examining piece 37807137..37848918 (41782 bp)
90.....70..70.30......................80........70.70..80.50.....viterbi algorithm progress:
[%]: .................10..............70.....80.............80......100............60....20....100
..90..........60...
........80.100...90...70.....sampling algorithm progress:
[%]: ........40......9080...
.................100..........
.....20..10090...
..70..10....10080...20.............100......
....90.........20........sampling algorithm progress:
[%]: 7020...........70...8090..Warning: Block unknown_M is not significant enough, removed from profile.
..........80.........................30....10........................30......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
........examining piece 7130654..7194622 (63969 bp)
90.....40....90.100.viterbi algorithm progress:
[%]: 20..........
100.....
.30.
....3050........examining piece 12599403..12699465 (100063 bp)
examining piece 18762001..18799811 (37811 bp)
...viterbi algorithm progress:
[%]: 50...........100Warning: Block unknown_B is not significant enough, removed from profile.
....30..40.
...sampling algorithm progress:
[%]: ...............viterbi algorithm progress:
[%]: ......80....sampling algorithm progress:
[%]: ...40.....60...........80......10.10..40......30.....10....................90............70.....................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.50...10examining piece 8004943..8042765 (37823 bp)
....20.....viterbi algorithm progress:
[%]: 10..........20......100..........80..50..40.......60.......80......
.....60.....30...........................examining piece 37465772..37503840 (38069 bp)
.20........90......90....10viterbi algorithm progress:
[%]: ...........30....70..60..40...............................10040...........
..........sampling algorithm progress:
[%]: 30.........100..8060.50..............20.......20
.......................40.................809060.......examining piece 26105276..26143152 (37877 bp)
4010.....10viterbi algorithm progress:
[%]: ......90100........50.................................100....70.
..
...........3070.....50100...50....20.10...40...examining piece 43238577..43276438 (37862 bp)
...............10.....80.
.........viterbi algorithm progress:
[%]: ....50................Warning: Block unknown_A is not significant enough, removed from profile.
....................3030.60..90.....60...70..Warning: Block unknown_A is not significant enough, removed from profile.
.40............50..100....80........sampling algorithm progress:
[%]: ......
....100......examining piece 1606457..1680775 (74319
 bp)
20.......40.....sampling algorithm progress:
[%]: ..........viterbi algorithm progress:
[%]: ..70.examining piece 31663289..31701195 (37907 bp)
....viterbi algorithm progress:
[%]: .....10...............10............60................70..........sampling algorithm progress:
[%]: ...50.50.30..........................20..20..80..10......90.............10..................20..............................60..4030............10..Warning: Block unknown_A is not significant enough, removed from profile.
...Warning: Block unknown_O is not significant enough, removed from profile.
...10...........30.....90..20...........80...............40......40...10......80...50.602070......100...........10......
....40......100.....20....
examining piece 46916739..46966298 (49560 bp)
50.......30...........viterbi algorithm progress:
[%]: ..............................80..........60...50.60.......50..........................30309040.........90......70...........70....9090.60........................Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
..Warning: Block unknown_O is not significant enough, removed from profile.
70..70.......60............50.........80..........40.100......
.........10..40..................20.examining piece 6875788..6936689 (60902 bp)
....examining piece 56565493..56605983 (40491 bp)
..viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: 90.....90........80100...60.....70.........
.............50............100.....
...................60...80.....30...sampling algorithm progress:
[%]: ....70..50.....90........10..........60.20...............20...10.....80...........examining piece 6243950..6282177 (38228 bp)
......80...........................viterbi algorithm progress:
[%]: ..100..20.....
...8070.................10..30.70.90...90........sampling algorithm progress:
[%]: .............30.60.......................examining piece 1676276..1721903 (45628 bp)
.....20..viterbi algorithm progress:
[%]: ........100.....80.....100.10..40.40
.
..............30......................................50.2060..........30...........90..50........30.....10.......60...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
30....70....sampling algorithm progress:
[%]: .....90..................................100examining piece 20695173..20734857 (39685 bp)
...viterbi algorithm progress:
[%]: ....70..
......40..100.....20......20...........................10.....4020..5080.70................60.......................40......
...10....60.80.90...............Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.Warning: Block unknown_U is not significant enough, removed from profile.
...20..............3080.............100.2070
...........50.........40.30...examining piece 12900281..12944918 (44638 bp)
.....viterbi algorithm progress:
[%]: .......40.....80.30...20................................90.....100..70..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
.90.............9010030....sampling algorithm progress:
[%]: 
......40...40...............100...
.examining piece 40590186..40628380 (38195 bp)
30..viterbi algorithm progress:
[%]: ...............40............10...............50.............60sampling algorithm progress:
[%]: .80.......100......
70......10..............50.sampling algorithm progress:
[%]: 40...20.............60...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
...901070.....................50..100................
90..
.........20.....10.....70.50examining piece 32643871..32687518 (43648 bp)
............20.10.70......viterbi algorithm progress:
[%]: .....50..sampling algorithm progress:
[%]: .................sampling algorithm progress:
[%]: ...60............................20...80...................10..60......50.10.10....100....40...........20.20.......
......................90..20.3020.....60.30...........................50....100....sampling algorithm progress:
[%]: ...10.............30........80..30..100.....30.30.
...............100..........30..........40...70.......10....70......
...40.......................70
..50..........Warning: Block unknown_H is not significant enough, removed from profile.
..................40.....sampling algorithm progress:
[%]: 40.......50.........20........60examining piece 208683..249365 (40683 bp)
viterbi algorithm progress:
[%]: ....................40.20.........40....40..................60.....90..70..80.80..........10.sampling algorithm progress:
[%]: .80...50........30.....................80.........80....80........70.........10..................10........................50....204050..50...90.....................5080......60...............20....................100....
...............50.....30....90..30..90...........20......30....................90.......100..50.......90.70..60100....
.
.60......60.......40......40...........................30.......................50..70...........30.....60.....sampling algorithm progress:
[%]: .Warning: Block unknown_E is not significant enough, removed from profile.
80.....50..Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
....................100....70..80...60.......100
.....80.......10......
examining piece 3058851..3100140 (41290 bp)
.70..viterbi algorithm progress:
[%]: ......40..............60.........70....examining piece 71852740..71895401 (42662 bp)
.viterbi algorithm progress:
[%]: .....90................20..sampling algorithm progress:
[%]: ..90....100..90.........sampling algorithm progress:
[%]: ........40..............
......8010........80.............70.........30........10.10...........30..10100.....100...
..60........
...80.....90...........sampling algorithm progress:
[%]: ......70......40......60......20..60...202020.80.........20.................100..........
........Warning: Block unknown_A is not significant enough, removed from profile.
.......50.........90......30.......30....50......1050...examining piece 20936812..20980261 (43450 bp)
...viterbi algorithm progress:
[%]: ........90..............30.....60................90...40........40............30..........Warning: Block unknown_A is not significant enough, removed from profile.
.10.....................50.examining piece 3105816..3160485 (54670 bp)
.....70...1009020......100
50......40.....50.....
................examining piece 41079025..41116853 (37829 bp)
...80.viterbi algorithm progress:
[%]: ......................80..........20viterbi algorithm progress:
[%]: ...60.....60.......100.40..........30..
......50........70......6090.............70.....70.....30...............................100.....
..........Warning: Block unknown_E is not significant enough, removed from profile.
......80..60.80.examining piece 15643633..15681950 (38318 bp)
.40..viterbi algorithm progress:
[%]: ...........10......4070....50....60.............................90.90.........................50...20examining piece 30723302..30767989 (44688 bp)
.100..........Warning: Block unknown_F is not significant enough, removed from profile.
..viterbi algorithm progress:
[%]: ..........9070...1001050....100
........
...
....70...................examining piece 11893983..11938116 (44134 bp)
..30.viterbi algorithm progress:
[%]: .60..........60....60............10...examining piece 87911613..87956864 (45252 bp)
...viterbi algorithm progress:
[%]: .........60.....20....................10..........................40..Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
8070...70.20..................80...........examining piece 250512..289940 (39429 bp)
....viterbi algorithm progress:
[%]: ...60...30.70.80..sampling algorithm progress:
[%]: 10...80.....20...70.........examining piece 57204241..57251955 (47715 bp)
.....viterbi algorithm progress:
[%]: ..............80.......50........100....10.................70...90................10...40
...........30......80...40..90....................20..................10......................20.............100......sampling algorithm progress:
[%]: .
100....50...30
...30...90...807090..40................20...10.............30........sampling algorithm progress:
[%]: .........40.............60.9040..90.20.........................60..10100..9090........
...80........4010030.examining piece 3025048..3070091 (45044 bp)
...viterbi algorithm progress:
[%]: ...20..........50.30.......6020.......sampling algorithm progress:
[%]: .50...............30.......40........................10........50....30..........10.............50..........
............................100..............40..70....40..20.40..60...60.
..............20..60.........90..................50....60......50..........30....70..........................50..................sampling algorithm progress:
[%]: .60......30..................40.80......7070...30................80................60..........7010...50.......50.....60...70..90......................................80...........80...100...100.80..2010060......sampling algorithm progress:
[%]: .100.....
..............
...
.
......70....8070....90..70.......70............30...............................90.....80100......
.......8040..............sampling algorithm progress:
[%]: 60...............4040...8040........80........sampling algorithm progress:
[%]: ................90......10.100100..........10
..Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
..sampling algorithm progress:
[%]: ....8090.50...........
..................100.......90
.50...50.................20..sampling algorithm progress:
[%]: .........90.......60................90............examining piece 84344068..84384702 (40635 bp)
.....10Warning: Block unknown_D is not significant enough, removed from profile.
10.Warning: Block unknown_S is not significant enough, removed from profile.
........viterbi algorithm progress:
[%]: .....30..........................70.100.20......70..........
.........60........40.....10...60...examining piece 17858973..17898009 (39037 bp)
..viterbi algorithm progress:
[%]: ..50..20.......100.90.examining piece 18687098..18726235 (39138 bp)
..80....examining piece 67715989..67762960 (46972 bp)
.......viterbi algorithm progress:
[%]: .....
..100.70.....sampling algorithm progress:
[%]: ..50...100viterbi algorithm progress:
[%]: .20.........
.....................80.......
70.10......sampling algorithm progress:
[%]: .50....90............30......10.60......sampling algorithm progress:
[%]: ...30..20................60.....70...............................100......20..
.....9020.........70..........sampling algorithm progress:
[%]: ..30...8040.....................1010.........80....100...............10.......30....80.......
.903010..30.10............................50.........80............40..............40.......90...20.............2070.sampling algorithm progress:
[%]: ....40......90................................50.........60..100......40.30...
.40....................20.......10.............examining piece 57570382..57613368 (42987 bp)
.........60...20......viterbi algorithm progress:
[%]: .......50..40.30......................90.70.10.....50..90.................90..20..........50..70..50........9050..................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
....................100...............30...........
..40...806030.8080...................10.......60examining piece 21893154..21930958 (37805 bp)
....60............................viterbi algorithm progress:
[%]: ........sampling algorithm progress:
[%]: ..60...7060..70.90........60.....40...................30.........50.90..................20.....100...70....40.10080...
.................
....50.......90.............10..................100.100....90........
.............70...60.
..70...60.sampling algorithm progress:
[%]: ....80.......70...100....
....50............20...........20..........................70.10.10.......................70..........90.30...Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
.sampling algorithm progress:
[%]: ..80...40........30...examining piece 20243435..20284521 (41087 bp)
....8020......viterbi algorithm progress:
[%]: ..10080...............60...80.....................
............examining piece 15477076..15557140 (80065 bp)
..........40viterbi algorithm progress:
[%]: 10Warning: Block unknown_L is not significant enough, removed from profile.
...8030...............90....100.10040................
.........90.............sampling algorithm progress:
[%]: .80...........40.......100...9010.20..100...sampling algorithm progress:
[%]: .....
70
........70.examining piece 46859860..46898072 (38213 bp)
...........90..50........50......viterbi algorithm progress:
[%]: .80.90.
....50............100..........10.....20.......100..30...............
.............................60...Warning: Block unknown_C is not significant enough, removed from profile.
..60100.100......1020........
....
........60.
.....80.....40............30......30sampling algorithm progress:
[%]: examining piece 16042140..16083077 (40938 bp)
....viterbi algorithm progress:
[%]: ..50.70.30.....1010.............100...................
70...............50..........Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
...........40..80.........40..examining piece 31879459..31930157 (50699 bp)
...70..........20....90..........viterbi algorithm progress:
[%]: .............8050Warning: Block unknown_I is not significant enough, removed from profile.
.....10..60...90sampling algorithm progress:
[%]: examining piece 50822879..50873731 (50853 bp)
........viterbi algorithm progress:
[%]: ...20.....Warning: Block unknown_A is not significant enough, removed from profile.
.........................10.....50.......60..................100.......
...sampling algorithm progress:
[%]: examining piece 15637971..15679848 (41878 bp)
..examining piece 43230104..43267986 (37883 bp)
..70viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: ....1009080...100.................
.....70...................20...20...3010.............................2010.......80.80.60..10...........10..100.10............
...................10..........20.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_V is not significant enough, removed from profile.
..........90.Warning: Block unknown_B is not significant enough, removed from profile.
....................9030................30....20.....60100examining piece 36212668..36250676 (38009 bp)
...viterbi algorithm progress:
[%]: .
70....10.3040....30....20..90...............examining piece 59240928..59278786 (37859 bp)
viterbi algorithm progress:
[%]: ..Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
..100....20......
.............40......40..................40...
.........20.10...examining piece 43861590..43899364 (37775 bp)
10.viterbi algorithm progress:
[%]: .80.....30...............50................................2050....40.....Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
....40Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
...sampling algorithm progress:
[%]: .....10..50.......60..........50.....20....80.............20.examining piece 9045446..9084516 (39071 bp)
.......................90...........70.........viterbi algorithm progress:
[%]: ..60........40.examining piece 26489282..26534308 (45027 bp)
...20..viterbi algorithm progress:
[%]: .30.......90.20....10................50............60.....80.60................30................70...........................20.........90...100.......90...5030...........50.30.20.
...................30.80................70....10....40........sampling algorithm progress:
[%]: ..40....100.70.........60..........30..........20.....
..30....90....30........30.............40sampling algorithm progress:
[%]: .........................60....10.....70....80..........30...........40.........10......50..50.......100......60............
.80......2040.................100sampling algorithm progress:
[%]: 20.....3020.....................................40.......90.........7050
......30.......40....70...........10...6040............50...............30.50........40.......60.............................90...........100..20............50.....
.............100...................4060...40..........60..70..60..80....50....30..30.
...............70..........80...80....sampling algorithm progress:
[%]: ..........70......100.50...........70.
60....50.4070....................Warning: Block unknown_A is not significant enough, removed from profile.
.........80.............................................50.60.........90.70...........90.60.....examining piece 18253395..18292674 (39280 bp)
.viterbi algorithm progress:
[%]: ...........50.80.80.....Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
...............sampling algorithm progress:
[%]: ......100..
...60...................70.80......5010.........90...examining piece 13205820..13246971 (41152 bp)
..70............................10.viterbi algorithm progress:
[%]: 40...70....8010...90.30........20.........80....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
...80.........60.....90..................100.................80....
...........examining piece 15706301..15744099 (37799 bp)
...30.viterbi algorithm progress:
[%]: .....20......100...40......90...
..70.40......90.....................10...100......90...............80.sampling algorithm progress:
[%]: ...40.
.........................30..........10010........sampling algorithm progress:
[%]: ....10010.......50..
..20...100.....
.....2090.100..
10........90........
.........100....50......Warning: Block unknown_F is not significant enough, removed from profile.
..
40.....................30.......60.5020........60...10802060..40..sampling algorithm progress:
[%]: ....90...sampling algorithm progress:
[%]: ..........90........examining piece 11688362..11748975 (60614 bp)
.....50viterbi algorithm progress:
[%]: ...............70..60...........3040.............100........10........
..10.......examining piece 8817936..8864364 (46429 bp)
...................viterbi algorithm progress:
[%]: ....................Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
20Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
........60.....40..20..sampling algorithm progress:
[%]: ......100....307020.70.......50.....10......
....................30................50.100..examining piece 27109971..27147796 (37826 bp)
.......30examining piece 40295192..40336811 (41620 bp)
.....viterbi algorithm progress:
[%]: .......30
.70..........viterbi algorithm progress:
[%]: ..............30.....10.......................sampling algorithm progress:
[%]: .......4010..60......80........40...60...10...............................80..........................50.......20.6010..90............50..70..20..................100....40................10......20..40..60....90..20...40...90...
............60...........80......................................70.20.30.30.................30........50..examining piece 113878..172172 (58295 bp)
..70...viterbi algorithm progress:
[%]: 100...30........
.....9080..........70......80....40.............................sampling algorithm progress:
[%]: 20..........80..................10010040......
.5090...............................100....50
..40...60.....90...10..........50....100...60.
...............10.40............sampling algorithm progress:
[%]: ....50......100.......
.........70...........30........50...3050..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
..10..............70........70....examining piece 26829426..26869996 (40571 bp)
80.20.viterbi algorithm progress:
[%]: ..............70.20..60............20...............examining piece 41958959..42001850 (42892 bp)
..examining piece 14341736..14381967 (40232 bp)
.Warning: Block unknown_G is not significant enough, removed from profile.
...viterbi algorithm progress:
[%]: ..........90...........60.................10.viterbi algorithm progress:
[%]: ...3090.............6030.....80...10060.....
.......70....50.........examining piece 47022735..47092859 (70125 bp)
..40.....viterbi algorithm progress:
[%]: ......................20............40........50...30.10.....80......40..................40.......80.....90......70..60...............................30..10..........70.............50.70................20....examining piece 2849451..2887291 (37841 bp)
....20
..70..viterbi algorithm progress:
[%]: .......90.................100......70.80...
...4010.........60.........8050.......20.......60.40.30...........90.............100........sampling algorithm progress:
[%]: ...
....50.......................80100...100..
....50........50..........70.....30...40Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
.......90...80..60.
...80................10..................................80......80.60..examining piece 62336163..62379148 (42986 bp)
..70.20...20.............viterbi algorithm progress:
[%]: .....50....examining piece 19594886..19640221 (45336 bp)
..viterbi algorithm progress:
[%]: .9040.....................90.....9030..100.............sampling algorithm progress:
[%]: 
..6090examining piece 43780703..43835206 (54504 bp)
....70.viterbi algorithm progress:
[%]: ..................100............70...................40........50............10sampling algorithm progress:
[%]: 60.10..........10.......100...........
.....50....100.90....50..80.80....
............90..10...........2010.................sampling algorithm progress:
[%]: .....
...............60...8080...........70.......20........30.....20................60.90......60.......................sampling algorithm progress:
[%]: .30...........70..40....20....10..........................examining piece 36489666..36531290 (41625 bp)
.....viterbi algorithm progress:
[%]: ............40.60....80..70.....50...100........90.......1090.........
....80.......100.10....50.............
.....100..60.....20.2030.............10............
..........60..sampling algorithm progress:
[%]: 30.......................7090..90.....20........90....100.................7010.......................30......
..80...........Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
...............100sampling algorithm progress:
[%]: ...........80....20.....100.......30...
.20..........
........90...............10.....4090.3070...40.examining piece 12680289..12730061 (49773 bp)
..sampling algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: .100................40.....70..
............100.......
......20...........sampling algorithm progress:
[%]: 10040..40...
...........10.............sampling algorithm progress:
[%]: ..............sampling algorithm progress:
[%]: .......3030..30......50.........100..30........10....50...20......
..........50...10...30.............40..60.....10.............................10.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.....30...............20.50.50.............70.........50...................60.60......60..........examining piece 40801778..40843282 (41505 bp)
.examining piece 35555677sampling algorithm progress:
[%]: ..35613526 (57850 bp)
.4080viterbi algorithm progress:
[%]: ..60..30.............8020...40...............20viterbi algorithm progress:
[%]: ............................................5020.....70....40...10..20..90......................70.100.......10..............................7030.....808060......50100....30.....
....................20............................................90.30...20.7060..
.40.80......................40......50....60................100..90..
...60..3080..40...80.....70.......................30..30.........90.........50.........90...40........90.80...40..............................50.......Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.40......................90.100.40....90
.........60...100............sampling algorithm progress:
[%]: .
........examining piece 9754476..9794775 (40300 bp)
...100.......viterbi algorithm progress:
[%]: ........100......

........50....5060.....50....examining piece 85913877..85952793 (38917 bp)
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
....viterbi algorithm progress:
[%]: .6070........100...sampling algorithm progress:
[%]: ........
..............5040..........10.examining piece 3803049..3848191 (45143 bp)
.viterbi algorithm progress:
[%]: ............70.....60..10..........70.....7080...............70.................Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
......10.Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...60.....100..20.........70.10........20examining piece 20433742..20490451 (56710 bp)
........90......
.......examining piece 23528016..23571937 (43922 bp)
...viterbi algorithm progress:
[%]: 80.........................examining piece 12306667..12344930 (38264 bp)
.viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: ...............30..60.......20........80.....100.........
.30.............7020........70........10.90...sampling algorithm progress:
[%]: .50..............10..40.....50.........90.........30...80.40....60......................10...........................10010.50.....
....10.30802010080......
...20.............50......40...............................60.........................20examining piece 51528379..51566240 (37862 bp)
...viterbi algorithm progress:
[%]: ........Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.............80.608050........30.30.....90..........40....70......10.....40....20..Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.............examining piece 2529846..2568070 (38225 bp)
...viterbi algorithm progress:
[%]: .........30...............................2070..80...10.60............80....70.......examining piece 42140479..42183078 (42600 bp)
...........30.................40..viterbi algorithm progress:
[%]: ...30...10.......40.90......100.......60......90....
.......90..40.....8070.....40.....40.....50..70.....50.............................50............sampling algorithm progress:
[%]: ...100..........90
..........50.6050..............9080....9050............20.10..........................60......70.............100........60.....20.......50..20.60...........90examining piece 25176966..25220977 (44012 bp)
.....viterbi algorithm progress:
[%]: ..............100...60..80........
.60......30......70.............70............................6010..sampling algorithm progress:
[%]: ........80....100.40.....70..100.....30......
........................10.
...80.100..........70..8050................20.......................20................70.
........6080.......................30..90.sampling algorithm progress:
[%]: Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
.Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
..
....30.90..30.................70...90......70....70...40....100............40........examining piece 9943288..9998833 (55546 bp)
...90viterbi algorithm progress:
[%]: .............100...
..80.80.50.
...90......10.40...sampling algorithm progress:
[%]: .....sampling algorithm progress:
[%]: .........60............................60......90.....100................
............................70...1050...20...100..Warning: Block unknown_C is not significant enough, removed from profile.
......
80100......sampling algorithm progress:
[%]: ...sampling algorithm progress:
[%]: ............80....70.
...80........50...10......80.examining piece 20192823..20234240 (41418 bp)
10.......100.....20..10viterbi algorithm progress:
[%]: .................
90......sampling algorithm progress:
[%]: 3010...60.....................................20................100...80....
...30.....40.................sampling algorithm progress:
[%]: 20.........10.20...30.10...........100...40.....70.70..........................40....
.............40.examining piece 7407525..7445392 (37868 bp)
....viterbi algorithm progress:
[%]: 30..............................20.....................50..901050....50.....Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...........30..40...60.........90......20.................10..60.....20.8030.......................60........50......60....examining piece 25265114..25302879 (37766 bp)
....viterbi algorithm progress:
[%]: ................70........................20............20.....40...40.........70.60examining piece 43000568..43040698 (40131 bp)
...........80.30..........90...10...................70.....90..80viterbi algorithm progress:
[%]: .....................50.90.90.....70...50.9080..............30.............30..........50...........100......
............20......100.8080...60.......90......40.70......80..............100.................................40...80.90.......100.40100..30
.
7010060..........90......
..30..................
........100....
......................sampling algorithm progress:
[%]: ..examining piece 25114139..25151967 (37829 bp)
...80..........50.4010010..50.50...
.
.sampling algorithm progress:
[%]: viterbi algorithm progress:
[%]: .90.......20....70...................sampling algorithm progress:
[%]: ..10...90.........100...90....................10................50......Warning: Block unknown_I is not significant enough, removed from profile.
.......examining piece .9272667..9310528 (37862 bp)
....
viterbi algorithm progress:
[%]: ......sampling algorithm progress:
[%]: ........2060........20...100.....80...
.....80..60............10.............10.....examining piece 42625707..42663502 (37796 bp)
....viterbi algorithm progress:
[%]: ........100.60.30.30...........60.................10..........30................100......sampling algorithm progress:
[%]: .7040...10
....40....2090..........20...60......................10.40...........70.50.............examining piece 32189445..32234720 (45276 bp)
...2050..10...........viterbi algorithm progress:
[%]: ................................
..20..30....examining piece 30134613..30172696 (38084 bp)
.60.viterbi algorithm progress:
[%]: ...100...........80...100...................
..6030..7020..
.............................30..sampling algorithm progress:
[%]: ....7010.10.......70.................10..................80..30.40....70.....30.....................40....80..........90.....90..........20......40.10.....sampling algorithm progress:
[%]: ...........40............sampling algorithm progress:
[%]: ....80........40.100..90........20...............50....90.......40.......80.............................80......100.20....
..30....90100
.......5050.........
50.......................90...examining piece 45777779..45815832 (38054 bp)
..10...........viterbi algorithm progress:
[%]: ...90...........30....10.........100......
3060..6050..........40............................60........................20Warning: Block unknown_C is not significant enough, removed from profile.
sampling algorithm progress:
[%]: .Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.60...............examining piece 14134275..14179418 (45144 bp)
.....70.........40..........40.viterbi algorithm progress:
[%]: ..20..50.....100.....905050........
..examining piece 31526684..31574008 (47325 bp)
.......viterbi algorithm progress:
[%]: .70.......70..20.....3080...90.60...100.....50........................70...20....examining piece 25917330..26001377 (84048 bp)
...................60.........sampling algorithm progress:
[%]: ......30...
.90...............40...6080........................80...................1010....viterbi algorithm progress:
[%]: .......100......10..
............80......10....100...70...50.70....70....2070.
.........40.....90...........................sampling algorithm progress:
[%]: .................90.......30...........80...............100sampling algorithm progress:
[%]: 60..............20...90..................40100...50...80.....
9080...........10...............10..90
2020...............50.......Warning: Block unknown_A is not significant enough, removed from profile.
.....60.70..................................100...10020.......20.3030..

.60100...50....
...60............90....................Warning: Block unknown_D is not significant enough, removed from profile.
.8030........70...90.10..examining piece 52255408..52294043 (38636 bp)
...viterbi algorithm progress:
[%]: ..sampling algorithm progress:
[%]: ...30..................................................40.....80..........examining piece 2279757..2326450 (46694 bp)
......40.sampling algorithm progress:
[%]: ........106070.....90...30...viterbi algorithm progress:
[%]: .20...30...40.........10....50100......90............................
............20..................30..............examining piece 31111165..31148963 (37799 bp)
.1005010060.
.....viterbi algorithm progress:
[%]: ......
..10......examining piece 46634428..46680919 (46492 bp)
.....30....sampling algorithm progress:
[%]: ..80....10....100...30..............10......50viterbi algorithm progress:
[%]: 
.............70....20...........60....10...........10..............40................Warning: Block unknown_D is not significant enough, removed from profile.
...........40.....Warning: Block unknown_K is not significant enough, removed from profile.
.....80.........40.20..20..sampling algorithm progress:
[%]: ........90.......5070.......40.20examining piece 13651074..13689764 (38691 bp)
......20.viterbi algorithm progress:
[%]: .......................100....40..........examining piece 1533422..1595123 (61702 bp)
....90..30...................20..30.
..10............60.......50........3010....viterbi algorithm progress:
[%]: ...60...80.....70......100........
..40......sampling algorithm progress:
[%]: ..........100......30.....20....
...70...............30.........20...50...................10.......90............60.....30.50..80..40.......40...........60.............40......................................100.10...30......
40..90........70.........Warning: Block unknown_E is not significant enough, removed from profile.
.........40....70.............Warning: Block unknown_C is not significant enough, removed from profile.
..100.............70.......5050.100..80...
....50........40....50...............50...examining piece 2699700..2756187 (56488 bp)
.............Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..90...examining piece 57075070..57112862 (37793 bp)
.6020.viterbi algorithm progress:
[%]: ............viterbi algorithm progress:
[%]: 20.............50................60...........100....
..50examining piece 19272579..19316248 (43670 bp)
60.50...........8070...10..20......40....10...
...............viterbi algorithm progress:
[%]: .....60...............60..........80..........30................60....60........20.60.....sampling algorithm progress:
[%]: ..70....70......90.....100........examining piece 39343226..39390446 (47221 bp)
...60....90.............viterbi algorithm progress:
[%]: .80..................30.................100....80.
.30.70.........70.......40...1010.....70..........60......80....................examining piece 218260..257741 (39482 bp)
.70.viterbi algorithm progress:
[%]: .70..................40.90.......100.....
...20........................20
..............................50....10...20..10.70..80.80..90...50..Warning: Block unknown_F is not significant enough, removed from profile.
........100.....sampling algorithm progress:
[%]: ....70.
.............80.....80....30....80......40............sampling algorithm progress:
[%]: ...............30....50...................10examining piece 25932007..25969907 (37901 bp)
.....2090..........20.60.6090......viterbi algorithm progress:
[%]: ........40..........30.................................60.20................10...................................50.....30................100..10080....30.
..
...7070......30807090..40.............70..................20.
/gscratch/srlab/programs/Augustus-3.3.2/bin/augustus: ERROR
	Invalid block no. in SubstateModel::blockNoOfB

..sampling algorithm progress:
[%]: 60......40..........40..............50..................90..........80......10................50.80...80...........70.......................20.80.....3050.......50..............90....100...60Warning: Block unknown_I is not significant enough, removed from profile.
..Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
.................
10090.....30...4080.......................90.............90..examining piece 16857620..16899342 (41723 bp)
......viterbi algorithm progress:
[%]: .............examining piece 54180911..54227936 (47026 bp)
7040.viterbi algorithm progress:
[%]: ...........40......90.......
.........90.60.40.....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
...........50...100..10.......80....60.......80.....
.....60...........sampling algorithm progress:
[%]: ...........100examining piece 26476143..26513968 (37826 bp)
...viterbi algorithm progress:
[%]: ......100.....60
........
...50.100...sampling algorithm progress:
[%]: 20..................90............100....10......
.
..70..70..........10.....10....30.........100......
..........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
..20..80..100...sampling algorithm progress:
[%]: .....60.......Warning: Block unknown_C is not significant enough, removed from profile.
.....90......sampling algorithm progress:
[%]: ........4010...........examining piece 26530696..26571533 (40838 bp)
.
........9030.viterbi algorithm progress:
[%]: ...20.10........30...........80....10..........examining piece 49779638..49827676 (48039 bp)
.....viterbi algorithm progress:
[%]: ..............100....
..70.5040.........20..............10...................................10...30....50sampling algorithm progress:
[%]: .20......examining piece 31080712..31118567 (37856 bp)
.30................viterbi algorithm progress:
[%]: .....6040.....10..1020..............80......90.......1040..6020..90.......70.................Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
..................90.....................5070.......40....20.10.....70............................3090.......examining piece 37851346..37889243 (37898 bp)
.....viterbi algorithm progress:
[%]: ..60.....30......................30.20............80..............20......80.....50....70...20........100..................40.10..100......
.....
90......50........40.....80...............30...........50......40..70..........90.100...30...
.........90sampling algorithm progress:
[%]: ........30...20....................60....50.......40....Warning: Block unknown_N is not significant enough, removed from profile.
...........100.......
.......30........10.............70...60.100...........examining piece 16509277..16562585 (53309 bp)

.50.viterbi algorithm progress:
[%]: ........50.......60.100.....Warning: Block unknown_G is not significant enough, removed from profile.
..30.60..sampling algorithm progress:
[%]: 20..80.................40...........................
....................609030....examining piece 52371632..52417114 (45483 bp)
..1030viterbi algorithm progress:
[%]: ...................40....Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_E is not significant enough, removed from profile.
...70.......60......40.......40.......100....
..........20..40.......10...10........................90examining piece 55237415..55298135 (60721 bp)
....70.....8070viterbi algorithm progress:
[%]: ......5030sampling algorithm progress:
[%]: 50...............50.....................10070.........100................5040....60...20......................90.10....examining piece 15318815..15356709 (37895 bp)
.....viterbi algorithm progress:
[%]: ................50...............2020....70.......
..........60......................20.80..80.10.30...100.10.60.....
......80.................70...60............80............50........30.70............
90....20..60......................40.....90........30......70.80...sampling algorithm progress:
[%]: .....100...40
...............sampling algorithm progress:
[%]: ..........20.9030......................90.......................70.50............100......10..50...
.........100.....
........40.................806070.10.....Warning: Block unknown_U is not significant enough, removed from profile.
.....90.........examining piece 48023520..48061378 (37859 bp)
viterbi algorithm progress:
[%]: ..4020..............20...............................30.70.Warning: Block unknown_H is not significant enough, removed from profile.
50.10100..............Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.examining piece 23531025..23569624 (38600 bp)
...viterbi algorithm progress:
[%]: ...
............60.20....60...............examining piece 27960426..28009519 (49094 bp)
.viterbi algorithm progress:
[%]: .30......8030............90.........20.60.........examining piece 68951032..68988878 (37847 bp)
......viterbi algorithm progress:
[%]: ......sampling algorithm progress:
[%]: ...................80.................1010........90......30........40.30.....1080...................................70.70......80..40..........20..10050....2010
...40...............80.....100.......50....50........50..30.........
.......40...100.40....................
.80.......302040.........20.30.......60..............60.80..............50..................sampling algorithm progress:
[%]: ....80.........sampling algorithm progress:
[%]: ....50....40........90....30..60.Warning: Block unknown_B is not significant enough, removed from profile.
50........90.70......40......................10..70.................70......70................30..................90..........20...40....5010..80..........examining piece 58812433..58857378 (44946 bp)
....60..viterbi algorithm progress:
[%]: 80....................90.50.................6080....30......90.....100.......100............
.......40..50.100..................
...50100.....
40.............10......80......sampling algorithm progress:
[%]: sampling algorithm progress:
[%]: ..20...70.................90..6040100..50...............90.........................10......
...............6050....60.10010................20.....
60..............100......20.
.......30..100Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
sampling algorithm progress:
[%]: ...70.....80..60...
.......................20........30........100..50sampling algorithm progress:
[%]: .............80....60.30
.....sampling algorithm progress:
[%]: .....70.......................examining piece 36911981..36952285 (40305 bp)
.....viterbi algorithm progress:
[%]: ......40.................1030....40....10..9010..................90......................70..50.............80..............70.20.100....10.40
..70....Warning: Block unknown_B is not significant enough, removed from profile.
..Warning: Block unknown_P is not significant enough, removed from profile.
....20.70.........40.20.............60.80..........30...70............sampling algorithm progress:
[%]: ...................50.............30.100..
.............70..
...50..40.................20.30examining piece 75350345..75402198 (51854 bp)
................80..50...............sampling algorithm progress:
[%]: 50...40.....80...80..........viterbi algorithm progress:
[%]: .....Warning: Block unknown_F is not significant enough, removed from profile.
..................60.....................60.9010..........40...90...50.............60...30.............60.............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
....8070......examining piece 64741607..64783241 (41635 bp)
.....viterbi algorithm progress:
[%]: .....70100.....10..
...............60...6090.....50...80.....80..............................examining piece 4674950..4719759 (44810 bp)
....viterbi algorithm progress:
[%]: .......10.20..40................80..90.7080............Warning: Block .unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
......................70.100..60.....20...90...100.......
....examining piece 4710257..4760390 (50134 bp)
.
...viterbi algorithm progress:
[%]: ...............2080..10.9090...............100............50....
.....30........50...70....90sampling algorithm progress:
[%]: 70.......90..........100........30..
......sampling algorithm progress:
[%]: ................30......80.10..............100.....
.........20....80.....................20.......40...................60...100examining piece 56227354..56278422 (51069 bp)
......90viterbi algorithm progress:
[%]: 70.40.40.10.....30......examining piece 29525977..29564045 (38069 bp)

..80.viterbi algorithm progress:
[%]: 90..................10.........90.........90...........40........90.......................50.......50..10010sampling algorithm progress:
[%]: ...
.50.50examining piece 37545131..37589355 (44225 bp)
......20viterbi algorithm progress:
[%]: .100......30.............10................
.....90....60..................70........100..............90.
...........20....70Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.....10...60.30....60......................sampling algorithm progress:
[%]: ......1060...........80.examining piece 14434267..14482901 (48635 bp)
.....viterbi algorithm progress:
[%]: .............................20.......40.......80......20.....90..10..............20.....40.........70.30..70.........10....100..70..80..
...............100......examining piece 13925609..13970703 (45095 bp)
20....viterbi algorithm progress:
[%]: .............20..............................
....50........30.................30.80................10010802080......50100...........................................40.....30.90...60.30...
........40........sampling algorithm progress:
[%]: .100.......40.........
.90...20
..examining piece 9509183..9552146 (42964 bp)
.....viterbi algorithm progress:
[%]: 50.......90..30............90...90................30....................70.................50...10......60.....sampling algorithm progress:
[%]: ..........100...sampling algorithm progress:
[%]: .....100.sampling algorithm progress:
[%]: 5060............10.
40...60...................30...100..............20100........70..10.10040.40...80..

......
....................60................10.............10..
..............8020...
/gscratch/srlab/programs/Augustus-3.3.2/bin/augustus: ERROR
	Invalid block no. in SubstateModel::blockNoOfB

..............30.20..............sampling algorithm progress:
[%]: ..........4090.........5060.......................70..30.90...Warning: Block unknown_A is not significant enough, removed from profile.
.....20.......50..20.......10............40..........100..............examining piece 16259091..16345238 (86148 bp)
.....70.......100.40100examining piece 28429083..28475416 (46334 bp)
...viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ...
....
.
...30..20.................100.....80..50....30..........3050..40..50..............sampling algorithm progress:
[%]: .examining piece 8788549..8869489 (80941 bp)
......50......30.....70...........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
..10.....Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.........10.........60.viterbi algorithm progress:
[%]: ........60.........70......examining piece 31283927..31331856 (47930 bp)
...60.....90404040viterbi algorithm progress:
[%]: .....40...........examining piece 33622521..33664463 (41943 bp)
.................sampling algorithm progress:
[%]: ...60......10.viterbi algorithm progress:
[%]: ...10...20.
.......70..60..........50.............................................sampling algorithm progress:
[%]: .....................50.10....50100.80..........20.......
8060.....50.....2080...70...................30................................20..10.....70...90........70..............90..70.60..........60......10.60.70........30..................80...........80...30..............40..100.Warning: Block unknown_L is not significant enough, removed from profile.
....
.60......................10.............................90..40.90.40...70.............70.....examining piece 44352176..44406639 (54464 bp)
.80.....viterbi algorithm progress:
[%]: ...........90.......20.................100......
......50....20..30....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
..50............5080........8070.......8080..................80...60....90....examining piece 50618474..50656353 (37880 bp)
....viterbi algorithm progress:
[%]: .......100........60.......
....50.60.....30........................100.....70.....10.........sampling algorithm progress:
[%]: ....20.1090......Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.
.....90...6080.........................70.....80...............70....10....................20.40...........30...100.examining piece 33012649..33050468 (37820 bp)
....viterbi algorithm progress:
[%]: .....sampling algorithm progress:
[%]: .
......90100..........90...
..20.80.40............................20..10......9010.......70....1010090.......
.......90..........30.........50..90...............90...30..20........20..........20.............100.......40........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..................
....100.....3030...10030..
...examining piece 1718785..1758345 (39561 bp)
..
..viterbi algorithm progress:
[%]: ...............5080.............40..60...........40...40....examining piece 40791804..40829596 (37793 bp)
...viterbi algorithm progress:
[%]: .......100....100........1060..................
.........50
....40......sampling algorithm progress:
[%]: .........50..........Warning: Block unknown_J is not significant enough, removed from profile.
.Warning: Block unknown_Q is not significant enough, removed from profile.
.examining piece 16716294..16756578 (40285 bp)
.10.70viterbi algorithm progress:
[%]: .50.100..90.....8020...........70....6050............sampling algorithm progress:
[%]: ...........60.......
.........10....examining piece 3042129..3092045 (49917 bp)
......9080.......sampling algorithm progress:
[%]: .10..............60...viterbi algorithm progress:
[%]: ..7030.......examining piece 61153147..61191071 (37925 bp)
....................20........10............viterbi algorithm progress:
[%]: ....30..20...90..............20..60....10.80..80.........................sampling algorithm progress:
[%]: ........40.................7020.100.......30...
....30................100........9030.....30.............20...................100.
..10...........50.....30.......
..100.....
40..............80.....90.........4010....30...........20.......10..examining piece 13300805..13341240 (40436 bp)
.viterbi algorithm progress:
[%]: .40.......40...50........sampling algorithm progress:
[%]: .......60.....70.....20..........................40....30.............90.......sampling algorithm progress:
[%]: .......50......60......100..................
....10.......Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
..90............3050..50....50.10...4070....................40...60.....40.....60.70...................................20.....examining piece 9279824..9317856 (38033 bp)
.100......viterbi algorithm progress:
[%]: .....50.......
.10..60..60......20..........20.....40..80..Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
8070...........80.........................60sampling algorithm progress:
[%]: ...........30.....60...10...................70........................examining piece 22081319..22119513 (38195 bp)
.......viterbi algorithm progress:
[%]: 90..80.....10..............70...30.....................20......70.................40.....90.50.......20.....80.......100.....20....
..........90.....10.........................70......508030....70.80..........50.....40.................90...9030....100........
.....30.40.......................................90..........100......20606050..90...100.......
......
.....examining piece 19188736..19227125 (38390 bp)
.....30......viterbi algorithm progress:
[%]: 50..........100.........
60100..................sampling algorithm progress:
[%]: ..80...70.....50.40....................70.70....100.......Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
........
.......
.......10.........3010...80......80.....60...sampling algorithm progress:
[%]: ....70.......Warning: Block unknown_C is not significant enough, removed from profile.
....60....100.......20..50....90examining piece 58939200..58979602 (40403 bp)
examining piece 5780241..5822613 (42373 bp)
........4040...............viterbi algorithm progress:
[%]: ...
..........20......1090..90.......100......30
examining piece 32446414..32484266 (37853 bp)
.viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ..20........................sampling algorithm progress:
[%]: 40.......................20......7010040.......
.sampling algorithm progress:
[%]: ...50...60........................................3010........80...50........3010........10.......................................100..............4060....
.50.20.....10.....6070.......................Warning: Block unknown_A is not significant enough, removed from profile.
20................8050...40207070....30...........................80..........sampling algorithm progress:
[%]: .......................80.60..40.....90...............80...examining piece 20205218..20251767 (46550 bp)
......viterbi algorithm progress:
[%]: .60.......70..10..examining piece 39753438..39791221 (37784 bp)
..30......70..........5050..90.70....................90.....viterbi algorithm progress:
[%]: ........30....20....................60........100.60.......
....80................100..90....10..4030........................70................90......6080................40.....100......................
.80.10........100.100....50.
....100...80.......50.
.
..................40.......9020...20...................20sampling algorithm progress:
[%]: ......60.70.........90......100examining piece 55502995..55570669 (67675 bp)
.sampling algorithm progress:
[%]: .
viterbi algorithm progress:
[%]: 70.....60.........................70...................30.........50........10...10........Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.80.80.........50.....Warning: Block unknown_D is not significant enough, removed from profile.
............70..........30....2080.....40.......10090....30.........
......80examining piece 11708371..11746448 (38078 bp)
........20
.........10.......viterbi algorithm progress:
[%]: 30...100..50
..............80....examining piece 1419556..1467527 (47972 bp)
..viterbi algorithm progress:
[%]: ...sampling algorithm progress:
[%]: ..........90...........40.sampling algorithm progress:
[%]: ......10.examining piece 18419130..18462624 (43495 bp)
....viterbi algorithm progress:
[%]: ............7030..60......60............90................4050...10....90.................90..........10...Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.Warning: Block unknown_W is not significant enough, removed from profile.
................10.60.40.20...10......90.........................100......20.......
.....examining piece 15680418..15719886 (39469 bp)
70..3020.........10..........40......50...90..viterbi algorithm progress:
[%]: .................50.80...40..70......................20.......30...............50...50100..90..30....60.....20...................Warning: Block unknown_A is not significant enough, removed from profile.
...
............70.10060.....
...........40...................40100..30....70..70examining piece 35297519..35336292 (38774 bp)
.......sampling algorithm progress:
[%]: .......................30.viterbi algorithm progress:
[%]: .....
..........80..Warning: Block unknown_A is not significant enough, removed from profile.
.....80.......10..50.30.............20.........80..............50.....examining piece 30423806..30481879 (58074 bp)
..90....20......viterbi algorithm progress:
[%]: ..4060.......................
/gscratch/srlab/programs/Augustus-3.3.2/bin/augustus: ERROR
	Invalid block no. in SubstateModel::blockNoOfB

...............30100...40.
.30..........608090......40..................................40...............80......50...40.............50100........60
...............10...........2050.90.60Warning: Block unknown_A is not significant enough, removed from profile.
.....70..............50.......100...50.........70.............60.............70....
Warning: Block unknown_D is not significant enough, removed from profile.
........80..examining piece 19751890..19823806 (71917 bp)
..................viterbi algorithm progress:
[%]: .60.....20.80..40...examining piece 34603771..34651875 (48105 bp)
.viterbi algorithm progress:
[%]: ..90...60....examining piece 52824902..52864292 (39391 bp)
.viterbi algorithm progress:
[%]: ..60.................................70......100..
..............90......100..10.70....sampling algorithm progress:
[%]: ...10.....100.................60.60..90.........
.....70....20.........90....80.............80..
....30........20..80......80.......examining piece 26514183..26560960 (46778 bp)
..viterbi algorithm progress:
[%]: .....30.....................sampling algorithm progress:
[%]: 10.........80..................100..........90......
.....1040..70.10..........30..90......10.....................10020.....70..sampling algorithm progress:
[%]: .....100.............50..................30.100....30....4050
...90....sampling algorithm progress:
[%]: .20....70.10..20..
.......................sampling algorithm progress:
[%]: .40...70...40........60...........100......20..........
.......50......80..............................10............309010100examining piece 6540538..6578459 (37922 bp)
70
.viterbi algorithm progress:
[%]: 60.................sampling algorithm progress:
[%]: 
10...30............................30..........70...40......50.......sampling algorithm progress:
[%]: .............50...sampling algorithm progress:
[%]: .....20.......10.......80...10............80.......50.10..............20...60..........100..........10.......80...................90...40......10..60....................30......20...90...............20....100.20100.
90..........40.....
........70.........30......................6020................30...........40....30.80..100..........30.........
.......2080.................5060.......60.40....30..40....90.....40.....sampling algorithm progress:
[%]: ..............100......50...........50....40................50..40...........100.70..
..10........
.50.....sampling algorithm progress:
[%]: .....40..................................examining piece 45479620..45522978 (43359 bp)
.50...viterbi algorithm progress:
[%]: 902060.................60............100.50..........50...................
.......50....30............60.....7010....
...........30...60..............10....60...sampling algorithm progress:
[%]: ..40...60......8070...........60.......sampling algorithm progress:
[%]: ...............8060...........80........sampling algorithm progress:
[%]: .50.........20...70.....60................................70.........10...............6090..20.80.........70........70.......7010................examining piece 37096624..37139597 (42974 bp)
...................viterbi algorithm progress:
[%]: ........70........80...........100..70......3020.
.........................................20.80...8090.90...80..20...30...................70.........80....40...10..........30....90..90.............70100....90.............30.............10..40.............90...100100.....
...20
90.
.examining piece 24859437..24901973 (42537 bp)
........viterbi algorithm progress:
[%]: .......40.....80.40........80.............4090.........70...................100........
..........100100...8050Warning: Block unknown_B is not significant enough, removed from profile.
...
....10..50sampling algorithm progress:
[%]: ...
...........5050..............Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
..100.....examining piece 85390..148353 (62964 bp)
.....viterbi algorithm progress:
[%]: .100.......20.....
...sampling algorithm progress:
[%]: .
..20.......60...................90..60......80....examining piece 14766488..14804406 (37919 bp)
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
........20.....10.60.viterbi algorithm progress:
[%]: .10...........30..sampling algorithm progress:
[%]: ......examining piece 19516559..19557767 (41209 bp)
.70viterbi algorithm progress:
[%]: ..60.............10........70..examining piece 49052609..49090401 (37793 bp)
....viterbi algorithm progress:
[%]: ...............................................10..50..90..10........40.............2070..80.......80.......20.20......100............10..examining piece 2562308..2601995 (39688 bp)
...viterbi algorithm progress:
[%]: .....
..........20.........30.....20..........70.....................50..90.90.......................30..30....80.30..30..............30.....1090....30....................20....100.90.....100......
...
...........30.60..40.Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
..............100........40..........40...40.
..90................20.80...50.40.......examining piece 12267425..12305298 (37874 bp)
....viterbi algorithm progress:
[%]: ...........................................50....40...70.......50...........60..5010......100sampling algorithm progress:
[%]: ..30..........
.................30....80........50.......Warning: Block unknown_G is not significant enough, removed from profile.
............10...60.70....examining piece 18654041..18704409 (50369 bp)
..40.............80....viterbi algorithm progress:
[%]: .6020...100..............60....90....20.......
..............40.80.............50.............examining piece 83148553..83193652 (45100 bp)
.6070viterbi algorithm progress:
[%]: .......30........30.......................70........90..........90............70...40................50..........sampling algorithm progress:
[%]: ...........80...40.40......40...100....50....
.....10.....................50.100...............70......80........60examining piece 77057831..77100772 (42942 bp)
.100
..viterbi algorithm progress:
[%]: ..10..80..........
........90.50..60............50..............60....7090......10..........sampling algorithm progress:
[%]: ......................2010.sampling algorithm progress:
[%]: .................20......90.80..........100............
...90............1060............80..60..10...........30.90.........20..........examining piece 59835286..59889052 (53767 bp)
.............70........viterbi algorithm progress:
[%]: ........50...20....100...20.
................100.100...60....
.....4030....examining piece 23488453..23531859 (43407 bp)
70
....viterbi algorithm progress:
[%]: ...............30.30....30....70....................10.....70.....sampling algorithm progress:
[%]: ...100..30.50........20.9040............80.40....40.............................examining piece 27581263..27619370 (38108 bp)
..............10....................viterbi algorithm progress:
[%]: ..80.50....1060.....50..........80..50........10..............90..20......Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_J is not significant enough, removed from profile.
............
...60....................60..........60.90..70sampling algorithm progress:
[%]: ....90....70.....30...........80.......60.....70.........9030......100....7010...40.........100.......90.
.....20examining piece 75861864..75905857 (43994 bp)
....80.40viterbi algorithm progress:
[%]: ..................80................................80................20........50..........10........sampling algorithm progress:
[%]: .....90......90...................100......20......90........
.70.100...60...3010.100.........100..
....
......
...........100......
.50...10100......
..40..8070......sampling algorithm progress:
[%]: ...
..sampling algorithm progress:
[%]: ..........70....sampling algorithm progress:
[%]: ..20......30.....................50....80.....80...10.....20.....20......10......40.............Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.......30..................90...20..10..................20........................examining piece 32835631..32873441 (37811 bp)
30....viterbi algorithm progress:
[%]: .......sampling algorithm progress:
[%]: ..40.....Warning: Block unknown_J is not significant enough, removed from profile.
...10030...30...
............30..........30........90...............20...........40.10........40.40...90.........5050.......................................50....50..examining piece 34780219..34831096 (50878 bp)
......viterbi algorithm progress:
[%]: ....examining piece 59496727..59536008 (39282 bp)
.....viterbi algorithm progress:
[%]: 10....50........40..30...50.....60............40....6060..................60.......10..40............2080...............................6070...70.......examining piece 56455726..56494583 (38858 bp)
...viterbi algorithm progress:
[%]: .........60.....40..40............100............20..20...............80
50.......80..........60...10............10.100......60.................30......
.......90...7050..9090.5050.......30..................sampling algorithm progress:
[%]: ..........................100..100......
....100.......
..........10030.....................608020.10..40.........60...
40...60..................................60......70.......20.....
.......30........Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.....5090..examining piece 45747707..45788983 (41277 bp)
............20.70....20..viterbi algorithm progress:
[%]: .4060.70..........30.........sampling algorithm progress:
[%]: .50.70.examining piece 39315553..39357923 (42371 bp)
.....examining piece 8234636..8279822 (45187 bp)
..40...viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: ............70...70.......100..70.........
................6040...........10.................80......50.....90...........50......................50....10..20.........10.........70.....70....80....70.............80...60.....60.60.......90.30.............30.......................................sampling algorithm progress:
[%]: .....10...60.......2070...80..............................40........100...20........
...70......90......examining piece 49909563..49962335 (52773 bp)
......80.viterbi algorithm progress:
[%]: ...............90....80...........20.......8050........90..........30.......90..70.............70..............10....80........................examining piece 4645515..4694818 (49304 bp)
...60..80....100.100.....
.....10.
......30....viterbi algorithm progress:
[%]: 30.......100.......80..40....40
.100...............
70...80.8090.............100....sampling algorithm progress:
[%]: ....................20.80.......
.....sampling algorithm progress:
[%]: ........20..50..90....10.Warning: Block unknown_K is not significant enough, removed from profile.
80.................30...............40................20..90...................................90examining piece 45983231..46022712 (39482 bp)
...viterbi algorithm progress:
[%]: ......10010.30..60
...............30.....30...........90........sampling algorithm progress:
[%]: ....80...40.40......sampling algorithm progress:
[%]: ..........100..........examining piece 11983145..12034944 (51800 bp)
.......viterbi algorithm progress:
[%]: ..
.90.............10.....5050...10..........20....10........70100................90........
......60..50...20...................40....20..40..10.....................70...100.....30.Warning: Block unknown_S is not significant enough, removed from profile.
...........40.....90
.30.......80...30.sampling algorithm progress:
[%]: ..50...........20.80......40...70...............examining piece 29505709..29543549 (37841 bp)
..................................40........10.9050sampling algorithm progress:
[%]: ......50...20......100viterbi algorithm progress:
[%]: .....................100......40........50....50..90100.....
.60.............2010.90...........100.................................6070100............30.....20......30......60...60..50.........

.........80..6030....70.................30..100.............
....40...............90.....
......80.......100.........40............10.......60..50...examining piece 45085785..45123715 (37931 bp)
100.....viterbi algorithm progress:
[%]: .
...................90.........50.....40...........sampling algorithm progress:
[%]: .sampling algorithm progress:
[%]: sampling algorithm progress:
[%]: ........70.5070..........6010..10............100...60.40..
...60......Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...
................
...70.......60.....10............10.70..sampling algorithm progress:
[%]: .....100........70................20............examining piece 44504282..44569403 (65122 bp)
..20.........viterbi algorithm progress:
[%]: ..............sampling algorithm progress:
[%]: 
.......2060..10.....80.......80.......20...80..........10.examining piece 41988052..42034340 (46289 bp)
..80...viterbi algorithm progress:
[%]: ...............70...............30..80........30.....90.....90..50..............................30...............................20...100.....
...10.1040100....20.
..40....9070.........70.....examining piece 58177106..58214985 (37880 bp)
...80viterbi algorithm progress:
[%]: ....sampling algorithm progress:
[%]: ..........40....9010.............50.......................3050..50.............50.......10..........30..............50......20..100................
........60.....30.....60..........20..40.............Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
....20....80.....examining piece 29798671..29836484 (37814 bp)
....viterbi algorithm progress:
[%]: 100....60....10....100.........
..60.............7020.90...............30.3080...50...........................examining piece 31127309..31165332 (38024 bp)
...viterbi algorithm progress:
[%]: ......70..............
.40......10....80..............60...........70.......40........70...examining piece 46710478..46749066 (38589 bp)
.40.....90.6010........viterbi algorithm progress:
[%]: ...........80.20.....20.Warning: Block unknown_K is not significant enough, removed from profile.
...30.4090.............70...............................................5030....50.20..........3010..........70..examining piece 12013304..12080059 (66756 bp)
100......viterbi algorithm progress:
[%]: .
..90..............................80.80....90.......sampling algorithm progress:
[%]: .........20...........40...........100.......30..60.100.100.......
80.....30
..........50.
..............30.....60...50................50............4040.............70....80.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_J is not significant enough, removed from profile.
.90.4070sampling algorithm progress:
[%]: ...sampling algorithm progress:
[%]: .........40...........60............................20.........50...............40.........100..70......
..50.examining piece 18442980..18480838 (37859 bp)
..viterbi algorithm progress:
[%]: .60....10.80....10..100...70...Warning: Block unknown_B is not significant enough, removed from profile.
.10..................
......50..........10................1060............................9060....20....examining piece 9184255..9230103 (45849 bp)
.....80viterbi algorithm progress:
[%]: 2090.50....................80....sampling algorithm progress:
[%]: .....90..............20......................80.........70...........30....70.......70.50....10................9030.........60.....100..30..........
....90..10...........70examining piece 32820492..32859969 (39478 bp)
.........90..206040.....................sampling algorithm progress:
[%]: .............80.viterbi algorithm progress:
[%]: ..........80..90..10040...40...........
...............20....50.10..20....................................sampling algorithm progress:
[%]: ...100..............80..
20..70...20.50.100....100.........50......70.......60.10
90
..........30......................30...........................2030..............................60....sampling algorithm progress:
[%]: 40...70.30...............30........40........sampling algorithm progress:
[%]: ...............80.......50.60..60..100...........10..80.80...40...
.....examining piece 11687902..11725706 (37805 bp)
.................80......viterbi algorithm progress:
[%]: ................70......60....4090..50.50.10......20...........................sampling algorithm progress:
[%]: ...........................................70.60......10..90..90.................30.....................10..........20........8060.........70......80.....90...20...............70100.........40...100......90....20.
..40...............80...........90.................30.....30.........50..30.....50......70...90
...30..........10090........
........................100........30.60.........10040....104010040...
........
.........
...60............80..100....10070...90
.....50.....70..
........50.......50.90.....................Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
...80...50...60.....sampling algorithm progress:
[%]: ..sampling algorithm progress:
[%]: ..........90.............100.....10060.80......Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
....60..6090
.......70......
......................10..10............examining piece 24703514..24741969 (38456 bp)
.....sampling algorithm progress:
[%]: ....100..100examining piece 41606443..41661474 (55032 bp)
..
80examining piece 26472551..26510415 (37865 bp).
.viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ....
......viterbi algorithm progress:
[%]: ......70.....................................20.20.90.....examining piece 25990233..26028316 (38084 bp)
.....viterbi algorithm progress:
[%]: ..10........examining piece 29913464..29952219 (38756 bp)
..10viterbi algorithm progress:
[%]: ......................70........examining piece 63715379..63753261 (37883 bp)
...100.......
80......Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.....sampling algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .70...3030.........60...10.90......20.10............10...Warning: Block unknown_A is not significant enough, removed from profile.
..................examining piece 1637695..1675484 (37790 bp)
......viterbi algorithm progress:
[%]: ..10.......90...20.......10...40...40....................80...30......................40.....20examining piece 2841469..2880284 (38816 bp)
....viterbi algorithm progress:
[%]: ........10....40..........100.20..50..
.5080....20..........20..................70..40...........30...........examining piece 40621105..40667760 (46656 bp)
.......................30.........viterbi algorithm progress:
[%]: ....603050..60...............2080......50....1070.......30..100........................
............40...........40......70....70....40.........20...........60...............60...........90.......examining piece 14130426..14174085 (43660 bp)
30..10......50viterbi algorithm progress:
[%]: ...40....................80.10sampling algorithm progress:
[%]: ......2080............50.........70..........60.....50...100...80...........................60.......10...........2090........70...90.......90..10..............50..80.
......................8040.20.........60....70..................10030..........
..100...........
....100.....20.....90100.30..30.......
..........90.....60..80.........80.....................................40......100...50.30....
...80...........70...sampling algorithm progress:
[%]: ...90...........30Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
4040...examining piece 2880285..2926188 (45904 bp)
50..60...............viterbi algorithm progress:
[%]: .100.................
....................100.90.4010..60
70..examining piece 17345542..17405686 (60145 bp)
...viterbi algorithm progress:
[%]: ........90........sampling algorithm progress:
[%]: ....sampling algorithm progress:
[%]: .........Warning: Block unknown_A is not significant enough, removed from profile.
..............30.......70...50.60......20............50......80.......
...50................examining piece 41289941..41327721 (37781 bp)
.1080.20...viterbi algorithm progress:
[%]: .............50...................30.70..10........100..sampling algorithm progress:
[%]: .................90..10.....80Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
100.....
.....................20..60......60............2010.40..100.....
...............
.20.......100sampling algorithm progress:
[%]: ...20.90..............70.......
..examining piece 25609603..25654597 (44995 bp)
..10viterbi algorithm progress:
[%]: ...50.....3030................60..............70..............................30.30.......9070...............6090.....40..........4080........................10............10Warning: Block unknown_G is not significant enough, removed from profile.
20.....sampling algorithm progress:
[%]: ............100..80.........40....40.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
70......50......50.40
............examining piece 31846923..31886378 (39456 bp)
.....viterbi algorithm progress:
[%]: .............20........................80..80...........70..........80....50.10...60..30...40...50.....60.....sampling algorithm progress:
[%]: .......10.20.......examining piece 2133605..2171394 (37790 bp)
.20...viterbi algorithm progress:
[%]: ....................100.......90...............90.
.....90................10...........70..60...............70......20......20..........40....60...........10010......
.....20.......................sampling algorithm progress:
[%]: ......3030...............90..........70.....80.80.........30..............80..30...10..30..........50....70........30...............................40.........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
......100.....20...90....80............20...
.50..................9040..40.......50.40..............40....30.....examining piece 42500164..42538007 (37844 bp)
.......60.....80.............10060..........viterbi algorithm progress:
[%]: .
.............6090......10.100.........40..........50..........sampling algorithm progress:
[%]: ......
.....100.............50.70.
.............70....50.....30....90......70.50.............90.100.....30.......10.
sampling algorithm progress:
[%]: ................60100...60..80.....80.10......50.....sampling algorithm progress:
[%]: ..................................60.........20............
......70...90........60..80........10....10.....90.50..............70....................30100.60.100.....80..40
.......examining piece 42621338..42659145 (37808 bp)
..20....
.......viterbi algorithm progress:
[%]: .20.............70...40........100..............
.20....40.90.........90.........Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.80.....30sampling algorithm progress:
[%]: ....sampling algorithm progress:
[%]: .....................100.................1010030....50...
.....
..............60..sampling algorithm progress:
[%]: ....40.80..10..30..70....100........Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
................100...........60.
.90.20........50...examining piece 74522967..74602498 (79532 bp)
.......20............10...................50..................examining piece 35028903..35066752 (37850 bp)
.sampling algorithm progress:
[%]: .7040viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ......60.9030......30..........................20.....
............Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
...Warning: Block unknown_P is not significant enough, removed from profile.
.......................80....10010.70..80.........10....40..
.40sampling algorithm progress:
[%]: .......70....10........50examining piece 33109056..33152910 (43855 bp)
.....20...viterbi algorithm progress:
[%]: .......100............sampling algorithm progress:
[%]: .....
.....80...........509020..examining piece 20949383..20987220 (37838 bp)
...30....viterbi algorithm progress:
[%]: ..................................50.......................................20.10...9010..........60.100.60.........
.30.............10.............90..50.....10.........60...30....40...20100....20..
.......70......................40.............30.......20.20..........90...70...30........80..80.....40......................50................................4050....10040.....40.Warning: Block unknown_C is not significant enough, removed from profile.
...90....
......40.30..30..........80.6060.............examining piece 15794998..15836275 (41278 bp)
30....60......50.....viterbi algorithm progress:
[%]: ....100......20..
.......examining piece 13704094..13749886 (45793 bp)
.............90...70.examining piece 26258495..26296632 (38138 bp)
..viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: .......50..70..........40.60...........50.40.......90...50............60..................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_V is not significant enough, removed from profile.
..........7080........70..........10.......90..............50................40.....Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_V is not significant enough, removed from profile.
50...100......10..
9080.examining piece 15928837..15969131 (40295 bp)
.......viterbi algorithm progress:
[%]: 60......60......................................70.......6090.20.100......
.......examining piece 59786561..59854213 (67653 bp)
............60.70.....60.........20.....viterbi algorithm progress:
[%]: ...........100.....
.50....50.............Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_AA is not significant enough, removed from profile.
.........7030........30.....70..........70................70.10.80..100.......examining piece 21552548..21595044 (42497 bp)
70..80..30...........viterbi algorithm progress:
[%]: 
.70...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
.......................60..examining piece 14741502..14786608 (45107 bp)
..viterbi algorithm progress:
[%]: ..40..60................80....60........80..90....examining piece 7692296..7730415 (38120 bp)
.....viterbi algorithm progress:
[%]: ..................80.....sampling algorithm progress:
[%]: ................8010.............40....40......80.50..90..........................100.......90..
.10..70..10.....90...10.............sampling algorithm progress:
[%]: .80.20...........20......70....................................20................20.100.........70
.6090......10.........90..................50...100......30...
...30..........20......30.100..........20.......
...........50.....10080.......40.....90............70.............80...40...100....30.90.....
.40..sampling algorithm progress:
[%]: ....
...50.................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
......100.............30......3060..
...4050.........examining piece 34549789..34604214 (54426 bp)
.....60....sampling algorithm progress:
[%]: ..............80...90....viterbi algorithm progress:
[%]: ......examining piece 53417664..53499520 (81857 bp)
.10.............50....100.50......10..sampling algorithm progress:
[%]: ....70.
........60......................................sampling algorithm progress:
[%]: .......20...viterbi algorithm progress:
[%]: ........40..60....20.....80..........................70.90..100..30..sampling algorithm progress:
[%]: ............10.
....................70.......60...9070......40..40100..70...............6010.30...........100..........
..........50............1008080...50..
....................20........20....80.60100......10...............Warning: Block unknown_M is not significant enough, removed from profile.
.......40...90..
........30.......70..70..................sampling algorithm progress:
[%]: ..........................90..100...8040examining piece 59553077..59590866 (37790 bp)
.
viterbi algorithm progress:
[%]: 90.....30.sampling algorithm progress:
[%]: .........5080......................................Warning: Block unknown_F is not significant enough, removed from profile.
....9010....50..................10.10...............10.............100.80..60...
....
20100.20...60.60....
40..20................examining piece 24705373..24784612 (79240 bp)
......examining piece 59771214..59810219 (39006 bp)
...viterbi algorithm progress:
[%]: ........50....sampling algorithm progress:
[%]: ............sampling algorithm progress:
[%]: 70....3030..........70........viterbi algorithm progress:
[%]: ....................20...............10......7050....40....80.................40......................10........90..........10..50................90.........examining piece 2608010..2655013 (47004 bp)
50......viterbi algorithm progress:
[%]: .....20...........30.....80.20..100....60....60....30..............100.....20
.......
70..60...10........................30......70................20.................10...sampling algorithm progress:
[%]: 80...90..70..................30.80.70............................90....40......................40.8010.....90...100...................100......40.....
..30.40.
.60............100...2010.
..examining piece 45226925..45272195 (45271 bp)
.9050.viterbi algorithm progress:
[%]: ....80....................................80..............50.100......sampling algorithm progress:
[%]: .
............8050.30.....80.........40.....60.....20....10.90.....30..Warning: Block unknown_F is not significant enough, removed from profile.
......10....60............50.................20......20......................20.50..examining piece 24260517..24298315 (37799 bp)
....viterbi algorithm progress:
[%]: 70..examining piece 39485248..39535251 (50004 bp)
.......viterbi algorithm progress:
[%]: .100......70
....30...................60.....10..........40..3020.....10...................................90..80......60.....80..examining piece 65442309..65484200 (41892 bp)
......40........40....20.60....................viterbi algorithm progress:
[%]: ....................5010.90...............90..................90...examining piece 9477252..9518283 (41032 bp)
.7030..50....70.....50......60..viterbi algorithm progress:
[%]: ..........30100......30...
80..........................................70...............70.......4080....100....20100.......60.....
............40...80100...10..................20...90.
....sampling algorithm progress:
[%]: ............50.60.........90.....90................7080.
examining piece 875763..927678 (51916 bp)
..viterbi algorithm progress:
[%]: .....20..........10..................100......
.....80.....................60..sampling algorithm progress:
[%]: ..309020.50.......70100...........
........90...80....30........1030.......1030Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
..Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
......70.......................................10..examining piece 31545515..31583316 (37802 bp)
...viterbi algorithm progress:
[%]: .........20.....40..............4090......sampling algorithm progress:
[%]: ..9090..........70..60.9040................50......30..20.100.......10....................40...............
...........80...10.60...40.....100..........
..50............examining piece 75410..129011 (53602 bp)
......viterbi algorithm progress:
[%]: .....................5070....8040.........100..........2020....
..............100......70...3080....60...
.........sampling algorithm progress:
[%]: ...................100...................
.60..30...90..70.......90..90.........10................10...........80sampling algorithm progress:
[%]: ...50.100..sampling algorithm progress:
[%]: .....
.80............30............40.......................10...4070.....20...80......90..............examining piece 51710144..51757872 (47729 bp)
.....viterbi algorithm progress:
[%]: ........100.....Warning: Block unknown_L is not significant enough, removed from profile.
.......205010.
.......50.....100.....
......30.....50...examining piece 4933114..4992835 (59722 bp)
...viterbi algorithm progress:
[%]: ............3040............examining piece 34481544..34519417 (37874 bp)
20....100..100....viterbi algorithm progress:
[%]: ...sampling algorithm progress:
[%]: ....60......
.....4020..40...30...........................
........1010.............50...60.......50..sampling algorithm progress:
[%]: ...Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.....70............100.....20............3050..60....................90.................60....30....examining piece 39062728..39104213 (41486 bp)
....50viterbi algorithm progress:
[%]: ..10...70....80........
...........10..........30....10..40.......90........40...80....70.............10......20..50.20............90............90...60.............................80..60...........50....40..........80100.....
.......30..........sampling algorithm progress:
[%]: ..100...7020.
..........100........90......60...............
80......60...40.40...30...70....Warning: Block unknown_O is not significant enough, removed from profile.
..20...sampling algorithm progress:
[%]: .....10060.....
..90..................30...........examining piece 33478794..33516724 (37931 bp)
...viterbi algorithm progress:
[%]: .50....100........
sampling algorithm progress:
[%]: ....70........10....examining piece 16750163..16788093 (37931 bp)
...viterbi algorithm progress:
[%]: ......................................1010.......60....10....70.................10Warning: Block unknown_I is not significant enough, removed from profile.
..40........Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
40..80.....................................examining piece 24275523..24313444 (37922 bp)
....7020.viterbi algorithm progress:
[%]: ...............20...20..20........20.50.examining piece 33842420..33880230 (37811 bp)
................viterbi algorithm progress:
[%]: ...........90................30.30....80...70.....50....70...30.100.........................30..10...80........30..40..100.......
50...90..80.........40..
...................................50.30...................100.40......
.......50.....60......40............60...............................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
......50.........examining piece 10321898..10370633 (48736 bp)
.viterbi algorithm progress:
[%]: ..90......706060sampling algorithm progress:
[%]: ...20examining piece 18575396..18615599 (40204 bp)
..viterbi algorithm progress:
[%]: ..90.80....40.........50...........70..........................80.4060.60.....10...............90........80.70.10.........10............10............90.................20..........50...............70.....10.......90...60...100......8020
.80...........30....100.....................2020..
..........................30.80..........40..10..............70..20.60....9070.........................20.sampling algorithm progress:
[%]: ..50...90.examining piece 43219439..43257606 (38168 bp)
...viterbi algorithm progress:
[%]: .70.....................30...90............90.30...............3010..............90.......60...........10..............20.........100.....2040....
.20..70...........50..........................100....70....
.................20sampling algorithm progress:
[%]: 80......30..................50......30.....30..40..........................80...10.....40.......8030.......................40..80...............100.....20.examining piece 24138590..24181296 (42707 bp)
80..50viterbi algorithm progress:
[%]: .........40.......90..6040........
...................40..........10090..30.....60...40...............................100.........
.....10..30.........50.sampling algorithm progress:
[%]: 40.70.50...........50..........
...100..........70............50..50....90.....80.10.20....
.60......100.......................Warning: Block unknown_J is not significant enough, removed from profile.
.............60........60..90..
....20..60.....................examining piece 14540270..14587689 (47420 bp)
..100viterbi algorithm progress:
[%]: .....90..........70.......100.....

.30......80......30.7050......sampling algorithm progress:
[%]: ......100.............80.
.............60..sampling algorithm progress:
[%]: ........90....7010....40..sampling algorithm progress:
[%]: ..............sampling algorithm progress:
[%]: .40..50.90........6060.....80...........Warning: Block unknown_H is not significant enough, removed from profile.
...................50.....10......10..........10100......
........................50100.....examining piece 11943735..11986552 (42818 bp)
.5090...20viterbi algorithm progress:
[%]: ........90..Warning: Block unknown_F is not significant enough, removed from profile.
.60...
........20...........80..............20.10.....................20......sampling algorithm progress:
[%]: ..........70....30Warning: Block unknown_E is not significant enough, removed from profile.
.....60.examining piece 56567341..56605139 (37799 bp)
..10...viterbi algorithm progress:
[%]: ......................100..........................
.30.............40100examining piece 35126259..35164165 (37907 bp)
....30.80........
viterbi algorithm progress:
[%]: .....10.20..sampling algorithm progress:
[%]: ....70..10...90..60....30..............50.70..............100...........90...40.......10........20....70.......sampling algorithm progress:
[%]: ..
........................60.............20..............100....1020...
....20.70.......30...40..50.........40......70...........10..................30.................100...................30..
.80.....................6030...40sampling algorithm progress:
[%]: ..........50.....2080...30...........40............90........sampling algorithm progress:
[%]: ..50.........80......................................40...70...100.........
603060.Warning: Block unknown_C is not significant enough, removed from profile.
..Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
...40.10....100.............50...60............10....50...........70..
......70...90.........80.............4040.........50....................50.8020...........20examining piece 15503833..15549360 (45528 bp)
..................viterbi algorithm progress:
[%]: ...70.....80..................90.50.....Warning: Block unknown_H is not significant enough, removed from profile.
90..60.............100...........30..70.....
.......30.........100.60......60
30...........sampling algorithm progress:
[%]: ......100.......60.
...80.examining piece 3173090..3232467 (59378 bp)
....80sampling algorithm progress:
[%]: .50.viterbi algorithm progress:
[%]: .60....90..........10.......40............70......20.....................70..40.10.....70.10...............................50..90.80...........70...............................examining piece 23980076..24030044 (49969 bp)
......viterbi algorithm progress:
[%]: ...20...80...50.......80.80.20..........10......60........................100.............20.
60.30........examining piece 30947514..30985315 (37802 bp)
...........90............10............7060....30.viterbi algorithm progress:
[%]: .90.....80............40..........90........70..........100.........
.....70..........20...100......80..50...........40..100
.70......90
................70......20......100..100....60....
......90.............5090...........30...30.Warning: Block unknown_K is not significant enough, removed from profile.
.80.......70..............90.100sampling algorithm progress:
[%]: .examining piece 13095939..13140395 (44457 bp)
...viterbi algorithm progress:
[%]: .
..........Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.....................60..........80examining piece 11627361..11681770 (54410 bp)
80....viterbi algorithm progress:
[%]: .............90....10108040................examining piece 42682467..42720917 (38451 bp)
.viterbi algorithm progress:
[%]: .........80.......90..100..................7040.
................20.20
.100.......30...
.....100.......
examining piece 29754380..29794725 (40346 bp)
...........sampling algorithm progress:
[%]: .........viterbi algorithm progress:
[%]: .......sampling algorithm progress:
[%]: 8050..3010.....30......examining piece 34265571..34311819 (46249 bp)
..........40........viterbi algorithm progress:
[%]: ...10.............100...........................80.....4010.90Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
40.90..10....90....................................10......
..................20...examining piece 25216178..25254402 (38225 bp)
50.....viterbi algorithm progress:
[%]: 20..examining piece 4808764..4846583 (37820 bp)
.....50....100...10...viterbi algorithm progress:
[%]: ..
...100..................60..20.......2030............40........60......10..30............
.60.....60.10......................20...40........................20..70...........20.....40.sampling algorithm progress:
[%]: .........100.....70.20.......50...............100.
....................80..............50.........10.sampling algorithm progress:
[%]: ....
.70.........80.30...examining piece 56952489..57005776 (53288 bp)
...30.....30..60.30..........90....sampling algorithm progress:
[%]: ......60...........20viterbi algorithm progress:
[%]: ........................30...10.........30....90.......30100..sampling algorithm progress:
[%]: .10..50
.....40..10..70......30...............................90.40...............40....20.............10.80......100..80......40......
.....90............50.....40...sampling algorithm progress:
[%]: .......30..............20...40.....20....40.50....90.............Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.50................40....10..40..........................................10030..60....
.......60...........50.......20...examining piece 19874907..19912738 (37832 bp)
...viterbi algorithm progress:
[%]: .................30............50.........70.40..50.......90.60..........30.....60............................5010...70............50.....8070...................40.....................40..........60....................80.examining piece 8193639..8231497 (37859 bp)
.60...viterbi algorithm progress:
[%]: 90...50....20................70...........60.........80.......7060.50.............90....100...60..
70.......50.........100........10..................
.....100...30.....
.40......50...70.................80....................80......70...50.......20Warning: Block unknown_A is not significant enough, removed from profile.
90......80.sampling algorithm progress:
[%]: ..........60..........60..............90.....60..Warning: Block unknown_L is not significant enough, removed from profile.
....70....examining piece 30474082..30516054 (41973 bp)
.....50.....60.40.............90.................10.viterbi algorithm progress:
[%]: ..100........30.examining piece 43109285..43154800 (45516 bp)
.100..viterbi algorithm progress:
[%]: .....
................90.....100100......
.70
..70.80...
.........70.......20............................50..............10.sampling algorithm progress:
[%]: ..4080.100..60.......................1030...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.100.............
.........8080.........examining piece 27848172..27886096 (37925 bp)
7010......20........
.........examining piece 32192677..32245451 (52775 bp)
90...viterbi algorithm progress:
[%]: .80..viterbi algorithm progress:
[%]: .......40...20.50..90.......20...60..20........................70.......................sampling algorithm progress:
[%]: ........5030..100...90.30....
....................................80.60.40..........sampling algorithm progress:
[%]: ..examining piece 44736743..44778577 (41835 bp)
..............viterbi algorithm progress:
[%]: 60.40............10...30..10.......50..90................100.................
.sampling algorithm progress:
[%]: .......100..10.....50...70..60....
......70.......7020.........10......70.................70......................70....20........608040....sampling algorithm progress:
[%]: ....9020.40..........30.......................80...80...................................30..90.10100...30..8080.......10....90
40....................................................100.80..100.20
..40...
40.......50...20....sampling algorithm progress:
[%]: ...........................................90...........examining piece 21624938..21666754 (41817 bp)
..50.50viterbi algorithm progress:
[%]: 50.......20.....60.........30...............90...................................10100....80..60.....
.60....10.....examining piece 12715540..12755559 (40020 bp)
..70.viterbi algorithm progress:
[%]: .......40........10..sampling algorithm progress:
[%]: ...................20...........................9010..70...60...10.examining piece 16954791..16993560 (38770 bp)
....viterbi algorithm progress:
[%]: .8030.....50.90........30.......................80.9070..........100.........30......20....10.....1090
...802040...90...........60..........................................................60..20.......10050..sampling algorithm progress:
[%]: ...
.....30..5090........40...70....20.........90.............30.....30.........30.10......50.100....60.................100.
..........
40........80...........20............40............30...........70..................30.........50....sampling algorithm progress:
[%]: ..40..705050...90...................................examining piece 23748766..23788444 (39679 bp)
.40.....................viterbi algorithm progress:
[%]: 10.Warning: Block unknown_H is not significant enough, removed from profile.
.....40...40.............70.100......80...
5060..........................20.100............50....................examining piece 46462037..46509628 (47592 bp)
60.60....60.......viterbi algorithm progress:
[%]: ....50.90...
..30.........70.80.......................70..........Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
.....10..........40............70..........100...90.
...80....60....10.......examining piece 6789334..6832855 (43522 bp)
100...50.60...viterbi algorithm progress:
[%]: ...........sampling algorithm progress:
[%]: 80...................70.80....90..............
.sampling algorithm progress:
[%]: ...80..2060....100.............20......10....20......100100......
.......60
........70...70........90.70.......................20.........70.....10.................80................30.....80...
/gscratch/srlab/programs/Augustus-3.3.2/bin/augustus: ERROR
	Invalid block no. in SubstateModel::blockNoOfB

30.100......30...80
.......Warning: Block unknown_C is not significant enough, removed from profile.
........50.sampling algorithm progress:
[%]: .......20.90................80........sampling algorithm progress:
[%]: ....80..............40............examining piece 23512600..23550437 (37838 bp)
100.....viterbi algorithm progress:
[%]: ..90..
..............60.....30..10..............9090............50.40..........40..............90.90....20..1010.......................40...................60..90examining piece 44706126..44748463 (42338 bp)
Warning: Block unknown_Q is not significant enough, removed from profile.
.....viterbi algorithm progress:
[%]: .....30...90...............80.100...............
...............50........10070.examining piece 42118000..42155843 (37844 bp)
40..viterbi algorithm progress:
[%]: ...
..20........20.50......................10.......100....100...50sampling algorithm progress:
[%]: ......40........
....100508060..............
...........10.........60.............
.................30.....90......2030...70.10......70......100....90..100.........Warning: Block unknown_Q is not significant enough, removed from profile.
..............
..100.60..Warning: Block unknown_Q is not significant enough, removed from profile.
..
...............80....40........80......20.........20..examining piece 5092479..5130289 (37811 bp)
....30.......40...90...viterbi algorithm progress:
[%]: 
......60........examining piece 55779949..55817789 (37841 bp)
..Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: .....70.........90..100.........100sampling algorithm progress:
[%]: .50sampling algorithm progress:
[%]: 10
..............30...........30.................
..100sampling algorithm progress:
[%]: .70....Warning: Block unknown_A is not significant enough, removed from profile.
......50
......10030...10.
..60.......1010..examining piece 86878815..86917591 (38777 bp)
....viterbi algorithm progress:
[%]: ...
....40.................................1040.....50....sampling algorithm progress:
[%]: ..examining piece 45492080..45533707 (41628 bp)
.....60....viterbi algorithm progress:
[%]: ...................20.........100................60...................20sampling algorithm progress:
[%]: ..10..70..Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...sampling algorithm progress:
[%]: .....40..5010..2020.........2060..........80.....30........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
...........10.50.....................................10..
.70...........20...............20....70...sampling algorithm progress:
[%]: ........4060.30......examining piece 49893950..49935996 (42047 bp)
......viterbi algorithm progress:
[%]: ...70.................1030.20.examining piece 29826068..29867233 (41166 bp)
..20...viterbi algorithm progress:
[%]: ........10.....70........30.50.....20...................................50................30.........................30.70..40.............608080...........10...80...........1010....................20........60...........30...40...80...............40...30.40........50..........80.40...........................................30.50..70.........90.90...............20....20.................90.90..60.......40....20....30....60.........60..90.....50.....70...80.........................50................20......................50100.........70....40..
................50.......3090100....70..40....
.......100.............30.40.
.......60...........30100......................
..100...100.....50
.....sampling algorithm progress:
[%]: ..8070...........60......80.....80....Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
...70..........40..60...40..Warning: Block unknown_F is not significant enough, removed from profile.
........50......40sampling algorithm progress:
[%]: .
..................70examining piece 38043610..38106507 (62898 bp)
.60....90....viterbi algorithm progress:
[%]: ....50.................60......40.....7090......10.....examining piece 45929263..45967202 (37940 bp)
.10..............................viterbi algorithm progress:
[%]: ...30........examining piece 8565829..8616221 (50393 bp)
..50...viterbi algorithm progress:
[%]: 100..........
....60...........sampling algorithm progress:
[%]: ...20..80................50..100.......80...
........80....90...............80........30.70.........10..20....7050..........................6010.................7070...40...........................90.................20....Warning: Block unknown_A is not significant enough, removed from profile.
............50....60...........90...........60..30.........................80....10....100.107060.....100..5080.examining piece 38425454..38465484 (40031 bp)
....viterbi algorithm progress:
[%]: 
..4030.........
.60.....examining piece 30057794..30095802 (38009 bp)
......20..90.......80.......viterbi algorithm progress:
[%]: ...........70.............................80.....40.....10...100..........40.sampling algorithm progress:
[%]: ...
.80..........80........90.................90.......Warning: Block unknown_B is not significant enough, removed from profile.
............................2090.sampling algorithm progress:
[%]: ..10...........5020................70...70.....50...............3070....100..examining piece 22669034..22714791 (45758 bp)
..20..viterbi algorithm progress:
[%]: 
.......80...80....10010..20.90.30....
..................50........100....90.......................20..
........30.....60.......40..................60....................100....3010..80.......
.......40..100......examining piece 20545868..20583693 (37826 bp)
...viterbi algorithm progress:
[%]: ..................
40....50..........40..sampling algorithm progress:
[%]: ...........80.....50..................3030.......1070............sampling algorithm progress:
[%]: .50......70....20....100.10....80..examining piece 22126341..22166246 (39906 bp)
examining piece 52716..103680 (50965 bp)
.10..viterbi algorithm progress:
[%]: ...60.
....10060........viterbi algorithm progress:
[%]: ........................
..60.........60......20.........20....................60...70.................sampling algorithm progress:
[%]: 10...90..........70.10....30..................30.80...............70.........50.80...30......90.....sampling algorithm progress:
[%]: ................80........90.....20...........40..............1040..............10...........90.80........10...40......20.90.............4050..........................90....................100.......80...
..90.100.....20..
.....30...........60.....20.40............90................50....100......2030.......30....50..9070...............70.......100...30..........100...
60
.40........90..30.50....40.......
..80.........................examining piece 23711880..23749702 (37823 bp)
.60..viterbi algorithm progress:
[%]: .........40.............50...............50...90......sampling algorithm progress:
[%]: .......30........40...........10..examining piece 55867873..55905782 (37910 bp)
....sampling algorithm progress:
[%]: 60.100Warning: Block unknown_F is not significant enough, removed from profile.
.............60...........100..viterbi algorithm progress:
[%]: .......
.
...............10...50...................60.10........20.examining piece 7681938..7719820 (37883 bp)
...70..50viterbi algorithm progress:
[%]: .....70........sampling algorithm progress:
[%]: ....................20..................................60.70...8020.....2030...........8070...10.40....50.......10....60...........30.........................60...............30.70....30..70.40........90.........90.20..........................40.....20..100....80..........examining piece 50333884..50371790 (37907 bp)
....viterbi algorithm progress:
[%]: ..................40..........50.100..
......40...
.....70...30...........70...50....................10....................50................80......40.........5060.40...30....80.70....90.....6090......................50...........60.20..Warning: Block unknown_C is not significant enough, removed from profile.
..........80..50..80..80............70...sampling algorithm progress:
[%]: ..........90.90........70.........................examining piece 24718021..24830354 (112334 bp)
........70.90...........60..................40.......30.................60...10....50.....80...80.....viterbi algorithm progress:
[%]: 90...90.........80......70....90..........................................10......40.........20........90.......90.....100...80.....90....100..80
...............50......100.........7060......
.............10010030.50.....100
.......90..100
.
100....
.
..100sampling algorithm progress:
[%]: ..80.....
.......................sampling algorithm progress:
[%]: ...100......40100.......
...90...80100..
..10.60.....60..
60...................sampling algorithm progress:
[%]: .50....Warning: Block unknown_C is not significant enough, removed from profile.
60.100.......10................Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.
.20..Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.......sampling algorithm progress:
[%]: .............10..90...examining piece 14002212..14045293 (43082 bp)
......60.90..........examining piece 22049695..22087481 (37787 bp)
....viterbi algorithm progress:
[%]: ...........20....examining piece 58148442..58192864 (44423 bp)
30..viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ...........70.examining piece 31643331..31697216 (53886 bp)
........20...70....examining piece 58620293..58663381 (43089 bp)
......viterbi algorithm progress:
[%]: .10........70....viterbi algorithm progress:
[%]: .................
.............40..sampling algorithm progress:
[%]: .......10.......30......30...............100...70.......10......80...
..............20....50.......10....sampling algorithm progress:
[%]: .....80........examining piece 25928831..25970042 (41212 bp)
.40..............70.............80......20......40...sampling algorithm progress:
[%]: 90.......10100...viterbi algorithm progress:
[%]: .............1060.......100.....50..........
..2030............................20sampling algorithm progress:
[%]: ..........
10..10....100..........
......50.....2070..60..........90...........10....10...30..........20........9020..40.....................30......70......80.20......20...........60....90...............30........................sampling algorithm progress:
[%]: ..........50........80..........90....40....30...100...............3040....
........40....30.........70...........90............100..........
...60.......1050........30........sampling algorithm progress:
[%]: ...........70............100.........
....examining piece 8548552..8596762 (48211 bp)
..8030.40100.viterbi algorithm progress:
[%]: ......80...40.......50...60..20...
......10.......10.....70.........examining piece 19045083..19094760 (49678 bp)
......viterbi algorithm progress:
[%]: ...50.......20....................40.......70...............2040.....90..50..50.....................sampling algorithm progress:
[%]: .............40.................80..80.10.......30..50............30.........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
.........60.........100......10........
............90...60........6040....................60.........90.......10...........20examining piece 42673945..42735770 (61826 bp)
...100100.....viterbi algorithm progress:
[%]: examining piece 29870270..29913415 (43146 bp)
60.
.......viterbi algorithm progress:
[%]: ....50100...40...50...30...........................70..........70....2030100.......70.....
.........20.60..........Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
..........100......7050.70.......50.........40.............70.......80.......90...................
..........examining piece 335850..373720 (37871 bp)
..80..viterbi algorithm progress:
[%]: 50.................8010..100......8060..60..................80.......80..
.....Warning: Block unknown_D is not significant enough, removed from profile.
.20Warning: Block unknown_P is not significant enough, removed from profile.
.60...90.80..103090.........
...................................90................10070..7020
..............20....sampling algorithm progress:
[%]: ..........100.........
...........
.30......examining piece 36065640..36107512 (41873 bp)
.80examining piece 68923363..68961536 (38174 bp)
....90viterbi algorithm progress:
[%]: ...........60.100............
30.8090......viterbi algorithm progress:
[%]: .20..................9090.10.....................10sampling algorithm progress:
[%]: 40............40..............sampling algorithm progress:
[%]: ..100....
..............90...30.70.............100..examining piece 24676222..24714395 (38174 bp)
.viterbi algorithm progress:
[%]: ......20
...........20......sampling algorithm progress:
[%]: ........50....................100..........10.....examining piece 56473803..56539498 (65696 bp)
.100......
sampling algorithm progress:
[%]: 100.
.30..10.......1030.10.........80.......
..10.examining piece 48107827..48157806 (49980 bp)
.40.......30.60...examining piece 32905837..32955651 (49815 bp)
.viterbi algorithm progress:
[%]: ............viterbi algorithm progress:
[%]: ....20.....70sampling algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: ...100.................2040...10.......90......sampling algorithm progress:
[%]: ...................50......20.30.....40.......
.....40.10.....70.20..........................50...40...10.......10............................10..4030..20......20...........10....................50...30.........40..80...20......20.......examining piece 9628474..9672516 (44043 bp)
....60..viterbi algorithm progress:
[%]: ...................50.30....50.....................sampling algorithm progress:
[%]: .....10...................30......40......30...30..................80.....60..40....40.......70.....90...........10...........60.10.................................40...50.20....................50......20...40.............................70....20........50..30....60..100...50............
.607010..............20.........50.....80.40................5050..........sampling algorithm progress:
[%]: 70....60............60.........80...60.........................................60..............80.....80..10......................20..70...........90....60........30......30.....70..30........9090.20................20....................50......80............70..90....................100.....40..
30............70...100..90...........100....
.....
.60..90.....80.............30.....40.........7040..sampling algorithm progress:
[%]: .........80....100.........100.70..100.......

.......8050....30.............10.......40..
.........90sampling algorithm progress:
[%]: .....40.............60.........Warning: Block unknown_E is not significant enough, removed from profile.
......30......2090..60............30.............10.90..............examining piece 52982506..53027867 (45362 bp)
....viterbi algorithm progress:
[%]: ...70.....30.50...........100.........examining piece 45507764..45551972 (44209 bp)
...
....50.....20.............100......60....40
...80viterbi algorithm progress:
[%]: .40.....100...............
...........30..10.50..sampling algorithm progress:
[%]: ........examining piece 52883219..52924373 (41155 bp)
...viterbi algorithm progress:
[%]: ...50..90.......80...........................40.100.....examining piece 13001608...13042305 (40698 bp)
....viterbi algorithm progress:
[%]: ........80.......7060...100.........
..........50.....
60..10...50.......10.....50.........10...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.70....10.........20..............70...........60........................80.20....20.........Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
............examining piece 48742386..48784036 (41651 bp)
..viterbi algorithm progress:
[%]: ..60......20........70.......examining piece 33053447..33092445 (38999 bp)
.....viterbi algorithm progress:
[%]: ........90......sampling algorithm progress:
[%]: ........60.......examining piece 9647167..9689744 (42578 bp)
.30......20.....80.....30..viterbi algorithm progress:
[%]: .....90......6080....30.90100........
................10...............7010.30..10........40.........90............80........40...............60................................10100....20..
..........50...........3020....40.70...20....9050........Warning: Block unknown_B is not significant enough, removed from profile.
70Warning: Block unknown_G is not significant enough, removed from profile.
..50...........40.......30....20............70..........60.......................100.......50Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
........examining piece 12356979..12405936 (48958 bp)
....viterbi algorithm progress:
[%]: 
.....40...30................40...30..........20......80..70examining piece 34813162..34868885 (55724 bp)
...................40..80...50...viterbi algorithm progress:
[%]: ...60.....70.......80........50...........60........40Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
...............9060.....80.............100..........40..10.......70.........examining piece 9820713..9858622 (37910 bp)
.......viterbi algorithm progress:
[%]: .........
....70......90.50..100..80..70............90..........50.........60...50......80.80
.....................90..................50.....sampling algorithm progress:
[%]: ...60......100.80.90...........
......100..........80
90.........................sampling algorithm progress:
[%]: ...10060.....
........sampling algorithm progress:
[%]: ...100.....9020...........10......90....100
...10.....
..40....90100............60.Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
.60....
...........1010..20..60...........................sampling algorithm progress:
[%]: ..examining piece 27729156..27767912 (38757 bp)
.20.70....................Warning: Block unknown_F is not significant enough, removed from profile.
..30..70100.....viterbi algorithm progress:
[%]: ....20......
.20..........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
......................40........sampling algorithm progress:
[%]: ..........examining piece 33048121..33089517 (41397 bp)
..viterbi algorithm progress:
[%]: ...10.30......70examining piece 14002221..14040085 (37865 bp)
.......30...................50...viterbi algorithm progress:
[%]: ..30examining piece 4056838..4094690 (37853 bp)
......70.80.........viterbi algorithm progress:
[%]: .............1010..........................60.30....100......40....................40..20....70..10020.........
...........7040....20..........................10.50.......
............10...30.......80..80................50..90..........30.........30.....50....60.sampling algorithm progress:
[%]: 90..80......40.....90.....................................20............................100.50...
10.....20.sampling algorithm progress:
[%]: 40.6070........30..40...............................................60...6020................100.......70...80...
..10....30...50..Warning: Block unknown_F is not significant enough, removed from profile.
.90..40.........5070.....7030......................................90.90.examining piece 5378795..5416596 (37802 bp)
...90.......108020...sampling algorithm progress:
[%]: .40........30..8040..viterbi algorithm progress:
[%]: .................30......................60....80.60...70...100..10..40......
......50..90........30.............................................20..............70100......60...
...............Warning: Block unknown_S is not significant enough, removed from profile.
...70......9040.....70...30............examining piece 6603461..6662816 (59356 bp)
....50.viterbi algorithm progress:
[%]: .....4070.......................80.......40...100........50..................100..
80..100.80....100..50..
...........90....80............
.....
.......60.......6090.........examining piece 44439430..44477342 (37913 bp)
...........60........90....sampling algorithm progress:
[%]: ....50viterbi algorithm progress:
[%]: ...501070...100....
.........70..........90......90....sampling algorithm progress:
[%]: ....Warning: Block unknown_A is not significant enough, removed from profile.
...80........10............80....100............
...........80..90.............10sampling algorithm progress:
[%]: ..20.........examining piece 45940938..45982219 (41282 bp)
......viterbi algorithm progress:
[%]: ..........70......100......
.................Warning: Block unknown_I is not significant enough, removed from profile.
.100.....90...2030...........
...100.60.10...10............
................40....100..30sampling algorithm progress:
[%]: 
..examining piece 68886614..68932885 (46272 bp)
.....viterbi algorithm progress:
[%]: .......examining piece 12944638..12982445 (37808 bp)
..viterbi algorithm progress:
[%]: .......20.40................20.....examining piece 45242465..45280290 (37826 bp)
10050.....viterbi algorithm progress:
[%]: ..20..8020..10..sampling algorithm progress:
[%]: .......40....................
................10.10.....60.....70.......20..1010........50..30......30.....80...............................70...10.......30.........20..........10....60.......................sampling algorithm progress:
[%]: ......8040.20.40.40...20........examining piece 13217869..13255676 (37808 bp)
.....viterbi algorithm progress:
[%]: .30.......................................7060..........50...90.......................50....40...10............80...................20........6080.50..100.....
.....30..40......3010.50..........30.............................60.70.......20....90...................60................20...............80.............60...100....Warning: Block unknown_B is not significant enough, removed from profile.
..20....
...7070.......30...4010...30.......90....50..........................examining piece 10629411..10667950 (38540 bp)
....viterbi algorithm progress:
[%]: ..80...............100....90
....40...80.80.........40.......10030....90..........70...............10........................100..40...
....90..50.Warning: Block unknown_B is not significant enough, removed from profile.
50......Warning: Block unknown_F is not significant enough, removed from profile.
..........................50.........40...examining piece 21864294..21904234 (39941 bp)
..viterbi algorithm progress:
[%]: 20...........100.....30
....60....30..examining piece 56356616..56395092 (38477 bp)
..40....viterbi algorithm progress:
[%]: ..60............80.........Warning: Block unknown_K is not significant enough, removed from profile.
.....10.............50........70.30
..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.........905060........100....examining piece 37465408..37503287 (37880 bp)
sampling algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ............examining piece 12703630..12741506 (37877 bp)
....60..
20......viterbi algorithm progress:
[%]: ........80.......70........70...........1040.............20..................90...............sampling algorithm progress:
[%]: ......1090...30...........60....60......20........70......................90..............5010010...50.
..................40....20.............80.......30.100............20.....70.....
.....................80..........70...60.305050Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.30...40..70..........sampling algorithm progress:
[%]: .....................100................40...80..........
.examining piece 62592279..62631732 (39454 bp)
.10......1040.......................viterbi algorithm progress:
[%]: ..50.40...........60..................40.20.50.............80..50..60.90..................70...sampling algorithm progress:
[%]: .3020......90........80..........70..5080....90.................80......60....40............10.....50.........70............80..........30.50..............................60.70.....6010..................90.60....................................................50............4080...70......80...10080........
......90...90........100..100.......80.sampling algorithm progress:
[%]: .70.....2030......
60...............
.......90..70........50......90........................................6090sampling algorithm progress:
[%]: .6070....90100......
10..100.......80
.......90sampling algorithm progress:
[%]: ....30.....................50............10.............Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
80..60..........20..................100..examining piece 13548644..13590755 (42112 bp)
..90.viterbi algorithm progress:
[%]: .........20.90.....90.....100....10
.....100.40..90...80...........
............30.30...........examining piece 1..39187 (39187 bp)
...10.........viterbi algorithm progress:
[%]: ...........70........40.....100....sampling algorithm progress:
[%]: ...70.......
....sampling algorithm progress:
[%]: ......40............20...........50..10..100..40..............10..
..50....10...
...100....20...50..............................10..sampling algorithm progress:
[%]: .20.......20..........
....100......sampling algorithm progress:
[%]: .........50......90.Warning: Block unknown_I is not significant enough, removed from profile.
60............30.60......30......
.............30.30.....60......20................80...............40..examining piece 4859820..4915234 (55415 bp)
70....viterbi algorithm progress:
[%]: .........10......10..40...........60..........70...................50........30....sampling algorithm progress:
[%]: ......sampling algorithm progress:
[%]: ........80....8040.......................50..................40.60..........207010..................20..........40.10...10..70.80..........90................70......................60..............100.....................50......50.20.....
....30....8020100.......90...
................................308050.........70..80.........9030....20.............60.9030......................................40...100........
.......sampling algorithm progress:
[%]: .60........40...................10080.....90..40...7090.......40...............examining piece 40903381..40942004 (38624 bp)
.........10...50...........
50..100..90..........70....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
.Warning: Block unknown_Z is not significant enough, removed from profile.
..Warning: Block unknown_AF is not significant enough, removed from profile.
.
..50....viterbi algorithm progress:
[%]: .30......60..100.20.....20.......80..100....60........
..70.....
..sampling algorithm progress:
[%]: examining piece 33132309..33217362 (85054 bp)
.........50............90...3060...60........................70...viterbi algorithm progress:
[%]: ........90....100.................40..
..........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.....sampling algorithm progress:
[%]: .....70........10..............80.....70.....5080..10.10060......examining piece 3692518..3730367 (37850 bp)
...
.......40...........sampling algorithm progress:
[%]: ..........10...80....viterbi algorithm progress:
[%]: ....90.60.....100...............20.......70.............
.....examining piece 5036661..5075182 (38522 bp)
.80...........20.70.90...20100.......
.....70...90viterbi algorithm progress:
[%]: ..................................80..30..100..30..
......10.......90........................90sampling algorithm progress:
[%]: .............Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
......40....100.....80.50.
..40.....100.100.90..
.........100.......100
examining piece 3024091..3063892 (39802 bp)
..viterbi algorithm progress:
[%]: ..50..80....examining piece 44759300..44812004 (52705 bp)
.20.viterbi algorithm progress:
[%]: .............100.............10.50..........100...10...8060.......90..Warning: Block unknown_F is not significant enough, removed from profile.
............Warning: Block unknown_B is not significant enough, removed from profile.
........................60.10..7030
20.60...............examining piece 35701340..35749396 (48057 bp)
....viterbi algorithm progress:
[%]: ..........examining piece 26160799..26202502 (41704 bp)
........sampling algorithm progress:
[%]: .examining piece 34475254..34513058 (37805 bp)
100examining piece 52781792..52819617 (37826 bp)
...20......
.....60..viterbi algorithm progress:
[%]: ...80........viterbi algorithm progress:
[%]: ..........viterbi algorithm progress:
[%]: ..60.......70.....30....90.......10.2010.40.1030........2090.....
.........
...............................
.............80.100.sampling algorithm progress:
[%]: 20.....
.40..40..........................20..50...............sampling algorithm progress:
[%]: .....sampling algorithm progress:
[%]: ...............30.30..........5090......examining piece 37067018..37110426 (43409 bp)
..10.viterbi algorithm progress:
[%]: ...30...50..................................................10.............40....10...30..........60100...100...10....60..
.....1070...........70...60.............examining piece 16263155..16301525 (38371 bp)
20.
....50....10..viterbi algorithm progress:
[%]: .40...........30.....40.........20...................20............20......70.......70.60......30.10.70.40.......20............Warning: Block unknown_E is not significant enough, removed from profile.
...sampling algorithm progress:
[%]: .........90.............10....30............................70....20............30..........50........10..examining piece 3306643..3353963 (47321 bp)
..3080.......80...viterbi algorithm progress:
[%]: ........50.....80.................40.3030.........80..10............40...20.........80..............5040.....................................90..90..50...40..90...30.....40..........................90.....................60.......40..40........................50...40.100...........
.100....6050..
..............................60.............505050......80..60.100.............
....................50100...7060...........60................70.........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
....50..6070............
....20.60.....702060........80........90.........examining piece 19760184..19804307 (44124 bp)
....viterbi algorithm progress:
[%]: ...sampling algorithm progress:
[%]: 60....20.examining piece 15596961..15657009 (60049 bp)
........80........80.........70.............viterbi algorithm progress:
[%]: .......................90....10.........10.examining piece 2941948..2983611 (41664 bp)
...90....viterbi algorithm progress:
[%]: ...70...70.......70.10.............70.....80..........7020.......100........
100..........
........20..................20...30..................20....100...........10.80..80.80.............40.....80.60.............30.20........................50....
...80....100...30..........examining piece 39298406..39339657 (41252 bp)
..........30...viterbi algorithm progress:
[%]: ..........809060.
......2040......9090.......................90.............70........examining piece 61041497..61079688 (38192 bp)
....viterbi algorithm progress:
[%]: ....10......40......................90....1090..................10080..........1010..100
...50......sampling algorithm progress:
[%]: ..
....20................20....9030..........90sampling algorithm progress:
[%]: ...20...................90....100.................
.30........100.3010
..........................30....30.60...................50......40.sampling algorithm progress:
[%]: 40........20...10...30....40.....Warning: Block unknown_C is not significant enough, removed from profile.
....100.........100...Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
..................100examining piece 25563849..25605591 (41743 bp)
..viterbi algorithm progress:
[%]: ....30...100
....50......
.....50..70..30...examining piece 20686438..20727702 (41265 bp)
.
1005070viterbi algorithm progress:
[%]: ..10..........sampling algorithm progress:
[%]: ..............20...
.100.examining piece 53837687..53887436 (49750 bp)
...10................viterbi algorithm progress:
[%]: 
...............60................60..40..sampling algorithm progress:
[%]: .60........10.........10......sampling algorithm progress:
[%]: ....20........20.......sampling algorithm progress:
[%]: ...........................8070.sampling algorithm progress:
[%]: ......30.60....................5010.20
70................70...........................10...............10....30..........sampling algorithm progress:
[%]: 10...................30.......80....30.......20.20.......60.................80.10.80........20.........40.......20................................40...........40.......90...................30.......90.....70..40.......90........30......30..40...................20....70..50.......20...10.50........80..30.............50......4030...............80.........40.40.......50100.........100....
.....60....
...................100..40...........30..50.......sampling algorithm progress:
[%]: ....
......50.....50.....sampling algorithm progress:
[%]: .90....60.......60..............20.70............................60..........8010........sampling algorithm progress:
[%]: ....6010.40..30.....60................60......100..........40.
.........80...40.20.................................90......20...........70..70....70..1070........30.70......7030.......30............90........................................3050............40...................80...............8020...........80.......100..........
....50......40......80..40..80....80..........................40.90.........Warning: Block unknown_B is not significant enough, removed from profile.
..Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
Warning: Block unknown_Z is not significant enough, removed from profile.
Warning: Block unknown_AA is not significant enough, removed from profile.
Warning: Block unknown_AC is not significant enough, removed from profile.
.60.......40.60.90.......903090..........50.90..50...........................50..................100..70.......
....................90..100..100...90.
.
...60.4040......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
90Warning: Block unknown_F is not significant enough, removed from profile.
...80.70examining piece 44728967..44781956 (52990 bp)
.....viterbi algorithm progress:
[%]: .........................50..............60..............9070..........................100.....5040....
.5050....50...examining piece 60227492..60265290 (37799 bp)
...viterbi algorithm progress:
[%]: .......100...100.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
...
50....80
...............80...Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
..............60100..............10..
............6060.........examining piece 43094930..43132839 (37910 bp)
....10......70....90.examining piece 2669304..2730820 (61517 bp)
60.70...viterbi algorithm progress:
[%]: 60.60.Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
Warning: Block unknown_AB is not significant enough, removed from profile.
.Warning: Block unknown_AJ is not significant enough, removed from profile.
Warning: Block unknown_AN is not significant enough, removed from profile.
..........viterbi algorithm progress:
[%]: 90..sampling algorithm progress:
[%]: ...........20...........................examining piece 1335953..1419715 (83763 bp)
..examining piece 30369684..30408486 (38803 bp)
..70.viterbi algorithm progress:
[%]: .100........
.....viterbi algorithm progress:
[%]: .80................100....10...........examining piece 7605068..7651006 (45939 bp)
.30...viterbi algorithm progress:
[%]: .......examining piece 34386777..34424548 (37772 bp)
..70............100...70.....10....
...70...viterbi algorithm progress:
[%]: ...
....80......80....90.....20....10..........20...40..............60...20......10............40.....................30....90..............examining piece 30254207..30292035 (37829 bp)
....sampling algorithm progress:
[%]: ...............100.80.....viterbi algorithm progress:
[%]: 30.
.50....Warning: Block unknown_E is not significant enough, removed from profile.
...20.10......80....10090.40........sampling algorithm progress:
[%]: ..10....100.....
50......
............................20.10.......20...40..........sampling algorithm progress:
[%]: 50.examining piece 46482490..46547530 (65041 bp)
.....viterbi algorithm progress:
[%]: 20..10..........20...70.....................60...........................90.......30......60...3050..20.......100...................10....1010..............Warning: Block unknown_B is not significant enough, removed from profile.
..100..........30...............
30405030....70.......70.............................60..70
.................90.......10.examining piece 28838297..28882860 (44564 bp)
.50100...20......40.viterbi algorithm progress:
[%]: ......
.sampling algorithm progress:
[%]: ..80.......40..............40..................20...........60........80....5070......................90...60....................30....................70...10...........50....60..............40.....100.......
.100...50......80....sampling algorithm progress:
[%]: ......80..
.....90.3030..........40........70.........70.80....20Warning: Block unknown_E is not significant enough, removed from profile.
............90....................80..sampling algorithm progress:
[%]: .........60.90........20....50...................100..80..
.....20.....8030....Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..100....40.....2080.....
..examining piece 52269457..52323255 (53799 bp)
....viterbi algorithm progress:
[%]: ..........50..60....100....10.10.....
...............sampling algorithm progress:
[%]: ....40..examining piece 20033782..20083904 (50123 bp)
.....................70viterbi algorithm progress:
[%]: ....sampling algorithm progress:
[%]: .........10............50.70..........10................90...........10................50..........20..............20.Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
...................20.80.........20..................10....30..30.90.......60.........60..30.........20..........................90..3040........examining piece 57369006..57422081 (53076 bp)
......40..100.........viterbi algorithm progress:
[%]: ......60..90.......
..........40....50......70.50.............100......
.70.20................30.sampling algorithm progress:
[%]: 60.........60.......30.....40..........................803030....80.70........70.............10.......................................8080....80..10.....60......5030..........7010...90........90......90.......90....90..6040....40.........100...............................examining piece 26837063..26874972 (37910 bp)
.....100.....100
....
...20.40..2010090..
.
.viterbi algorithm progress:
[%]: .60.....................20.............100........40...Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_V is not significant enough, removed from profile.
Warning: Block unknown_Z is not significant enough, removed from profile.
...50.....................100.....30....
.70.....examining piece 31790740..31828934 (38195 bp)
..viterbi algorithm progress:
[%]: ...examining piece 33839055..33876841 (37787 bp)
..10..sampling algorithm progress:
[%]: viterbi algorithm progress:
[%]: .80..........30............30......................
...............20.....1050...sampling algorithm progress:
[%]: ....10..........10...80...Warning: Block unknown_G is not significant enough, removed from profile.
...70..examining piece 40065423..40106576 (41154 bp)
.....30viterbi algorithm progress:
[%]: .4060............40....50................50.......20..2030...............40.examining piece 14771101..14828947 (57847 bp)
.........10........................viterbi algorithm progress:
[%]: .10......................90...30.30....40.90...........40...90...........80.....................2020......50........20...90.......705040...40..40.............50...........50........100.....60........
......60.......10.......50...30.....3050............................................................90.60.60.................60.40.....40..........80..........30....6020........70..50............60..........examining piece 23893489..23968164 (74676 bp)
................50..70.....viterbi algorithm progress:
[%]: ....50.70.......80.....................100..........70............70......
70..........90.6090..80.......30......60.............50...................80......10040..100.
..................70
70..sampling algorithm progress:
[%]: ...........90.....................60...70..100....10.........100.
.....10sampling algorithm progress:
[%]: .....80.90......80.....................60.............20............Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.60.....8090.50........70......100......
5030....10.10080
..........examining piece 130838..169569 (38732 bp)
..viterbi algorithm progress:
[%]: .....100.......
..examining piece 65044925..65082816 (37892 bp)
..viterbi algorithm progress:
[%]: ........sampling algorithm progress:
[%]: ..
...40.....................90......10........sampling algorithm progress:
[%]: .10......................50.............90..10......20....10.............20...................examining piece 59067865..59121827 (53963 bp)
..60.viterbi algorithm progress:
[%]: ...........20.......10020...Warning: Block unknown_I is not significant enough, removed from profile.
40.............20.....
.............9030..60....70......30........70.........30...sampling algorithm progress:
[%]: ...30.............40...30.......examining piece 71541428..71583490 (42063 bp)
....80..........10......100..............viterbi algorithm progress:
[%]: ..40..50...10.........................80..40......90......40......60.............20.......40.....100.....................50.70100
.70....
..50...70....803050..........70..............80.....................40..................
..sampling algorithm progress:
[%]: ...905060....100..........6050.........20sampling algorithm progress:
[%]: .60.......
....100..100....80Warning: Block unknown_B is not significant enough, removed from profile.

................40.....60..10.........70.................................70..examining piece 31903105..31959177 (56073 bp)
..........60..20.sampling algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .........10.70..70..Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_F is not significant enough, removed from profile.
.80.......80.............80...............................3010......90.90...examining piece 52521041..52558914 (37874 bp)
viterbi algorithm progress:
[%]: ...........
.........90..30.............................100.......
2070.10..402010........................80.......100sampling algorithm progress:
[%]: .....
.............60.........80.50...........30..................20.....................30..70..20.....6010Warning: Block unknown_J is not significant enough, removed from profile.
80.....90...40..........................Warning: Block unknown_A is not significant enough, removed from profile.
90............8030.examining piece 3228476..3271693 (43218 bp)
......90.....70....40...50...............viterbi algorithm progress:
[%]: .....20.......................40...50.....40......examining piece 86467496..86506651 (39156 bp)
9030.80.viterbi algorithm progress:
[%]: ...100...60...........
...................50................30.....100.......100..80..90.
.....10...7050...sampling algorithm progress:
[%]: ..............50........................100.............90.
...100......
10....10.sampling algorithm progress:
[%]: .80.
.40.60........40.................sampling algorithm progress:
[%]: .....10.....20.....20...10......90...............60...........60.50.90.......100.......20...50..30........................................Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.....3070......
..10...10040....30.....
......................Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
...40............80.60..5020.........70examining piece 41633286..41679580 (46295 bp)
......70........viterbi algorithm progress:
[%]: 5020................................60..40......20.......60..sampling algorithm progress:
[%]: .............80examining piece 2566219..2604068 (37850 bp)
........viterbi algorithm progress:
[%]: .100..........70..........70................5070...100........
.......90.........80.....10..
..10........80....80....80......10.....30....50..........sampling algorithm progress:
[%]: ........................8060..90..20.90.sampling algorithm progress:
[%]: .........30..........................................examining piece 55272274..55319033 (46760. bp)
90.....100.viterbi algorithm progress:
[%]: ..
...20.60..100....
...9020..30.30..................90.......40...........90.....10......10..............40..........10...........................Warning: Block unknown_G is not significant enough, removed from profile.
.........30..................30....50......100.50..100..60..70
100...20....
examining piece 13387033..13424873 (37841 bp)
..
..40.20..70......viterbi algorithm progress:
[%]: ......20..100............60........
...............40...examining piece 66877090..66918079 (40990 bp)
..viterbi algorithm progress:
[%]: .......sampling algorithm progress:
[%]: ...............60....30......70....40.10.Warning: Block unknown_H is not significant enough, removed from profile.
...........30sampling algorithm progress:
[%]: .......10....................30.............90..Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
.......7080...........examining piece 31393736..31468564 (74829 bp)
...102050............50.............40....70.................viterbi algorithm progress:
[%]: ..30......90.50..40....40.........examining piece 68297458..68337777 (40320 bp)
......100....10.60........40..20...viterbi algorithm progress:
[%]: 40.......5070.....100....80.
20..50................80..........50....80...........................50......60........20.6030.............................20........60.............7050........................30.......90............80.40......60.............10....10090...................60..70..90...........90...30...................70.100......100.
50
...
.........60.......70..40....examining piece 81910164..81969135 (58972 bp)
.viterbi algorithm progress:
[%]: ......80..80....................10......................40.....60......100.................Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
.Warning: Block unknown_X is not significant enough, removed from profile.
..8020....80..90.
....
...............70.....Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
...6070...100.....10..2050examining piece 43070430..43118394 (47965 bp)
sampling algorithm progress:
[%]: 70.viterbi algorithm progress:
[%]: .50...
.............100.sampling algorithm progress:
[%]: sampling algorithm progress:
[%]: ...
......90.......................................examining piece 1860221..1908221 (48001 bp)
10......................viterbi algorithm progress:
[%]: ......sampling algorithm progress:
[%]: .....80.80.....60.1020..100.....10...
............................10090...Warning: Block unknown_F is not significant enough, removed from profile.
60....30..........20.................80.90...10....10.
20.40....examining piece 6243391..6282212 (38822 bp)
..viterbi algorithm progress:
[%]: ......70.60.......10......................50..90...................10.....examining piece 31501463..31541415 (39953 bp)
......viterbi algorithm progress:
[%]: ......20..............3060..20...............................10...80.........20......7020...............20........70............30..2090......40..80........30...........100......30...........
.............90..30..90.........sampling algorithm progress:
[%]: .........................50.......30...30100..40...100.
...sampling algorithm progress:
[%]: ..4040..........
................30.................100.........
.90..10.......50.1060.....30..100...........30...50.......
...50......sampling algorithm progress:
[%]: ..20............40.....................60.......40....80.20.10....70examining piece 16406937..16448821 (41885 bp)
.Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_C is not significant enough, removed from profile.
30..viterbi algorithm progress:
[%]: ......................60..........60..........40..20................70........10.4070...........examining piece 54182129..54225730 (43602 bp)
.................sampling algorithm progress:
[%]: .3030.........viterbi algorithm progress:
[%]: ..............80.............50....20.................70...40...................70...........80.......10..........60.....3050....50............40..........................90.......5090...............60.....40.....70....40......2010...80..90...................80....................70.......5040............50........80..30......100..........5050....
..........3080..100.........................100....
......
..609090..90.............90.......6020.................sampling algorithm progress:
[%]: ...40sampling algorithm progress:
[%]: ....50.60............100..........100
....
70........................10...............100.....100...90...100.50.100.
.10......examining piece 45732766..45774829 (42064 bp)

.60..70viterbi algorithm progress:
[%]: .80....20.Warning: Block unknown_D is not significant enough, removed from profile.
...
....80.............30.............
....60.....examining piece 13510094..13552904 (42811 bp)
.viterbi algorithm progress:
[%]: .10.sampling algorithm progress:
[%]: ....30...60......20Warning: Block unknown_N is not significant enough, removed from profile.
...............................................80..9040....1070................20.......sampling algorithm progress:
[%]: ..10.Warning: Block .unknown_G is not significant enough, removed from profile.
....examining piece 49227485..49282266 (54782 bp)
.......70..30.........5050....................20.............40..viterbi algorithm progress:
[%]: .....................60.10...70100..30...sampling algorithm progress:
[%]: .
...60...90...examining piece 45661402..45699671 (38270 bp)
.........8030.20.....40................viterbi algorithm progress:
[%]: .........sampling algorithm progress:
[%]: ..................70..20......................60......40..............40................50.....10.1009080......7080.........
........10.....30.30.50.............50...80.....................70..20...90..........50............60.100.....60.
............40......................100...
.30..............................70..20.........Warning: Block unknown_G is not significant enough, removed from profile.
..706050....40.....40.................................80..70...Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.....90.............50.....examining piece 44721850..44769315 (47466 bp)
...60.90viterbi algorithm progress:
[%]: .......8070...................90.7030...examining piece 6817580..6855792 (38213 bp)
.60..viterbi algorithm progress:
[%]: ............60...................50..70......Warning: Block unknown_G is not significant enough, removed from profile.
..............10080....
.....90.60...................70................1080.......80....80....10.........40.......100.....100.80....
..examining piece 78514238..78552558 (38321 bp)
.....viterbi algorithm progress:
[%]: ...
.................100.Warning: Block unknown_A is not significant enough, removed from profile.
90Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_Z is not significant enough, removed from profile.
....60.................90........
......10.......9070..20..10...50.100.examining piece 42229689..42287557 (57869 bp)
...
......viterbi algorithm progress:
[%]: ...90.100..
....90..70.........20sampling algorithm progress:
[%]: ................examining piece 36958599..37008109 (49511 bp)
....viterbi algorithm progress:
[%]: ....70.......20100.....examining piece 43874440..43914824 (40385 bp)
.viterbi algorithm progress:
[%]: .....
...........60.........30..................sampling algorithm progress:
[%]: .80.........10............30........10..10.............examining piece 41034497..41072340 (37844 bp)
....viterbi algorithm progress:
[%]: ..examining piece 26816478..26854792 (38315 bp)
.30.10.....80...viterbi algorithm progress:
[%]: .........70...10.............100............40.....10....20........20.....60......40...
....40.20..................10...........20.30..20.............100......80.......................................9050sampling algorithm progress:
[%]: 20.40.
30..30............................80...................40.......50.........50....4030.90.40...........30.........30...........20.....sampling algorithm progress:
[%]: ..60........100..7040....10......60........50.............................10070........100......40.
.
..........40..........10........80.....9080.50...........60..........20........40.......sampling algorithm progress:
[%]: .....70
.....50..90.........60............5020......................70...10.....100....
....60..50Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
...........................30..20......20.........30........80.....80..................examining piece 33083335..33121184 (37850 bp)
...60......30....50.....70......................viterbi algorithm progress:
[%]: ................40.90....4040.7060........................70.examining piece 26853591..26894496 (40906 bp)
.....viterbi algorithm progress:
[%]: .80..............70.50.........90......6080.........50.......100.............
...50..103060.....................................sampling algorithm progress:
[%]: ..sampling algorithm progress:
[%]: ................100...70.....60......902080.........30.......10.......60..70...............
...60....80.............20....100..........................
..70.......100....90.30..
..........30............10...80.....40.50......80.70...7040..100......
.sampling algorithm progress:
[%]: ......................90.80........40......50..................sampling algorithm progress:
[%]: .....10..........80Warning: Block unknown_M is not significant enough, removed from profile.
.......50..........60.................50.......20......20..80.....90............70..examining piece 26977915..27022484 (44570 bp)
...viterbi algorithm progress:
[%]: ...................10......30.............60....60.............80...............70..............100examining piece 30620163..30662593 (42431 bp)
40..........
.........9010.10..90.70..40.....90...viterbi algorithm progress:
[%]: .......6050...30.......80....100.....
..........10...80..........60......80..90..............................100...20.....
70.................70...................9040.examining piece 5040299..5084482 (44184 bp)
8020..viterbi algorithm progress:
[%]: ...80................10................................90...........100..10...80........100.examining piece 24899588..24939882 (40295 bp)
..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
viterbi algorithm progress:
[%]: .70...
.......100..
..
...100..20...........30.20.50....80..sampling algorithm progress:
[%]: .......
.........examining piece 27057564..27095416 (37853 bp)
...viterbi algorithm progress:
[%]: ..10.................90...30...........30...10......90.sampling algorithm progress:
[%]: Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.30...............20.....100......10...90......................20examining piece 8829910..8885808 (55899 bp)
.20..viterbi algorithm progress:
[%]: .60.......104080.........40.........
..............50............90.....20.30..40........90......20............90......30....50sampling algorithm progress:
[%]: .....40..................40......................30......1030...........70...90.....................sampling algorithm progress:
[%]: ....40.....50...............9050.........60.40...10...50...........................10..........60.......20......................50........50....40.........50.100......20........70..100......7080..........20..................60.
.......20........
..30.............90........50.80.......100....100...................70.....40....
...........30
........9060....60.....sampling algorithm progress:
[%]: ..30......90.30.5050...60.........80...sampling algorithm progress:
[%]: ........80........100......
.......60..............60.........sampling algorithm progress:
[%]: .40...............90......sampling algorithm progress:
[%]: ......30.......10.............70.........10..................100..70.........100...
....
..90...60.50....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
...801010........70........70...................100.....70..........20...90..20......examining piece 259282..297269 (37988 bp)
.....viterbi algorithm progress:
[%]: .........
....20................80.60......10020100.......
..........
...................sampling algorithm progress:
[%]: 1001060..30............40....30........sampling algorithm progress:
[%]: 30..................80......examining piece 30057791..30095805 (38015 bp)
.....70..3040.......80100...viterbi algorithm progress:
[%]: ......20...10..
..90...........
10.4040...................................80...........................40examining piece 71261313..71299099 (37787 bp)
.....viterbi algorithm progress:
[%]: ......8020..40.20sampling algorithm progress:
[%]: 30..50..examining piece 25048580..25086360 (37781 bp)
......viterbi algorithm progress:
[%]: ..................50....40......90.............................................10....100...........30.........30...60...40
..90.50.10....50..90..........................10......60.....................40......................20........7040...sampling algorithm progress:
[%]: ............50..50.............20.....100.......50..60.
..........60..100.....sampling algorithm progress:
[%]: ..70...90........
...20.10.......50.........80.50...........100..........60..100.......................
...30....6030.10...20...........70..........80....sampling algorithm progress:
[%]: .....90.....7060.70.....................30.........
............30............10..............10.........40............80...100........70
80...........90..70.........40...70.........20..................80............90examining piece 9819374..9872571 (53198 bp)
40.....viterbi algorithm progress:
[%]: .........20..................5040...30..........100...80....50....
90.................100....100
......................examining piece 89585607..89643857 (58251 bp)
.50..60.40viterbi algorithm progress:
[%]: sampling algorithm progress:
[%]: .....
....80.....50.............90..30........90....60...........50.100....70........
......50....10...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
..Warning: Block unknown_L is not significant enough, removed from profile.
...........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.................6060.100......
.80...6060....Warning: Block unknown_D is not significant enough, removed from profile.
...sampling algorithm progress:
[%]: ..40100......90.......
examining piece 24548122..24595560 (47439 bp)
....viterbi algorithm progress:
[%]: ....60..........70.................examining piece 18648860..18686634 (37775 bp)
.90.....examining piece 50893688..50938227 (44540 bp)
........viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: ......10......1060...............examining piece 36621068..36662141 (41074 bp)
....viterbi algorithm progress:
[%]: ..80.....60......50..70...........100........
................................1020...20..90.90.Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.........10..10....70..................100.................70....
...30..100...10.
.60.....30........80...examining piece 33178162..33220113 (41952 bp)
..........20....70......20............20............40.viterbi algorithm progress:
[%]: .sampling algorithm progress:
[%]: ...Warning: Block unknown_A is not significant enough, removed from profile.
..80.....40..................20...................examining piece 40812475..40855098 (42624 bp)
......70........7050...80.10.3090...............7050.........viterbi algorithm progress:
[%]: ..............30.........examining piece 62858619..62903857 (45239 bp)
.....viterbi algorithm progress:
[%]: .......90.20.....60.........80...20......20...........60........80.......40........examining piece 16229787..16298537 (68751 bp)
80100.............
.......viterbi algorithm progress:
[%]: ...70.......30..............10.......70..........1040.100.....30...90.....
...........40.30........90.80..............Warning: Block unknown_I is not significant enough, removed from profile.
........sampling algorithm progress:
[%]: ...80......50.........50.......70...90..............examining piece 12348217..12389549 (41333 bp)
........20.90................viterbi algorithm progress:
[%]: ....100...90...30...60
......50.......................................90...100.....100.60
..30
10..7080........40...............sampling algorithm progress:
[%]: 30..80.............10.100............
.80100......................
......Warning: Block unknown_M is not significant enough, removed from profile.
.60...........70...Warning: Block unknown_G is not significant enough, removed from profile.
...10.....90...........40...20.20...sampling algorithm progress:
[%]: ............40.examining piece 26541240..26579191 (37952 bp)
examining piece 13558686..13602722 (44037 bp)
...sampling algorithm progress:
[%]: ..........100.viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: .10....
...40.........20.........10..10......................80..10....10...............70.........30...............20...50...10........30.2030..........Warning: Block unknown_H is not significant enough, removed from profile.
...............................30..........40....50.......30......20......90examining piece 42383390..42439667 (56278 bp)
.........40....viterbi algorithm progress:
[%]: ........5040..20...........40.....4080...............90.............40..50...............50..30..50............10..............100...............60.........90100...60...60.............
70...50.2060........40......70............5070.....60............sampling algorithm progress:
[%]: .............90........50..80...............7080............50.................10.............90....10......90........60.....................802060.....60..100.....
...100.70...
.......................30....20.............90.........20.........40..............
.8070.70....50.........100..
.50..................examining piece 36457258..36496053 (38796 bp)
...........100....sampling algorithm progress:
[%]: viterbi algorithm progress:
[%]: 6060.80.......
.......................70examining piece 69435151..69479940 (44790 bp)
.80...100.viterbi algorithm progress:
[%]: .70.30..30................80..
...70.10......80......................60examining piece 32256844..32294681 (37838 bp)
.viterbi algorithm progress:
[%]: ....90...10..........90.sampling algorithm progress:
[%]: ............................100....90.
.....10.........20..20...........................10..sampling algorithm progress:
[%]: ..........10020..........
......30..........30..............20....3020.............30......40.90.......80....80..100...80Warning: Block unknown_C is not significant enough, removed from profile.
30...................60.
30.examining piece 56669334..56749851 (80518 bp)
.....30..40...examining piece 36767210..36853645 (86436 bp)
...40.....viterbi algorithm progress:
[%]: .......viterbi algorithm progress:
[%]: 10.........................40..............sampling algorithm progress:
[%]: 50.....70.......40...........50.................40.....50...10......100..10..........................................60..20............90...506070........6050....20...10.......10....40....30.80.................................90......70........100.40......70.............40
..
..70..........60......50......sampling algorithm progress:
[%]: .....90...80.............................sampling algorithm progress:
[%]: ............8060..9030.......................80..........90....40...10..........70........................100..10.............
........70...2070..100..10080....
.5090..............
......90...sampling algorithm progress:
[%]: ....................30.90...............50................60..40.........100.20.....
10.....40..............10060...........
...100...100....sampling algorithm progress:
[%]: ....80
.50..........50..80....20......70.......examining piece 53371627..53425086 (53460 bp)
...................Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..20..viterbi algorithm progress:
[%]: .
..sampling algorithm progress:
[%]: .70.....10.30..60.....................3060...................1050...examining piece 23988601..24027433 (38833 bp)
......viterbi algorithm progress:
[%]: ...................70..80...20....50................8020................40..........10examining piece 9776303..9814200 (37898 bp)
..viterbi algorithm progress:
[%]: ......70.................80.30........90..4030..................sampling algorithm progress:
[%]: ..................90.........9010.50...40......20.......................90.............................4050.....80.10..............................20...20..60........60....100..60...
....3050.........100....100.......50....
...
..20............70............30........70.....sampling algorithm progress:
[%]: ...90....sampling algorithm progress:
[%]: ........40....80.......60.....30..100......20......60.......40........................90.
.......80....Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
......60........10.50.........100...40.70....100.....
........50.80..............10...10070......90...90.....examining piece 13140835..13186990 (46156 bp)
.
viterbi algorithm progress:
[%]: ..sampling algorithm progress:
[%]: ........50.......80....20.................60..........sampling algorithm progress:
[%]: .........100.....90..70.
...........60..............603090...10...30..20......10.examining piece 26047999..26088254 (40256 bp)
.....30
.....viterbi algorithm progress:
[%]: ..70.................Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.............70...20..................100........
..40.examining piece 25236705..25276272 (39568 bp)
10.viterbi algorithm progress:
[%]: .sampling algorithm progress:
[%]: ........20............80......80..40...80........80.........................30......................70....5010..........100..10.......30.......90....20..50....90...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.....20.40....................................................90.100.......
60..20.20examining piece 42655985..42697343 (41359 bp)
..40viterbi algorithm progress:
[%]: 40................60.......................10080............
.....90...........70...30............50......30....10...30.sampling algorithm progress:
[%]: ..70....70.....10060.......50..........
.....80................3010.....10........examining piece 8026195..8063981 (37787 bp)
...viterbi algorithm progress:
[%]: ...........60..........90..50...40...............80..2040....80.............30...........20.10...............................60....20100.30.................70..........50...
..........90........90........40.....40...20.....3090.40......50.....100.
.....................
....50...30.....80.........examining piece 26439918..26483441 (43524 bp)
.......60..10070...40....
....viterbi algorithm progress:
[%]: ..............10060......................Warning: Block unknown_H is not significant enough, removed from profile.
.........sampling algorithm progress:
[%]: .........30.....100....50..90......70.....60.....
.......70................40.....10...10.....examining piece 10982108..11021426 (39319 bp)
....50viterbi algorithm progress:
[%]: 40........80..Warning: Block unknown_E is not significant enough, removed from profile.
...80.
......sampling algorithm progress:
[%]: .........60...............100..........2050...
.................2090.......40....8010...........examining piece 29288836..29374154 (85319 bp)
.......sampling algorithm progress:
[%]: .....viterbi algorithm progress:
[%]: .........3070..........70.100......
.........10..........50.30....................9040......20....................9080...............80.................40...50..Warning: Block unknown_B is not significant enough, removed from profile.
...60.......20..........80........10...30...50..............60.....100..........100.
..sampling algorithm progress:
[%]: ..........
.....50examining piece 30620358..30662831 (42474 bp)
..90...............70...viterbi algorithm progress:
[%]: .30........50......60...4010......examining piece 43277206..43319156 (41951 bp)
..................viterbi algorithm progress:
[%]: ....90...80...............60...20..........Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
6010......60..100.........70.......
.40..90....100......50................10..............examining piece 21106137..21157666 (51530 bp)
......sampling algorithm progress:
[%]: ............100........
.....100...viterbi algorithm progress:
[%]: ....60.20..
......70.10...examining piece 62429986..62472224 (42239 bp)
50.70....70...20............10.30...viterbi algorithm progress:
[%]: ..............10.......60.................
100............20.........80.30....30.30........60.............Warning: Block unknown_B is not significant enough, removed from profile.
...70.20..80.........................20...808010...............70....40..40.......10..40....examining piece 56523536..56561313 (37778 bp)
.viterbi algorithm progress:
[%]: .30.70......60.......................90.....................examining piece 25521415..25568615 (47201 bp)
............70....
.....viterbi algorithm progress:
[%]: ...50.....10.40.........5090......sampling algorithm progress:
[%]: ...80.....80...........50..........sampling algorithm progress:
[%]: ......90...90...20..............50............90....60.........20............60..................80.30.....90.......90.............60.....40.......10..............10..........60...............10.......70..30...............70100.....30...
.100........100..........
...................
..20100....70.....802080......
...9020....70100........20..Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.sampling algorithm progress:
[%]: ...70....40....
............sampling algorithm progress:
[%]: ....sampling algorithm progress:
[%]: .......90.......................examining piece 33389203..33432553 (43351 bp)
...90..10..viterbi algorithm progress:
[%]: .............................10.............1040..30.......100.......90
...20.50......sampling algorithm progress:
[%]: ............3080..................20.100.......
..10...20..30................40............10..100..............30..............40.....Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
...30..........50....40...............60....20.40.
.....50........40.90......examining piece 42101450..42141490 (40041 bp)
....viterbi algorithm progress:
[%]: .....40....20........................50.....60.........30....30.....................50..50................50.......60....7010.....................40100100..........50....
....60.............1008070..................30....examining piece 15781122..15819085 (37964 bp)
.....50...................70....examining piece 71940911..71981487 (40577 bp)

.9070.viterbi algorithm progress:
[%]: ....80..viterbi algorithm progress:
[%]: ......80...80.....60....20.....................60.....100...
...80.90106090....100.....................................................30..70..100....
409020....sampling algorithm progress:
[%]: ...................30..3060...........70...80............10080..
...30....
....70........10...................sampling algorithm progress:
[%]: .....examining piece 87427946..87471488 (43543 bp)
.....viterbi algorithm progress:
[%]: .....90.40.......Warning: Block unknown_H is not significant enough, removed from profile.
.............examining piece 3032843..3071202 (38360 bp)
...viterbi algorithm progress:
[%]: .....50...........20.............80.....40...100....50.
..1050...90...examining piece 50886536..50925451 (38916 bp)
.Warning: Block unknown_L is not significant enough, removed from profile.
...8010...10..60viterbi algorithm progress:
[%]: ......................30.............80.....................60...............examining piece 40867874..40909157 (41284 bp)
....viterbi algorithm progress:
[%]: .10....20.20............50..902040....Warning: Block unknown_L is not significant enough, removed from profile.
...........70.................9090..........70..100.................5030....examining piece 46125556..46172675 (47120 bp)
...
........30....viterbi algorithm progress:
[%]: .30....10...........60...........90.100....80......
.60...............sampling algorithm progress:
[%]: ..100...........
.......40......................7040......40...9070..20....10..................60................10..........
...........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.5020.......80..10050......
.....70examining piece 3201217..3256768 (55552 bp)
.....................examining piece 29288920..29327717 (38798 bp)
......50.30...viterbi algorithm progress:
[%]: sampling algorithm progress:
[%]: ...........viterbi algorithm progress:
[%]: ........9030.......................20...406060...10....10..............sampling algorithm progress:
[%]: ........100......
..............4050.........20......70...60......................70...60.......70..60..30...40.....100.......80.508070...........................100..40Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
70....
..........
........................80......50..sampling algorithm progress:
[%]: ....80.........examining piece 235824..273838 (38015 bp)
.60.............................60.....viterbi algorithm progress:
[%]: 70...90.......................8020...50.....90..............10.10070.
......70....sampling algorithm progress:
[%]: ...............10.80...80.........100......80.......30..............100..........
...........2090..80....80.......................90......100..9090
.........40....60..............1030.......20..Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_J is not significant enough, removed from profile.
3010.....90....................90..50..examining piece 44928933..44966827 (37895 bp)
..viterbi algorithm progress:
[%]: .......80.....examining piece 25842776..25904441 (61666 bp)
....Warning: Block unknown_Q is not significant enough, removed from profile.
....90...40..viterbi algorithm progress:
[%]: 100.20.....10..................
.......
......100...60...examining piece 47358073..47413399 (55327 bp)
.viterbi algorithm progress:
[%]: ....20..20..
..........50.70...............sampling algorithm progress:
[%]: 100..........100...sampling algorithm progress:
[%]: ..3040....70.........10...
......70..............10.................40..60.................100...............9020......
.30.
........105030...sampling algorithm progress:
[%]: ....100...............50........30...........70................3040..10......60......sampling algorithm progress:
[%]: 10....
..............40...........100...............20.....................20......10205080........
..80...70...40...............................60........sampling algorithm progress:
[%]: ..40......80.60......20......30..................30.....80.....30......sampling algorithm progress:
[%]: 90.............40.......20..50......70......sampling algorithm progress:
[%]: ........30......40........................sampling algorithm progress:
[%]: ...........90.20......50..10...10.......80........50...100............40
50..70.......90..........40..40......20....................90.........1009020........
..50.......10..........60..........................100...sampling algorithm progress:
[%]: ...
..........................30......60...50.....Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.....70..10.50.60....10........60..80....20..50..........10............708040..............20.examining piece 13784710..13822526 (37817 bp)
........80.....................................viterbi algorithm progress:
[%]: .........80.....2030....5060.........................90....100......60..30............10...60.....40...........90.....70.....60.....
.................100.........
...........50....................10100...70...
...20.....907070...30.examining piece 1384206..1424832 (40627 bp)
...viterbi algorithm progress:
[%]: ...60..60....................70...........30.............30....sampling algorithm progress:
[%]: .70..........70......80..................10.....20...........80..............30....80...........80..10............40...examining piece 6934538..6972354 (37817 bp)
...90.......80.................................90....viterbi algorithm progress:
[%]: ....90..20......20................100.80100....30...
.....100.....10030..

..9040...50......20......3040..............40.....90.....70.........sampling algorithm progress:
[%]: examining piece 19881722..19930596 (48875 bp)
.....viterbi algorithm progress:
[%]: .80..30.........
.............40...40..........90..100...............
..Warning: Block unknown_I is not significant enough, removed from profile.
...........60.90.............905040.......................50....40..10.10....examining piece 42904465..42942251 (37787 bp)
....viterbi algorithm progress:
[%]: 50....40.....100.............examining piece 27303308..27341208 (37901 bp)
.60.......
..................viterbi algorithm progress:
[%]: ....................................70.10.....5070..50.sampling algorithm progress:
[%]: ............100.....Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
20Warning: Block unknown_H is not significant enough, removed from profile.
20......100.
......8060..............
.....10..............80........60......30...sampling algorithm progress:
[%]: 20..................sampling algorithm progress:
[%]: 50...40...........20..............60examining piece 56490895..56528810 (37916 bp)
....3090..........30.......10Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
...........80...50......viterbi algorithm progress:
[%]: ....90..........30..6010....30.100..10..........
..............................................10.70........50.40.40.....examining piece 29042042..29080905 (38864 bp)
viterbi algorithm progress:
[%]: ...........70...40....20......50.70.4090.................90...................60...Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
......50..10........20....90..................50.....30............................20...examining piece 25684799..25723151 (38353 bp)
.viterbi algorithm progress:
[%]: ...........50.......60.......100.........20...50.40.........80...........40..........80...............60.........60.....30...............10...........70...........50...30.70...........100...........100...
.......30.
.60..............60..
.........20....70....sampling algorithm progress:
[%]: .10...20..60..............90.....100.sampling algorithm progress:
[%]: .40..............9070..80.............60.40........70.........40..100.....
...70......30........80.....80..60..Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
.10.........20...1080.7050......70..........
.............50...........80............examining piece 11948373..11988529 (40157 bp)
....50.........................viterbi algorithm progress:
[%]: .50..100......40.........8090
..2020......................90....................80..................100.sampling algorithm progress:
[%]: ..............60..
.50..sampling algorithm progress:
[%]: ....60.....80.....30100...100..90.....

....30.......................................20..............90....60....sampling algorithm progress:
[%]: ...10..........90.40...............Warning: Block unknown_G is not significant enough, removed from profile.
..30.60....70..40...70..70..1060..............90..10............examining piece 35881793..35924233 (42441 bp)
.....90.............viterbi algorithm progress:
[%]: 100...50.......20.......
....Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_H is not significant enough, removed from profile.
.examining piece 9088593..9133820 (45228 bp)
........viterbi algorithm progress:
[%]: 90.........20........50........100.70...................100..............
...80..
.80..20.10...60.....1030............30................examining piece 49651431..49708526 (57096 bp)
...........sampling algorithm progress:
[%]: ................viterbi algorithm progress:
[%]: ........6070....20.........sampling algorithm progress:
[%]: ...40.Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...............70........20...70.................................40.......9010....50.....30.3090..........100.............examining piece 20711741..20756410 (44670 bp)
.....viterbi algorithm progress:
[%]: .30........................80.70......20..
......7080..10..30........60....................50...80........40...1080.10..80...30......................................100.........100........
....sampling algorithm progress:
[%]: ..70...
....40..4040.80.....90............40.....50................30...100.60.................50.20.........80......100.......20...................................100.20..90...60..10
..60........90...90Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
.Warning: Block unknown_E is not significant enough, removed from profile.
.....90.......50..50............
....70....................70............................100.30examining piece 46457..84264 (37808 bp)
.......
.....70....30.......40.2080....
....100viterbi algorithm progress:
[%]: ..80........
....sampling algorithm progress:
[%]: .........sampling algorithm progress:
[%]: ...80......80.........30....90..40...........60.................Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.100....50...............examining piece 58797700..58840205 (42506 bp)
.40.80....10010..100......
..30........viterbi algorithm progress:
[%]: .
100......examining piece 16409173..16456805 (47633 bp)
90..10.40..viterbi algorithm progress:
[%]: .
...........60
...10....90.................50....................20...............60.....90.examining piece 57312123..57356914 (44792 bp)
..viterbi algorithm progress:
[%]: ..examining piece 27608465..27648993 (40529 bp)
70.Warning: Block unknown_A is not significant enough, removed from profile.
..viterbi algorithm progress:
[%]: ............sampling algorithm progress:
[%]: 2070...sampling algorithm progress:
[%]: ..40...20.......10.....................4050.......sampling algorithm progress:
[%]: .....100......examining piece 14120978..14160459 (39482 bp)
.......50...30..
............80...viterbi algorithm progress:
[%]: ..............10...............10.100.........10......10......30...
........30.50..10....50.............................20.....40.90....10..........sampling algorithm progress:
[%]: ...............20.................80.....20...Warning: Block unknown_A is not significant enough, removed from profile.
...........90.......6020.......3020.......40............40.......60100..50......10...
...........60......30....60........examining piece 22467183..22508574 (41392 bp)
.............40..sampling algorithm progress:
[%]: ...60viterbi algorithm progress:
[%]: .....................20.50..............................30.204050.....50.60.............50........30....................30.90...........90.................70......50....................60......30........107070............70.........40..90..60.....30.70.........60...................70........................40.........10.....40.........................80.........100..70.70..80....80.......
...70.....20..........508040........50.......................100..........40..80.90.60...............80...........90.....
.................50..9060..8010......100......
...90...............30.......80.....60..Warning: Block unknown_A is not significant enough, removed from profile.
.............90..100.......
.........70..100....
....50....60......90....examining piece 37187210..37226004 (38795 bp)
.100...........
80...............90viterbi algorithm progress:
[%]: ....80..40...............60.......100....50.....
...Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
.100.........Warning: Block unknown_B is not significant enough, removed from profile.
10..90..
60..examining piece 21796558..21834467 (37910 bp)
..viterbi algorithm progress:
[%]: Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.70.......90.................50examining piece 38985119..39028429 (43311 bp)
..............viterbi algorithm progress:
[%]: .100..examining piece 40798101..40875404 (77304 bp)
...sampling algorithm progress:
[%]: ..
70.........100.........
..................10..examining piece 38458093..38502671 (44579 bp)
70.80..viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: .70....examining piece 55812878..55866355 (53478 bp)
90....viterbi algorithm progress:
[%]: 60.....................10...........................100..70...1060examining piece 51535087..51575968 (40882 bp)
..viterbi algorithm progress:
[%]: ...................100....70...80..70..90..10.....
..20...20..
............examining piece 60476516..60522577 (46062 bp)
.viterbi algorithm progress:
[%]: ..........20.............10....80..........................sampling algorithm progress:
[%]: .......1008090.................30.20...examining piece 87208570..87252759 (44190 bp)
............100..........viterbi algorithm progress:
[%]: ...
.30.10....10.....70..10.............20....20....sampling algorithm progress:
[%]: .20...................30...100..90...........
.sampling algorithm progress:
[%]: ...40...20..30100............................90......10.....40......................10.....208030..................100.................
.8050........10...20......20..
............40.30.............30....50..............40....80examining piece 27852150..27889993 (37844 bp)
.....viterbi algorithm progress:
[%]: .........sampling algorithm progress:
[%]: .....3020.4050.................6020......30.............................100..10......30....................
..........6040......................90...........Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_I is not significant enough, removed from profile.
....100.10..4060......20..40......30............70.....30...5070.............30......40.....sampling algorithm progress:
[%]: ..............50....20........................50..30........4010..80........examining piece 2229498..2271146 (41649 bp)
60..20.viterbi algorithm progress:
[%]: ..40............10.....50....90...........80....................
.50............40..........60...90.....40.......7070...20...90....10..................50....100.......................
.5030
...........100........
70......30.....90.......80..................................................20..60...60..sampling algorithm progress:
[%]: ..4050.50....80................90..........40.....60...100........sampling algorithm progress:
[%]: 6010080...
...60.....50..............Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
...........70........10..100...30.90..
........70..........100........60...................50........examining piece 10877840..10916343 (38504 bp)
.....Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
..
.......80.............viterbi algorithm progress:
[%]: .80.........2070..10.....sampling algorithm progress:
[%]: .....examining piece 19028308..19066211 (37904 bp)
...40viterbi algorithm progress:
[%]: ...100...80.......100....
.....70........examining piece 16298012..16364811 (66800 bp)
....viterbi algorithm progress:
[%]: ....
.9060..80..............60...sampling algorithm progress:
[%]: 90.sampling algorithm progress:
[%]: .
.......10.....30..sampling algorithm progress:
[%]: .....................60....................40.90.....90......20.........50..............100.........70....
20.10........10.sampling algorithm progress:
[%]: .....10.100...40.....
..........70....2010.............sampling algorithm progress:
[%]: ........100....10...........
.....................20.30...................5010.50...30.........80............20...60...............10....30.......20....100.....20.80.........70.30....10
......4020.......70.................60..30.....20............examining piece 13567219..13615274 (48056 bp)
examining piece 5812686..5851556 (38871 bp)
........viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: .................30.............40........40.40.................................sampling algorithm progress:
[%]: .40........70...705090.10....3070.50...................30..........................50..80...........20...............40.1060.............20..10...................50.......................80.........30...........70....100.........60.....90....
...30..................20......504060..80......50........80........40..............................40..9080..20.................70....30.......90..2080....30..........6030.................................................50.50..100.........60
........100...40..........
.......7040.....80...............30................9060....60examining piece 14171922..14209799 (37878 bp)
..50.viterbi algorithm progress:
[%]: .......80.....................40..50............70..40.......70..60.90....10..10.........................................................30..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
....607080.20..50......9040.............100.......
..............................80......90...70.5070.examining piece 3824789..3862761 (37973 bp)
..30.viterbi algorithm progress:
[%]: .80.70.100...50........60............
.............90....80................................40.10...............80...90....examining piece 71691539..71729394 (37856 bp)
.....50....90...........sampling algorithm progress:
[%]: ..60.........80......................50.viterbi algorithm progress:
[%]: .....90...........90.....20........90.................60.10...........80...90........70...6060..100.................
...examining piece 59859121..59897782 (38662 bp)
...............100..viterbi algorithm progress:
[%]: ...100...
...203090..
...40........100.......60....70...20.
..100100...........70.
........sampling algorithm progress:
[%]: ...
30.......................40...............10.......70...Warning: Block unknown_D is not significant enough, removed from profile.
...80.....100.sampling algorithm progress:
[%]: ...........100
.1040.....................80........70...20.........90.....50...
...10examining piece 37580775..37626687 (45913 bp)
.....viterbi algorithm progress:
[%]: examining piece 29485453..29526070 (40618 bp)
.50.60..........2090..70..........viterbi algorithm progress:
[%]: .................sampling algorithm progress:
[%]: ..30......................80....100...20.........60..........30.................10.80...100..Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_K is not significant enough, removed from profile.
.........
.60.......40..........10....30...
.........70......sampling algorithm progress:
[%]: ........40.examining piece 748510..786311 (37802 bp)
......viterbi algorithm progress:
[%]: ............10................100....sampling algorithm progress:
[%]: 90..........examining piece 17598534..17688515 (89982 bp)
......50...40.............20..20....8010..80.50...10...........viterbi algorithm progress:
[%]: ..80............50..........50....
................5070...90..................20......10...90.90...60.30...20......70........20......................sampling algorithm progress:
[%]: ..........60....30......30..............................100.100..2090...
..70....30..............40.......80..........40.7010...
......................................100.......60.20sampling algorithm progress:
[%]: 10.....80..30.40........
50.......90..100.40100.......8050.............
.
...30..90...................................60..sampling algorithm progress:
[%]: ....50...90Warning: Block unknown_E is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
....40......90sampling algorithm progress:
[%]: ...20.90.........................60...10........10.........70.........................100..........60
.100..50....80...
......examining piece 24873271..24911120 (37850 bp)
.....viterbi algorithm progress:
[%]: ..............50....80.........30....70...10...........40...10........60.Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
20Warning: Block unknown_H is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
........70.........6020.........90.....100.....100...............
.......................80
10..............40.....100....
..3070....80...20..examining piece 56186567..56226183 (39617 bp)
......viterbi algorithm progress:
[%]: ............20.......sampling algorithm progress:
[%]: ........30.....50.............90....100........60..........50..80sampling algorithm progress:
[%]: ...........90.............40.10......20.....100.............examining piece 14950500..14988568 (38069 bp)
examining piece 43891763..43930830 (39068 bp)

..30.....examining piece 25773367..25812547 (39181 bp)
viterbi algorithm progress:
[%]: .....90.....100...........
..........30.10...40...90.....viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: .20......60...100...50.....7020....10.
.................................10.70.....100....30sampling algorithm progress:
[%]: .
.........40....................sampling algorithm progress:
[%]: .6050.......40.....70...6070.......................20.......40...........10.................................10....5020.......................
..........5020......20......10806050...................examining piece 48545806..48605851 (60046 bp)
.30....80.......viterbi algorithm progress:
[%]: 70.examining piece 20577853..20619367 (41515 bp)
........................3020.60...........30..examining piece 2100059..2147172 (47114 bp)
30.....viterbi algorithm progress:
[%]: ...........viterbi algorithm progress:
[%]: ...........30...60........................sampling algorithm progress:
[%]: .....90...........70...70.............40..20.60..40...................70....30..............................80................80...30...............40.50100.30....70...10...
.....90................50....40........80.....10..........90.........30.......40....70....100..60.............1040..............10.......................100.80........
...........90.......60.80.
...20.70..............90.......8050..........50.............50.40.80...80........................80...40.......10...................100..70..20..........90.....
..100..20.....20...
......90.....sampling algorithm progress:
[%]: .3060.......50...............90....60.................100.......100.....80.
.sampling algorithm progress:
[%]: ....examining piece 7779335..7820707 (41373 bp)
.....viterbi algorithm progress:
[%]: ..100.50..
.......
................................3030......60...examining piece 87404971..87443504 (38534 bp)
..100...40........
..sampling algorithm progress:
[%]: 1060.viterbi algorithm progress:
[%]: .....90......Warning: Block unknown_B is not significant enough, removed from profile.
.101070.....Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.......30..50................40................................20.......examining piece 14589227..14629113 (39887 bp)
.....viterbi algorithm progress:
[%]: ........70...examining piece 24776244..24829147 (52904 bp)
..10010..viterbi algorithm progress:
[%]: ......
.......40.....50.40.10...20................30........30...................20...........80.......10..20.........80..........9070..........40.........60...examining piece 41775378..41816020 (40643 bp)
..90...viterbi algorithm progress:
[%]: .......60..50...10examining piece 20111354..20152896 (41543 bp)
..........30..........60.100...50....5030........viterbi algorithm progress:
[%]: ..20.............90...30...................................20............60...............40..40.............60..........examining piece 26723993..26766815 (42823 bp)
..10......10080.......2060.
...viterbi algorithm progress:
[%]: .90...70...70....30..70...............40..50....60
..............40..............50.........80........................70.................10.......60..Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
................sampling algorithm progress:
[%]: ...100.90........40.80.50.90..20..........
..........90........examining piece 8199388..8238672 (39285 bp)
...viterbi algorithm progress:
[%]: .20.........30......100.70...
...60........80.70..............sampling algorithm progress:
[%]: ...20......................10................30.......100.....60.50...10....80......100......10.........90............................Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.Warning: Block unknown_Y is not significant enough, removed from profile.
..Warning: Block unknown_AK is not significant enough, removed from profile.
Warning: Block unknown_AO is not significant enough, removed from profile.
20...90..70.....40.........30.70...........20.
90.70.....
.................30....50......examining piece 48721083..48770866 (49784 bp)
.sampling algorithm progress:
[%]: .70..............40.30....100..60.......50..20.......viterbi algorithm progress:
[%]: .40.....100..100...
...
.......
..80.......100..........30....50......
...............80........sampling algorithm progress:
[%]: 10....60.......80.sampling algorithm progress:
[%]: .60sampling algorithm progress:
[%]: 80....................................30........................70...4070...90...Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
............10.....70..40................80.10.....80.20..........10....50.......................90.......examining piece 36570607..36612175 (41569 bp)
....examining piece 8183143..8223920 (40778 bp)
....20viterbi algorithm progress:
[%]: ......viterbi algorithm progress:
[%]: .......40..90......50.................40....80.............................20........100.....
...3010.............20......30100.......50............80.......100......
...........
.........60..40..20...........30.........60.......50..50...........5030.60.......sampling algorithm progress:
[%]: .50.......40......30.90...........................Warning: Block unknown_E is not significant enough, removed from profile.
....70......examining piece 40981514..41020836 (39323 bp)
.40..70...viterbi algorithm progress:
[%]: .....60..9010......60.....................40.............40....examining piece 2075985..2127134 (51150 bp)
....viterbi algorithm progress:
[%]: ................90...50....20.......10.60.........805070....................................80.50......................30.........90..20........10......80.50................................60....90....60.....40.........60............30............90...............90..70...............50.............60...60.............10070....70.2040.100.100......
...70.....
.....
.......60..70...40...............100...10070.....90.
..50....sampling algorithm progress:
[%]: ..............10070708080..................sampling algorithm progress:
[%]: ..
.....30.....100.................3060...........80Warning: Block unknown_C is not significant enough, removed from profile.
...80....80..80...............10.....
....90......10.....80.......90..........90...........
....examining piece 6565370..6605766 (40397 bp)
...viterbi algorithm progress:
[%]: ...Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
......10...20...................40.........sampling algorithm progress:
[%]: 10..100..100...70.70..

......90.................40.sampling algorithm progress:
[%]: 101009030......80..20..
.............examining piece 10321832..10359639 (37808 bp)
......viterbi algorithm progress:
[%]: ......90......10..10......sampling algorithm progress:
[%]: ............2080..sampling algorithm progress:
[%]: ..................4020...................................50....70.100..100...10...100......20
.........
..10..10...10.50....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
...............30.3090............................................3030.examining piece 17897121..17934991 (37871 bp)
.......viterbi algorithm progress:
[%]: .50..2020.60............20....................examining piece 6082940..6120714 (37775 bp)
...viterbi algorithm progress:
[%]: .......40.........
.....................100100....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
...40......
..30..70.....10.30.20sampling algorithm progress:
[%]: ..........60.40
.................10Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.....................sampling algorithm progress:
[%]: .50...............5030.........examining piece 2654694..2696104 (41411 bp)
..40...80.viterbi algorithm progress:
[%]: ............4040............................20.....................1090...80......20.sampling algorithm progress:
[%]: ..examining piece 25058410..25096235 (37826 bp)
.......viterbi algorithm progress:
[%]: .....50.............9060....5060...50.............10....................3040..10...........................20...60..50........30..........10......100......60...
.....70...60.......30.........10..............................70...............30....70...........50..2040........70.60....60.......8070.100...20.50.................................20...............40.......40......40...30.............80............60.......80...9080.........................20.....50...60.....80Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
...50.......................40......70...90............30........100.9050........
..................................60......90......503070....100........
.....60examining piece 26964659..27019369 (54711 bp)
.......viterbi algorithm progress:
[%]: ..70...100......80
..
........100.50....60..........70.......70.60....
80.......40sampling algorithm progress:
[%]: ........30....60..........100.......................70
80.........8080.......70..Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_AA is not significant enough, removed from profile.
Warning: Block unknown_AD is not significant enough, removed from profile.
.90........................sampling algorithm progress:
[%]: .....Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
.....Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
..............10........40..5010........90......80...sampling algorithm progress:
[%]: .....90.......70.examining piece 55349652..55387507 (37856 bp)
.80.....viterbi algorithm progress:
[%]: 10.90..........examining piece 3637112..3678052 (40941 bp)
90.....viterbi algorithm progress:
[%]: .................examining piece 21818876..21871160 (52285 bp)
80.......viterbi algorithm progress:
[%]: .......100..........
............90......70.................20...........4020.............6010..90......60......10............100100.10080..10...
90.
......
..70.80.30....................................20..................30...Warning: Block unknown_I is not significant enough, removed from profile.
20Warning: Block unknown_L is not significant enough, removed from profile.
40Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
.....50...20.................70Warning: Block unknown_H is not significant enough, removed from profile.
........................10...Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
...50..............90..90.......examining piece 26177072..26228323 (51252 bp)
90..examining piece 50930423..50979618 (49196 bp)
....viterbi algorithm progress:
[%]: ........viterbi algorithm progress:
[%]: 40.20..........30.60examining piece 25436697..25484994 (48298 bp)
.....viterbi algorithm progress:
[%]: ...5030..............90......Warning: Block unknown_C is not significant enough, removed from profile.
.............80.............................70....100...............50.........100............40....
...100......10.8030.80...
.....90......40.....60examining piece 28557331..28595120 (37790 bp)
.viterbi algorithm progress:
[%]: ...10.......100
..100...90.70........10............
60.90..........sampling algorithm progress:
[%]: .50.........................sampling algorithm progress:
[%]: .
....20sampling algorithm progress:
[%]: 10........20...............100.......
...........30........10..........100sampling algorithm progress:
[%]: .....50....
....7010............60.60.................................10..20.....70........20......20..........80.100...............40.20...........90.80.sampling algorithm progress:
[%]: 30...70....................30Warning: Block unknown_B is not significant enough, removed from profile.
...Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.....20..60
10.20............................Warning: Block unknown_E is not significant enough, removed from profile.
.40.80............30............40.................90......80.......50.......examining piece 40561915..40604440 (42526 bp)
...30...viterbi algorithm progress:
[%]: .100...10.....30...50...........40.......examining piece 19678126..19728250 (50125 bp)
.......viterbi algorithm progress:
[%]: ............80..sampling algorithm progress:
[%]: .....60................
.20.....100....40.....
.60..90..................70......70..40.....70..............10..30...20.....70........................100........20....100..80.....
..................50..50..sampling algorithm progress:
[%]: .80..100.30.......
..30.............90........
............30.................90.90..50.100........100......
...10examining piece 9238734..9302580 (63847 bp)
60.....90viterbi algorithm progress:
[%]: ...20....................100....40
......Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
Warning: Block unknown_Z is not significant enough, removed from profile.
Warning: Block unknown_AE is not significant enough, removed from profile.
Warning: Block unknown_AF is not significant enough, removed from profile.
.10......1040.......60......50.8040..sampling algorithm progress:
[%]: .20.........70.............................40....examining piece 57924591..57976678 (52088 bp)
......viterbi algorithm progress:
[%]: 30.......Warning: Block unknown_O is not significant enough, removed from profile.
...sampling algorithm progress:
[%]: ..................30..10...........50......50..80.....90....80..examining piece 7596490..7638644 (42155 bp)
..............viterbi algorithm progress:
[%]: examining piece 19290068..19330542 (40475 bp)
..viterbi algorithm progress:
[%]: .40.........20.....
...............40.30...7010....20.........................10.............100.......sampling algorithm progress:
[%]: ...90........60.....100....1090....50.........
...20......6010.........30.......
..20.......60....................10.................100............
.......6030.............30..20....6040.....10.70......sampling algorithm progress:
[%]: ............80..20.......40...........50.......2050..........7040.................sampling algorithm progress:
[%]: ........50.........10........7030................40....100........................50.80......
.......2080.10........................20.60........................................40.....30....6020...........................904090.sampling algorithm progress:
[%]: ..30.30.30....50......80.......90.....70..........90.....30................70...........30...................10.....70100....40..50..
..................40....................80..............4080.......100..20............
..50........50..................90....70.........................30..60.909040...100......60.......60....4060............50.
........20......................10040.......100......70.
......100...
....70.100..............
...505050.
40..........sampling algorithm progress:
[%]: .50....80.......60..........70........80...............60............10..90...................................80.....90...70.......20....100..100...
.......60..................80.....80100....30
......
50.sampling algorithm progress:
[%]: ...........................90...4060.....................50..6060..70...100..50.
60....80..90.50..................60........sampling algorithm progress:
[%]: ....20..........30................70..70.......80....10......10..................80........100...60.......
20...90..............90........................3090........100.70.sampling algorithm progress:
[%]: .
..60.........................70..70.40...10.......20...............60....70.......100.50....20.
............30........................6030.............................70...40...7080..................3070....50.......70..90..70..80...................60...80..................90.....80.100..70.......................100...

......80....80..........40....40..90.......80....80..80.........100
............80.sampling algorithm progress:
[%]: ............90.............50..........9010.....................80.......90...........20........40..100100.............
.90..60..
......30...90.........sampling algorithm progress:
[%]: .50........................4090.................90....10.........sampling algorithm progress:
[%]: ...7050.............60.............................10...20..10010060..50..............
.......2090.100........
.......
....70.30.708010030..........................90......40......80
.............40....sampling algorithm progress:
[%]: ...sampling algorithm progress:
[%]: 50....................................90....80...60....90....10......50........10..................100.70......100.....
....20.sampling algorithm progress:
[%]: ....................100..80...60..20.........100.
.........30..........10010.9090.......

....
..................10070.
30..40....100.20.................
.............50..sampling algorithm progress:
[%]: ..40.80.30sampling algorithm progress:
[%]: .............................sampling algorithm progress:
[%]: ..100.........60..10.
......50.....40..10........90....................70..20...sampling algorithm progress:
[%]: ........60.......10..........60..20...50............100...80..30.
...........sampling algorithm progress:
[%]: ........................20........3070..6010...40..90.................................10...................30.50...70.100.40..
80.............................20...20......60..........8050.40..............90......................70.30.................90..5060.........30......100........
..80.......40...........100.....
...70.60.......90............50.............40.......100.
80..70..........60.......................9080.7050...........................80...100...
..90.........90.....60.......70...100100
.
......70.........80..........90...30......100
....80..........90..........100.
.sampling algorithm progress:
[%]: ........10.........20.40..........30............40.......50..50...........60...........70..........80...60......90...........100
....70........80........90........100
sampling algorithm progress:
[%]: ........10........20........30........40........50........60........70........80........90........100
Will create parameters for a EUKARYOTIC species!
creating directory /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/ ...
creating /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg ...
creating /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_weightmatrix.txt ...
creating /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_metapars.cfg ...
The necessary files for training BUSCO_Pgenerosa_v074_4076027899 have been created.
Now, either run etraining or optimize_parameters.pl with --species=BUSCO_Pgenerosa_v074_4076027899.
etraining quickly estimates the parameters from a file with training genes.
optimize_augustus.pl alternates running etraining and augustus to find optimal metaparameters.

# Read in 578 genbank sequences.
Quantiles of the GC contents in the training set:
0%	0.311
5%	0.324	10%	0.328
15%	0.329	20%	0.331
25%	0.332	30%	0.333
35%	0.335	40%	0.336
45%	0.337	50%	0.338
55%	0.339	60%	0.341
65%	0.342	70%	0.343
75%	0.344	80%	0.346
85%	0.348	90%	0.35
95%	0.354	100%	0.396
HMM-training the parameters...
i= 0 bc= (0.237, 0.263, 0.263, 0.237)
 ** building model for exons *EXON*
gene g1.t1 transcr. 1 in sequence PGA_scaffold11__79_contigs__length_51449921_37548411-37573503: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold14__91_contigs__length_45393038_43237612-43252661: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold8__63_contigs__length_61151155_23748705-23770734: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_17492393-17505227: Initial exon does not begin with start codon but with cta
gene g1.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_87419082-87426785: coding length not a multiple of 3. Skipping...
start codon frequencies: ATG(573)
# admissible start codons and their probabilities: ATG(1), CTG(0), TTG(0)
 number of bases in the reading frames: 210660 211199 211205
--- frame = 0 ---    minPatSum = 233
--- frame = 1 ---    minPatSum = 233
--- frame = 2 ---    minPatSum = 233
--- initial frame = 0 ---    minPatSum = 233
--- initial frame = 1 ---    minPatSum = 233
--- initial frame = 2 ---    minPatSum = 233
--- internal exon terminal frame = 0 ---    minPatSum = 233
--- internal exon terminal frame = 1 ---    minPatSum = 233
--- internal exon terminal frame = 2 ---    minPatSum = 233
single, initial, internal, terminal mean exon lengths :
868	101	101	165
single exon : 7
initial exon 0 : 244
initial exon 1 : 187
initial exon 2 : 135
internal exon 0 : 2124
internal exon 1 : 1554
internal exon 2 : 1455
terminal exon : 567
Frequency of stop codons:
tag:  129 (0.225)
taa:  193 (0.336)
tga:  252 (0.439)
end *EXON*
Storing parameters to file...
Writing exon model parameters [1] to file /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_exon_probs.pbl.
WARNING: parameter --cpus has value 28 but parameter --kfold has value 8. --kfold limits the number of --cpus that can be used. Will not use only 8 CPUs. Please abort and restart with --kfold=28 to really use that number of CPUs!
Splitting training file into 8 buckets...
Reading in the meta parameters used for optimization from /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/generic/generic_metapars.cfg...
Reading in the starting meta parameters from /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 6 3 8 5 1 
starting accuracy: 0.8502, 0.6065, 0.5355, 0.5476, 0.0709, 0.0431, -1.00, -1.00, starting target: 0.5491
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
bucket 7 2 6 4 3 8 5 1 
bucket 7 2 3 4 8 6 1 5 
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5195	0.5300	0.5475	0.5491
improving parameter /Constant/dss_start curently set to 3
1-3
/Constant/dss_start: checking values 1	2	3
bucket 7 2 6 4 3 8 1 5 
found improvement: 0.8532, 0.6035, 0.5420, 0.5525, 0.0830, 0.0502, -1.00, -1.00, optimal target: 0.5533
changing /Constant/dss_start to 1
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	2
/Constant/ass_upwindow_size	30
/IntronModel/d	100
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 3 4 6 8 5 1 
retrieve accuracy from previous computation
values  1	2	3
targets 0.5533	0.5532	0.5491
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 6 4 8 5 1 
retrieve accuracy from previous computation
values  1	2	3
targets 0.5514	0.5532	0.5533
improving parameter /Constant/ass_end curently set to 2
0-4
/Constant/ass_end: checking values 0	1	2	3	4
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 6 3 4 8 5 1 
found improvement: 0.8548, 0.6030, 0.5446, 0.5545, 0.0796, 0.0483, -1.00, -1.00, optimal target: 0.5538
changing /Constant/ass_end to 1
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	100
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
retrieve accuracy from previous computation
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 6 3 4 8 5 1 
values  0	1	2	3	4
targets 0.5527	0.5538	0.5533	0.5400	0.5218
/Constant/ass_end: checking values 1	2
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2
targets 0.5538	0.5533
improving parameter /Constant/ass_upwindow_size curently set to 30
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 6 3 8 4 5 1 
bucket 7 2 3 6 8 4 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 8 3 6 1 5 
values  1	13	25	37	50
targets 0.5272	0.5477	0.5532	0.5518	0.5536
improving parameter /IntronModel/d curently set to 100
100-950
/IntronModel/d: checking values 100	312	525	737	950
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
found improvement: 0.8549, 0.6036, 0.5455, 0.5554, 0.0779, 0.0474, -1.00, -1.00, optimal target: 0.5540
changing /IntronModel/d to 525
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	525
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 3 8 6 4 5 1 
found improvement: 0.8544, 0.6045, 0.5457, 0.5581, 0.0796, 0.0487, -1.00, -1.00, optimal target: 0.5550
changing /IntronModel/d to 737
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	737
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
found improvement: 0.8543, 0.6059, 0.5450, 0.5596, 0.0813, 0.0498, -1.00, -1.00, optimal target: 0.5556
changing /IntronModel/d to 950
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	3
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
values  100	312	525	737	950
targets 0.5538	0.5527	0.5540	0.5550	0.5556
/IntronModel/d: checking values 738	791	844	897	950
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 8 6 5 1 
bucket 7 2 3 6 4 8 5 1 
retrieve accuracy from previous computation
values  738	791	844	897	950
targets 0.5551	0.5556	0.5555	0.5555	0.5556
improving parameter /IntronModel/ass_motif_memory curently set to 3
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 3 4 8 6 5 1 
found improvement: 0.8540, 0.6064, 0.5444, 0.5600, 0.0865, 0.0532, -1.00, -1.00, optimal target: 0.5565
changing /IntronModel/ass_motif_memory to 2
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	3
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5456	0.5541	0.5565	0.5556
/IntronModel/ass_motif_memory: checking values 2
retrieve accuracy from previous computation
values  2
targets 0.5565
improving parameter /IntronModel/ass_motif_radius curently set to 3
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
bucket 7 2 3 4 8 6 5 1 
bucket 7 2 3 4 6 8 5 1 
found improvement: 0.8541, 0.6061, 0.5444, 0.5600, 0.0899, 0.0556, -1.00, -1.00, optimal target: 0.5570
changing /IntronModel/ass_motif_radius to 1
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	1
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 4 3 8 6 5 1 
found improvement: 0.8549, 0.6066, 0.5455, 0.5625, 0.0882, 0.0542, -1.00, -1.00, optimal target: 0.5576
changing /IntronModel/ass_motif_radius to 4
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	3
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
values  0	1	2	3	4
targets 0.5562	0.5570	0.5566	0.5565	0.5576
/IntronModel/ass_motif_radius: checking values 4
retrieve accuracy from previous computation
values  4
targets 0.5576
improving parameter /ExonModel/tis_motif_memory curently set to 3
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
bucket 7 2 6 4 3 8 5 1 
found improvement: 0.8586, 0.6051, 0.5481, 0.5620, 0.0951, 0.0574, -1.00, -1.00, optimal target: 0.5594
changing /ExonModel/tis_motif_memory to 0
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	0
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 6 3 4 8 5 1 
found improvement: 0.8581, 0.6040, 0.5495, 0.5650, 0.0968, 0.0578, -1.00, -1.00, optimal target: 0.5602
changing /ExonModel/tis_motif_memory to 1
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	2
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5594	0.5602	0.5587	0.5576
/ExonModel/tis_motif_memory: checking values 1
retrieve accuracy from previous computation
values  1
targets 0.5602
improving parameter /ExonModel/tis_motif_radius curently set to 2
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
bucket 7 2 4 3 6 8 5 1 
found improvement: 0.8580, 0.6061, 0.5501, 0.5657, 0.1003, 0.0605, -1.00, -1.00, optimal target: 0.5614
changing /ExonModel/tis_motif_radius to 0
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	20
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 4 3 6 8 5 1 
values  0	1	2	3
targets 0.5614	0.5605	0.5602	0.5593
improving parameter /Constant/trans_init_window curently set to 20
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
found improvement: 0.8586, 0.6082, 0.5503, 0.5676, 0.1020, 0.0620, -1.00, -1.00, optimal target: 0.5626
changing /Constant/trans_init_window to 25
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	15
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
values  0	6	12	18	25
targets 0.5578	0.5603	0.5591	0.5612	0.5626
/Constant/trans_init_window: checking values 19	20	22	23	25
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
values  19	20	22	23	25
targets 0.5614	0.5614	0.5607	0.5608	0.5626
improving parameter /Constant/init_coding_len curently set to 15
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
bucket 7 2 3 4 6 8 5 1 
found improvement: 0.8595, 0.6069, 0.5520, 0.5713, 0.1073, 0.0642, -1.00, -1.00, optimal target: 0.5643
changing /Constant/init_coding_len to 0
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	5.0
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 8 6 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
values  0	4	9	13	18
targets 0.5643	0.5618	0.5633	0.5618	0.5625
/Constant/init_coding_len: checking values 1	2	3	4
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 6 4 8 5 1 
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5638	0.5624	0.5621	0.5618
improving parameter /ExonModel/patpseudocount curently set to 5.0
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 8 6 5 1 
found improvement: 0.8600, 0.6070, 0.5530, 0.5707, 0.1073, 0.0640, -1.00, -1.00, optimal target: 0.5645
changing /ExonModel/patpseudocount to 2.75
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	2.75
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 3 4 6 8 5 1 
found improvement: 0.8602, 0.6081, 0.5524, 0.5713, 0.1089, 0.0653, -1.00, -1.00, optimal target: 0.5650
changing /ExonModel/patpseudocount to 3.875
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	10
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 3 4 6 8 5 1 
values  0.5	1.625	2.75	3.875	5
targets 0.5638	0.5631	0.5645	0.5650	0.5643
/ExonModel/patpseudocount: checking values 2.75	3.3125	3.875	4.4375	5
retrieve accuracy from previous computation
bucket 7 2 4 6 3 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 4 6 3 8 5 1 
retrieve accuracy from previous computation
values  2.75	3.3125	3.875	4.4375	5
targets 0.5645	0.5645	0.5650	0.5649	0.5643
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 6 4 3 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
values  0	2	5	7	10
targets 0.5650	0.5650	0.5650	0.5650	0.5650
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 4 6 3 8 5 1 
values  0	1	2	3
targets 0.5650	0.5650	0.5650	0.5650
improving parameter /Constant/intterm_coding_len curently set to 5
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 6 4 3 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 4 6 3 8 5 1 
values  0	3	6	9	13
targets 0.5626	0.5650	0.5638	0.5645	0.5630
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.3
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 5 8 1 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5648	0.5646	0.5650	0.5648	0.5645
improving parameter /ExonModel/minwindowcount curently set to 10
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 6 4 3 8 5 1 
bucket 7 2 6 3 4 8 5 1 
found improvement: 0.8600, 0.6079, 0.5523, 0.5711, 0.1106, 0.0664, -1.00, -1.00, optimal target: 0.5651
changing /ExonModel/minwindowcount to 11
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.4
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
values  1	4	8	11	15
targets 0.5630	0.5649	0.5641	0.5651	0.5645
/ExonModel/minwindowcount: checking values 8	9	11	12	14
retrieve accuracy from previous computation
bucket 7 2 6 3 4 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 4 6 8 3 5 1 
values  8	9	11	12	14
targets 0.5641	0.5642	0.5651	0.5648	0.5644
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
values  0.5	2.125	3.75	5.375	7
targets 0.5651	0.5651	0.5651	0.5651	0.5647
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 8 6 5 1 
bucket 7 2 4 6 3 8 5 1 
values  0.5	2.125	3.75	5.375	7
targets 0.5650	0.5650	0.5649	0.5651	0.5650
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.4
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
bucket 7 2 4 6 3 8 5 1 
found improvement: 0.8596, 0.6086, 0.5521, 0.5729, 0.1106, 0.0664, -1.00, -1.00, optimal target: 0.5655
changing /IntronModel/slope_of_bandwidth to 0.05
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	4
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 4 6 3 8 5 1 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5655	0.5649	0.5650	0.5653	0.5652
/IntronModel/slope_of_bandwidth: checking values 0.05	0.084375	0.11875	0.153125	0.1875
retrieve accuracy from previous computation
bucket 7 2 3 8 4 6 5 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 3 4 8 6 5 1 
retrieve accuracy from previous computation
values  0.05	0.084375	0.11875	0.153125	0.1875
targets 0.5655	0.5652	0.5648	0.5650	0.5649
improving parameter /IntronModel/minwindowcount curently set to 4
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
bucket 7 2 6 3 4 8 5 1 
found improvement: 0.8596, 0.6085, 0.5521, 0.5724, 0.1123, 0.0674, -1.00, -1.00, optimal target: 0.5656
changing /IntronModel/minwindowcount to 1
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.00266
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 3 4 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
values  1	2	4	6	8
targets 0.5656	0.5652	0.5655	0.5656	0.5652
/IntronModel/minwindowcount: checking values 2
retrieve accuracy from previous computation
values  2
targets 0.5652
improving parameter /IntronModel/asspseudocount curently set to 0.00266
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
found improvement: 0.8599, 0.6086, 0.5521, 0.5722, 0.1123, 0.0674, -1.00, -1.00, optimal target: 0.5657
changing /IntronModel/asspseudocount to 0.007875
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.0005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 3 4 6 8 5 1 
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.5656	0.5657	0.5653	0.5651	0.5651
/IntronModel/asspseudocount: checking values 0.0005	0.0041875	0.007875	0.0115625	0.01525
retrieve accuracy from previous computation
bucket 7 2 4 6 3 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 6 3 8 4 5 1 
retrieve accuracy from previous computation
values  0.0005	0.0041875	0.007875	0.0115625	0.01525
targets 0.5656	0.5657	0.5657	0.5657	0.5653
improving parameter /IntronModel/dsspseudocount curently set to 0.0005
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 3 4 6 8 5 1 
found improvement: 0.8599, 0.6085, 0.5524, 0.5729, 0.1123, 0.0674, -1.00, -1.00, optimal target: 0.5659
changing /IntronModel/dsspseudocount to 0.03005
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.03005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	233.3
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 6 3 4 8 5 1 
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.5657	0.5657	0.5657	0.5659	0.5659
/IntronModel/dsspseudocount: checking values 0.0201	0.025075	0.03005	0.035025	0.04
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
values  0.0201	0.025075	0.03005	0.035025	0.04
targets 0.5657	0.5658	0.5659	0.5659	0.5659
improving parameter /IntronModel/dssneighborfactor curently set to 0.00173
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.5644	0.5654	0.5657	0.5656	0.5656
improving parameter /ExonModel/minPatSum curently set to 233.3
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 4 3 6 8 5 1 
found improvement: 0.8595, 0.6098, 0.5528, 0.5744, 0.1123, 0.0679, -1.00, -1.00, optimal target: 0.5664
changing /ExonModel/minPatSum to 225
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.03005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	225
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 8 6 5 1 
values  100	225	350	475	600
targets 0.5657	0.5664	0.5654	0.5640	0.5619
/ExonModel/minPatSum: checking values 100	162.5	225	287.5	350
retrieve accuracy from previous computation
bucket 7 2 4 3 6 8 5 1 
found improvement: 0.8598, 0.6085, 0.5539, 0.5747, 0.1141, 0.0689, -1.00, -1.00, optimal target: 0.5668
changing /ExonModel/minPatSum to 162.5
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.03005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	162.5
/Constant/probNinCoding	0.23
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
retrieve accuracy from previous computation
bucket 7 2 6 4 3 8 5 1 
retrieve accuracy from previous computation
values  100	162.5	225	287.5	350
targets 0.5657	0.5668	0.5664	0.5650	0.5654
/ExonModel/minPatSum: checking values 100	131.25	162.5	193.75	225
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
values  100	131.25	162.5	193.75	225
targets 0.5657	0.5656	0.5668	0.5659	0.5664
improving parameter /Constant/probNinCoding curently set to 0.23
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
bucket 7 2 3 4 6 8 5 1 
found improvement: 0.8601, 0.6144, 0.5539, 0.5774, 0.1176, 0.0722, -1.00, -1.00, optimal target: 0.5690
changing /Constant/probNinCoding to 0.15
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.03005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	162.5
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	1
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 6 4 3 8 5 1 
values  0.15	0.175	0.2	0.225	0.25
targets 0.5690	0.5687	0.5683	0.5668	0.5657
/Constant/probNinCoding: checking values 0.15	0.15625	0.1625	0.16875	0.175
retrieve accuracy from previous computation
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 6 4 8 5 1 
retrieve accuracy from previous computation
values  0.15	0.15625	0.1625	0.16875	0.175
targets 0.5690	0.5689	0.5688	0.5687	0.5687
improving parameter /Constant/decomp_num_steps curently set to 1
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
retrieve accuracy from previous computation
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 8 6 5 1 
found improvement: 0.8591, 0.6186, 0.5542, 0.5805, 0.1107, 0.0684, -1.00, -1.00, optimal target: 0.5691
changing /Constant/decomp_num_steps to 3
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	4
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.03005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	162.5
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	3
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 5 8 1 
values  1	2	3	4	5
targets 0.5690	0.5682	0.5691	0.5670	0.5660
/Constant/decomp_num_steps: checking values 3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  3	4
targets 0.5691	0.5670
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 4 3 8 6 5 1 
bucket 7 2 6 3 4 8 5 1 
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5262	0.5394	0.5611	0.5691
improving parameter /Constant/dss_start curently set to 1
1-3
/Constant/dss_start: checking values 1	2	3
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
values  1	2	3
targets 0.5691	0.5667	0.5606
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
retrieve accuracy from previous computation
values  1	2	3
targets 0.5652	0.5668	0.5691
improving parameter /Constant/ass_end curently set to 1
0-4
/Constant/ass_end: checking values 0	1	2	3	4
bucket 7 2 4 6 3 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 5 8 1 
values  0	1	2	3	4
targets 0.5656	0.5691	0.5664	0.5563	0.5391
improving parameter /Constant/ass_upwindow_size curently set to 30
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
bucket 7 2 4 3 8 6 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 6 4 5 8 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 6 3 4 8 5 1 
values  1	13	25	37	50
targets 0.5380	0.5612	0.5681	0.5678	0.5663
improving parameter /IntronModel/d curently set to 950
100-950
/IntronModel/d: checking values 100	312	525	737	950
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 6 4 3 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 5 8 1 
retrieve accuracy from previous computation
values  100	312	525	737	950
targets 0.5646	0.5634	0.5652	0.5661	0.5691
improving parameter /IntronModel/ass_motif_memory curently set to 2
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 4 3 6 5 8 1 
retrieve accuracy from previous computation
bucket 7 2 3 4 6 5 8 1 
values  0	1	2	3
targets 0.5533	0.5672	0.5691	0.5652
improving parameter /IntronModel/ass_motif_radius curently set to 4
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
bucket 7 2 3 4 5 8 6 1 
found improvement: 0.8580, 0.6182, 0.5540, 0.5797, 0.1160, 0.0714, -1.00, -1.00, optimal target: 0.5695
changing /IntronModel/ass_motif_radius to 0
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	0
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.03005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	162.5
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	3
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 3 4 6 8 5 1 
found improvement: 0.8586, 0.6192, 0.5525, 0.5795, 0.1177, 0.0734, -1.00, -1.00, optimal target: 0.5697
changing /IntronModel/ass_motif_radius to 1
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	1
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	3.875
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.03005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	162.5
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	3
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 6 3 4 5 8 1 
bucket 7 2 3 4 6 5 8 1 
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5695	0.5697	0.5690	0.5695	0.5691
/IntronModel/ass_motif_radius: checking values 1	2
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2
targets 0.5697	0.5690
improving parameter /ExonModel/tis_motif_memory curently set to 1
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
bucket 7 2 6 3 4 5 8 1 
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 5 8 1 
values  0	1	2	3
targets 0.5640	0.5697	0.5661	0.5550
improving parameter /ExonModel/tis_motif_radius curently set to 0
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
retrieve accuracy from previous computation
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 4 8 3 6 5 1 
bucket 7 2 3 4 6 8 5 1 
values  0	1	2	3
targets 0.5697	0.5680	0.5657	0.5659
improving parameter /Constant/trans_init_window curently set to 25
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 8 6 5 1 
bucket 7 2 4 3 5 8 6 1 
retrieve accuracy from previous computation
values  0	6	12	18	25
targets 0.5619	0.5667	0.5678	0.5682	0.5697
improving parameter /Constant/init_coding_len curently set to 0
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
values  0	4	9	13	18
targets 0.5697	0.5668	0.5672	0.5659	0.5648
improving parameter /ExonModel/patpseudocount curently set to 3.875
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
bucket 7 2 3 4 8 6 5 1 
found improvement: 0.8587, 0.6186, 0.5521, 0.5775, 0.1247, 0.0776, -1.00, -1.00, optimal target: 0.5703
changing /ExonModel/patpseudocount to 0.5
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	1
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	0.5
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.03005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	162.5
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	3
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 4 3 6 8 5 1 
found improvement: 0.8596, 0.6192, 0.5539, 0.5793, 0.1247, 0.0779, -1.00, -1.00, optimal target: 0.5713
changing /ExonModel/patpseudocount to 1.625
/Constant/dss_end	4
/Constant/dss_start	1
/Constant/ass_start	3
/Constant/ass_end	1
/Constant/ass_upwindow_size	30
/IntronModel/d	950
/IntronModel/ass_motif_memory	2
/IntronModel/ass_motif_radius	1
/ExonModel/tis_motif_memory	1
/ExonModel/tis_motif_radius	0
/Constant/trans_init_window	25
/Constant/init_coding_len	0
/ExonModel/patpseudocount	1.625
/ExonModel/etpseudocount	3
/ExonModel/etorder	2
/Constant/intterm_coding_len	5
/ExonModel/slope_of_bandwidth	0.3
/ExonModel/minwindowcount	11
/IGenicModel/patpseudocount	5.0
/IntronModel/patpseudocount	5.0
/IntronModel/slope_of_bandwidth	0.05
/IntronModel/minwindowcount	1
/IntronModel/asspseudocount	0.007875
/IntronModel/dsspseudocount	0.03005
/IntronModel/dssneighborfactor	0.00173
/ExonModel/minPatSum	162.5
/Constant/probNinCoding	0.15
/Constant/decomp_num_steps	3
Writing new parameters to /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_parameters.cfg...
bucket 7 2 3 4 8 6 5 1 
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
values  0.5	1.625	2.75	3.875	5
targets 0.5703	0.5713	0.5709	0.5697	0.5699
/ExonModel/patpseudocount: checking values 0.5	1.0625	1.625	2.1875	2.75
retrieve accuracy from previous computation
bucket 7 2 6 4 8 3 5 1 
retrieve accuracy from previous computation
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
values  0.5	1.0625	1.625	2.1875	2.75
targets 0.5703	0.5706	0.5713	0.5711	0.5709
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 6 3 5 8 1 
bucket 7 2 4 6 3 8 5 1 
values  0	2	5	7	10
targets 0.5713	0.5713	0.5713	0.5713	0.5713
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
values  0	1	2	3
targets 0.5713	0.5713	0.5713	0.5713
improving parameter /Constant/intterm_coding_len curently set to 5
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
bucket 7 2 3 6 4 5 8 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 6 4 3 8 5 1 
bucket 7 2 6 4 3 8 5 1 
values  0	3	6	9	13
targets 0.5677	0.5676	0.5657	0.5659	0.5640
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.3
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 8 6 5 1 
bucket 7 2 3 8 4 6 5 1 
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 3 4 5 6 8 1 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5713	0.5712	0.5710	0.5695	0.5698
improving parameter /ExonModel/minwindowcount curently set to 11
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 3 6 4 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 4 3 6 5 8 1 
values  1	4	8	11	15
targets 0.5680	0.5705	0.5706	0.5713	0.5705
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 7 2 3 4 5 6 8 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 5 8 1 
values  0.5	2.125	3.75	5.375	7
targets 0.5713	0.5713	0.5713	0.5713	0.5713
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 5 8 1 
values  0.5	2.125	3.75	5.375	7
targets 0.5708	0.5709	0.5709	0.5711	0.5711
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.05
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5713	0.5700	0.5699	0.5699	0.5700
improving parameter /IntronModel/minwindowcount curently set to 1
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
retrieve accuracy from previous computation
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 4 3 5 6 8 1 
bucket 7 2 3 4 6 8 5 1 
values  1	2	4	6	8
targets 0.5713	0.5710	0.5703	0.5702	0.5709
improving parameter /IntronModel/asspseudocount curently set to 0.007875
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
bucket 7 2 4 3 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 5 8 1 
bucket 7 2 6 3 4 8 5 1 
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.5713	0.5713	0.5712	0.5712	0.5712
improving parameter /IntronModel/dsspseudocount curently set to 0.03005
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
bucket 7 2 4 3 6 5 8 1 
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 4 6 3 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 3 6 4 8 5 1 
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.5712	0.5712	0.5713	0.5713	0.5707
improving parameter /IntronModel/dssneighborfactor curently set to 0.00173
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
bucket 7 2 4 3 6 5 8 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 3 4 5 8 6 1 
bucket 7 2 3 4 6 5 8 1 
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.5702	0.5706	0.5699	0.5695	0.5696
improving parameter /ExonModel/minPatSum curently set to 162.5
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 3 6 4 5 8 1 
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
values  100	225	350	475	600
targets 0.5690	0.5705	0.5708	0.5711	0.5700
improving parameter /Constant/probNinCoding curently set to 0.15
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 3 4 6 8 5 1 
values  0.15	0.175	0.2	0.225	0.25
targets 0.5713	0.5709	0.5704	0.5690	0.5673
improving parameter /Constant/decomp_num_steps curently set to 3
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 3 6 5 8 1 
retrieve accuracy from previous computation
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 3 4 6 8 1 5 
values  1	2	3	4	5
targets 0.5682	0.5702	0.5713	0.5693	0.5681
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 3 4 6 5 8 1 
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5265	0.5398	0.5611	0.5713
improving parameter /Constant/dss_start curently set to 1
1-3
/Constant/dss_start: checking values 1	2	3
retrieve accuracy from previous computation
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 3 4 6 5 8 1 
values  1	2	3
targets 0.5713	0.5680	0.5602
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
bucket 7 2 3 4 8 6 5 1 
bucket 7 2 3 4 6 8 5 1 
retrieve accuracy from previous computation
values  1	2	3
targets 0.5682	0.5692	0.5713
improving parameter /Constant/ass_end curently set to 1
0-4
/Constant/ass_end: checking values 0	1	2	3	4
bucket 7 2 3 4 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 4 3 8 5 6 1 
bucket 7 2 6 3 4 5 8 1 
values  0	1	2	3	4
targets 0.5656	0.5713	0.5673	0.5547	0.5398
improving parameter /Constant/ass_upwindow_size curently set to 30
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 3 4 8 6 5 1 
values  1	13	25	37	50
targets 0.5383	0.5624	0.5700	0.5685	0.5679
improving parameter /IntronModel/d curently set to 950
100-950
/IntronModel/d: checking values 100	312	525	737	950
bucket 7 2 6 3 4 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 6 4 8 5 1 
retrieve accuracy from previous computation
values  100	312	525	737	950
targets 0.5649	0.5639	0.5666	0.5665	0.5713
improving parameter /IntronModel/ass_motif_memory curently set to 2
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 3 4 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 3 4 6 5 8 1 
values  0	1	2	3
targets 0.5560	0.5670	0.5713	0.5670
improving parameter /IntronModel/ass_motif_radius curently set to 1
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
bucket 7 2 3 4 6 8 5 1 
retrieve accuracy from previous computation
bucket 7 2 6 4 3 5 8 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 3 4 8 6 5 1 
values  0	1	2	3	4
targets 0.5707	0.5713	0.5699	0.5703	0.5703
improving parameter /ExonModel/tis_motif_memory curently set to 1
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
bucket 7 2 3 4 5 6 8 1 
retrieve accuracy from previous computation
bucket 7 2 4 3 6 8 5 1 
bucket 7 2 6 3 4 8 5 1 
values  0	1	2	3
targets 0.5647	0.5713	0.5666	0.5549
improving parameter /ExonModel/tis_motif_radius curently set to 0
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
retrieve accuracy from previous computation
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 6 3 5 8 1 
bucket 7 2 3 4 6 8 5 1 
values  0	1	2	3
targets 0.5713	0.5683	0.5658	0.5658
improving parameter /Constant/trans_init_window curently set to 25
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
bucket 7 2 3 4 6 5 8 1 
bucket 7 2 3 6 4 8 5 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 3 4 6 5 8 1 
retrieve accuracy from previous computation
values  0	6	12	18	25
targets 0.5623	0.5671	0.5676	0.5683	0.5713
improving parameter /Constant/init_coding_len curently set to 0
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
retrieve accuracy from previous computation
bucket 7 2 3 4 5 6 8 1 
bucket 7 2 3 4 6 8 5 1 
bucket 7 2 4 6 3 8 5 1 
bucket 7 2 4 3 6 5 8 1 
values  0	4	9	13	18
targets 0.5713	0.5674	0.5672	0.5663	0.5659
improving parameter /ExonModel/patpseudocount curently set to 1.625
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	1.625	2.75	3.875	5
targets 0.5703	0.5713	0.5709	0.5697	0.5699
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	2	5	7	10
targets 0.5713	0.5713	0.5713	0.5713	0.5713
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5713	0.5713	0.5713	0.5713
improving parameter /Constant/intterm_coding_len curently set to 5
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	3	6	9	13
targets 0.5677	0.5676	0.5657	0.5659	0.5640
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.3
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5713	0.5712	0.5710	0.5695	0.5698
improving parameter /ExonModel/minwindowcount curently set to 11
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	4	8	11	15
targets 0.5680	0.5705	0.5706	0.5713	0.5705
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.5713	0.5713	0.5713	0.5713	0.5713
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.5708	0.5709	0.5709	0.5711	0.5711
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.05
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5713	0.5700	0.5699	0.5699	0.5700
improving parameter /IntronModel/minwindowcount curently set to 1
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	4	6	8
targets 0.5713	0.5710	0.5703	0.5702	0.5709
improving parameter /IntronModel/asspseudocount curently set to 0.007875
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.5713	0.5713	0.5712	0.5712	0.5712
improving parameter /IntronModel/dsspseudocount curently set to 0.03005
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.5712	0.5712	0.5713	0.5713	0.5707
improving parameter /IntronModel/dssneighborfactor curently set to 0.00173
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.5702	0.5706	0.5699	0.5695	0.5696
improving parameter /ExonModel/minPatSum curently set to 162.5
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  100	225	350	475	600
targets 0.5690	0.5705	0.5708	0.5711	0.5700
improving parameter /Constant/probNinCoding curently set to 0.15
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.15	0.175	0.2	0.225	0.25
targets 0.5713	0.5709	0.5704	0.5690	0.5673
improving parameter /Constant/decomp_num_steps curently set to 3
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3	4	5
targets 0.5682	0.5702	0.5713	0.5693	0.5681
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5265	0.5398	0.5611	0.5713
improving parameter /Constant/dss_start curently set to 1
1-3
/Constant/dss_start: checking values 1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3
targets 0.5713	0.5680	0.5602
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3
targets 0.5682	0.5692	0.5713
improving parameter /Constant/ass_end curently set to 1
0-4
/Constant/ass_end: checking values 0	1	2	3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5656	0.5713	0.5673	0.5547	0.5398
improving parameter /Constant/ass_upwindow_size curently set to 30
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	13	25	37	50
targets 0.5383	0.5624	0.5700	0.5685	0.5679
improving parameter /IntronModel/d curently set to 950
100-950
/IntronModel/d: checking values 100	312	525	737	950
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  100	312	525	737	950
targets 0.5649	0.5639	0.5666	0.5665	0.5713
improving parameter /IntronModel/ass_motif_memory curently set to 2
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5560	0.5670	0.5713	0.5670
improving parameter /IntronModel/ass_motif_radius curently set to 1
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5707	0.5713	0.5699	0.5703	0.5703
improving parameter /ExonModel/tis_motif_memory curently set to 1
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5647	0.5713	0.5666	0.5549
improving parameter /ExonModel/tis_motif_radius curently set to 0
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5713	0.5683	0.5658	0.5658
improving parameter /Constant/trans_init_window curently set to 25
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	6	12	18	25
targets 0.5623	0.5671	0.5676	0.5683	0.5713
improving parameter /Constant/init_coding_len curently set to 0
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	4	9	13	18
targets 0.5713	0.5674	0.5672	0.5663	0.5659
improving parameter /ExonModel/patpseudocount curently set to 1.625
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	1.625	2.75	3.875	5
targets 0.5703	0.5713	0.5709	0.5697	0.5699
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	2	5	7	10
targets 0.5713	0.5713	0.5713	0.5713	0.5713
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5713	0.5713	0.5713	0.5713
improving parameter /Constant/intterm_coding_len curently set to 5
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	3	6	9	13
targets 0.5677	0.5676	0.5657	0.5659	0.5640
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.3
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5713	0.5712	0.5710	0.5695	0.5698
improving parameter /ExonModel/minwindowcount curently set to 11
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	4	8	11	15
targets 0.5680	0.5705	0.5706	0.5713	0.5705
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.5713	0.5713	0.5713	0.5713	0.5713
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.5708	0.5709	0.5709	0.5711	0.5711
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.05
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5713	0.5700	0.5699	0.5699	0.5700
improving parameter /IntronModel/minwindowcount curently set to 1
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	4	6	8
targets 0.5713	0.5710	0.5703	0.5702	0.5709
improving parameter /IntronModel/asspseudocount curently set to 0.007875
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.5713	0.5713	0.5712	0.5712	0.5712
improving parameter /IntronModel/dsspseudocount curently set to 0.03005
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.5712	0.5712	0.5713	0.5713	0.5707
improving parameter /IntronModel/dssneighborfactor curently set to 0.00173
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.5702	0.5706	0.5699	0.5695	0.5696
improving parameter /ExonModel/minPatSum curently set to 162.5
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  100	225	350	475	600
targets 0.5690	0.5705	0.5708	0.5711	0.5700
improving parameter /Constant/probNinCoding curently set to 0.15
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.15	0.175	0.2	0.225	0.25
targets 0.5713	0.5709	0.5704	0.5690	0.5673
improving parameter /Constant/decomp_num_steps curently set to 3
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3	4	5
targets 0.5682	0.5702	0.5713	0.5693	0.5681
improving parameter /Constant/dss_end curently set to 4
1-4
/Constant/dss_end: checking values 1	2	3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3	4
targets 0.5265	0.5398	0.5611	0.5713
improving parameter /Constant/dss_start curently set to 1
1-3
/Constant/dss_start: checking values 1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3
targets 0.5713	0.5680	0.5602
improving parameter /Constant/ass_start curently set to 3
1-3
/Constant/ass_start: checking values 1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3
targets 0.5682	0.5692	0.5713
improving parameter /Constant/ass_end curently set to 1
0-4
/Constant/ass_end: checking values 0	1	2	3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5656	0.5713	0.5673	0.5547	0.5398
improving parameter /Constant/ass_upwindow_size curently set to 30
1-50
/Constant/ass_upwindow_size: checking values 1	13	25	37	50
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	13	25	37	50
targets 0.5383	0.5624	0.5700	0.5685	0.5679
improving parameter /IntronModel/d curently set to 950
100-950
/IntronModel/d: checking values 100	312	525	737	950
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  100	312	525	737	950
targets 0.5649	0.5639	0.5666	0.5665	0.5713
improving parameter /IntronModel/ass_motif_memory curently set to 2
0-3
/IntronModel/ass_motif_memory: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5560	0.5670	0.5713	0.5670
improving parameter /IntronModel/ass_motif_radius curently set to 1
0-4
/IntronModel/ass_motif_radius: checking values 0	1	2	3	4
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3	4
targets 0.5707	0.5713	0.5699	0.5703	0.5703
improving parameter /ExonModel/tis_motif_memory curently set to 1
0-3
/ExonModel/tis_motif_memory: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5647	0.5713	0.5666	0.5549
improving parameter /ExonModel/tis_motif_radius curently set to 0
0-3
/ExonModel/tis_motif_radius: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5713	0.5683	0.5658	0.5658
improving parameter /Constant/trans_init_window curently set to 25
0-25
/Constant/trans_init_window: checking values 0	6	12	18	25
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	6	12	18	25
targets 0.5623	0.5671	0.5676	0.5683	0.5713
improving parameter /Constant/init_coding_len curently set to 0
0-18
/Constant/init_coding_len: checking values 0	4	9	13	18
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	4	9	13	18
targets 0.5713	0.5674	0.5672	0.5663	0.5659
improving parameter /ExonModel/patpseudocount curently set to 1.625
0.5-5
/ExonModel/patpseudocount: checking values 0.5	1.625	2.75	3.875	5
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	1.625	2.75	3.875	5
targets 0.5703	0.5713	0.5709	0.5697	0.5699
improving parameter /ExonModel/etpseudocount curently set to 3
0-10
/ExonModel/etpseudocount: checking values 0	2	5	7	10
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	2	5	7	10
targets 0.5713	0.5713	0.5713	0.5713	0.5713
improving parameter /ExonModel/etorder curently set to 2
0-3
/ExonModel/etorder: checking values 0	1	2	3
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	1	2	3
targets 0.5713	0.5713	0.5713	0.5713
improving parameter /Constant/intterm_coding_len curently set to 5
0-13
/Constant/intterm_coding_len: checking values 0	3	6	9	13
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0	3	6	9	13
targets 0.5677	0.5676	0.5657	0.5659	0.5640
improving parameter /ExonModel/slope_of_bandwidth curently set to 0.3
0.05-0.6
/ExonModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5713	0.5712	0.5710	0.5695	0.5698
improving parameter /ExonModel/minwindowcount curently set to 11
1-15
/ExonModel/minwindowcount: checking values 1	4	8	11	15
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	4	8	11	15
targets 0.5680	0.5705	0.5706	0.5713	0.5705
improving parameter /IGenicModel/patpseudocount curently set to 5.0
0.5-7
/IGenicModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.5713	0.5713	0.5713	0.5713	0.5713
improving parameter /IntronModel/patpseudocount curently set to 5.0
0.5-7
/IntronModel/patpseudocount: checking values 0.5	2.125	3.75	5.375	7
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.5	2.125	3.75	5.375	7
targets 0.5708	0.5709	0.5709	0.5711	0.5711
improving parameter /IntronModel/slope_of_bandwidth curently set to 0.05
0.05-0.6
/IntronModel/slope_of_bandwidth: checking values 0.05	0.1875	0.325	0.4625	0.6
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.05	0.1875	0.325	0.4625	0.6
targets 0.5713	0.5700	0.5699	0.5699	0.5700
improving parameter /IntronModel/minwindowcount curently set to 1
1-8
/IntronModel/minwindowcount: checking values 1	2	4	6	8
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	4	6	8
targets 0.5713	0.5710	0.5703	0.5702	0.5709
improving parameter /IntronModel/asspseudocount curently set to 0.007875
0.0005-0.03
/IntronModel/asspseudocount: checking values 0.0005	0.007875	0.01525	0.022625	0.03
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0005	0.007875	0.01525	0.022625	0.03
targets 0.5713	0.5713	0.5712	0.5712	0.5712
improving parameter /IntronModel/dsspseudocount curently set to 0.03005
0.0002-0.04
/IntronModel/dsspseudocount: checking values 0.0002	0.01015	0.0201	0.03005	0.04
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0002	0.01015	0.0201	0.03005	0.04
targets 0.5712	0.5712	0.5713	0.5713	0.5707
improving parameter /IntronModel/dssneighborfactor curently set to 0.00173
0.0001-0.01
/IntronModel/dssneighborfactor: checking values 0.0001	0.002575	0.00505	0.007525	0.01
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.0001	0.002575	0.00505	0.007525	0.01
targets 0.5702	0.5706	0.5699	0.5695	0.5696
improving parameter /ExonModel/minPatSum curently set to 162.5
100-600
/ExonModel/minPatSum: checking values 100	225	350	475	600
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  100	225	350	475	600
targets 0.5690	0.5705	0.5708	0.5711	0.5700
improving parameter /Constant/probNinCoding curently set to 0.15
0.15-.25
/Constant/probNinCoding: checking values 0.15	0.175	0.2	0.225	0.25
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  0.15	0.175	0.2	0.225	0.25
targets 0.5713	0.5709	0.5704	0.5690	0.5673
improving parameter /Constant/decomp_num_steps curently set to 3
1-5
/Constant/decomp_num_steps: checking values 1	2	3	4	5
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
retrieve accuracy from previous computation
values  1	2	3	4	5
targets 0.5682	0.5702	0.5713	0.5693	0.5681
Making final training with the optimized parameters.
etraining --species=BUSCO_Pgenerosa_v074_4076027899 --AUGUSTUS_CONFIG_PATH=/gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/ --/augustus/verbosity=0 --/ExonModel/verbosity=0 --/IGenicModel/verbosity=0 --/IntronModel/verbosity=0 --/UtrModel/verbosity=0 --/genbank/verbosity=0 tmp_opt_BUSCO_Pgenerosa_v074_4076027899/curtrain  
# Read in 578 genbank sequences.
Quantiles of the GC contents in the training set:
0%	0.311
5%	0.324	10%	0.328
15%	0.329	20%	0.331
25%	0.332	30%	0.333
35%	0.335	40%	0.336
45%	0.337	50%	0.338
55%	0.339	60%	0.341
65%	0.342	70%	0.343
75%	0.344	80%	0.346
85%	0.348	90%	0.35
95%	0.354	100%	0.396
I recommend to set /Constant/gc_range_min to 0.32 and /Constant/gc_range_max to 0.35
HMM-training the parameters...
i= 0 bc= (0.289, 0.211, 0.211, 0.289)
 ** building model for exons *EXON*
gene g1.t1 transcr. 1 in sequence PGA_scaffold11__79_contigs__length_51449921_37548411-37573503: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold14__91_contigs__length_45393038_43237612-43252661: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold8__63_contigs__length_61151155_23748705-23770734: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_17492393-17505227: Initial exon does not begin with start codon but with cta
gene g1.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_87419082-87426785: coding length not a multiple of 3. Skipping...
start codon frequencies: ATG(573)
# admissible start codons and their probabilities: ATG(1), CTG(0), TTG(0)
 number of bases in the reading frames: 1076170 1078840 1078910
--- frame = 0 ---    minPatSum = 162
--- frame = 1 ---    minPatSum = 162
--- frame = 2 ---    minPatSum = 162
--- initial frame = 0 ---    minPatSum = 162
--- initial frame = 1 ---    minPatSum = 162
--- initial frame = 2 ---    minPatSum = 162
--- internal exon terminal frame = 0 ---    minPatSum = 162
--- internal exon terminal frame = 1 ---    minPatSum = 162
--- internal exon terminal frame = 2 ---    minPatSum = 162
single, initial, internal, terminal mean exon lengths :
868	101	101	165
single exon : 7
initial exon 0 : 244
initial exon 1 : 187
initial exon 2 : 135
internal exon 0 : 2124
internal exon 1 : 1554
internal exon 2 : 1455
terminal exon : 567
Frequency of stop codons:
tag:  129 (0.225)
taa:  193 (0.336)
tga:  252 (0.439)
end *EXON*
i= 1 bc= (0.237, 0.263, 0.263, 0.237)
 ** building model for exons *EXON*
gene g1.t1 transcr. 1 in sequence PGA_scaffold11__79_contigs__length_51449921_37548411-37573503: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold14__91_contigs__length_45393038_43237612-43252661: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold8__63_contigs__length_61151155_23748705-23770734: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_17492393-17505227: Initial exon does not begin with start codon but with cta
gene g1.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_87419082-87426785: coding length not a multiple of 3. Skipping...
start codon frequencies: ATG(1146)
# admissible start codons and their probabilities: ATG(1), CTG(0), TTG(0)
 number of bases in the reading frames: 217584 218133 218146
--- frame = 0 ---    minPatSum = 162
--- frame = 1 ---    minPatSum = 162
--- frame = 2 ---    minPatSum = 162
--- initial frame = 0 ---    minPatSum = 162
--- initial frame = 1 ---    minPatSum = 162
--- initial frame = 2 ---    minPatSum = 162
--- internal exon terminal frame = 0 ---    minPatSum = 162
--- internal exon terminal frame = 1 ---    minPatSum = 162
--- internal exon terminal frame = 2 ---    minPatSum = 162
single exon : 7
initial exon 0 : 244
initial exon 1 : 187
initial exon 2 : 135
internal exon 0 : 2124
internal exon 1 : 1554
internal exon 2 : 1455
terminal exon : 567
Frequency of stop codons:
tag:  129 (0.225)
taa:  193 (0.336)
tga:  252 (0.439)
end *EXON*
i= 2 bc= (0.186, 0.314, 0.314, 0.186)
 ** building model for exons *EXON*
gene g1.t1 transcr. 1 in sequence PGA_scaffold11__79_contigs__length_51449921_37548411-37573503: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold14__91_contigs__length_45393038_43237612-43252661: coding length not a multiple of 3. Skipping...
gene g1.t1 transcr. 1 in sequence PGA_scaffold8__63_contigs__length_61151155_23748705-23770734: coding length not a multiple of 3. Skipping...
gene g2.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_17492393-17505227: Initial exon does not begin with start codon but with cta
gene g1.t1 transcr. 1 in sequence PGA_scaffold1__77_contigs__length_89643857_87419082-87426785: coding length not a multiple of 3. Skipping...
start codon frequencies: ATG(1719)
# admissible start codons and their probabilities: ATG(1), CTG(0), TTG(0)
 number of bases in the reading frames: 216316 216863 216876
--- frame = 0 ---    minPatSum = 162
--- frame = 1 ---    minPatSum = 162
--- frame = 2 ---    minPatSum = 162
--- initial frame = 0 ---    minPatSum = 162
--- initial frame = 1 ---    minPatSum = 162
--- initial frame = 2 ---    minPatSum = 162
--- internal exon terminal frame = 0 ---    minPatSum = 162
--- internal exon terminal frame = 1 ---    minPatSum = 162
--- internal exon terminal frame = 2 ---    minPatSum = 162
single exon : 7
initial exon 0 : 244
initial exon 1 : 187
initial exon 2 : 135
internal exon 0 : 2124
internal exon 1 : 1554
internal exon 2 : 1455
terminal exon : 567
Frequency of stop codons:
tag:  129 (0.225)
taa:  193 (0.336)
tga:  252 (0.439)
end *EXON*
Storing parameters to file...
Writing exon model parameters [1] to file /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_exon_probs.pbl.
Writing exon model parameters [2] to file /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_exon_probs.pbl.
Writing exon model parameters [3] to file /gscratch/scrubbed/samwhite/outputs/20190710_busco_pgen_v074_unannotated/augustus/config/species/BUSCO_Pgenerosa_v074_4076027899/BUSCO_Pgenerosa_v074_4076027899_exon_probs.pbl.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
examining piece 20695173..20734857 (39685 bp)
Warning: Block unknown_I is not significant enough, removed from profile.
examining piece 15905830..15946392 (40563 bp)
viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.examining piece 21864294..21904234 (39941 bp)
Warning: Block unknown_F is not significant enough, removed from profile.
viterbi algorithm progress:
[%]: examining piece 8007549..8045539 (37991 bp)
...examining piece 25114139..25151967 (37829 bp)
examining piece 34805457..34846591 (41135 bp)
..viterbi algorithm progress:
[%]: ...examining piece 30457170..30494983 (37814 bp)
...viterbi algorithm progress:
[%]: .Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
examining piece 1125318..1163146 (37829 bp)
examining piece 46125538..46172675 (47138 bp)
examining piece 21796528..21834473 (37946 bp)
.examining piece 6460624..6500698 (40075 bp)
examining piece 29520292..29565001 (44710 bp)
..viterbi algorithm progress:
[%]: .viterbi algorithm progress:
[%]: .....examining piece 5996107..6040644 (44538 bp)
..viterbi algorithm progress:
[%]: viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: .examining piece 55258536..55296676 (38141 bp)
...examining piece 39390937..39428726 (37790 bp)
.examining piece 36489666..36531377 (41712 bp)
viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: .examining piece 8223055..8305430 (82376 bp)
viterbi algorithm progress:
[%]: ..10.examining piece 34822972..34860779 (37808 bp)
..viterbi algorithm progress:
[%]: ..examining piece 20243393..20284521 (41129 bp)
.....viterbi algorithm progress:
[%]: .....examining piece 43262326..43322058 (59733 bp)
...examining piece 60654072..60699262 (45191 bp)
..10viterbi algorithm progress:
[%]: ......10..examining piece 218227..257741 (39515 bp)
..viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: .......examining piece 4224034..4270285 (46252 bp)
.examining piece 43699095..43741232 (42138 bp)
....viterbi algorithm progress:
[%]: ......10viterbi algorithm progress:
[%]: ...examining piece 64741526..64783241 (41716 bp)
..10......viterbi algorithm progress:
[%]: ......10...........viterbi algorithm progress:
[%]: .........viterbi algorithm progress:
[%]: ................10......10......10...examining piece 59102926..59156125 (53200 bp)
....10..examining piece 52117831..52155779 (37949 bp)
....examining piece 55340650..55379222 (38573 bp)
..viterbi algorithm progress:
[%]: ...10.viterbi algorithm progress:
[%]: ......viterbi algorithm progress:
[%]: 20.......10.viterbi algorithm progress:
[%]: .....20.10...........................202010..20.............................................................20.................10......30....10..........20..10...2020.10......10..........20..30...........10..........30...............2030..40................30.2020...20.......20...............................................10........30....20............40......30.30.....50..........20.......30...40.............................30.....10..40........................20.........20......30............30..5020..4030.60...40.40..................................................30................30.40...40....50..........20.....40.....50...50......30.....10.....50...........70...............50.....................50...........40......50....30..30...........40.30...........6080.60................6040.......60...60...............................60...................................20...50.....40...9040.60..........................20...........10.60......50.........7030............70.........7070.....40......30....50..50.70.............20..100.40............
.......40..........70..60..............30..40............................sampling algorithm progress:
[%]: ..50..80..........60....308050........10..........................80..40..50...10..................8060..70........................................80...20....50...................................90..70..5040.............30.70.....70....90......90.60.60...........80................................40..80...60...................60..60.100.....50.......
.30.............50........50.....90........90.....90................sampling algorithm progress:
[%]: 100.50.60........
........40701070................80................70.....100........100.
..10............80.....sampling algorithm progress:
[%]: ....
..sampling algorithm progress:
[%]: ....80........60..................80..........70.60.100......20......90........
.....10....................10.......70....sampling algorithm progress:
[%]: 100....
.................9030..........10090....20.................
.sampling algorithm progress:
[%]: ...70......20........10.70..60.............40..............30..............90.....100....706040.....
..308010.90..20.....50.sampling algorithm progress:
[%]: .80...................40.........sampling algorithm progress:
[%]: ...10..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.........................................40...60.......30.205010.......80........................70.............100............10.examining piece 33083335..33121184 (37850 bp)
.70.50............60...........
...20.....3040......................viterbi algorithm progress:
[%]: ......80...........8080.............70..60.....100...100.....30...20.............40.50.
.90.
.......90..80.90...sampling algorithm progress:
[%]: ...............80.................70.............40...............70.......100.50..........
..70..30...5060............90....10...........sampling algorithm progress:
[%]: ...............sampling algorithm progress:
[%]: 50......8060................................................100..60........
......70......10.70.......20.100.40.......60......10........90..
................8080............................70.20................................70.80.30..50.10090..2020.....
.100.................sampling algorithm progress:
[%]: ...............90.30.........
......80........100...........
80...90...............3040.90............sampling algorithm progress:
[%]: ..60.40...........10................8010...examining piece 25141348..25186269 (44922 bp)
.....90viterbi algorithm progress:
[%]: ...30....90.....examining piece 26849439..26909874 (60436 bp)
..................sampling algorithm progress:
[%]: ..5050.40.100..............
.............................viterbi algorithm progress:
[%]: ...........70..2080.100..100......10
examining piece 75774..113794 (38021 bp)
....
.viterbi algorithm progress:
[%]: ..........60....50.....10...10......60......................................10...............70.30......40..80.........20....60..100...90.....80.....70.......20.........................20.80...........
...Warning: Block unknown_F is not significant enough, removed from profile.
.20..........40..1030..70......90.....90...................80...examining piece 29956203..29994760 (38558 bp)
...90..........examining piece 19299631..19337462 (37832 bp)
...20.viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: ..................30...........40examining piece 44239343..44277144 (37802 bp)
........50.80.............30....30.100.....viterbi algorithm progress:
[%]: ....
.100....1090..1090...
............................sampling algorithm progress:
[%]: 50..50.............100..........90.............60........20......20..40.......100....
......
...4010........40.....60.....20..........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
..100..........
..30.........30.20....70....90.....90.20......................70..examining piece 30352051..30389912 (37862 bp)
......50...........60viterbi algorithm progress:
[%]: .......40..examining piece 17985903..18025994 (40092 bp)
..viterbi algorithm progress:
[%]: .........40.5030........80...50.........................80.....sampling algorithm progress:
[%]: .........Warning: Block unknown_G is not significant enough, removed from profile.
.10................................40......40.......50...1050....60.......90.........90......10....................50............60.......20100examining piece 64284700..64324714 (40015 bp)
...............30...................100.100100...examining piece 41380548..41421529 (40982 bp)
....60..viterbi algorithm progress:
[%]: .
..
20...viterbi algorithm progress:
[%]: ...60..
..2060....6070.................
.......10.............................30....50.70..30.............70....20.....70............................70......1010.........70....8030.8030......40.100....Warning: Block unknown_D is not significant enough, removed from profile.
........20..........
.Warning: Block unknown_D is not significant enough, removed from profile.
........................70.....40.20..90.sampling algorithm progress:
[%]: ..........sampling algorithm progress:
[%]: ...50........sampling algorithm progress:
[%]: ......100.........examining piece 24873422..24911235 (37814 bp)
......viterbi algorithm progress:
[%]: ...........80....30........examining piece 22053795..22091782 (37988 bp)
80....viterbi algorithm progress:
[%]: .100....406050..
..90......40...........80....10.30.60....1010.....90.........................
..............10.....60.............................20..............10.......209070.....................100...2080....70....
............90.50.................40.......20..30.30......Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
......80...........70......................80..40....30..............................100.....20....40..sampling algorithm progress:
[%]: .....
..50.90....................examining piece 36408255..36451290 (43036 bp)
...viterbi algorithm progress:
[%]: ...50.30......90......90.......100........4060......50...60........
.....sampling algorithm progress:
[%]: ...100..........
.....................examining piece 38069000..38108485 (39486 bp)
....viterbi algorithm progress:
[%]: .....70..........................100.101060..50sampling algorithm progress:
[%]: .50..
3080..............10.....40........8010............................20......sampling algorithm progress:
[%]: ...............70.................2090..100...20...60..................10.30......4070...10......Warning: Block unknown_B is not significant enough, removed from profile.
..Warning: Block unknown_H is not significant enough, removed from profile.

...90.......2040...100..80.....
.......40.......30.......40.......sampling algorithm progress:
[%]: .20...70....50.............20..................20..90....50.examining piece 33232912..33277152 (44241 bp)
.......viterbi algorithm progress:
[%]: ....sampling algorithm progress:
[%]: ...30...10....................30......50.....................................80....100..60......20..
...50.......100...10............4010.40.....10............3030..............70.30............90....................60..20.8050...9030...................50...40.....80...................................Warning: Block unknown_A is not significant enough, removed from profile.
..........60..40.60.50..30......6020............10090..........
...............................60....examining piece 35978622..36016420 (37799 bp)
.....60viterbi algorithm progress:
[%]: ..70......100.....40...
..40.
................50.........70.........40...............80....sampling algorithm progress:
[%]: .....3050.Warning: Block unknown_D is not significant enough, removed from profile.
....10...........100..80...70..70...............................70..examining piece 27328354..27434780 (106427 bp)
90...........60......9060.....30..................90..20.viterbi algorithm progress:
[%]: ............................100..50100..
..
....10.6050....50.......50....70............40.
.....Warning: Block unknown_B is not significant enough, removed from profile.
70..804030...100...............sampling algorithm progress:
[%]: ......80..........80............................
..............20...........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
..........Warning: Block unknown_F is not significant enough, removed from profile.
8050.40..90.............examining piece 8004943..8042765 (37823 bp)
...60....60.....viterbi algorithm progress:
[%]: ..80........90..........8010....................examining piece 26553846..26593485 (39640 bp)
90...viterbi algorithm progress:
[%]: .100........60
.100..10..........examining piece 53718325..53759353 (41029 bp)
.10.60..sampling algorithm progress:
[%]: .30......90.......50.............viterbi algorithm progress:
[%]: .........50.
..60................10......70............20....100...70.............20...
......70..........70.10010.........Warning: Block unknown_A is not significant enough, removed from profile.

..100..70......40......
........................sampling algorithm progress:
[%]: ..30803010...........20........90.60examining piece 41078971..41116868 (37898 bp)
................................30sampling algorithm progress:
[%]: ........20..80viterbi algorithm progress:
[%]: ........examining piece 31879459..31930157 (50699 bp)
....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..50...........401080............viterbi algorithm progress:
[%]: ............90.......10................60..............examining piece 15706301..15744099 (37799 bp)
..3010..viterbi algorithm progress:
[%]: ..................20..........20..........20...8070...20.10.40.........50....60.........90..............20..........................30..........10...............70.90.100................100..40100..
.........30...30...........40
....50...30.......80.......70....60........sampling algorithm progress:
[%]: .20..............10090..60....50...20.....7040.......
......40.................40.50...100...............
..60.sampling algorithm progress:
[%]: ................60.......80..
...............sampling algorithm progress:
[%]: ..40...50........10...90.70..............70....10...................50..........sampling algorithm progress:
[%]: .......................80............30...........60..206010....7090...............................100...90................50...20..80........10....
........30.30..80......80.....100........
....100Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
70......20.........100...
............
...80...40...................7020........sampling algorithm progress:
[%]: ..........30..40....80.....50.60.....30...sampling algorithm progress:
[%]: .Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
.Warning: Block unknown_Q is not significant enough, removed from profile.
......examining piece 40290835..40328618 (37784 bp)
...viterbi algorithm progress:
[%]: ...90.............................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_J is not significant enough, removed from profile.
................90..10......30.60...6010.......examining piece 32814842..32861398 (46557 bp)
.......10..90...........viterbi algorithm progress:
[%]: ................40....examining piece 20905831..20943722 (37892 bp)
.....40..........80..20..........70..........2070.....90........viterbi algorithm progress:
[%]: ...........40100....100..........
......30..
.....20...........5050.80.........10..........................3050...40.70....................50................90................20.....50.......60.30...80..........90....40...............100........
...60.examining piece 14134275..14179418 (45144 bp)
...........60.........60........viterbi algorithm progress:
[%]: ..30...40...............5070.70..90.......examining piece 16754283..16794279 (39997 bp)
.40.........60........100..viterbi algorithm progress:
[%]: ..................80..9070.....40....................
....Warning: Block unknown_B is not significant enough, removed from profile.
.....60...........8070..........90...10010.70......................
.5030................examining piece 4529499..4580785 (51287 bp)
..80.100viterbi algorithm progress:
[%]: ....50
.....70.......100.............90..
.....sampling algorithm progress:
[%]: .20...sampling algorithm progress:
[%]: ............80.........70..........80....90............................100..100..1080...
10..60.......30..................90Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
...100...90.100........
90......20..............2040....30....
....
.Warning: Block unknown_K is not significant enough, removed from profile.
..10010..60..40.
..............examining piece 55237328..55298135 (60808 bp)
examining piece 46634401..46680919 (46519 bp)
......5030.......viterbi algorithm progress:
[%]: ...70......examining piece 1533422..1595123 (61702 bp)
.....40..viterbi algorithm progress:
[%]: ...sampling algorithm progress:
[%]: ..100.30...........
.10............viterbi algorithm progress:
[%]: ....80........20....40Warning: Block unknown_F is not significant enough, removed from profile.
...50........50...............60.10....50......sampling algorithm progress:
[%]: Warning: Block unknown_C is not significant enough, removed from profile.
........40......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
................50............10........80.......examining piece 25931983..25970039 (38057 bp)
...examining piece 18031656..18069484 (37829 bp)
..viterbi algorithm progress:
[%]: ........1020.......30..60....10.examining piece 49779638..49827676 (48039 bp)
.....viterbi algorithm progress:
[%]: ..5070.viterbi algorithm progress:
[%]: .................60...............60...........10......................30.....................2010...70......60....1070................20...............70...20..........90...40.....4020.........30.....90..........80.....70..............70......................50....30..........................40.........90............20...80.......70...................30.....60..........20.......5040.80100..5050.100....
20...............30.
..............90....................3070...................6050...............................30.sampling algorithm progress:
[%]: ....100..........
..60.90.40.....80...............Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
.......70...10060....10.......60.............................
50.......90.......20.....40..examining piece 13784710..13822526 (37817 bp)
...90..8060...........................viterbi algorithm progress:
[%]: .40...........30...40100.......60
.........70...........90..examining piece 13925552..13970703 (45152 bp)
3010viterbi algorithm progress:
[%]: ............40.......100.70.sampling algorithm progress:
[%]: ..........................80........40.........
....5070...100...10....
....10..............10........20....60.50.80....80.........sampling algorithm progress:
[%]: ..........50....20..........Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
.2070...............70......80.............examining piece 8788546..8869489 (80944 bp)
.............examining piece 31283927..31331859 (47933 bp)
.....80.......viterbi algorithm progress:
[%]: ..80.30....30..........90....viterbi algorithm progress:
[%]: .........30......90..........10...................40............40........60....100......
..........90...80......10.40...............50...40..100...90......70..
....60...........20...10.............100.60......
....80.50.80.sampling algorithm progress:
[%]: .................................70...sampling algorithm progress:
[%]: .5070..10...............20....................30..........80.......20examining piece 65442309..65485208 (42900 bp)
..........80....10...90................viterbi algorithm progress:
[%]: .....20......60.....30..100.60....100...........90......90..
.........20.........40..40.....10.....................100......
..70...5090.............sampling algorithm progress:
[%]: ....30.100..80...30.100..70.
..60....................sampling algorithm progress:
[%]: 50....
........20...70....40.................................80......3010................50.....10.20....
...examining piece 18648537..18687022 (38486 bp)
..90..80......60...............50.viterbi algorithm progress:
[%]: ...............sampling algorithm progress:
[%]: .100...
....60.....90.............10050.....20.........20.......sampling algorithm progress:
[%]: ......70.
..4070...70.....100.......................examining piece 19188709..19227152 (38444 bp)
....viterbi algorithm progress:
[%]: ......30.10.60......80.......................30..
.............sampling algorithm progress:
[%]: 1090.30....80..80...sampling algorithm progress:
[%]: .............90...........40....10...100...............20...................90..
20......10.100......
...........10....70..40.50...90...............sampling algorithm progress:
[%]: ..........30......100....20..............................
........20...20....30.60Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
......4010...9050.100...........30
............sampling algorithm progress:
[%]: ................................examining piece 5319085..5356955 (37871 bp)
........80.50...30....7020.................30.viterbi algorithm progress:
[%]: ...40.10....................40........60....................30......................6030..20..50.802040.....10...............examining piece 474594..516643 (42050 bp)
.....viterbi algorithm progress:
[%]: .......................................................10..5030.70..40...60...80..40.....50....90....9070.............10........................40................4020.......40.....50.......20....70...................60...100...........
.60......80..........60......50..80..........50......30....60......80...................30.....................50.......6070..90.................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
...60..30..70........90....90...............70...............90.........70........40.....examining piece 14762788..14804406 (41619 bp)
100........80..70.......10080....viterbi algorithm progress:
[%]: ..
.........
.....................80100........60100....10.....
.
........80...909080...sampling algorithm progress:
[%]: ........4050.90...40......sampling algorithm progress:
[%]: ...........................Warning: Block unknown_L is not significant enough, removed from profile.
................100.........
....100100...70......

Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.50..10.9090....70...examining piece 46859770..46898072 (38303 bp)
.10..........viterbi algorithm progress:
[%]: .....60.80........examining piece 25058377..25099623 (41247 bp)
...viterbi algorithm progress:
[%]: ..........Warning: Block unknown_G is not significant enough, removed from profile.
..50...Warning: Block unknown_S is not significant enough, removed from profile.
......Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
..50..........10.....20..100.....80....1020..100
.examining piece 29505709..29543564 (37856 bp)
examining piece 2810911..2848787 (37877 bp)
..viterbi algorithm progress:
[%]: ...
..90...........examining piece 47564555..47602476 (37922 bp)
.......viterbi algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: .....80.sampling algorithm progress:
[%]: ...........70...........20..................10.30..........10...30.........20..........10.........10...Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
....................50...100...............
....20...4050.......90..40examining piece 44504282..44569427 (65146 bp)
.80...viterbi algorithm progress:
[%]: ...sampling algorithm progress:
[%]: 20.........80..........20......20....30.......................................50....50..30..........10......100.........3010............100........30..
.....................40....90.....60....60....................30.........20..40..20....40.50..............40............Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
..60
......70....2070.........................sampling algorithm progress:
[%]: ..60.40.....100..examining piece 27109971..27156541 (46571 bp)
..60....50.30.......
30............40..viterbi algorithm progress:
[%]: .....90..10.80....80.........70......................10.....100.100..30.sampling algorithm progress:
[%]: ..........................1040...............109080.....90.....50.......50.............................20......20..........40...........50....90.50.....100.30........
...100........
...
..............60.40.....20..
...10030...20....
.....sampling algorithm progress:
[%]: ......50........sampling algorithm progress:
[%]: .....60......60......................60......10..Warning: Block unknown_G is not significant enough, removed from profile.
..70......................40.........70Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
..10...examining piece 31846872..31886378 (39507 bp)
...viterbi algorithm progress:
[%]: ........50..20..60.........examining piece 15467966..15512400 (44435 bp)
........70.viterbi algorithm progress:
[%]: ...80..10.............100.30.............................30..60...50...201020.90
......examining piece 2133581..2184661 (51081 bp)
.....viterbi algorithm progress:
[%]: ..........................70.....................100...
40....20..........80.30.........................30..............5060....10...30.....40....................................sampling algorithm progress:
[%]: ............60.........9050...40.....40.........................40.....70.....80...70..........examining piece 16259061..16345238 (86178 bp)
..60.60..........viterbi algorithm progress:
[%]: ................10..70...50........100......50..8020
.....70......80....70............80........................10......90....80..6040................70.20..............................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
100...70.
.60..90...90................70................examining piece 53417658..53499574 (81917 bp)
....50...30...90....30........100..........
30..100.20....viterbi algorithm progress:
[%]: ..
.7080...70sampling algorithm progress:
[%]: ..............................80.........10..........40.............80...........9020....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
.....80........10examining piece 34481544..34519417 (37874 bp)
......viterbi algorithm progress:
[%]: ...........8030...................40...examining piece 47875593..47913685 (38093 bp)
...50..10090..40.
.....viterbi algorithm progress:
[%]: ...............90...100......50...90................
..........60....90.90..Warning: Block unknown_E is not significant enough, removed from profile.
....2060.60......20.....7080..100.......
....examining piece 35126259..35164237 (37979 bp)
........viterbi algorithm progress:
[%]: ..80...........30.90..............sampling algorithm progress:
[%]: ...sampling algorithm progress:
[%]: .....90.....6070.10...........................60..........10100...
.......10................................20.......30.2010.....8060.....100...............30..........50...
30....90.........90........40.......examining piece 30947502..30985315 (37814 bp)
.......90.....30..40....viterbi algorithm progress:
[%]: ....50.......100.........50................50...
60.sampling algorithm progress:
[%]: ....................100.......20
......60.....70.................60.....sampling algorithm progress:
[%]: .80..........100..8070......................20..............
40..90.......80....9010....50......60............100...100examining piece 8193639..8231521 (37883 bp)
viterbi algorithm progress:
[%]: ...
..........70....4090....10......30....
..........10.............20.......50.....100..Warning: Block unknown_A is not significant enough, removed from profile.
...
...........20.sampling algorithm progress:
[%]: ...40.......examining piece 30474082..30516054 (41973 bp)
..50..80..................60viterbi algorithm progress:
[%]: .100....30............30..sampling algorithm progress:
[%]: ..........10......100..............................examining piece 27848172..27886096 (37925 bp)
.......20.........70...10..viterbi algorithm progress:
[%]: ...40..20.10.10.40.....
.90..........30................40........................70...
40.........8050........60.20..70..........50..............10......50......20..........sampling algorithm progress:
[%]: ..............................50....50..20....90.....3060...60.............30..............100.......60.......10....................60.
...............30.......4040..sampling algorithm progress:
[%]: .....70.........100......30..
.......20............................70..30.sampling algorithm progress:
[%]: 60...70...........40sampling algorithm progress:
[%]: ..50..5070........10.....................70..............30................80.........................50.....30.......60....10...6080.....20.10.......................80.40................60..........70...40....................................80...70.70...30...70.40........5090.20..20.1070...9040................................................................................40.......80.....60.9080....40.90.80...80..50.80.30...30...100...........50..
....................................50..100..................
..9070..........................40.......40..90.90...................60.......50..60...100sampling algorithm progress:
[%]: .70...80...100.60....Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
..
.
...........................50........50....10..................70.........sampling algorithm progress:
[%]: .....90...examining piece 27287659..27335612 (47954 bp)
......90100..80viterbi algorithm progress:
[%]: ..20..70............20
90.............................60.......Warning: Block unknown_G is not significant enough, removed from profile.
.6030100....80........100.....
.......70..sampling algorithm progress:
[%]: ....90...........10.............40.....10............examining piece 17900574..17938597 (38024 bp)
....viterbi algorithm progress:
[%]: ...............90....70.....80...50....70...7010..........60..................10.........80...........60.............100.100..........
.......
..20.80.80..20.....70...80....20....examining piece 14171922..14209799 (37878 bp)
..20.viterbi algorithm progress:
[%]: ............100....20......90.........10................80.............20.........sampling algorithm progress:
[%]: ......30..........90......60..............30..90..90.......30
...........
...........30...........40.........80...90.....10090....
40..........100.sampling algorithm progress:
[%]: .....1001050.sampling algorithm progress:
[%]: ..30...70
....................100.100.....
....
.....60
....40........50............40..........90.....Warning: Block unknown_C is not significant enough, removed from profile.
.70examining piece 71691539..71729394 (37856 bp)
.........10.........20................sampling algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: .....100..Warning: Block unknown_Q is not significant enough, removed from profile.
......5010..80.60.examining piece 23512564..23550437 (37874 bp)

.viterbi algorithm progress:
[%]: ...................................sampling algorithm progress:
[%]: ..................examining piece 42117922..42155843 (37922 bp)
40.50.viterbi algorithm progress:
[%]: ..10.10......Warning: Block unknown_Q is not significant enough, removed from profile.
2090....10....................30..........................2070...............................1070...100..........
60....3020......20......20.............80....sampling algorithm progress:
[%]: .............Warning: Block unknown_Q is not significant enough, removed from profile.
.examining piece 55779901..55817810 (37910 bp)
...viterbi algorithm progress:
[%]: ...304010.......80......40..60...80...................10............30.................50..............30...20..10...........20......100..............examining piece 6738332..6776256 (37925 bp)
...viterbi algorithm progress:
[%]: ..........90.........30.40......40.50.30.50.70.100..30............................40........20.....10..70...10030.......40..
.....20............30.100...50......sampling algorithm progress:
[%]: ..
...................50.
..60.......50....................6050.....................60.............60.40.................20..90......80.30....70.80.30....................40...10.
...........60.......80......70...100.70...............sampling algorithm progress:
[%]: .......................60.........90................50.................8030.
examining piece 30057794..30095802 (38009 bp)
........80.10040...sampling algorithm progress:
[%]: ..
....viterbi algorithm progress:
[%]: ...90...7020..60..40............5090......80.............................................90....10......................7010.............4060.....70...5080100.....30.100........100.sampling algorithm progress:
[%]: ....
.50.
....90...
................................................20.......50......20..............90...5080...examining piece 22126341..22166246 (39906 bp)
.40..viterbi algorithm progress:
[%]: ..60....100.....70......
..............Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
...........60Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
.60100..70......10..30......40.......................100.
...........
.....50...examining piece 335850..373723 (37874 bp)
...examining piece 24676222..24714401 (38180 bp)
viterbi algorithm progress:
[%]: .30.1020...viterbi algorithm progress:
[%]: ..............10...........examining piece 62007772..62045624 (37853 bp)
....50......90.........10....80.......viterbi algorithm progress:
[%]: .4010......60................sampling algorithm progress:
[%]: ......................70......20.2030.............................80...........60...10.70...30....10...70.....30........60.........50...40...........examining piece 68923363..68961536 (38174 bp)
.........viterbi algorithm progress:
[%]: ...............40examining piece 48107827..48157806 (49980 bp)
.40..................4020..................10090............90..20.80.....viterbi algorithm progress:
[%]: ..10.........
..40.....50...........50.80...70....50.....3020.70..........60..........20..........................................90.50........60...........70.......40...60.30.60....sampling algorithm progress:
[%]: ...........10...80........30.............100....80..................
..........50.70..80..70......10..............7040..................90........................................60...80.......20.70.......20.5060...............80.......80....80......40....80............30....70..30.........90....90......................60.......................90.......80.........100.40...80.....90..20...........
..90...............................9090.........7050..90.......30.50...examining piece 9628474..9672516 (44043 bp)
70...30....viterbi algorithm progress:
[%]: ...........10090..............100....
.50...............90...
..............40.....100............60..
.60.........90.10100.......
.....Warning: Block .unknown_C is not significant enough, removed from profile.
..100....sampling algorithm progress:
[%]: ..50....
...........8090.............sampling algorithm progress:
[%]: ..70......8040.....................examining piece 34487365..34525274 (37910 bp)
..100.viterbi algorithm progress:
[%]: ....6010.
70............2060.80.........Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
....Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
....8010.......................................70...sampling algorithm progress:
[%]: 20............40....10....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
..100....90....90..20Warning: Block unknown_H is not significant enough, removed from profile.
.Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
......................100....
80examining piece 15475635..15557140 (81506 bp)
....100.........viterbi algorithm progress:
[%]: ...30.10.....80...30..
.......100examining piece 14002221..14040094 (37874 bp)
...
..30.
..............100..........viterbi algorithm progress:
[%]: ................examining piece 4056838..4094690 (37853 bp)
..90...100.40..20..90...viterbi algorithm progress:
[%]: ..50...70...
.......40.20........................sampling algorithm progress:
[%]: ...............50.....sampling algorithm progress:
[%]: ...10...30..100.sampling algorithm progress:
[%]: ...90.
50.40......
sampling algorithm progress:
[%]: 100...........................100...sampling algorithm progress:
[%]: ..........sampling algorithm progress:
[%]: ..........60..10................10
..40.....6010.....................100..............10..........
...
......10..50...70......20........50.....10..1070....2020.........100............................
.........20....8010.........50.......20......80.60..6030....30........30...sampling algorithm progress:
[%]: ...20..................sampling algorithm progress:
[%]: .....................90......20......30.........30examining piece 29054174..29092005 (37832 bp)
90......viterbi algorithm progress:
[%]: .70...Warning: Block unknown_B is not significant enough, removed from profile.
...............40...................40...................100.10.......
.30.....10.........100........
.......20.....4080...........50....sampling algorithm progress:
[%]: ............50.............examining piece 36939734..36978453 (38720 bp)
.viterbi algorithm progress:
[%]: .....20....1040...............30.20....30.........6040.....90.....50.....60.............40.60...........60..............................Warning: Block unknown_B is not significant enough, removed from profile.
....10............10030.......
....30....70.30.....50...70....60...................70....................20.......40...........examining piece 10629267..10667950 (38684 bp)
..50.40.viterbi algorithm progress:
[%]: ..20....................80.40......50..Warning: Block unknown_B is not significant enough, removed from profile.
..70...60..........80................80...........10......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
...................40....90..10....50............50........508010070...90........70.30........30..................examining piece 12703630..12741506 (37877 bp)
....100........
.20........viterbi algorithm progress:
[%]: .....examining piece 56356616..56395092 (38477 bp)
...........viterbi algorithm progress:
[%]: ...60..100..70.6090..
............20...6050..60.80.6080............................60..........100...
40........70....40....Warning: Block unknown_K is not significant enough, removed from profile.
................90........20.70......................30...60....80...examining piece 30258260..30301757 (43498 bp)
.................70....100..100..
......Warning: Block unknown_F is not significant enough, removed from profile.
....70..50.viterbi algorithm progress:
[%]: ..80.......................90............examining piece 52781792..52819617 (37826 bp)
....50...examining piece 5372373..5416596 (44224 bp)
......40....7090...70.100............viterbi algorithm progress:
[%]: ....80.90.100.viterbi algorithm progress:
[%]: .10.....
..
...................60..........30........................
.............80.100.2090..5080.
......
.....examining piece 4348872..4386778 (37907 bp)
....viterbi algorithm progress:
[%]: ....40.sampling algorithm progress:
[%]: .......70..............80..sampling algorithm progress:
[%]: ...60....100...sampling algorithm progress:
[%]: sampling algorithm progress:
[%]: .....10..................
.......100........90.
....10..........30.2030.........10.examining piece 8379871..8418023 (38153 bp)
.......80.viterbi algorithm progress:
[%]: ..........40.....903080.20..........60.........................................10..40100.......30.......
...9010......................20...10..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
..Warning: Block unknown_O is not significant enough, removed from profile.
.70..10.....50....40..40....................90...........................50....60..20..................examining piece 43094924..43132839 (37916 bp)
20....10.....50.30...10....examining piece 49331390..49369242 (37853 bp)
...viterbi algorithm progress:
[%]: .............60............viterbi algorithm progress:
[%]: .....20..70...........70............100..90....10....30..
...........30...70...10.......50.....................examining piece 37254482..37296812 (42331 bp)
....viterbi algorithm progress:
[%]: ....40.20...80.80................80.........................40100.............................3010.......90...20...30...40
..............Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
..90.......50........................60.100...
.20.........40.........................20.......50.....examining piece 19826177..19864032 (37856 bp)
..viterbi algorithm progress:
[%]: .............100.8010030.60..5030.
60
..50......sampling algorithm progress:
[%]: ...............40...90.....................sampling algorithm progress:
[%]: .......40.............10.............60............10.............70.10.....60...............50.10....40....sampling algorithm progress:
[%]: ......70.....examining piece 26837063..26874972 (37910 bp)
..............40.....50.2070...6020.....................100......viterbi algorithm progress:
[%]: ...................
.....1080......60..........3020..30......10...................3020.....80.70.......50.sampling algorithm progress:
[%]: ..............90..........20.20.100..40.................................
90..60.......40............90.70......50........70........30..90.3010...................80........................50.60..................90..70100......80......40
...........40...........sampling algorithm progress:
[%]: ...................70.803020......100........60..70
...50....................40.......50....10......80...................................sampling algorithm progress:
[%]: ..........80......70...80...30.................90.20.....60........10.90.....90................90................100....40.....80100....80.
...20..30...............4070........
......60.................30.......examining piece 40065423..40106576 (41154 bp)
.......viterbi algorithm progress:
[%]: .........4090....................100..........50.40.80.........50.......
........10...80.....30...50..........100.....50..
..90...................sampling algorithm progress:
[%]: ..9050..20.100...90sampling algorithm progress:
[%]: .................6060...
.......60........Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
......................................10.30..10.70.......100.......
....70...........................100.........8060.20....70..
.....100....40...20...Warning: Block unknown_J is not significant enough, removed from profile.
.....80..examining piece 39778181..39815952 (37772 bp)
...............50.....90.60.Warning: Block unknown_I is not significant enough, removed from profile.
.30................viterbi algorithm progress:
[%]: ..........examining piece 3228476..3271693 (43218 bp)
...30..6090..10080.100..9050
..........40.....50.....
..Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: .....70..70.....Warning: Block unknown_I is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
100
....
..40......50...examining piece 71541428..71583490 (42063 bp)
..........90.........20.60..viterbi algorithm progress:
[%]: ............50.examining piece 32840887..32920569 (79683 bp)
examining piece 68297458..68337816 (40359 bp)
60....sampling algorithm progress:
[%]: ............sampling algorithm progress:
[%]: .90..........viterbi algorithm progress:
[%]: ......................100......70.
..10..Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: ....60.............10.10.......70....examining piece 30620151..30662593 (42443 bp)
...........80......70..............40..examining piece 259282..297269 (37988 bp)
..viterbi algorithm progress:
[%]: ..70......viterbi algorithm progress:
[%]: ......20......70..20......90......Warning: Block unknown_D is not significant enough, removed from profile.
..............................10................80...10020...30.
10........examining piece 6844511..6882300 (37790 bp)
...30........60...viterbi algorithm progress:
[%]: ................20........80................100.90.....40........2010.......................40............30..80........100.examining piece 18648860..18686634 (37775 bp)
....10100.....50.viterbi algorithm progress:
[%]: ..
......80...............
.30......20.....50............40...........90........10.60.3080........................................60..30..
.50............40.20...Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
.70....20...........................sampling algorithm progress:
[%]: .......70.......70...sampling algorithm progress:
[%]: ...............80...40examining piece 33178153..33220131 (41979 bp)
..100....60.............30.........20....
.......viterbi algorithm progress:
[%]: .80.....50....90.....70.......10.40..90.50................60..............1050............sampling algorithm progress:
[%]: ...60..90.100.....
.......4070...................90..................70....20.....30......10....100.......
....90...........Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
..........8010.....60...................examining piece 3044536..3082520 (37985 bp)
.viterbi algorithm progress:
[%]: ..80....20..30.....50...............90.................50..80.40.....10...................30.100............70..........
40........90.....100.........10
........40..examining piece 47409240..47447122 (37883 bp)
.60.20.30...........sampling algorithm progress:
[%]: ...viterbi algorithm progress:
[%]: ...............5050.............8050..............80..................20....100..............100.30..60...60.
10....10.
...70..........................examining piece 2184357..2222239 (37883 bp)
.......70......viterbi algorithm progress:
[%]: .....60...sampling algorithm progress:
[%]: ..60...90...7010040........................20.80..............10..........sampling algorithm progress:
[%]: ...........80.................90....80..90
...........5020........sampling algorithm progress:
[%]: ...10.................30.......10030........100.....
...70....1030........20...90....................10.........60.............10.40.6030............90.....40....100........
................80..5040......100.............80..10.........
20..5060..50.........20......
...........examining piece 45777779..45815964 (38186 bp)
..40..70..viterbi algorithm progress:
[%]: ........60.sampling algorithm progress:
[%]: .70........70........20.................30...........70.60....80.........30....sampling algorithm progress:
[%]: .......................examining piece 14947163..14985243 (38081 bp)
...viterbi algorithm progress:
[%]: ..............80........90.100...............80
.10......10..40.......20.........70.....9010...100.....
.90...20...............sampling algorithm progress:
[%]: .50............................100......
........50.........30..10....20........80................2020.........90.......40....20.....40................60......2030......................30Warning: Block unknown_A is not significant enough, removed from profile.
90examining piece 30134610..30172708 (38099 bp)
Warning: Block unknown_O is not significant enough, removed from profile.
..viterbi algorithm progress:
[%]: ....................................10..50...............304060........3040.70..............100......examining piece 46915530..46966298 (50769 bp)
......100.....20100.......viterbi algorithm progress:
[%]: .....
....
....50..40.......
30........90..60...................3090............50.......50.....10.......40...30...80.60......50................................sampling algorithm progress:
[%]: ..........40...........20..........60..1070.....50...60...70........40.60.sampling algorithm progress:
[%]: .....10..................................................90................3020.90..60.80....70....70....examining piece 2292387..2340364 (47978 bp)
........viterbi algorithm progress:
[%]: .......50...70..........................50..70..30....80.............................90...70..1040........80.........100..........10...40...
.20.................60..30...................100.......
....80..5080........80........................50...90...90...........60.....70.....20...60......20.............................70......7090.................90....60...........100100.80..........90...
...80.....
....Warning: Block unknown_A is not significant enough, removed from profile.
.Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
.Warning: Block unknown_AA is not significant enough, removed from profile.
....100.....30...........30....sampling algorithm progress:
[%]: 
......30.100...90....80..
...100.....
80...10070examining piece 27303308..27341295 (37988 bp)
...70.40........100.....sampling algorithm progress:
[%]: 
..
...viterbi algorithm progress:
[%]: ..sampling algorithm progress:
[%]: ............sampling algorithm progress:
[%]: .........examining piece 84312625..84350468 (37844 bp)
10......................sampling algorithm progress:
[%]: ...10.100....................viterbi algorithm progress:
[%]: .........40
..10.........4010.........10..20......90.....80..........20......Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_V is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
.................20..80.....sampling algorithm progress:
[%]: ...........30..90...................10.10.......20........20.examining piece 35944355..35982189 (37835 bp)
......viterbi algorithm progress:
[%]: ......30..........3040...50..........................50.......5090...examining piece 46434834..46472716 (37883 bp)
........40.100.....................viterbi algorithm progress:
[%]: .....40.50....30
............30........10.....40...............20.........90...10..10.....40...50.................60.30.60............60..sampling algorithm progress:
[%]: ...............40.......50..........40..........60...100.....................................
20...100.20..10..........10030........20.7050..7060...
70..........60......10050..20....................
...........70..20..sampling algorithm progress:
[%]: ..........................80..................60..30....................70..............3060..40...80....90..10......................80....30.......................70.....100.....70100...305080
..40Warning: Block unknown_C is not significant enough, removed from profile.
80Warning: Block unknown_H is not significant enough, removed from profile.
..40...............20.70..........40...................50..........30...50...90....80..................examining piece 24811350..24849211 (37862 bp)
.....viterbi algorithm progress:
[%]: .90.50...examining piece 66550986..66588838 (37853 bp)
...30......40...........80.......70...Warning: Block unknown_B is not significant enough, removed from profile.
.Warning: Block unknown_K is not significant enough, removed from profile.
.......60......
..90.........viterbi algorithm progress:
[%]: .............90..10
...........100..80....40.60.
40..........examining piece 25612640..25652624 (39985 bp)
......sampling algorithm progress:
[%]: ..70........60...........90........sampling algorithm progress:
[%]: .....viterbi algorithm progress:
[%]: .........100.........100......50.
..50........
100........80...
..20....40..............................10070.....
...........sampling algorithm progress:
[%]: ...60....90.....70......................30examining piece 14341736..14381967 (40232 bp)
...10.....10.........40..90...Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
...50100...
60....viterbi algorithm progress:
[%]: 70......50.................90..80.........40examining piece 42621338..42659145 (37808 bp)
..10.........examining piece 40723698..40761685 (37988 bp)
viterbi algorithm progress:
[%]: ..viterbi algorithm progress:
[%]: .................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
..............80....10...............10............10..............Warning: Block unknown_E is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
Warning: Block unknown_P is not significant enough, removed from profile.
.20........10..2080..........60..50...70.90...90examining piece 1935053..1972896 (37844 bp)
...20..viterbi algorithm progress:
[%]: ................20100....................
...examining piece 24873250..24911120 (37871 bp)
...viterbi algorithm progress:
[%]: .....20.....10...................30..............100.......20..
...............60.........20...20.100....50106040..........30
.....80.....sampling algorithm progress:
[%]: ..30.80........3030................30.50.......70.....90...................................30..............60.....4010.50.50....................70.................examining piece 2100059..2147172 (47114 bp)
......viterbi algorithm progress:
[%]: ..........40........40.4020.90....50...................40......2020........60.40...............100....10.............80.....60..70......examining piece 20111354..20152896 (41543 bp)
.........80.....................3050.....70.......viterbi algorithm progress:
[%]: ......50100..50....20........
...................50..5060..70.............70..30....40................
........30................60..sampling algorithm progress:
[%]: ...................90......80.50Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_G is not significant enough, removed from profile.
Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_Q is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_Y is not significant enough, removed from profile.
Warning: Block unknown_AK is not significant enough, removed from profile.
Warning: Block unknown_AO is not significant enough, removed from profile.
........60...........................40..........90.......10...60............60......examining piece 48721083..48777726 (56644 bp)
..60.............7080.......40.....80......viterbi algorithm progress:
[%]: .....50.90100....30......20...
...70..............70..80......70....................................................sampling algorithm progress:
[%]: .70...8090.30.....60.100..............70.
....90....80............60.........10.................100..100..........
90..80.40.....sampling algorithm progress:
[%]: .........2080....sampling algorithm progress:
[%]: ....90..
..70...50................90................10..........100...80...30...........50............10..........100.........
.20..............8040.......sampling algorithm progress:
[%]: .........90........90.......80....2010.100.30........60..
50............................100.....40........40.........
...90.60.30..90.........................10.70.50....................100..70...........
...9090..40....sampling algorithm progress:
[%]: ..60...............60...........80.......60..80...................7050.............20examining piece 38057719..38095529 (37811 bp)
100.....viterbi algorithm progress:
[%]: ..........90.Warning: Block unknown_D is not significant enough, removed from profile.
.Warning: Block unknown_P is not significant enough, removed from profile.
..
.................80100..............10....60.....90....100.......
...10.....100.examining piece 24869854..24907703 (37850 bp)
....viterbi algorithm progress:
[%]: ..........90....100...
..........20.............1070.30............100..100100...
.examining piece 36065637..36107512 (41876 bp)
..sampling algorithm progress:
[%]: 100
....
...
....30.........20..
..
...50viterbi algorithm progress:
[%]: ....Warning: Block unknown_R is not significant enough, removed from profile.
.Warning: Block unknown_Y is not significant enough, removed from profile.
80...........
..............examining piece 6934538..6972354 (37817 bp)
20..40..........10....30.........40....examining piece 25436697..25484994 (48298 bp)
...60viterbi algorithm progress:
[%]: ....viterbi algorithm progress:
[%]: ..90Warning: Block unknown_O is not significant enough, removed from profile.
......sampling algorithm progress:
[%]: ..30.........sampling algorithm progress:
[%]: ...50....Warning: Block unknown_B is not significant enough, removed from profile.
......40.........10.........sampling algorithm progress:
[%]: .............20....examining piece 7596490..7638671 (42182 bp)
100..sampling algorithm progress:
[%]: .....
..10..viterbi algorithm progress:
[%]: ...................30.50..70.50.................examining piece 26159656..26202517 (42862 bp)
60.10.....................10.......20100.....70.............10....30....viterbi algorithm progress:
[%]: ......60......90.....20..................80.10.....30....................70..60......20......40.......30...........80..40.70......40.....20......sampling algorithm progress:
[%]: ...................................90.40.............20..80..50........20.....50..................70.....examining piece 42673945..42735881 (61937 bp)
..60.80.....viterbi algorithm progress:
[%]: .5050.
.......................60...............10...........100.........90..30
...sampling algorithm progress:
[%]: 30.60.....60....10...............70.................3090................sampling algorithm progress:
[%]: .8040..............70....80....10......60......10.80100..............
.70.............10...................80..100............
..40..90....30.10........sampling algorithm progress:
[%]: .........40............90.............1080...90...........sampling algorithm progress:
[%]: .100.......10.
.10.......70...20......................................10....100.....4020.
.........20.............90.50............20100........20...
..30.................20.....30...............50..30...20.40.......10080.....Warning: Block unknown_F is not significant enough, removed from profile.
......
......................4050.................60..............70.40....3050...40.60..........examining piece 56567341..56605142 (37802 bp)
....viterbi algorithm progress:
[%]: 30..............examining piece 31080706..31118567 (37862 bp)
.Warning: Block unknown_L is not significant enough, removed from profile.
.............60..viterbi algorithm progress:
[%]: ...2070................90......30.....10..........70....90...70.....80..10..50....50.........70..........Warning: Block unknown_F is not significant enough, removed from profile.
......examining piece 44212411..44251896 (39486 bp)
...............80.....90..........40.2020..............viterbi algorithm progress:
[%]: ....................90....100.40......
.100........6070.....
........60......20...examining piece 37807131..37848918 (41788 bp)
.100...30
30.....10.80.......................viterbi algorithm progress:
[%]: ..50...............40...30......40.............7040..50....................20....Warning: Block unknown_M is not significant enough, removed from profile.
...50......90........................50.....60..........50examining piece 23294027..23337724 (43698 bp)
80viterbi algorithm progress:
[%]: .60.Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_K is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
........60..........................examining piece 25521415..25568615 (47201 bp)
..80........3050100.....viterbi algorithm progress:
[%]: ..
....................30.90....70.........10..60examining piece 1849911..1910780 (60870 bp)
......................100...viterbi algorithm progress:
[%]: .................70.....100...60...10.
..40.......Warning: Block unknown_K is not significant enough, removed from profile.
..
.....8040...........6020.....7060....................examining piece 11627361..11681770 (54410 bp)
.10.viterbi algorithm progress:
[%]: ..........20............................90.......70.50.......................80.....Warning: Block unknown_B is not significant enough, removed from profile.
.sampling algorithm progress:
[%]: Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
............10...10...30......70.....20.......100.100....1090.
.......80...............examining piece 45153235..45205569 (52335 bp)
...viterbi algorithm progress:
[%]: ...70....5040........20.............90.....................20.......30..Warning: Block unknown_M is not significant enough, removed from profile.
Warning: Block unknown_O is not significant enough, removed from profile.
....30.10....80...30...
................40.....sampling algorithm progress:
[%]: ..40...........examining piece 42682455..42727083 (44629 bp)
.........viterbi algorithm progress:
[%]: ........100.............50
......70....80...20...................30........5060.10............90....sampling algorithm progress:
[%]: .....................60.......................60...70.10...1010..........70...................40....50........20........30808020.....................................30.......100....100...90.........
90................40.......40.80.9060...100.....
..
........100.2050.
30..20sampling algorithm progress:
[%]: .80...................40.......90.60.....80........80..........................70.90.......1070.........40...60...examining piece 12944635..12982445 (37811 bp)
..viterbi algorithm progress:
[%]: ....30...80....sampling algorithm progress:
[%]: .....examining piece 45242465..45280290 (37826 bp)
........50...viterbi algorithm progress:
[%]: ...100............
.......90......50........10020.....sampling algorithm progress:
[%]: ..10............30.....100.
50.
....5050................10...............10....10.......90..20......30sampling algorithm progress:
[%]: .............................................60....20.....20...........................70..40....208070..........30.......30.....10.......60examining piece 13217869..13255679 (37811 bp)
..viterbi algorithm progress:
[%]: ..........40.90..........70...............50.......3040................................30......10.......................10020....50...........40...........80.60..........60..........20...
.....6040.......60...................70.....40................30........70.50.90.....3070..90.....80......................50sampling algorithm progress:
[%]: ...................................50.....80.....80......50.........20.40...20.....40...10.100....80....
.60.....................90..............................90...20.........60...............100..50....
50.......................Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_N is not significant enough, removed from profile.
..100..30.....100.60....70
....70
....100.............70examining piece 47967519..48014192 (46674 bp)
...viterbi algorithm progress:
[%]: ......40.......60......9060.90.........90..
..........Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.....7010.50.60..examining piece 56952438..57005776 (53339 bp)
.........40............80....examining piece 23528016..23571937 (43922 bp)
.viterbi algorithm progress:
[%]: ..80viterbi algorithm progress:
[%]: .....................70.....60....70...40.........70..20....................10......................examining piece 11979780..12034944 (55165 bp)
.50..viterbi algorithm progress:
[%]: ...7070...sampling algorithm progress:
[%]: ........50......90..................................80....20.....10.....30............10080........................90...90....60........80..10....
...8060.100...........
..............90......30.....9020.....................40.......70.100...sampling algorithm progress:
[%]: ...........100.80.....
..
....3070..20...............70...100...sampling algorithm progress:
[%]: .............Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
.100.....30.....
.10.
..............80............40...100..90..50.....30..examining piece 12306667..12344930 (38264 bp)
.viterbi algorithm progress:
[%]: ......
.......10.......20.80......80.......examining piece 43950085..44014957 (64873 bp)
...viterbi algorithm progress:
[%]: ................10..40..........90sampling algorithm progress:
[%]: 90.....sampling algorithm progress:
[%]: ..............examining piece 45085776..45123715 (37940 bp)
30.40viterbi algorithm progress:
[%]: ...............................20........20...20....3010.....50.................60...........10.........10.........40..............20........50......100..90..30.........100....50.......
....9030......20...........5030.......80..........20..............10........sampling algorithm progress:
[%]: ............40......60..............10030....40........60.........40......50...70....
......30........100....
.......40...........10..
..........40...60sampling algorithm progress:
[%]: ...........70.....70..60...................8050.60....sampling algorithm progress:
[%]: ..........40....50.50.....sampling algorithm progress:
[%]: .....60............50...............20.................80.70...................30..........................80...50....10...80.20..1060.....60....10.............60.............80.90...30......................80......60....70........................60....70.......90................207020100........
...........20...10040.........70.......70.......................80.....70.................
..100.......90....
30......30....80..90.70..50......................10..80Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
..90.....30.......80.30...................80........90.40.............Warning: Block unknown_R is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
.........4060..examining piece 42135764..42183087 (47324 bp)
.100.90.......
.....................viterbi algorithm progress:
[%]: .....90sampling algorithm progress:
[%]: .....examining piece 2529822..2568247 (38426 bp)
....viterbi algorithm progress:
[%]: .....80............50..................40..80...100.........50..100.70.
....
......10.....10090..70..
..90.10...100........100...sampling algorithm progress:
[%]: ........60
....................
...40..........80.10.5060......Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
.......................20..20sampling algorithm progress:
[%]: ..Warning: Block unknown_H is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_J is not significant enough, removed from profile.
Warning: Block unknown_W is not significant enough, removed from profile.
..20........examining piece 9967145..10005132 (37988 bp)
..........70..............sampling algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ...examining piece 51706566..51759004 (52439 bp)
.....viterbi algorithm progress:
[%]: ........30......40.90.......examining piece 15680418..15719886 (39469 bp)
....70..................100......30.10.viterbi algorithm progress:
[%]: 40.....90.60....
...90.....100..10.......80.....................50..
...........100.....10...
.20........30......80.....sampling algorithm progress:
[%]: ....60.......50..40.......................................90..7030......100....20........70....sampling algorithm progress:
[%]: ........................60........80.......205090..................10..40........................100.....9010....
.........................70...40......50....30..examining piece 60476516..60522577 (46062 bp)
.100..viterbi algorithm progress:
[%]: ...
..........100.....60...10080..
..20.100...................20.
......60.........80..........
........
Warning: Block unknown_V is not significant enough, removed from profile.
.......10...30....30.........40..70.70.......................examining piece 25728327..25800282 (71956 bp)
.....examining piece 15318815..15356760 (37946 bp)
....viterbi algorithm progress:
[%]: ..50....9030.......sampling algorithm progress:
[%]: ....sampling algorithm progress:
[%]: .viterbi algorithm progress:
[%]: ..40.90.......examining piece 25917330..26001377 (84048 bp)
80....20............................10............80....sampling algorithm progress:
[%]: ...50......................50.........90......viterbi algorithm progress:
[%]: .........80.40..........10....90.....10..504010...20..100...30.............100......
..........100....
....60
.......90......................30..20..60............20sampling algorithm progress:
[%]: .......40.........10..60........20...50..70............Warning: Block unknown_O is not significant enough, removed from profile.
......30........100.......40
.........40..50............examining piece 33478602..33516727 (38126 bp)
...viterbi algorithm progress:
[%]: .....30........80........107040.................10.....30.....10.....10............60.......50....examining piece 32820489..32859969 (39481 bp)
.........50.........90...............40....Warning: Block unknown_F is not significant enough, removed from profile.
.viterbi algorithm progress:
[%]: ......................10...............60.408020..50.........100...60....
....70...70examining piece 43616108..43660829 (44722 bp)
20....viterbi algorithm progress:
[%]: ...90........50.........60..70.....................................50.....................30...70...90....80........20....60.........80..10.....................30........60.20........10........6090.............100..........80...........100.....70.40
....
................90100.20.....
............sampling algorithm progress:
[%]: ....20....8070..40examining piece 63715376..63753261 (37886 bp)
...10....70.......viterbi algorithm progress:
[%]: .....90..80....90...............50.......30....100............
..70..........Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_B is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
Warning: Block unknown_U is not significant enough, removed from profile.
Warning: Block unknown_X is not significant enough, removed from profile.
..10..80........60...50...90...........examining piece 59835286..59889052 (53767 bp)
............Warning: Block unknown_C is not significant enough, removed from profile.
Warning: Block unknown_D is not significant enough, removed from profile.
Warning: Block unknown_F is not significant enough, removed from profile.
Warning: Block unknown_H is not significant enough, removed from profile.
...viterbi algorithm progress:
[%]: ..............100.examining piece 11950193..11999474 (49282 bp)
..............100...examining piece 22049695..22087481 (37787 bp)
.viterbi algorithm progress:
[%]: ........50
40.....viterbi algorithm progress:
[%]: ..60...100..90.......
.20.......................10.60........80........sampling algorithm progress:
[%]: ..........10....3010..........30.........90.....90.100..60......20
.....10.........80...30.....50...........................7020...70..
..........2030.................70..........examining piece 16229781..16298537 (68757 bp)
......30.....Warning: Block unknown_I is not significant enough, removed from profile.
..Warning: Block unknown_Q is not significant enough, removed from profile.
.Warning: Block unknown_S is not significant enough, removed from profile.
Warning: Block unknown_T is not significant enough, removed from profile.
..viterbi algorithm progress:
[%]: ...20....40...................40....20.......40....................examining piece 54180911..54244913 (64003 bp)
....80.viterbi algorithm progress:
[%]: ..........10....50.8080.....sampling algorithm progress:
[%]: .........90...50..........60..50..............60.................9040.............20.......100...30.....70...90..........10...........60.60..
.90.............90.80....................10.........20........................90............10.100...702030....
.............30......70....100......
..........100...sampling algorithm progress:
[%]: ........40........40.........70.............100.......80..10030...5010.......
.
.....8030....Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_I is not significant enough, removed from profile.
..100Warning: Block unknown_Z is not significant enough, removed from profile.
.
....................60......Warning: Block unknown_J is not significant enough, removed from profile.
.....20..70..100..sampling algorithm progress:
[%]: ....
..examining piece 42229689..42288239 (58551 bp)
.......20.viterbi algorithm progress:
[%]: ...sampling algorithm progress:
[%]: ....40.70.............9090....40..
...20..30..........10...examining piece 34780219..34831204 (50986 bp)
........viterbi algorithm progress:
[%]: ...........................80..............2050...4010........sampling algorithm progress:
[%]: ........100........100....
...........
sampling algorithm progress:
[%]: .......30..........30....sampling algorithm progress:
[%]: .10...50.4010....90..................40......80.........sampling algorithm progress:
[%]: ....60................................Warning: Block unknown_A is not significant enough, removed from profile.
Warning: Block unknown_L is not significant enough, removed from profile.
.Warning: Block unknown_O is not significant enough, removed from profile.
...10.20.50...60........40..10.......10100...........
....................60.......examining piece 21890417..21930958 (40542 bp)
......20..............sampling algorithm progress:
[%]: ..70......viterbi algorithm progress:
[%]: .......70...............20.70.30.30.........20....................20.......30....10.30....80...80...40.30.....10.........................50..............5030.......9030..80.20.........20.......5090.............................60........100.....
.....60.......30...30.....................100.4030..70100........
..40....70........................90.......80...............80..40.....90......................90..50............90..40.............60....5020.50.100.....
......100.......100..20
.
................sampling algorithm progress:
[%]: ..60......60.......
...................5040..............sampling algorithm progress:
[%]: ..........40.70.60.....40......70..10................................70......80........................60.........30..50.10..80.......20.....90......40..70.................................2030..............100.....
......90.....70..30........2050........50....100...........80........100....
..80.60........
.....40..40............8040......30.60...........10....................50.90....80..........40.................90..70..sampling algorithm progress:
[%]: ..40........70......60................40......100.50.......50
.........100......50..
50......70.10...................................80..........80.6060...........80.....20...................60........90...5050.........70...........90..........30.....100...
...........50........8090.........50.........7040....90......50........90.....100.........
..60.50........70............100...
..sampling algorithm progress:
[%]: ....30....80.........60...............10..........60........20..........70.2060.....100............30....
.90............30.....80.........100....30.............sampling algorithm progress:
[%]: ...4040.80......90..............90...100..........
..50...........10...............100...
50...60.......................20....70.70............
60..........70.100.......8030....70..60.....sampling algorithm progress:
[%]: .........60..........90............70.40.
...................100.40
.....10......sampling algorithm progress:
[%]: .............50................90........50........10......80......20..60....70....................20......................60....70.........30....30................90.8080...........80........40...............40.70........80....50.8090................40.....................100..50..60...100....
........
......100...80........70......50........60.............90..80..
.................sampling algorithm progress:
[%]: ...........60.90.7090....70............10.90............100.....
..............20..80....90......70.............30......sampling algorithm progress:
[%]: 100..90100...........
...9040..........
..100..........sampling algorithm progress:
[%]: .
50......80......sampling algorithm progress:
[%]: ....100.......
...........60..10....10..10.....sampling algorithm progress:
[%]: .....................70..............20......20...............80.90..10..........30.......60............20.30..90..............40...........20.........100....
....100..40.....50...............100..
...30..
.6050......30..100........80........sampling algorithm progress:
[%]: 70........6040....
..................80.....sampling algorithm progress:
[%]: ..........10.....70...50.........40..90..............................101008020.
..sampling algorithm progress:
[%]: .......60.................................90.....10.3050....20......70.....................100..
..........20.40..........30..80....................30..5060.................90.40................40....60....................100..50.
.....50....70..70...................60.60..........80....90..............70....8070......90................80..............100.80
.......100.90..90...............100
.90............100.
.100
.70
.60...sampling algorithm progress:
[%]: ...........10..........8020............30............40..........50......90....60..........70...........80..........90...........100
100
.sampling algorithm progress:
[%]: ........10.........20........30.......100...40.....70......50.............60...
......8070........80...sampling algorithm progress:
[%]: ..........90........10......100.
.....20........30.........40........50........60.........70........80........90.........100
....90........100
sampling algorithm progress:
[%]: ........10........20........30........40........50........60........70........80........90........100