lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 3333333333333333 11111111 1 222222 222222222222 1111111111 1 3333333333 1 111 1111111111111111111111111111111111111111111111111111111111111111111111111111 111 111 111111 222222222222222222 666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 1111111111 5555555555555555555555555555555555555 1 1 22222222222 111111 1 333333333 222 11 111 2222222222222222222222222222222222 3333333333 1 1111111 1 4444 11 1 1111111 22 222222222 22 1 1111 111 1 1 11 1 1 1 1111 22222 1 44444444444 11111 4444444444444444444444444444444444444444444444444444444 555555555555555555555555555555555555555 33333333333333 1 4444444444444 1 11 333333 11 111111 1 11 2 1 33 1 1 1111 1 1
lowQualScore : 7777777777777777 11111111 5 3 2 5 7 77 222222 2 2 2 555555555555 33 8888888 1111111111 3 2 7 2222222222 1 3 3 3 222 3 555 1111111111111111111111111111111111111111111111111111111111111111111111111111 6666 3 777 44 555 3 222222 44 3 7777 5 666 444444444444444444 3 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 55 3333333333 6 6 3 6 0 9999999999999999999999999999999999999 4 7 22222222222 222222 44 0 6 888888888 999 6 11 3 999 9999999999999999999999999999999999 99999 3 555 3 777 6666666666 2 0 0000000 44 1 4444 6 00 3 5555555 00 444444444 55 00 7 1 666 9999 111 7 8 7 0 77 9 1 6 6 4444 3 44 44 44444 2 88888888888 44 6 22222 2 3 3 3 55 1111111111111111111111111111111111111111111111111111111 3 111111111111111111111111111111111111111 0 0 77777777777777 3 55 3 1 666 5555555555555 0 00 55 666666 66 3 7 000000 1 6 0 6 1 77 555 1 5 6 22 0 7 7 1111 8 0
lowQualScore : ................ ........ . . . . . .. ...... . . . ............ .. ....... .......... . . . .......... . . . . ... . ... ............................................................................ .... . ... .. ... . ...... .. . .... . ... .................. . .............................................................................................................................................................................. .. .......... . . . . . ..................................... . . ........... ...... .. . . ......... ... . .. . ... .................................. ..... . ... . ... .......... . . ....... .. . .... . .. . ....... .. ......... .. .. . . ... .... ... . . . . .. . . . . .... . .. .. ..... . ........... .. . ..... . . . . .. ....................................................... . ....................................... . . .............. . .. . . ... ............. . .. .. ...... .. . . ...... . . . . . .. ... . . . .. . . . .... . .
lowQualScore : 7777777777777777 22222222 2 1 8 7 2 00 000000 0 7 7 000000000000 77 7777777 7777777777 6 2 0 9999999999 5 1 2 5 888 1 444 2222222222222222222222222222222222222222222222222222222222222222222222222222 5555 1 555 66 999 3 444444 66 3 1111 0 888 666666666666666666 1 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 77 5555555555 0 8 5 2 2 6666666666666666666666666666666666666 6 0 77777777777 999999 66 2 8 777777777 777 5 77 3 000 6666666666666666666666666666666666 11111 6 888 3 333 4444444444 2 5 0000000 22 2 2222 5 99 3 4444444 22 777777777 00 44 3 1 666 2222 000 0 1 2 5 00 0 7 8 4 2222 0 66 66 33333 7 66666666666 66 4 55555 2 6 6 6 00 0000000000000000000000000000000000000000000000000000000 6 555555555555555555555555555555555555555 9 5 99999999999999 6 00 6 1 444 1111111111111 9 11 55 333333 55 3 6 555555 4 0 7 0 8 88 444 2 4 5 99 5 3 0 7777 8 5
consensus : TAAATGCTATAT--AC----AN------TT--------TTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTAAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGAT-AA-TTT-----------GTTTAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACAATCA-GACACAATAATTTT--NAA-TAACT---TA----TTN----C--A-------TT-----CCN-----TT-----G-TCGAA------T---------A------NTC----G-CTT--CATT--TGTAN-AAA-GN-A-T-AC--GTT-CTT----CATNCAACG--GA------------------TCTGAGNAATAAA---------------------TAT--------------------A----A-A----------------------A-----------------------A----C----------A------------------------T------------------------CAT-------GTAAAA-T----------AGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCA---T---GG-GA---G---C----ATTATG-TGGG--GCATCAGGAAGAGATACAAGACAGACAGGTAGA----CA----TA------TAG--ACATGTGCGGATAGGCAGCCAGAC-AT-G-AAACGCCGATAGACGCCACGATCGAGCCGCTAA--CAACACA------C--AT------A------C----A----GA-----AACAA-GTACTATGTATAACTGTAACTATTTA---TCAA-ATTAA-T--T--T-ATTTCAACGCCACGATAACTACATCAATAATATA-------TGTATATAA--CTAAGGTGATACAGATTANACAAA-A--AACACATNTCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTCTATATATACAT-A---CTT--AANGTTTTTAGATGGAAA-TTTATACA--ATATAAC-ANGTGT--GTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAA----TANA--TG--AA----CTCGTTAATAAAC-AT-AN-----T--ACGTAT----AGTCTATGTGTAGA-AAA-TA-GAG--TANA--C-----------AC--T--CATT-----ACT---A----------------TT-TTCCTCGTTGT---------------A-TT-TT---------A-------TGACAGAATCTG---------NGC--A-AAA--TA-AATTAA---TGGT---TA---ATATCTACGACN-AAA--TATATNN----GAATTGAAGTT-ATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAAGGA-CACAC--ACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
Reference ( gi|2 ) : TAAATGCTATAT--GC----AT------TT--------TTGAAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTCAATGTAAAGAAAAAAATGTTGACCATTATTCAAATGTCTGAT-AA-TTG-----------GTTTAA--CT-------AT----------ATCTGAATTATATATGCAAATTCACAGTCAAGCATGCATGCCCGCAGAAGGGTTTAATAATCA-GAAACAATAATTTT--TAA-TAACT---TG----TTA----C--A-------TT-----CCA-----TT-----G-TCGAA------T---------A------GTC----G-CTT--GATT--TGTAC-AAA-GA-A-T-AT--GTT-CTT----CATTCAACG--AA------------------TCTGAGTAATAAA---------------------TAT--------------------A----A------------------------A-----------------------A----C----------A------------------------C------------------------CGT-------GTAAAA-T----------AGAAACAGATACACATCGGCATGTGTTCACACAAGGACACAGATAATGCA---T---G---A---G---T----ATAATG-CGGT--GCATCAGTAAGAGATACATGACAGACAGGTAGA----TA----TA------TAG--ACATGTGCGGAAAGGCAGCCAGACTAT-G-AG-CGCCGATAGACGCGGAGATCAAATCACTAT--CAACACA------C--AT------A------C----A----GA-----AACAA-GTACTATGTATAACTGTAACTATTTA---TCAA-ATTAA-T--G--T-ATGTCAACGCCAGGATAACTACATCAATAATATA-------TGTATATAA--CTAAGGTGATACAGATTACACAAA-AGAAACACATATCATTGATTAACGAACGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTAGCTGCAAACGCTACCGTCTATATATGCGT-T---CTT--ATAGTTTTTAGATGGAAA-TTGATACA--GTATAAC-AT-TGT--ATGAACGCGTTGAAATATTT-CTTCAATAATCTAATAAAGAGTTACGTGAA----TAAA--TG--AT----CTCGTTTATAAAC-TT-GT-----T--ATGTAC----AGTCTGTGTGTAGA-AAA-TA-GAG--TAAA--C-----------AC--T--CATT-----GCT---A----------------TT-TTCCTCGTTGT---------------A-TT-AT---------A-------TGACAGAATCTG---------TGG--A-AAA--TA-ACTTAA---TGGT---TA---ATATCTACTACT-AAA--TATATAT----GAATTGAAAAT-ATTTATTGATTTCT------TTCAACAGTATTAATTAAAACGAAAAGGA-AACAC--ACGTCTAACTTAATATGGTATTTTTACAGACATGAATTGCAAATCGATAGGAACAAGAA----TATGAAGTCGGCAATATCCCTTGCCATTCTGTATA
gi|3 : TAAATGTTATAT--AC----AA------TT--------TTGCAATTAAAAATACATATGCAACGAAACTT-TGAGACATACTCTTCAATGTTGGGAAATAGATATTGACCATTATTCAAATGTCTGAT-AA-TTT-----------GTTTAC--CT-------AT----------AT-------------GCACATACAAAGTTAAGCGTGCATGCCCGCAGATGGTCGTGACAATCA-GACACAATCATTTT--TAA-TAATT---T-------A----C--A-------TT-----CCA-----TC-----G-TCGAA------T---------ATCTATAGTC----G-CTT--CATT--TATAC-AAG-GA-A-T-AT--GTT-CT------AT--------AA---------------------GAGCAA-----------------------------------------------------------------------------------------------------------C----------A------------------------T------------------------CAT-------GTAAAA-T----------AGCGGCAGATACGCACTGACATTTATTCACACCAGAACACAGATATTGTA---T---G---G---GGAAC----ATTATG-TAGG--ACATCCGAAAGAGACACAAGACAGACAGGTAGAAAGACA----TA------TAG--ACATGTGCAGATAGTCAGCCAGACGAT-A-AT-CGCCGACAGACGCCACGATCGAGACGCTAA--CAACACA------C--AA------A------C----A----GATAAAGAA-AA-GTATTATATATAACTGTTACTATCTA---TCAA-ATTAA-TT-A--T-ATTTTAACGCCAGGATAACTACATCAATAATATAATTTTTATGTATATAA--CTAAGGTGATACACATTACACAAA-A--AACACATATCAT------------------ACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGAAAATGCTACCGTCTAAATATAGAT-G---ATT--AAAGTTTTAAGACGGAAA-TTTATATA--GTATAA---T-TGT--GTATACGCCTTGAAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAA----TACA--TG--AA----ATCGTTTATAAAC-AT-AG-----T--ACGTAT----AGTCTCTGTGAAGA-AAA-AA-GAG--TAAA--C-----------AC--T--CATT-----ACT---A----------------TT-TACCTCGTTGT---------------A-TT-CT---------A-------TGACATAATCTG---------TGC--A-AAA--TA-AATTAAAAGTTAT---TA---ATA-CAACGACT-AAA--TATATTA----GAATTGAACAT-ATTTATTGATTTCT------TTCAACAGTATGTATTGAAACGAAAAGGG-CAAAC--AGGTCTATCTTCATATGATAGTTTTACTTGCATGAATTTCAAATCGAAAGGAACAGGAA----TATGTAGTTGGTACTAACCCTAGCCATTCTGTATA
gi|1 : taaatatgattaatcaataTAAATGTTATAT--AC----AA------TT--------TTGCAATTAAAA-TATATTTGCACCGTAACTT-TGATATATACACTTCAATGTAGGGAAAAGA-CATTGGCCATTATTCAAATGTCTGAT-AA-TTT-----------GTTTAA--TT-------AT----------ATCTGAATTTTATATGCCAATACACAGTCAAGCATGCATGCCCGCAGATAGGTTTAACAATCA-GAAACAATAATTGT--TGA-TAACT---T-------A----C--C-------TG-----GCT-----TA-----G---GAA------G---------A------AAC----A-ATG--TATT--TCTAC-GAG-GA-A-T-AC--TTT-CTT----TATTTAACC--GA------------------TCTGAGTAATAAA---------------------TAT--------------------A----A------------------------A-----------------------A----C----------AATATCAACGGGTATAAGAGCAACAT------------------------CAT-------GTAAAA-T----------AGAGACAGATACCAACTGGCATGTGTTTACACAAGGACAAAGATGATACA---T---GGTGA---G---C----ATTATG-TTGA--GCATCAGGAAGAGATTCAAGGGAGACAGTTAAA----CA----TA------TAG--ACATGTGCGGACTGGCAGCCATACGAT-A-AA-TGCCGATAGACGCGACGATCGAGCCGCTAG--CAACACC------C--AT------A------C----A----GA-----AACAT-GTTCTATGTATAACTGTAACTATTCA---TCAA-ATTAATT--A--T-ATTTCAAAGTCA-GATTAC-ACATAAA-AA--------------ATATAA--TT-----------GATTA-ACGAT-AGAAA--------------TAACGACCGGAA------------------GATTGTGTATCCGATGTGTCTGCCTGCAAACATTACCGTCTATATATACAT-A---CTTTAAT-GTTTTTAGATGGAAA-TTGATACA--GCATAAC-AA-TGT--GTGTTCGC-CTGAAATATTTATTTTAATAACCTAATATAGCATTACGTGAA----AAAA--TG--AT----CTCGTTTATAAAC-AT-AT-----T--ACGTAT----ATTCTGTGTGTAGA-AAA-TA-GAG--TAAA--C-----------AA--G--CATT-----ACT---A----------------TT-TTCCTCGTTGT---------------A-TT-TT---------A-------TGACAGAATCTG---------TGC--A-ATA--TA-AAGTAA---TGGT---T----ATTTGTACTACGAAAA--AATATATTA--GAATTGAAAAT-ATCTATTGATTCCT------TCCAACAGTATTTATTGAAACGAAAAGGA-CATAT--AGGTCTATCTTCATATGGTATTTTTACTTACATAAATTTCAAATCAAAAGGAACAAGAT----CATGTAGTCGGCACTTTCCCTAGCCATTCCGTAtaactcagatgt
gi|6 : cttaaatatgctaaatcaataTAAATGCTATAT--AC----CA------TT--------TTGTAATTAAAA-TACATATGCACCGTTACTT-TGAGACATACTCTTTAATGTAGAGAAATAGAAATTGACCATTTTTCAGATGTCAGAT-AA-TTT-----------GTTTAA--CT-------ATCTTTGACTATATATGAATCAGATATGCAAATACACAGTTCAGCATGCATGCCCGCAGATGGGCGTGACAATCA-GACA-AATCATTTT--AAA-TAACT---TT----TT-----C--A-------TT-----CCT-----TT-----G-TCGAA------TGTCTTC---A------TTC----G-CTT--CATT--TGT-T-AAA-GT-A-CGAC--GTT-TTT----CAGTCAACA--AA------------------TCTCAGTAATGAA---------------------TATTAAACAATATTAACGGTTACA----AGAGC--------------------A-----------------------A----C----------A------------------------T------------------------CAT-------GTAAA--T----------AGAGACAGATACACGCTGACATATGTTCACACAAAGACACAGATAATGCA---T---GGTGA---A---C----ATTATG-TGGG--ACATCTGCAAGAGAAGCAAGACAGACAGGTAGA----TAGA--CA------TAGGGACATGTGCGGATTGGCAGCAAGGC-AT-A-AAACGCCGATAGACGCCACGATCGAGCTGCTAA--CAACACA------CCTAT------A------C----AAACAGA-----AACAA-GTACTATGTATAACTGTTTCTTTGTT---TCAA-ATTGA-T--T--TTATTTCAACGCCACGATAACTATACCAATAATATA-------TGGATATAA--CTAAGGTTATACAGATTA-A-AAA-ACACACACATATCATTGATTAACGATCGAAATTACGACCG------AACGATTGAGGATCCGATGTGC----CTGCAATCGTTACTGCCTATATATATATATATACTT--AACGTTTTTAGATGGAAA-TTTATACAATGTATGCG-AC-TGT--GTGTACGacttattcag
gi|7 : tttaatatgcttaatcaataTGAATGCTATAT--AA----ATGTAGAATT--------TTGCAATCAATA-TATATGTGCACCGTA--TTATGAGACATACTCTTCAATGCAGAAAAATAGCCATTGATCATTATTCAGATGTCTGAT-CA-TTT-----------GTTTAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATACCATTAGATGGGCGTGACAATCA--ACACAATAATTTT--AAA-TAACT---TACTGCTTC----C--AATCTCTTTT-----CCA-----TT-----G-TCTTT------T----------------TTC----G-CTT--CATT--TGTAG-AAG-GC-G-T-AT--GTT-CTT----CATCCGTCG--GA------------------TCTGAGAAATAAA---------------------TTT--------------------A----A------------------------A-----------------------A----C----------A------------------------CTATAAAAGGTTATAAGAGCAATATCAT-------GTAAAC-A----------AGAGATATCTACGCACCGGCATCTGTTCACACAAGGACACAGATAATGCA---T---GGTTA---A---C----ATTATG-TGTG--GCATCAGGGAGAAATACAAGACAGACAGGTAGA----TA----TACGTGTATAG--ACATGTGCTGATAGACAGCCGGAC-AT-G-AAACGCCGTTAGACG-----------TCACGATAGCAACACA------C--ATTC----A------CCTAAA----GA-----AACAAAGTATTATGTGAAAGTGTATATATTTA---TCAA-ATTAA-T--T--TTATTTCAACGTCACGATAAATACGTCAGTAATATA-------TGTATCTAA--GTAAGGTGATACAGATTAAACAAA-C--AACACATCTCATTGAAAAATGATCGAAATTACGACC---------TG--TGTGGATCCAATGTGTCTACCTGCAATCGCCACCGTCTATATAGACAA-A---CTT--AATGTTTTTAGATTAAAA-TTTATACA--ATATATC-AA-TGT--GTGacttgtattataaaacaaatattgcag
gi|9 : ctttaatatgctaaatatataTAAATGAAATAT--AC----AA------TT--------TTGCAATTTAAA-TAAATATGCACCGTAAGTT-CGAGACATACTCTTAAATGCAGGGAAACATA-------CATTATTCAGATGTCAGAT-AA-TTT-----------GTTTAA--CT-------AT----------ATTTGAATTAGATATGCAAATACACAGCCCAGCAAGCATGCCAGCAGATGGGGGTGACA-TCAAGACACAATAAGTTTGATGACTAACT---GT----TTC----C--T-------TT-----CTG-----TT-----G-CCGAAAA----T---------A------TTTCATAA-CTT--CATT--TGCA--AAA-GCCA-T-AC--GTT-CTT----CATTCAACG--AA------------------TCTGAGTAATAAA---------------------TATTA------------------A----ACAGTATATACAGTTATTAGAGC--A-----------------------A----C----------A------------------------T------------------------TAT-------GCAAAC-T----------TGAGACACATACACACCGACATATCTACACACAAGGACATGGATAATGCA---AAGAG---G---G---C----ATTATA-TGGG--GCATCAGGAAGAGATATAAGACAGACAGGTAGA----CA----TA------TAT--ACGTGTACTTGTATGCAACTAGGC-AT-GGAA-CGCCGATAGA--------TCGAGCCGCTA----AAAGTA------C--AA------A------C----A----GA-----AACAA-ATACTATGTATAGCTGCAACTGTTTAATATAAACATT---T--T--T-ATTTCAACGCCAAGATAACAACATCATTAATATA-------TGCATATAAAACTAAAGTGATAAAGATTAAACAAA-C--AACACATCTCATTGAT-AACGAACGAGATTACGACCG------AACAATTGTAGATCCGATGCGTCTGACTGCAAACACTAACGTCTATATAAACAT-A---CTT--AATGTTTTTAGATGGAAA-TTTAAACA--ATATAACAATGTGT--GTGTACGCCTTGTACTATtgtagccttttaatataaaggtattgcagt
gi|11 : tttatatgctaaatcaataTAAATGCTCTAT--AC----AC------TT--------TTGCAATTAAAA-TGCATATGCACCGTATCTT-TGAGACATACTCTTAAATGTAGGTAAGTAAATACTGACCATTATTCAAATGTCCTAT-AA-ATT-----------GTATAAAACT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGCATGCA-----GCAGA-------------CA-----CAATATTTTT--AAA-TAACT---TA----CTC----A--A-------TTTAATGCC------TT-----G-TGGAA------T----------------GTC----GTCTTTCGTTTCTTTTATTAAA-GG-ACT-AT--GTT-TTT----CATTTTTCG--GA------------------TCTGCGAAATAAA---------------------TAT--------------------A----AAACAATATAAACGGTTATAGGAGCA-----------------------A----C----------A------------------------T------------------------TAT-------ACAAAAAC----------AGAGACAGATACTCACCGATATATGTATACATAAGGACATAGAAAATTCA---T---GGAGA---G---C----AAATTGTCGG---GAAGCAAGAAGATATACAAGACAGACAGGTGG-----CA----TA------TAG--ACATTAACGGATAGGCAGCCAGACGAT-A-AT-CGTTGATAGACGCCAATATCTAGCCGCTAA--CAACACA------C--ATGCACATA------C----A----GA-----AACAA-TAACTATGTATGACTGTAACTATTTA---TCAA-ATAAA-T--TC-T-ATTTTAACGCCAGGATAACTACACCAATAATATA-------TGTATATAA--CTAAGCTGATACAGATTACACAAA---CAACACACATCATTGATTAATGATCGAAATTACGACCG------TACGATTGTGGATCCGACGTaaaaaaacattgcagt
gi|22 : tttaatatgctaaatcaataTAAATGCTCTTT--AC----AA------TT--------GTGCAATTAAAA-TACACATGCACCGTATTTT-TGAAACATACT--TAATTGTAGGGAAGTAGACATTGACCATTATTCAAATGTCGTATAAA-TTG-----------A-TTAA--CT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGTATGC----------------------GTCA-GACACAATAATTTT--AAA-TAACT---TA----CTGAAATT--A-------TT-----GCC-----TT-----G-TGAAA------T----------------GTC----G-tacgtgaataaatgtgattaaactcgttaataaacataatacgtatagtctatgtgt
gi|28 : ctttaatatgctaaatcaataTAGATACTATATTAGTTCAGAA------TT--------TTGCATTTAAAA-TAAAAATGCACCATAGCTT-TTAGACATACTCTTAAAGGTAGAGAAATATACATTGACTATTATTCAGATGTCTGAT-AA-TTtatttcattccatttatt
gi|12 : tttaatatgcttaatcaataAATGCTGTAT--AC----AA------AT--------TTGCAATTAAAA-TACATATGCACCGTAATTT-TGAGACATACTTTTGAATGTAGAAAAATAGACTTTGACCATTATTCAGATGTCTGAT-AA-TTT-----------GTTTAT--CT-------AT----------ATCTGAATC-TG-ATGCAAATACACAGTCCAGCATGCATGCCCGCAGACGGGCGTGACAATCA-GACACAGCAATTTT--TTA-T---T---TA----T------C--A-------TT-----TC------TT-----------------------------------GCC----G-CTT--TACT--TGTAA-AAG-GA-A-T-AT--ATA-CTT----CATACAACG--AA------------------TCTGAATAACACA---------------------TAT--------------------A----G------------------------AACAATTAAAGTGTTTATAAGACGA----C----------A------------------------T------------------------CAT-------GTAGAA-T----------AGAGACAGACACGCACCGACATATGTTCGCACAAGCACACAGAGATTGCA---T---G-------G---TGCTAATTATG-TGGA--ACATCAGAAATAGATACAAGACAGACAGCTAGC----CA----TA------TAG--ACATGTGCAGATAGGCAGCCAGAC-ATGG-AA-CGCCGATAAACGCCACGATCAAGCCGCT---------------------T------A------C----A-------------------ACTATTCATAACTGTAAATATTCA---TCAA-ATTAATT--T--T-ATTTCAACGGCACGATAACTTTATCA--------------------ATAA--CTAAGGTGATACAGATTAAACAAACAG---CACATATCATTGATTAACGATCCAAATTACGACCA------AACGATTGT-GATCCGATGTGTCTGCCTGCAAACACTACCGTATTTATATACAT-G---CTT--AAAGTATTTAGATGGAAA-TTTATACA--ATATAAC-AA-TAT--GTGTACACTTTGAAATATtg
gi|13 : atatgctaaatcactattAATGCTATAT--AA----AT------GTACAAAATGTTGCAATTAAAA-TACATATGCACCGTAACTT-AGAGACATACTCTTAAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGAT-AA-TTT-----------GTTTCA--CTATATCTGAT----------ATCTGAATCATATATGCAAATACGCAG-CAAGCATGCATGCCCATAGATGAGCGTGACAATTT-GACACCGTAATTTT--AAA-TAACT---TA----CTG----C----------TT-----CCAATCTCTA-----G-TCCAATGTCTGT---------A------TTC----G-CTT--CATT--TGTA--AAA-GACA-T-AC--GTC-CTT----CATCAAACG--GA------------------TCCGAGAAATAAA---------------------TAT--------------------A----A------------------------A-----------------------A----C----------A------------------------CAATAAACGGTTATAAGAGCAACATCAT-------GTAAAC-T----------AGAGACAGATACACAATGACATATGTCCACACAAGGACACAGATAATGTA---CGGAG---A---G---C----GTTATT-TGGG--ACAGCAGGAAGAGATACAAGACAGACAGGTAG------------A------TAA--ACATATGCTGATAGGCAACCAGAaac
gi|10 : ctttaatatgctaaatcaatattTGCTATAT--AA----ATGTGGAATT--------TTGCAATCAAAT-TATATATGCACCGTA--TTATGAGACATACTCTTCAATACAGAGAAATAGACATTAATCATTATTTAGATGTCTGAT-GA-TTT-----------GTTTAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCAGCAGATGGGCGTGACAATCA-G--ACAA-AAATTT--AAA-TAACT---TA----CTG----C----------TT-----CCAATCTCTT-----G-TCCAA------TGTCTTC---A------TTC----G-CTT--CATT--TATAA-AAG-GC-G-T-AC--GTT-CTG----CATCCCACA--TA------------------TCTTAGAAATAAA---------------------TAT--------------------A----A------------------------A-----------------------A----CAACACTATAAA------------------------C------------------------GGTTATAAGAGTAACA-TCATGTAAACAAGAGACATATA-ACACTAACATATTTATACACAAGGACACAGATAATGCATGGT---G---A---A---C----ATTATA-TGGG--GCATTAGGAAGTGATACAAGACAGACGGGTAGA----CA----TA------T----ACATGTACGTGTAGGCAGCCTGAC-AT-GAAA-CGCCGATAGACGTCACGATCGAGCCGCTGA--CAACACA------T--AT------A------C----ACATGGA-----GACAA-A-AGTATGTAAAAGTGTAAATGTTTA---TC---ATT---T--T--T-TTTTT------------ACTACATCAATAATATA-------AGTATAAAA--GTAAGGTGATACAGATTTAACAAA---CAACACATCTCATTGAATAACGATCGAAATTACGACC---------TG--TGTGGATCAGATGTGTGTGCTTGCAAACGCTACCGTCTTTATAAATAT-A---CTA--ACAGTTTTTAGATGTAAA-TTTATACT--ATATAAC-AA-TGT--GTGt
gi|5 : ctttaatatgcaaaatctatatgctATGT--AC----ATAA----TT--------TTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGATGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGAT-AA-T---------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCGTCAAGCATGCATGCCCGCAGATGGATGTGACACTCA-GACA-AATAATTTT--GAA-ACACT---TACCGATTT----C--G-------TT-----C-A-----TT-----GGTCGAA------TGTAATATCTA------ATC----G-CTT--CATT--TGT-C-AAA-CA-A-CGAC--GTT-CTT----CATGCAAAA--CA------------------TCTGAGTA-TAAAATACAAGATAATATCAACGATTAT--------------------A----AGAGC--------------------A-----------------------A----C----------A------------------------C------------------------CAT-------GTAAAG-T----------AGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCA---T---GGAGA---G---C----AT--TA-CGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGTAGA----TAGAC-TAA-----TAG--ACATGTGCGGATAAACAGCCAGAC-AT-G-AAACCCCGATAGACACCATGATCGAGACGCTGA--CAACACA------C--AT------ATACATAC----A----GA-----AACAA-GTTTTATGTATAATTGTTACTATTTA---TCAA-ATTCA-T--TCTT-TTTTCAACGCCACGATAACTACATCAATACTATA-------TTTGTATAA--CTAAGGTGATACACATTACACAAA-CAAAACA--TCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTATCTGCCTGCAATCGCTACCGCCTATATATACAA-A---CTT--AACGTTTTTAGATGGAAA-TTTATACA--ATATAAC-ATGTAT--GTGTACGCTTTGTATTATtgtacgtctttttat
gi|4 : tttaatatacttaaacaatatatatactatattaATGT--AC----ATAA----TC--------TTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGACGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGAT-AA-T---------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCATCAAGCATGCATGCCCGCAGATGGATGTGACACTCA-GACA-AATAATTTT---AA--AACA---CG----T-A----CCGA-------TT-----TCG-----TTCATTGG-TCGAA------TGTAATATCTA------ATC----G-CTT--CATT--TGT-C-AAACGA-C-G-AC--GTT-CTT----CATGCAAAA--CA------------------TCTGAGTAATAAA---------------------TAC--------------------A----AGATAATATCAACGATTATAAGATCA-----------------------A----C----------A------------------------T------------------------CAT-------GTAAAG-T----------AGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCA---T---GGAGA---G---C----AT--TA-CGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGTAGA----TAGAGATA------TAG--ACATGTGCGGATAGACAGCCAGAC-AT-G-AAACCCCGATAGACACCACGATCGAGACGCTGA--CAACACAACTATAC--AT------A------C----A----GA-----AACAA-GTTTTATGTATAATTGTTACTATTTA---TCAA-ATTCA-TTCT--T-TTTTCAACGCCACGATAACTACATCAATACTATA-------TTTGTATAA--CTAAGGTGATACACTTTACACAAA---CAACACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTTTCTGCCTGCAATCGCTTCAGCCTATATATACAT-A---CTT--AACGTTTTTAGATGGAAA-TTTATACA--ATATAAC-ATGTAT--GTGTACGCTTTGTATTATgaaaacaaacattgcagtg
gi|8 : ctttaatatacttaaacaatatatatactatattaATGCACCGTAACTG-TGAGATATACTCTAAAATGTAGGGAAATAGACATTGACCATTAGTCAGATGTCTGAT-AATTTGTTTAACTATTTGTTTAA--CT-------AT----------ATCTAAATCAGATATGGAAATACACAGTCAAGCATGCATGCCCGCAaaaacaaacattgcagtg
gi|14 : ataAATGTAGGGAAACAGACATTGGCCATTATTCAGATATCTGAT-GA-TTC-----------GTTTAA--CT-------AT----------GCCTGTATTATAACTGCAGACACACTGCCAAGAAAGCATAGCGGCAGATGA----AAT-ATCA-GACAAAATAACTAT--TAA-TAACTTACTG----TTGT---C--A-------CT-----CTC-----TC-----G-TTGAA------A---------A------ATC------CT----ATG--TGGAA-AAA-GT-T-T-ATTCGCTGCTTCACGCATTAAACGCCAATAAAATTTATCCAGAGGCTCTGAGAAATAAA---------------------TAT--------------------ACGACA------------------------ACATAAACGGTTATAAGAGCA---A----C----------A------------------------T------------------------CAT-------GTAAAA-T----------AGAGACAGATACGAACCGACATATACTCGCACAAGGACAAAGATacaatacactatattttaataaaggaatcttgacaaatacatataaaacaatataatcggttataagagaaccattatgcagcatagaggcagatacacaccgacatatgtatatacaaaaacacatatgatgcatgaagagcatggtgtggggtatcaggaagagtaacaagacaaacaggtagacttagaaacatgtgcagataaactgccagacatgaaacgctgataaacgccgagatcgaatcactatcaacacacatatgcatacagaaacaagtgctttgtataactgtaactatttatcaaattgatttaattttaacgccatgataagtacatcaatgtcatatgtatataaatagggtaatacagattgcacaaacaacacatattgattaacgatcgaaattacgaccgatcaataattattgtggatccggtatgtctatctgcaaacgataccgtctatgtttacgtacttaaagtttgtaaatggccatttaatcaatataacaatgtgtgtgtacgccatgtaatatagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
gi|34 : atgtaaccatagatatatatgtgatatgTAA--CT-------AT----------ATCTGTATCAGATATGCAAATACACCATCAAGTATGCATGCCCGCAGA
gi|8 : ---------------------TAT--------------------A----A------------------------G-----------------------AGAACC----------A------------------------T------------------------TAT-------GCAGCA-T----------AGAGGCAGATACACACCGACATATGTATATACAAAAACACATATGATGCA---T---G---AAGAG---C----ATGGTG-TGGG--GTATCAGGAAGAGTAACAAGACAAACAGGTAGA----CT----TA------GAA--ACATGTGCAGATAAACTGCCAGAC-AT-G-AAACGCTGATAAACGCCGAGATCGAATCACTAT--CAACACACATATGC--AT------A------C----A----GA-----AACAA-GTGCTTTGTATAACTGTAACTATTTA---TCAA-ATTGA-T--T--TAATTTTAACGCCATGATAAGTACATCAATGTCATA-------TGTATATAA--ATAGGGTAATACAGATTGCACAAA---CAACACAT---ATTGATTAACGATCGAAATTACGACCGATCAATAATTATTGTGGATCCGGTATGTCTATCTGCAAACGATACCGTCTATGTTTACGT-A---CTT--AAAGTTTGTAAATGGCCATTTAAT-CA--ATATAACAATGTGT--GTGTACGCCATGTAATATttgatgtgacaa
gi|21 : ataatgcaccgtaactgtgagatatactctaaaatgtagggaaatagacattgaccattagtcagatgtctgataatttgtttaactatttgtttaactatatctaaatcagatatggaaatacacagtcaagcatgcatgcccgcaacaatacactatattttaataaaggaatcttgacaaatacatataaaacaatataatcggtTAACTGTAACTATTTA---TCAA-ATTAA-T--AC-T-ATTTCAACGCCACCATAACTTCATCAATTTTATA-------TGTATTTTA--G-AAGGAGATACAGGTTTAACAAA-C--AACACATCTCATTGAA-AACGCTCGAAATTACGACCT------A-----TGTGGATCCGATGTGTGTGCTTGCAAACACTACCGTCTATACAAACAT-A---CTA--AAAGTTTTTAGATGGAAATTTAAT-CA--ATATAAC-AA-TGTGCGTGTACGCCTTGTAAT------TTAAATAATagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
gi|31 : AACAAA-------CGTATATAA--CTGATGCGATAAATATTA-ACCAA-ACA--CATATATTATTGATTAATGTTCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTTCCTGCAAATGCTACCattg
gi|30 : AACAAATATCATCGAATAACGATCGAAATTACGACCT------AATAATTGTGGATCCGA----------TGCAAAAGCTACCATCTATATATACAT-
gi|15 : acaatcAATAAACTAATATAGTGTTACGTGAT----TACA--TG--AA----CTCGTTAATAAAC-AT-AG-----CAAATGTACATATAGTCTGTGTGTAGA-AAA-AA-GAG--TATACTC-----------ACCAT--CATT-----ACT---AAGTTCTTCGTTGTGTTTT-TTCCTCGTCAA---------------A-TT-CC---------G-------TGGCAGAATCTG---------AGC--A-AAA--TA-AATTAA---CGGT---TA-------CTACGACT-AAA--TATTTTG----GAACTGAAGTT-ATTTATTGATTGCA------TTCAACAGTATTCACTGAAACGAAAATGT-CTCAC--ACGTCTATCTTCATATGGTATTTT-----ACCTAATTTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGTAATATTCCTAGCCATTCTGTacataaaaatattttgagtgaaagtaaaaaacaaca
gi|19 : tAATAAACTAATATAGTGTTACGTGAA----CACT--TA--AA----CTCGTAAATAAACATC-GTACATGT--ACGTAT----AATATATTT-TA-A-AAA-TA-GAG--TA----T-----------AC--T--CACC-----AC--------------------------CCTTGTTGT---------------A-TT--T---------AAATTTCTTGACACAATCTGA--------TAC--A-AAA--TA-AATAAA---AGGTAATTG---ATA-CTAC-GCA-AAA--TATAT-T----GGAATGC---T-ATTTATTGATTGCT------TTAAAAAATATTTAATGAAACGAAAAAGA-CACAT--ACATTTT-CTTCATATGGTATTTT-----ACTT--ATTTCAAATGGAAAAGAACACGAC----TATGTAGTCGGTAATATTCCTTGCCATTtt
gi|26 : AATAAACTTATACAACGTTACGTAAA----TAAA--TG--AA----CACGTAAATACAC-AT-AT-----T--ACGTAT----AGTCTATGCGTAGA-AAA-AAAGAG--TAAA--C-----------CA--G--CATT-----ACT---A----------------TT-TTTCTCTTTGT---------------A-TT-TT---------A-------TGACAGAATCTGAGCAAAATCTGAGCA-AAA--TA-CATTTA---TGGT---T----ATTTATACTAC
gi|24 : ATAAACTAATATAGTGTTACGTTTT----TACA--TG--AA----CTCGATAATAAAC-AT-AT-----T--ACGTAT----AATCTGTGTGTAGA-AAA-TA-GAG--TATA--CTCACCACCATTAC--T--CATTTCCTCGTTGGGA----------------TT-TTTCTCGTCAA---------------A-TTCAT-----------------TGGCAAAATCTG---------AGC--A-AAA--TATATTT-A---TGGT---TA-------CTACGACT-TAA--TATTTTG----GAATTGAAGTT-ATTTATTGATTgatta
gi|23 : CTAATATAGTGTTACGTGAACACTTAAA--T----------TCGTAAATAAAC-ATAGTACATAT--ACGTAT----AGTCTATGTGTAAATAAA-CA-GAG--TA----T-----------AC--T--TACC-----ACT---G----------------TTGTTGCTT-TTAC---------------A-TT-TC---------T-------TGACACAGTCTG---------AAGC-A-AAA--TA-AATAAA---TGGT---AATTTATAT-TACGACA-AAA--TATATCG----GAACTGAAGTT-ATTTATTGATTGCT------TTCAAAAATATTTACTGAAACGAAAAGGA-CACattt
gi|17 : aaAATATAGTGTTTCGTGAA----TACA--TA--AA----TTCGTTAATAAAC-CT-A--------------------------GTGTAGG-AAA-TA-GAGGATACA--G-----------ACCAT--CATT-----ACT---A----------------TT-TTCCTCCTTAT---------------C-TT-TTTCCTCGTCAACTTCCT-TGGCAGAATCTG---------AAGC-A-AAA--TA-GTTTAA---TAGA---TA----TATATAAAAC--GAA--TACATATTTTAGAACTGAAGTT-ATTGTTTGATTTCT------TTCAACAGTATCCGCTGAAACGAAAATGATGACATAAACGTTTATCTTCATATGGTA-TTTTACTTACATGAATTTCAAATCGAAAAGAACAAGAATAATTATGTAGTCAGCAATTTTCCTAGCCATTCTGT
gi|20 : AATATAGTGTTACTTGAACTCTTAAA------------CTCGTAAATAAAC-ATAGTACATGT--ACGTAT----AATCTATGTGTAAA-AAAATA-GAG--TA----T-----------AC--T--CA--------CC---A----------------T----CCTTGTTGC---------------ACTT-AC---------A-------TT------TCTT---------TAC--ACAAAGGTA-ACTTA-----------------TA-CGACGACA-AAA--TATAT-T----GGAATGAAAGTTATTTATTGATTGCT------TTCAA-AATATTTACTGAAACGAAAAGGA-CACAT--ACATTTT-CTTCATATGTTTTTTTTAC-----TTATTT--AAATGGAAAGGAACAAGAA----TATGTAGTTGGTAATATTTCTAGCCATTt
gi|18 : AGTGTAACGCAAT----TACA--TG--AA----CTCGTTAATAAAC-AT-AG-----T--AAGTAT----AGTCTGTGTGTAGA-AAA-TA-GAG--TATA--CTC---------AC--CACCATT-----ACT---A----------------TT-TTCCTCGTTGTGATTTTCCTCGTCAAA-TT-CC---------A-------TGGCAGACTCTG---------AGT--A-AAA--AA-AAATAA---TGGT---TA-------CTTTGACT-AAA--TATTTTG----GAATTAAGGTT-ATTCATTGATTGCT------TTCAACAATATTCACTGAAACGAAAATGA-CTAAC--ACGTCTATCTTTATATGGTA-TTCTACTTACATGATTTTCAAATCGAAAGGAACAAGAA----TATGCAAACGACAATATTCCTAGCCATT
gi|11 : gtgatgtGTTACGTGAA----TAAATGTG--ATTAAACTCGTTAATAAAC-AT-AA-----T--ACGTAT----AGTCTATGTGT
gi|16 : tttaatatgctaaatcaatataaatgctctatacacttttgcaattaaaatgcatatgcaccgtatctttgagacatactcttaaatgtaggtaagtaaatactgaccattattcaaatgtcctataaattgtataaaactatatctgaaacatatatgcatatacacagtcaagcatgcagcagacacaatatttttaaataacttactcaatttaatgccttgtggaatgtcgtctttcgtttcttttattaaaggactatgtttttcatttttcggatctgcgaaataaatataaaacaatataaacggttataggagcaacattatacaaaaacagagacagatactcaccgatatatgtatacataaggacatagaaaattcatggagagcaaattgtcgggaagcaagaagatatacaagacagacaggtggcatatagacattaacggataggcagccagacgataatcgttgatagacgccaatatctagccgctaacaacacacatgcacatacagaaacaataactatgtatgactgtaactatttatcaaataaattctattttaacgccaggataactacaccaataatatatgtatataactaagctgatacagattacacaaacaacacacatcattgattaatgatcgaaattacgaccgtacgattgtggatccgacGTTACGTGAA----TAAA--TGTGATTAAACTCGTTAATAAAC-AT-AA-----T--ACGTAT----AGTCTATGTGTAGA-AAA-TA-GAG--CAAA--C-----------CC--T--CATT-----ACT---A----------------TT-TTCCTCGTTGT---------------A-TT-TT---------A-------TGACAGAATCTG---------TGA--A-AAA--TA-AATTAA---TGGT---------TATTTA-TACT-AAGACTATATATTA--GAATT-----T-ATTTCTTGATTGCTTTAAAGTTTAACAATGTTCATTGAAACGAAAAGGG-TACAG--ACGTCTATCTTTATATGGCATTTTTATTAACAGGAATTTCAAATCGAAAGGAACAAGAA----TACGTAGTCGGCAATATTCCTAGCCATTCTGTATA
gi|27 : cTTGAAGCT-ATTTATTAATTGCT------TTCTAAAGTATTCGTTGAAACGAAAAGGA-CACAC--GCGTTTATCTTCATATGGTATTTTTATTTACATGAATTTCAAATCGAAAGGAACAACAA----TATGTTGTCGGCACTATTCCTTGCCATTCttactcaaatgct
gi|29 : -ATTTATTGATTTAT------TTCAACAGTATGTATTG---C----------ACAG--AAGTCTATCTTCATATGGTATATTTACTTACATGAATTTCTAATCGAAAGGAACAAGAA----TATGTAGTCGGCACTATCCCTAGCCATTTTGT
gi|32 : GTATTCACTGAAACAAAAATTG-CTCAC--ACGTCTATCTTCATATGGTA-TTTTACTTACATGATTTTCAAATCGAAAGGAACAttct
gi|33 : AACAAGAA----TATGTAGTTGTCAATATCCTCT-CCAT
gi|36 : tatACAAGAAGA--TATG--GTCAGTAATATCCCCAGCCATTGGGTATggagtatattactcagatgttatgcgttctgaaact
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|25 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTATTTTTGAAAATGACTTTCTGCAATAATTTCTTATGTAGTGCAGAAAGACATTTTTATCGCACTGTAAATCAACCGATATTTAATAGTTACCACTGAATCTTGCTAATAAATGGCTGTTTGAATGTGTTAAT
Unaligned ( gi|35 ): GAATACGAAGACATAGTAGACAATATTTCCAACCATAATGTATTTTGTTCGGATGGTTTGAGTTCTG
Unaligned ( gi|37 ): ACATGCACGTACACTGAACGTTTTATCAGACAATACTGTGGAAT
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 2222222 111111111111 1111111111 6666666666666666666666666666666666666666666666666666666666666 222222222222222222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555 222 1111111111 111111 1 22222222222222222 1111 1111 111 1111111 2222 11 111111 1111111 111111 222222222222222 222222222222222 777777777777777777777777 111 5555555 1
lowQualScore : 8888888888888 1111111 2 2 5 2 222222222222 33 8888888 0000000000 1 1 33 2 2 5 1 33 2 9999999999999999999999999999999999999999999999999999999999999 6666 33 55 0 555 3 6 3 666666 444444444444444444 555 1 6666 888888 77777777777777777777777777777777777777777777777777777777777777777777777777777777777 2 3 2 999 44 6666666666 111111 3 3 3 22222222222222222 999999 4444 88888 3 555 3 4 3 3 7777 4 33 33 8888888 33 3 2 000 3 55 2222222 6666 3 555 1 3 1111 0 0 00 0 1 777777 555 6666666 777777 3 3 3 1 999999999999999 3 000000000000000 3 222222222222222222222222 111 999999 88888 555 555 1111111 1 666 0 22 2 0 999999 0 6666 0 3 0 6666
lowQualScore : ............. ....... . . . . ............ .. ....... .......... . . .. . . . . .. . ............................................................. .... .. .. . ... . . . ...... .................. ... . .... ...... ................................................................................... . . . ... .. .......... ...... . . . ................. ...... .... ..... . ... . . . . .... . .. .. ....... .. . . ... . .. ....... .... . ... . . .... . . .. . . ...... ... ....... ...... . . . . ............... . ............... . ........................ ... ...... ..... ... ... ....... . ... . .. . . ...... . .... . . . ....
lowQualScore : 5555555555555 4444444 9 0 3 0 888888888888 44 1111111 9999999999 5 1 66 5 7 0 0 77 7 9999999999999999999999999999999999999999999999999999999999999 1111 99 22 9 222 1 2 1 888888 222222222222222222 444 0 5555 888888 33333333333333333333333333333333333333333333333333333333333333333333333333333333333 9 5 7 666 22 7777777777 999999 3 8 3 66666666666666666 666666 2222 33333 3 444 1 5 1 1 9999 7 99 99 7777777 99 8 7 777 6 66 1111111 5555 1 444 0 3 8888 5 3 22 5 0 777777 444 3333333 777777 3 3 3 0 777777777777777 3 888888888888888 3 777777777777777777777777 000 666666 33333 888 888 5555555 0 444 5 00 0 8 666666 4 2222 2 4 4 5555
consensus : TAAATGCTATAT------A------CAA------TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNA--A-TAACTTA----TT----CCA-------TTC----CCTTGTCGAA------T---------AN------TC----G--CTTCATTTGTANAAGG--NA-T-ACGTT-CTTCATNC----AACG-----------------GA---TCTGAGNA----ATA------AAT----------A-------------T-A----A---A--------A--G-----------A-----------------------ACATCATGT-AAAATAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGAG-AGC--ATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGTAGA----CA----TA------TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA------CA------C--ATA------CA----GA-----AACAA-GTACTATGTATAACTGTAACTATTTA---TCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATATA-------TGTATATAA--CTAAGGTGATACAGATTACACA-AAC--AACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAA---TGG---TTA---ATA-CTACGACTAA---ATATATTGGAATTGAAGTTATTTATTGATTGCTTT------CAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
Reference ( family-6834 ) : TAAATGCTATAT------A------CAN------TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTAAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNA--A-TAACTTA----TT----NCA-------TTC----CNTTGTCGAA------T---------AN------TC----G--CTTCATTTGTANAAAG--NA-T-ACGTT-CTTCATNC----AACG-----------------GA---TCTGAGNA----ATA------AAT----------A-------------T-A----A---A-----------------------A-----------------------ACATCATGT-AAAATAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGG-G-AGC--ATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGTAGA----CA----TA------TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA------CA------C--ATA------CA----GA-----AACAA-GTACTATGTATAACTGTAACTATTTA---TCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATATA-------TGTATATAA--CTAAGGTGATACAGATTANACA-AAA--AACACATNTCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-AC-ANGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATANATG------AACTCGTTAATAAACA---TA------NTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTANA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAA---TGG---TTA---ATATCTACGACNAA---ATATATNNGAATTGAAGTTATTTATTGATTGCTTT------CAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
gi|1 : TAAATGTTATAT------A------CAA------TTTTGCAATTAAAA-TATATTTGCACCGTAACTT-TGATATATACACTTCAATGTAGGGAAA-AGACATTGGCCATTATTCAAATGTCTGATAATTTGTT------------TAA--TT-------AT----------ATCTGAATTTTATATGCCAATACACAGTCAAGCATGCATGCCCGCAGATAGGTTTAACA-ATCA-GAAACAATAATTGTTG--A-TAACTTA-----------CC-------TGG----CTTAG--GAA------G---------AA------AC----A--ATGTATTTCTACGAGG--AA-T-ACTTT-CTTTATTT----AACC-----------------GA---TCTGAGTA----ATA------AAT----------A-------------T-A----A---A-----------------------ACAATATCAACGGGTATAAGAGCAACATCATGT-AAAATAGAGACAGATACCAACTGGCATGTGTTTACACAAGGACAAAGATGATACATGGTG-AGC--ATTATGTTGAGCATCAGGAAGAGATTCAAGGGAGACAGTTAAA----CA----TA------TAGACATGTGCGGACTGGCAGCCATACGAT-AAATGCCGATAGACGCGACGATCGAGCCGCTAGCA-ACA------CC------C--ATA------CA----GA-----AACAT-GTTCTATGTATAACTGTAACTATTCA---TCAA-ATTAA-T-TA-T-ATTTCAAAGTCA-GATTAC-A--CATAAA--AAATATA-------
gi|1 : cttaaatatgctaaatcaataTAACTATTCATCAAATTAAT------------TATATTT--C-AAAGT----CAGATTACACATAAA--AA---ATATAATTGATTAACGATAGAAATAACGACCG------GAAGATTGTGTATCCGATGTGTCTGCCTGCAAACATTACCGTC----TATATATACATACTTT---AATGTTTTTAGATGGAAATTGATACAGCATA-AC-AA-TGTGTGTTCGCC-TGAAATATTTATTTTAATAACCTAATATAGCATTACGTGAAAAAATG------ATCTCGTTTATAAACA---TA------TTAC------GTATATTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---A--G--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GCAATAT------AA-----AGTAA---TGG---TTATTTGTA-CTACGAAAAA---ATATATTAGAATTGAAAATATCTATTGATTCCTTC------CAACAGTATTTATTGAAACGAAAA-G--GACATATAGGTCTATCTTCATATGGTATTTTTACTTACATAAATTTCAAATCAAAAGGAACAAGAT----CATGTAGTCGGCACTTTCCCTAGCCATTCCGTAattgattaacgatagaaataacgaccggaagattgtgtatccgatgtgtctgcctgcaaacattaccgtctatatatacatactttaatgtttttagatggaaattgatacagcataacaatgtgtgttcgcctgaaatatttattttaataacctaatatagcattacgtgaaaaaatgatctcgtttataaacatattacgtatattctgtgtgtagaaaatagagtaaacaagcattactattttcctcgttgtattttatgacagaatctgtgcaatataaagtaatggttatttgtactacgaaaaaatatattagaattgaaaatatctattgattccttccaacagtatttattgaaacgaaaaggacatataggtctatcttcatatggtatttttacttacataaatttcaaatcaaaaggaacaagatcatgtagtcggcactttccctagccattccgtaacttattcag
gi|10 : cttaaatatgctaaatcaatataaatgttatatacaattttgcaattaaaatatatttgcaccgtaactttgatatatacacttcaatgtagggaaaagacattggccattattcaaatgtctgataatttgtttaattatatctgaattttatatgccaatacacagtcaagcatgcatgcccgcagataggtttaacaatcagaaacaataattgttgataacttacctggcttaggaagaaacaatgtatttctacgaggaatactttctttatttaaccgatctgagtaataaatataaaacaatatcaacgggtataagagcaacatcatgtaaaatagagacagataccaactggcatgtgtttacacaaggacaaagatgatacatggtgagcattatgttgagcatcaggaagagattcaagggagacagttaaacatatagacatgtgcggactggcagccatacgataaatgccgatagacgcgacgatcgagccgctagcaacacccatacagaaacatgttctatgtataactgTGCTATAT------A------AATGTGGAATTTTGCAATCAAAT-TATATATGCACCGTA--TTATGAGACATACTCTTCAATACAGAGAAATAGACATTAATCATTATTTAGATGTCTGATGATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCAGCAGATGGGCGTGACA-ATCA-GACA-AA-AATTT-AA--A-TAACTTACTGCTT----CCA-------ATC----TCTTGTCCAA------TGTCTTC---AT------TC----G--CTTCATTTATAAAAGG--CG-T-ACGTT-CTGCATCC----CACA-----------------TA---TCTTAGAA----ATA------AAT----------ATAAAACAACACTAT-A----A---ACGGTTATAAGAGT----------A-----------------------ACATCATGT-AAACAAGAGACATATA-ACACTAACATATTTATACACAAGGACACAGATAATGCATGGTG-AAC--ATTATATGGGGCATTAGGAAGTGATACAAGACAGACGGGTAGA----CA----TA------TA--CATGTACGTGTAGGCAGCCTGAC-ATGAAACGCCGATAGACGTCACGATCGAGCCGCTGACA-ACA------CA------T--ATA------CACATGGA-----GACAA-A-AGTATGTAAAAGTGTAAATGTTTA---TC---ATT---T-T--T-TTTTT------------ACTA--CATCAA--TAATATA-------AGTATAAAA--GTAAGGTGATACAGATTTAACA-AAC--AACACATCTCATTGAATAACGATCGAAATTACGACC---------TG--TGTGGATCAGATGTGTGTGCTTGCAAACGCTACCGTC----TTTATAAATATAC-TA---ACAGTTTTTAGATGTAAATTTATACTATATA-ACAATGTGTGTGTACGTCTTacttattcag
gi|11 : ctttaatatgcaaaatctatatgctTAAATGCTCTAT------A------CAC------TTTTGCAATTAAAA-TGCATATGCACCGTATCTT-TGAGACATACTCTTAAATGTAGGTAAGTAAATACTGACCATTATTCAAATGTCCTATAAATTGTA------------TAAAACT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGCATGCA-----------------G------CA-GACACAATATTTTTAA--A-TAACTTA----CT----CAA-------TTTAATGCCTTGTGGAA------T---------GTCGTCTTTC----G--TTTCTTTTAT-TAAAG--GACT-ATGTT-TTTCATTT----TTCG-----------------GA---TCTGCGAA----ATA------AAT----------A-------------T-A----A---A-----------------------ACAATATAAACGGTTATAGGAGCAACATTATACAAAAACAGAGACAGATACTCACCGATATATGTATACATAAGGACATAGAAAATTCATGGAG-AGC--AAATTGTCGGGAAGCAAGAAGATATACAAGACAGACAGGT-GG----CA----TA------TAGACATTAACGGATAGGCAGCCAGACGAT-AATCGTTGATAGACGCCAATATCTAGCCGCTAACA-ACACACATGCA------C--ATA------CA----GA-----AACAA-TAACTATGTATGACTGTAACTATTTA---TCAA-ATAAA-T-TC-T-ATTTTAACGCCAGGATAACTA--CACCAA--TAATATA-------TGTATATAA--CTAAGCTGATACAGATTACACA-AAC--AACACACATCATTGATTAATGATCGAAATTACGACCG------TACGATTGTGGATCCGACGTtttat
gi|11 : tttaatatgctaaatcaataCGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTtacgtgaataaatgtgattaaactcgttaataaacataatacgtatagtctatgtgt
gi|12 : tttaatatgctaaatcaatataaatgctctatacacttttgcaattaaaatgcatatgcaccgtatctttgagacatactcttaaatgtaggtaagtaaatactgaccattattcaaatgtcctataaattgtataaaactatatctgaaacatatatgcatatacacagtcaagcatgcagcagacacaatatttttaaataacttactcaatttaatgccttgtggaatgtcgtctttcgtttcttttattaaaggactatgtttttcatttttcggatctgcgaaataaatataaaacaatataaacggttataggagcaacattatacaaaaacagagacagatactcaccgatatatgtatacataaggacatagaaaattcatggagagcaaattgtcgggaagcaagaagatatacaagacagacaggtggcatatagacattaacggataggcagccagacgataatcgttgatagacgccaatatctagccgctaacaacacacatgcacatacagaaacaataactatgtatgactgtaactatttatcaaataaattctattttaacgccaggataactacaccaataatatatgtatataactaagctgatacagattacacaaacaacacacatcattgattaatgatcgaaattacgaccgtacgattgtggatccgaAATGCTGTAT------A------CAA------ATTTGCAATTAAAA-TACATATGCACCGTAATTT-TGAGACATACTTTTGAATGTAGAAAAATAGACTTTGACCATTATTCAGATGTCTGATAATTTGTT------------TAT--CT-------AT----------ATCTGAATC-TG-ATGCAAATACACAGTCCAGCATGCATGCCCGCAGACGGGCGTGACA-ATCA-GACACAGCAATTTTTT--A-T---TTA----T------CA-------TTT----C-TTG-----------------------------CC----G--CTTTACTTGTAAAAGG--AA-T-ATATA-CTTCATAC----AACG-----------------AA---TCTGAATA----ACA------CAT----------A-------------T-A----G---A-----------------------ACAATTAAAGTGTTTATAAGACG-ACATCATGT-AGAATAGAGACAGACACGCACCGACATATGTTCGCACAAGCACACAGAGATTGCATGG-T--GCTAATTATGTGGAACATCAGAAATAGATACAAGACAGACAGCTAGC----CA----TA------TAGACATGTGCAGATAGGCAGCCAGAC-ATGGAACGCCGATAAACGCCACGATCAAGCCGCT--------------------------TA------CA-------------------ACTATTCATAACTGTAAATATTCA---TCAA-ATTAATT-T--T-ATTTCAACGGCACGATAACTT--TATCA----------------------ATAA--CTAAGGTGATACAGATTAAACA-AAC--AGCACATATCATTGATTAACGATCCAAATTACGACCA------AACGATTGT-GATCCGATGTGTCTGCCTGCAAACACTACCGTA----TTTATATACATGC-TT---AAAGTATTTAGATGGAAATTTATACAATATA-AC-AA-TATGTGTACACTTTGAAATAT
gi|13 : atatgctaaatcactattAATGCTATAT------AAATGTACAAAA----TGTTGCAATTAAAA-TACATATGCACCGTAACTT-AGAGACATACTCTTAAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TCA--CTATATCTGAT----------ATCTGAATCATATATGCAAATACGCAG-CAAGCATGCATGCCCATAGATGAGCGTGACA-ATTT-GACACCGTAATTTTAA--A-TAACTTACTGCTT----CCA-------ATC----TCTAGTCCAATGTCTGT---------AT------TC----G--CTTCATTTGTAAAAGA--CA-T-ACGTC-CTTCATCA----AACG-----------------GA---TCCGAGAA----ATA------AAT----------A-------------T-A----A---AACACAATAAACGGTTATAAGAGCA-----------------------ACATCATGT-AAACTAGAGACAGATACACAATGACATATGTCCACACAAGGACACAGATAATGTACGGAG-AGC--GTTATTTGGGACAGCAGGAAGAGATACAAGACAGACAGGTAG------------A------TAAACATATGCTGATAGGCAACCAGAaac
gi|14 : ctttaatatgctaaatcaatattTGAATGTAGGGAAACAGACATTGGCCATTATTCAGATATCTGATGATTCGTT------------TAA--CT-------AT----------GCCTGTATTATAACTGCAGACACACTGCCAAGAAAGCATAGCGGCAGA------TGAAATATCA-GACAAAATAACTATTA--A-TAACTTA----CTGTTGTCA-------CTC----TCTCGTTGAA------A---------AA------TC-------CT--ATGTGGAAAAAGTTTA-T-TCGCTGCTTCACGCATTAAACGCCAATAAAATTTATCCAGAGGCTCTGAGAA----ATA------AAT----------A-------------T-ACGACA---ACATAAACGGTTATAAGAGC----A-----------------------ACATCATGT-AAAATAGAGACAGATACGAACCGACATATACTCGCACAAGGACAAAGATt
gi|15 : atgtaaccatagatatatatgtgataTAATAAACTAATATAGTGTTACGTGATTACATG------AACTCGTTAATAAACA---TAGCAAATGTAC------ATATAGTCTGTGTGTAG-A-AAA-AAGAGTATACTC--A---CCAT--CATTACTAAG-T---------------TCTTCGTT-GTGTTTTTTCCTCGTCAAATTCCG-------TGGCAGAATCTG-A-GCAAAAT------AA-----ATTAA---CGG---TTA-------CTACGACTAA---ATATTTTGGAACTGAAGTTATTTATTGATTGCATT------CAACAGTATTCACTGAAACGAAAA-T--GTCTCACACGTCTATCTTCATATGGTA-TTTTACCTA-AT---TTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGTAATATTCCTAGCCATTCTGT
gi|16 : CGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGCAAA--C--C---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GAAAAAT------AA-----ATTAA---TGG---TTATTTATA-CTAAGACTA-----TATATTAGAATT-----TATTTCTTGATTGCTTTAAAGTTTAACAATGTTCATTGAAACGAAAA-G--GGTACAGACGTCTATCTTTATATGGCATTTTTATTAACAGGAATTTCAAATCGAAAGGAACAAGAA----TACGTAGTCGGCAATATTCCTAGCCATTCTGTATAtt
gi|17 : AATATAGTGTTTCGTGAATACATA------AATTCGTTAATAAAC-----------------------------CTA-GTGTAG-G-AAA-TAGAGGATA--C--AGACCA-T--CATTACTATT-T---------------TCCTCCTT-ATCTTTTTCCTCGTCA-------ACTTCCT-TGGCAGAATCTG-AAGCAAAAT------AG-----TTTAA---TAG---ATA----TATATAAAACGAATACATATTTTAGAACTGAAGTTATTGTTTGATTTCTTT------CAACAGTATCCGCTGAAACGAAAATGATGACATAAACGTTTATCTTCATATGGTA-TTTTACTTACATGAATTTCAAATCGAAAAGAACAAGAATAATTATGTAGTCAGCAATTTTCCTAGCCATTCTGTttactcaaatgct
gi|18 : TGATGTAGTGTAACGCAATTACATG------AACTCGTTAATAAACA---TA------GTAA------GTATAGTCTGTGTGTAG-A-AAA-TAGAGTATA--CTCA---C--CACCATTACTATT-TTCCTCGTTGTGATTTTCCTCGTC-AAATTCC----------------A-------TGGCAGACTCTG-A-GTAAAAA------AA-----AATAA---TGG---TTA-------CTTTGACTAA---ATATTTTGGAATTAAGGTTATTCATTGATTGCTTT------CAACAATATTCACTGAAACGAAAA-T--GACTAACACGTCTATCTTTATATGGTA-TTCTACTTACATGATTTTCAAATCGAAAGGAACAAGAA----TATGCAAACGACAATATTCCTAGCCATTt
gi|19 : gAATAAACTAATATAGTGTTACGTGAACACTTA------AACTCGTAAATAAACATCGTACAT---GTAC------GTATAATATAT-TTTA--A-AAA-TAGAGTAT------A---C--T--CACCAC----------------------CCTTGTT-GTATTTA----------------AATTTCT-TGACACAATCTGAT-ACAAAAT------AA-----ATAAA---AGGTAATTG---ATA-CTACG-CAAA---ATATATTGGAAT----GCTATTTATTGATTGCTTT------AAAAAATATTTAATGAAACGAAAA-A--GACACATACATTT-TCTTCATATGGTA-TTTTACTT------ATTTCAAATGGAAAAGAACACGAC----TATGTAGTCGGTAATATTCCTTGCCATT
gi|2 : TAAATGCTATAT------G------CAT------TTTTGAAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTCAATGTAAAGAAAAAAATGTTGACCATTATTCAAATGTCTGATAATTGGTT------------TAA--CT-------AT----------ATCTGAATTATATATGCAAATTCACAGTCAAGCATGCATGCCCGCAGAAGGGTTTAATA-ATCA-GAAACAATAATTTTTA--A-TAACTTG----TT----ACA-------TTC----CATTGTCGAA------T---------AG------TC----G--CTTGATTTGTACAAAG--AA-T-ATGTT-CTTCATTC----AACG-----------------AA---TCTGAGTA----ATA------AAT----------A-------------T-A----A---A-----------------------A------------------------CACCGTGT-AAAATAGAAACAGATACACATCGGCATGTGTTCACACAAGGACACAGATAATGCATG----AGT--ATAATGCGGTGCATCAGTAAGAGATACATGACAGACAGGTAGA----TA----TA------TAGACATGTGCGGAAAGGCAGCCAGACTATGAG-CGCCGATAGACGCGGAGATCAAATCACTATCA-ACA------CA------C--ATA------CA----GA-----AACAA-GTACTATGTATAACTGTAACTATTTA---TCAA-ATTAA-T-G--T-ATGTCAACGCCAGGATAACTA--CATCAA--TAATATA-------TGTATATAA--CTAAGGTGATACAGATTACACA-AAAGAAACACATATCATTGATTAACGAACGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTAGCTGCAAACGCTACCGTC----TATATATGCGTTC-TT---ATAGTTTTTAGATGGAAATTGATACAGTATA-AC-AT-TGTATGAACGCGTTGAAATATTT-CTTCAATAATCTAATAAAGAGTTACGTGAATAAATG------ATCTCGTTTATAAACT---TG------TTAT------GTACAGTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---C--T--CATTGCTATT-T---------------TCCTCGTT-GTATTAT----------------A-------TGACAGAATCTG-T-GGAAAAT------AA-----CTTAA---TGG---TTA---ATATCTACTACTAA---ATATATATGAATTGAAAATATTTATTGATTTCTTT------CAACAGTATTAATTAAAACGAAAA-G--GAAACACACGTCTAACTTAATATGGTATTTTTACAGACATGAATTGCAAATCGATAGGAACAAGAA----TATGAAGTCGGCAATATCCCTTGCCATTCTGTATA
gi|20 : AATATAGTGTTACTTGAACTCTTA------AACTCGTAAATAAACA---TA------GTACATGTACGTATAATCTATGTGTAA-A-AAAATAGAGTATA--C--------------TCACCAT-------------------CCTTGTT-GCACTT---------------------------ACATT-TCTT-T-ACACAA--------A-----GGTAA---C-----TTA----TA-CGACGACAAA---ATATATTGGAATGAAAGTTATTTATTGATTGCTTT------CAA-AATATTTACTGAAACGAAAA-G--GACACATACATTT-TCTTCATATGTTTTTTTTACTTA-------TTTAAATGGAAAGGAACAAGAA----TATGTAGTTGGTAATATTTCTAGCCATT
gi|21 : TAACTGTAACTATTTA---TCAA-ATTAA-TAC--T-ATTTCAACGCCACCATAACTT--CATCAA--TTTTATA-------TGTATTTTA--G-AAGGAGATACAGGTTTAACA-AAC--AACACATCTCATTGAA-AACGCTCGAAATTACGACCT------A-----TGTGGATCCGATGTGTGTGCTTGCAAACACTACCGTC----TATACAAACATAC-TA---AAAGTTTTTAGATGGAAATTTAATCAATATA-ACAATGTGCGTGTACGCCTTGTAAT------TTAAATAA
gi|22 : TAAATGCTCTTT------A------CAA------TTGTGCAATTAAAA-TACACATGCACCGTATTTT-TGAAACATACT--TAATTGTAGGGAAGTAGACATTGACCATTATTCAAATGTCGTATAAATTGAT------------TAA--CT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGTATGC-----------------------GTCA-GACACAATAATTTTAA--A-TAACTTA----CTGAAATTA-------TTG----CCTTGTGAAA------T----------G------TC----GTATTTCATTtattg
gi|23 : ctttaatatgctaaatcaataAACTAATATAGTGTTACGTGAACACTTA------AATTCGTAAATAAACA---TA------GTACATATACGTATAGTCTATGTGTAA-ATAAA-CAGAGTATA--C---------T--TACCACTGTTGT---------------TGCTT-TT-ACATTTC----------------T-------TGACACAGTCTG-AAGCAAAAT------AA-----ATAAA---TGG---TAATTTATAT-TACGACAAA---ATATATCGGAACTGAAGTTATTTATTGATTGCTTT------CAAAAATATTTACTGAAACGAAAA-G--GACACccatttatt
gi|24 : ATAAACTAATATAGTGTTACGTTTTTACATG------AACTCGATAATAAACA---TA------TTAC------GTATAATCTGTGTGTAG-A-AAA-TAGAGTATACTC--A---CCAC--CATTACTCAT-T---------------TCCTCGTTGGGATTTTTCTCGTC---------AAATTCATTGGCAAAATCTG-A-GCAAAAT------AT-----ATTTA---TGG---TTA-------CTACGACTTA---ATATTTTGGAATTGAAGTTATTTATTGATTATTT
gi|26 : AATAAACTTATACAACGTTACGTAAATAAATG------AACACGTAAATACACA---TA------TTAC------GTATAGTCTATGCGTAGAA-AAA-AAGAGTAAA--C--C---A--G--CATTACTATT-T---------------TTCTCTTT-GTATTTT----------------A-------TGACAGAATCTG-A-GCAAAATCTGAGCAAAATACATTTA---TGG---TTATTTATA-CTACGATTA
gi|27 : TTGAAGCTATTTATTAATTGCTTT------CTAAAGTATTCGTTGAAACGAAAA-G--GACACACGCGTTTATCTTCATATGGTATTTTTATTTACATGAATTTCAAATCGAAAGGAACAACAA----TATGTTGTCGGCACTATTCCTTGCCATTC
gi|28 : TAGATACTATATTAGTTCA------GAA------TTTTGCATTTAAAA-TAAAAATGCACCATAGCTT-TTAGACATACTCTTAAAGGTAGAGAAATATACATTGACTATTATTCAGATGTCTGATAATTTG
gi|29 : tttaatatgcttaatcaataATTTATTGATTTATTT------CAACAGTATGTATTG---------------CACAGAAGTCTATCTTCATATGGTATATTTACTTACATGAATTTCTAATCGAAAGGAACAAGAA----TATGTAGTCGGCACTATCCCTAGCCATTTTGT
gi|3 : TAAATGTTATAT------A------CAA------TTTTGCAATTAAAAATACATATGCAACGAAACTT-TGAGACATACTCTTCAATGTTGGGAAATAGATATTGACCATTATTCAAATGTCTGATAATTTGTT------------TAC--CT-------AT----------AT-------------GCACATACAAAGTTAAGCGTGCATGCCCGCAGATGGTCGTGACA-ATCA-GACACAATCATTTTTA--A-TAATTTA-----------CA-------TTC----CATCGTCGAA------T---------ATCTATAGTC----G--CTTCATTTATACAAGG--AA-T-ATGTT-CT--AT------AA---------------------------GAGCA----A-----------------------------------------------------------------------------------------------CATCATGT-AAAATAGCGGCAGATACGCACTGACATTTATTCACACCAGAACACAGATATTGTATGG-GGAAC--ATTATGTAGGACATCCGAAAGAGACACAAGACAGACAGGTAGAAAGACA----TA------TAGACATGTGCAGATAGTCAGCCAGACGAT-AATCGCCGACAGACGCCACGATCGAGACGCTAACA-ACA------CA------C--AAA------CA----GATAAAGAA-AA-GTATTATATATAACTGTTACTATCTA---TCAA-ATTAA-T-TA-T-ATTTTAACGCCAGGATAACTA--CATCAA--TAATATAATTTTTATGTATATAA--CTAAGGTGATACACATTACACA-AAA--AACACATATCAT------------------ACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGAAAATGCTACCGTC----TAAATATAGATGA-TT---AAAGTTTTAAGACGGAAATTTATATAGTATA-AT----TGTGTATACGCCTTGAAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AAATCGTTTATAAACA---TA------GTAC------GTATAGTCTCTGTGAAG-A-AAA-AAGAGTAAA--C--A---C--T--CATTACTATT-T---------------ACCTCGTT-GTATTCT----------------A-------TGACATAATCTG-T-GCAAAAT------AA-----ATTAAAAGTTA---TTA---ATA-CAACGACTAA---ATATATTAGAATTGAACATATTTATTGATTTCTTT------CAACAGTATGTATTGAAACGAAAA-G--GGCAAACAGGTCTATCTTCATATGATAGTTTTACTTGCATGAATTTCAAATCGAAAGGAACAGGAA----TATGTAGTTGGTACTAACCCTAGCCATTCTGTATAttct
gi|30 : taaatatgattaatcaataACA-ATC--AACAAATATCATCGAATAACGATCGAAATTACGACCT------AATAATTGTGGATCCGA----------TGCAAAAGCTACCATC----TATATATACATAC-ATAAAAATATTTTGAG-TGAAAGTtaactcagatgt
gi|31 : AACAAA-------CGTATATAA--CTGATGCGATAAATATTA-ACC-AAA--CACATATATTATTGATTAATGTTCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTTCCTGCAAATGCTACCaaaaaacaaca
gi|32 : GTATTCACTGAAACAAAAA-T--TGCTCACACGTCTATCTTCATATGGTA-TTTTACTTACATGATTTTCAAATCGAAAGGAACA
gi|33 : AACAAGAA----TATGTAGTTGTCAATA-TCCTCTCCAT
gi|34 : tat------------TAA--CT-------AT----------ATCTGTATCAGATATGCAAATACACCATCAAGTATGCATGCCCGCAGATTGATGTGACA-Aggagtatattactcagatgttatgcgttctgaaact
gi|36 : ACAAGAA----GATATGGTCAGTAATATCCCCAGCCATTGGGTAT
gi|4 : TGTAC------A------TAA------TCTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGACGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCATCAAGCATGCATGCCCGCAGATGGATGTGACA-CTCA-GACA-AATAATTTTAA--A-ACACGTACCGATT----TCG-------TTC----ATTGGTCGAA------TGTAATATCTAA------TC----G--CTTCATTTGTCAAACG--AC-G-ACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTA----ATA------AAT----------A-------------C-A----A---G-----------------------ATAATATCAACGATTATAAGATCAACATCATGT-AAAGTAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAG-AGC--ATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGTAGA----TAGAGATA------TAGACATGTGCGGATAGACAGCCAGAC-ATGAAACCCCGATAGACACCACGATCGAGACGCTGACA-ACA------CAACTATAC--ATA------CA----GA-----AACAA-GTTTTATGTATAATTGTTACTATTTA---TCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTATA-------TTTGTATAA--CTAAGGTGATACACTTTACACA-AAC--AACACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTTTCTGCCTGCAATCGCTTCAGCC----TATATATACATAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATtttacttggatgttctgagt
gi|5 : ctttaatatacttaaacaatatatatactatattaaTGTAC------A------TAA------TTTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGATGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCGTCAAGCATGCATGCCCGCAGATGGATGTGACA-CTCA-GACA-AATAATTTTGA--A-ACACTTACCGATT----TCG-------TTC----ATTGGTCGAA------TGTAATATCTAA------TC----G--CTTCATTTGT-CAAAC--AA-CGACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTATAAAATACAAGATAAT----------A-------------T-C----A---ACGATTATAAGAGC----------A-----------------------ACACCATGT-AAAGTAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAG-AGC--ATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGTAGA----TAGAC-TAA-----TAGACATGTGCGGATAAACAGCCAGAC-ATGAAACCCCGATAGACACCATGATCGAGACGCTGACA-ACA------CA------C--ATATACATACA----GA-----AACAA-GTTTTATGTATAATTGTTACTATTTA---TCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTATA-------TTTGTATAA--CTAAGGTGATACACATTACACA-AAC--AAAACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTATCTGCCTGCAATCGCTACCGCC----TATATATACAAAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATaaaacaaacattgcagtg
gi|6 : tttaatatacttaaacaatatatatactatattaaTAAATGCTATAT------A------CCA------TTTTGTAATTAAAA-TACATATGCACCGTTACTT-TGAGACATACTCTTTAATGTAGAGAAATAGAAATTGACCATTTTTCAGATGTCAGATAATTTGTT------------TAA--CT-------ATCTTTGACTATATATGAATCAGATATGCAAATACACAGTTCAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACA-AATCATTTTAA--A-TAACTT-----TT----TCA-------TTC----CTTTGTCGAA------TGTCTTC---AT------TC----G--CTTCATTTGT-TAAAG--TA-CGACGTT-TTTCAGTC----AACA-----------------AA---TCTCAGTA----ATG------AAT----------A-------------TTA----A---ACAATATTAACGGTTACAAGAGC-A-----------------------ACATCATGT-AAA-TAGAGACAGATACACGCTGACATATGTTCACACAAAGACACAGATAATGCATGGTG-AAC--ATTATGTGGGACATCTGCAAGAGAAGCAAGACAGACAGGTAGATAGACA----TA------GGGACATGTGCGGATTGGCAGCAAGGC-ATAAAACGCCGATAGACGCCACGATCGAGCTGCTAACA-ACA------CA------CCTATA------CAAACAGA-----AACAA-GTACTATGTATAACTGTTTCTTTGTT---TCAA-ATTGA-T-T--TTATTTCAACGCCACGATAACTA--TACCAA--TAATATA-------TGGATATAA--CTAAGGTTATACAGATTAAAAA-ACA--CACACATATCATTGATTAACGATCGAAATTACGACCG------AACGATTGAGGATCCGATG----TGCCTGCAATCGTTACTGCCTATATATATATATATAC-TT---AACGTTTTTAGATGGAAATTTATACAATGTATGC-GACTGTGTGTACGACTTGTATTATgaaaacaaacattgcagtg
gi|7 : tttaatatgcttaatcaataTGAATGCTATAT------A------AATGTAGAATTTTGCAATCAATA-TATATGTGCACCGTA--TTATGAGACATACTCTTCAATGCAGAAAAATAGCCATTGATCATTATTCAGATGTCTGATCATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATACCATTAGATGGGCGTGACA-ATCA--ACACAATAATTTTAA--A-TAACTTACTGCTT----CCAATCTCTTTTC----CATTGTCTTT------T----------T------TC----G--CTTCATTTGTAGAAGG--CG-T-ATGTT-CTTCATCC----GTCG-----------------GA---TCTGAGAA----ATA------AATTTAAAACACTA-------------T-A----A---A-----------------------AGGTTATAAGAGCA----------ATATCATGT-AAACAAGAGATATCTACGCACCGGCATCTGTTCACACAAGGACACAGATAATGCATGG-TTAAC--ATTATGTGTGGCATCAGGGAGAAATACAAGACAGACAGGTAGA----TA----TACGTGTATAGACATGTGCTGATAGACAGCCGGAC-ATGAAACGCCGTTAGACGTCACGAT--AGC----AACACACATT----CA------C--CTA------AA----GA-----AACAAAGTATTATGTGAAAGTGTATATATTTA---TCAA-ATTAA-T-T--TTATTTCAACGTCACGATAAATA--CGTCAG--TAATATA-------TGTATCTAA--GTAAGGTGATACAGATTAAACA-AAC--AACACATCTCATTGAAAAATGATCGAAATTACGACC---------TG--TGTGGATCCAATGTGTCTACCTGCAATCGCCACCGTC----TATATAGACAAAC-TT---AATGTTTTTAGATTAAAATTTATACAATATA-TCAATGTGTGTGTA-GCCTTTTAATATaaaacaaatattgcag
gi|8 : ctttaatatgctaaatatataATGCACCGTAACTG-TGAGATATACTCTAAAATGTAGGGAAATAGACATTGACCATTAGTCAGATGTCTGATAATTTGTTTAACTATTTGTTTAA--CT-------AT----------ATCTAAATCAGATATGGAAATACACAGTCAAGCATGCATGCCCGCA----------ACA-AT----ACACTATA--TTTTA--A-TAAaaaggtattgcagt
gi|8 : ataT----------A-------------T-A----AGAGA-----------------------A-----------------------CCATTATGC-AGCATAGAGGCAGATACACACCGACATATGTATATACAAAAACACATATGATGCATGAAG-AGC--ATGGTGTGGGGTATCAGGAAGAGTAACAAGACAAACAGGTAGA----CT----TA------GAAACATGTGCAGATAAACTGCCAGAC-ATGAAACGCTGATAAACGCCGAGATCGAATCACTATCA-ACA------CACATATGC--ATA------CA----GA-----AACAA-GTGCTTTGTATAACTGTAACTATTTA---TCAA-ATTGA-T-T--TAATTTTAACGCCATGATAAGTA--CATCAA--TGTCATA-------TGTATATAA--ATAGGGTAATACAGATTGCACA-AAC--AACACAT---ATTGATTAACGATCGAAATTACGACCGATCAATAATTATTGTGGATCCGGTATGTCTATCTGCAAACGATACCGTC----TATGTTTACGTAC-TT---AAAGTTTGTAAATGGCCATTTAATCAATATA-ACAATGTGTGTGTACGCCATGTAATATaggaatcttgacaaatacatataaaacaatataatcggttataagagaaccattatgcagcatagaggcagatacacaccgacatatgtatatacaaaaacacatatgatgcatgaagagcatggtgtggggtatcaggaagagtaacaagacaaacaggtagacttagaaacatgtgcagataaactgccagacatgaaacgctgataaacgccgagatcgaatcactatcaacacacatatgcatacagaaacaagtgctttgtataactgtaactatttatcaaattgatttaattttaacgccatgataagtacatcaatgtcatatgtatataaatagggtaatacagattgcacaaacaacacatattgattaacgatcgaaattacgaccgatcaataattattgtggatccggtatgtctatctgcaaacgataccgtctatgtttacgtacttaaagtttgtaaatggccatttaatcaatataacaatgtgtgtgtacgccatgtaatatagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
gi|9 : ataatgcaccgtaactgtgagatatactctaaaatgtagggaaatagacattgaccattagtcagatgtctgataatttgtttaactatttgtttaactatatctaaatcagatatggaaatacacagtcaagcatgcatgcccgcaacaatacactatattttaataaaggaatcttgacaaatacatataaaacaatataatcggtTAAATGAAATAT------A------CAA------TTTTGCAATTTAAA-TAAATATGCACCGTAAGTT-CGAGACATACTCTTAAATGCAGGGAAACATACATT-------ATTCAGATGTCAGATAATTTGTT------------TAA--CT-------AT----------ATTTGAATTAGATATGCAAATACACAGCCCAGCAAGCATGCCAGCAGATGGGGGTGACA--TCAAGACACAATAAGTTTGATGACTAACTGT----TT----CCT-------TTC----TGTTGCCGAAAA----T---------AT------TTCATAA--CTTCATTTGCAAAAGC--CA-T-ACGTT-CTTCATTC----AACG-----------------AA---TCTGAGTA----ATA------AAT----------A-------------TTA----A---ACAGTATATACAGTTATTAGAGC-A-----------------------ACATTATGC-AAACTTGAGACACATACACACCGACATATCTACACACAAGGACATGGATAATGCAAAGAG-GGC--ATTATATGGGGCATCAGGAAGAGATATAAGACAGACAGGTAGA----CA----TA------TATACGTGTACTTGTATGCAACTAGGC-ATGGAACGCCGATAGA--------TCGAGCCGCTAAAA-GTA------CA---------A-A------CA----GA-----AACAA-ATACTATGTATAGCTGCAACTGTTTAATATAAACATT---T-T--T-ATTTCAACGCCAAGATAACAA--CATCAT--TAATATA-------TGCATATAAAACTAAAGTGATAAAGATTAAACA-AAC--AACACATCTCATTGA-TAACGAACGAGATTACGACCG------AACAATTGTAGATCCGATGCGTCTGACTGCAAACACTAACGTC----TATATAAACATAC-TT---AATGTTTTTAGATGGAAATTTAAACAATATA-ACAATGTGTGTGTACGCCTTGTACTATagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTATTTTTGAAAATGACTTTCTGCAATAATTTCTTATGTAGTGCAGAAAGACATTTTTATCGCACTGTAAATCAACCGATATTTAATAGTTACCACTGAATCTTGCTAATAAATGGCTGTTTGAATGTGTTAAT
Unaligned ( gi|35 ): GAATACGAAGACATAGTAGACAATATTTCCAACCATAATGTATTTTGTTCGGATGGTTTGAGTTCTG
Unaligned ( gi|37 ): ACATGCACGTACACTGAACGTTTTATCAGACAATACTGTGGAAT
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 111111 111111111111 1111111111 666666666666666666666666666666666666666666666666666666666 222222222222222222 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 222222 1 222222222222222222222222 111111111 11 1111111 11 111111 1111111 111111 222222222222222 222222222222222 777777777777777777777777 111 3333 1
lowQualScore : 8888888888888 666666 33 2 2 5 1 222222222222 33 8888888 0000000000 1 1 33 2 2 5 2 33 1 999999999999999999999999999999999999999999999999999999999 6666 33 555 1 888 3 3 2 6666 444444444444444444 555 2 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 2 66 2 4 6666 66666 000000 3 3 3 3 44 333333333333333333333333 555555555 3 555 3 4 6 3 77 6 4 33 33 8888888 33 4 2 33 2 3 55 2222222 6666 888 1 3 8 2 0 0 00 0 777777 555 6666666 777777 3 3 3 1 999999999999999 3 000000000000000 3 222222222222222222222222 111 999999 88888 555 555 1 3333 3 0 1 0 888888 0 6666 0 3 0 6666
lowQualScore : ............. ...... .. . . . . ............ .. ....... .......... . . .. . . . . .. . ......................................................... .... .. ... . ... . . . .... .................. ... . ........................................................................................................................................................ . .. . . .... ..... ...... . . . . .. ........................ ......... . ... . . . . .. . . .. .. ....... .. . . .. . . .. ....... .... ... . . . . . . .. . ...... ... ....... ...... . . . . ............... . ............... . ........................ ... ...... ..... ... ... . .... . . . . ...... . .... . . . ....
lowQualScore : 5555555555555 444444 99 9 0 3 0 888888888888 44 1111111 9999999999 5 1 66 5 7 0 7 77 0 666666666666666666666666666666666666666666666666666666666 1111 99 444 0 222 1 1 1 5555 222222222222222222 444 1 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 9 44 7 0 5555 99999 888888 1 3 8 3 66 888888888888888888888888 444444444 3 444 1 5 2 1 77 2 7 99 99 7777777 99 3 7 77 7 9 66 1111111 5555 555 0 3 6 5 5 3 22 5 777777 444 3333333 777777 3 3 3 8 777777777777777 3 888888888888888 3 777777777777777777777777 000 666666 33333 888 888 3 6666 3 5 2 8 888888 4 2222 2 4 4 5555
consensus : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATC-AGACACAATAA-TTT--TNAATAACTTA----TT----CCATTC----CCTT-GTCG--AA------T---------AN------TC----G--CTTCATTTGT---AAAAGG--NAT-ACGTT-CTTCATNC----AACG-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A-T--------------------A--------A------------------G--------------------A----------GC------------------A---AC-ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATACTT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAA---TGG---TTAT-TATA-CTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
Reference ( family-6834 ) : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATC-AGACACAATAA-TTT--TNAATAACTTA----TT----CCATTC----CCTT-GTCG--AA------T---------AN------TC----G--CTTCATTTGT---ANAAGG--NAT-ACGTT-CTTCATNC----AACG-----------------GA---TCTGAGNAATAAA---------------------T-----------------------A-T--------------------A--------A------------------A--------------------A----------G-------------------A---AC-ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGAGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATACTT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAA---TGG---TTA---ATA-CTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
gi|1 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAA-TATATTTGCACCGTAACTT-TGATATATACACTTCAATGTAGGGAAA-AGACATTGGCCATTATTCAAATGTCTGATAATTTGTT------------TAA--TT-------AT----------ATCTGAATTTTATATGCCAATACACAGTCAAGCATGCATGCCCGCAGATAGGTTTAACA-ATC-AGAAACAATAA-TTG--TTGATAACTTA----------CC--TG----GCTTAG--G--AA------G---------AA------AC----A--ATGTATTTCT---ACGAGG--AAT-ACTTT-CTTTATTT----AACC-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A-T--------------------A--------AAACAATATCAACGGGTATA--------------------A----------G-------------------AGCAAC-ATCATGTAAAA-TAGAGACAGATACCAACTGGCATGTGTTTACACAAGGACAAAGATGATACATGGTGAGCATTATGTTGAGCATCAGGAAGAGATTCAAGGGAGACAGTT----AAA----CA------TA-TAGACATGTGCGGACTGGCAGCCATACGAT-AAATGCCGATAGACGCGACGATCGAGCCGCTAGCA-ACA--CC------C--AT------A------CA----G----AAAC-ATGTTCTATGTATAACTGTAACTATT---CATCAA-ATTAA-T-TA-T-ATTTCAAAGTCA-GATTAC-A--CATAAA--AAATA-------TA
gi|1 : cttaaatatgctaaatcaataTAACTATTCATCAAATTAAT------------TATAT--TTC-AAAGT----CAGATTACACATAA--AA-A---ATATAATTGATTAACGATAGAAATAACGACCG------GAAGATTGTGTATCCGATGTGTCTGCCTGCAAACATTACCGTC----TATATATACATACTTT--AATGTTTTTAGATGGAAATTGATACAGCATA-ACAATGTGTGT-T-CGCCT-GAAATATTTATTTTAATAACCTAATATAGCATTACGTGAAAAAATG------ATCTCGTTTATAAACA---TA------TTAC------GTATATTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---A--G--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GCAATAT------AA-----AGTAA---TGG---TTATTTGTA-CTACGAAAAAATATATTAGAATTGAAAATATCTATTGATTCCT------TCCAACAGTATTTATTGAAACGAAAA-G--GACATATAGGTCTATCTTCATATGGTATTTTTACTTACATAAATTTCAAATCAAAAGGAACAAGAT----CATGTAGTCGGCACTTTCCCTAGCCATTCCGTAattgattaacgatagaaataacgaccggaagattgtgtatccgatgtgtctgcctgcaaacattaccgtctatatatacatactttaatgtttttagatggaaattgatacagcataacaatgtgtgttcgcctgaaatatttattttaataacctaatatagcattacgtgaaaaaatgatctcgtttataaacatattacgtatattctgtgtgtagaaaatagagtaaacaagcattactattttcctcgttgtattttatgacagaatctgtgcaatataaagtaatggttatttgtactacgaaaaaatatattagaattgaaaatatctattgattccttccaacagtatttattgaaacgaaaaggacatataggtctatcttcatatggtatttttacttacataaatttcaaatcaaaaggaacaagatcatgtagtcggcactttccctagccattccgtaacttattcag
gi|10 : cttaaatatgctaaatcaatataaatgttatatacaattttgcaattaaaatatatttgcaccgtaactttgatatatacacttcaatgtagggaaaagacattggccattattcaaatgtctgataatttgtttaattatatctgaattttatatgccaatacacagtcaagcatgcatgcccgcagataggtttaacaatcagaaacaataattgttgataacttacctggcttaggaagaaacaatgtatttctacgaggaatactttctttatttaaccgatctgagtaataaatataaaacaatatcaacgggtataagagcaacatcatgtaaaatagagacagataccaactggcatgtgtttacacaaggacaaagatgatacatggtgagcattatgttgagcatcaggaagagattcaagggagacagttaaacatatagacatgtgcggactggcagccatacgataaatgccgatagacgcgacgatcgagccgctagcaacacccatacagaaacatgttctatgtataactgTGCTATAT------A------AATGTGGAA--TTTTGCAATCAAAT-TATATATGCACCGTA--TTATGAGACATACTCTTCAATACAGAGAAATAGACATTAATCATTATTTAGATGTCTGATGATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCAGCAGATGGGCGTGACA-ATC-AGACA-AA-AA-TTT---AAATAACTTACTGCTT----CCAATC----TCTT-GTCC--AA------TGTCTTC---AT------TC----G--CTTCATTTAT---AAAAGG--CGT-ACGTT-CTGCATCC----CACA-----------------TA---TCTTAGAAATAAA---------------------TATAAAACAACACTATAAACGGTTA-T--------------------A--------A------------------G--------------------A----------GT------------------A---AC-ATCATGTAAAC-AAGAGACATATA-ACACTAACATATTTATACACAAGGACACAGATAATGCATGGTGAACATTATATGGGGCATTAGGAAGTGATACAAGACAGACGGGT----AGA----CA------TA-T--ACATGTACGTGTAGGCAGCCTGAC-ATGAAACGCCGATAGACGTCACGATCGAGCCGCTGACA-ACA--CA------T--AT------A------CACATGG----AGAC-AAA-AGTATGTAAAAGTGTAAATGTT---TATC---ATT---T-T--T-TTTTT------------ACTA--CATCAA--TAATA-------TAAGTATAA--AAGTAAGGTGATACAGATTTAACA-AA--CA-ACACATCTCATTGAATAACGATCGAAATTACGACC---------TG--TGTGGATCAGATGTGTGTGCTTGCAAACGCTACCGTC----TTTATAAATATACTA---ACAGTTTTTAGATGTAAATTTATACTATATA-ACAATGTGTGTGTACGTCTTacttattcag
gi|11 : ctttaatatgcaaaatctatatgctTAAATGCTCTAT------A------CA------C--TTTTGCAATTAAAA-TGCATATGCACCGTATCTT-TGAGACATACTCTTAAATGTAGGTAAGTAAATACTGACCATTATTCAAATGTCCTATAAATTGTA------------TAAAACT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGCATGCA-----------------G------C-AGACACAATAT-TTT--TAAATAACTTA----CT----CAATTTAATGCCTT-GTGG--AA------T---------GTCGTCTTTC----G--TTTCTTTTAT---TAAAGG--ACT-ATGTT-TTTCATTT----TTCG-----------------GA---TCTGCGAAATAAA---------------------T-----------------------A-T--------------------A--------A------------------AACAATATAAACGGTTATAGGA----------GC------------------A---AC-ATTATACAAAAACAGAGACAGATACTCACCGATATATGTATACATAAGGACATAGAAAATTCATGGAGAGCAAATTGTCGGGAAGCAAGAAGATATACAAGACAGACAGGT----GG-----CA------TA-TAGACATTAACGGATAGGCAGCCAGACGAT-AATCGTTGATAGACGCCAATATCTAGCCGCTAACA-ACA--CA------C--ATGCACATA------CA----G----AAAC-AATAACTATGTATGACTGTAACTATT---TATCAA-ATAAA-T-TC-T-ATTTTAACGCCAGGATAACTA--CACCAA--TAATA-------TATGTATAT--AACTAAGCTGATACAGATTACACA-AA--CA-ACACACATCATTGATTAATGATCGAAATTACGACCG------TACGATTGTGGATCCGACGTtttat
gi|11 : tttaatatgctaaatcaataCGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTtacgtgaataaatgtgattaaactcgttaataaacataatacgtatagtctatgtgt
gi|12 : tttaatatgctaaatcaatataaatgctctatacacttttgcaattaaaatgcatatgcaccgtatctttgagacatactcttaaatgtaggtaagtaaatactgaccattattcaaatgtcctataaattgtataaaactatatctgaaacatatatgcatatacacagtcaagcatgcagcagacacaatatttttaaataacttactcaatttaatgccttgtggaatgtcgtctttcgtttcttttattaaaggactatgtttttcatttttcggatctgcgaaataaatataaaacaatataaacggttataggagcaacattatacaaaaacagagacagatactcaccgatatatgtatacataaggacatagaaaattcatggagagcaaattgtcgggaagcaagaagatatacaagacagacaggtggcatatagacattaacggataggcagccagacgataatcgttgatagacgccaatatctagccgctaacaacacacatgcacatacagaaacaataactatgtatgactgtaactatttatcaaataaattctattttaacgccaggataactacaccaataatatatgtatataactaagctgatacagattacacaaacaacacacatcattgattaatgatcgaaattacgaccgtacgattgtggatccgaAATGCTGTAT------A------CA------A--ATTTGCAATTAAAA-TACATATGCACCGTAATTT-TGAGACATACTTTTGAATGTAGAAAAATAGACTTTGACCATTATTCAGATGTCTGATAATTTGTT------------TAT--CT-------AT----------ATCTGAATC-TG-ATGCAAATACACAGTCCAGCATGCATGCCCGCAGACGGGCGTGACA-ATC-AGACACAGCAA-TTT--TTTAT---TTA----T------CATT-----TCTT-G-------------------------------CC----G--CTTTACTTGT---AAAAGG--AAT-ATATA-CTTCATAC----AACG-----------------AA---TCTGAATAACACA---------------------T-----------------------A-T--------------------AGAACAATTA------------------A--------------------A----------GTGTTTATAAGAC-------G---AC-ATCATGTAGAA-TAGAGACAGACACGCACCGACATATGTTCGCACAAGCACACAGAGATTGCATGGTGCTAATTATGTGGAACATCAGAAATAGATACAAGACAGACAGCT----AGC----CA------TA-TAGACATGTGCAGATAGGCAGCCAGAC-ATGGAACGCCGATAAACGCCACGATCAAGCCGCT----------------------T------A------CA------------------ACTATTCATAACTGTAAATATT---CATCAA-ATTAATT-T--T-ATTTCAACGGCACGATAACTT--TATCA----------------------AT--AACTAAGGTGATACAGATTAAACA-AA--CA-GCACATATCATTGATTAACGATCCAAATTACGACCA------AACGATTGT-GATCCGATGTGTCTGCCTGCAAACACTACCGTA----TTTATATACATGCTT---AAAGTATTTAGATGGAAATTTATACAATATA-ACAA--TATGTGTACACTTTGAAATAT
gi|13 : atatgctaaatcactattAATGCTATAT------AAATGTACA------AAATGTTGCAATTAAAA-TACATATGCACCGTAACTT-AGAGACATACTCTTAAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TCA--CTATATCTGAT----------ATCTGAATCATATATGCAAATACGCAG-CAAGCATGCATGCCCATAGATGAGCGTGACA-ATT-TGACACCGTAA-TTT--TAAATAACTTACTGCTT----CCAATC----TCTA-GTCC--AATGTCTGT---------AT------TC----G--CTTCATTTGT---AAAAGA--CAT-ACGTC-CTTCATCA----AACG-----------------GA---TCCGAGAAATAAA---------------------T-----------------------A-T--------------------A--------A------------------A--------------------ACACAATAAACGGTTATAAGAGC--------A---AC-ATCATGTAAAC-TAGAGACAGATACACAATGACATATGTCCACACAAGGACACAGATAATGTACGGAGAGCGTTATTTGGGACAGCAGGAAGAGATACAAGACAGACAGGT----AG--------------A-TAAACATATGCTGATAGGCAACCAGAaac
gi|14 : ctttaatatgctaaatcaatattTGAATGTAGGGAAACAGACATTGGCCATTATTCAGATATCTGATGATTCGTT------------TAA--CT-------AT----------GCCTGTATTATAACTGCAGACACACTGCCAAGAAAGCATAGCGGCAGA------TGAAATATC-AGACAAAATAA-CTA--TTAATAACTTA----CTGTTGTCACTC----TCTC-GTTG--AA------A---------AA------TC-------CT--ATGTGG---AAAAAGTTTAT-TCGCTGCTTCACGCATTAAACGCCAATAAAATTTATCCAGAGGCTCTGAGAAATAAA---------------------T-----------------------A-TACGACAACATAAACGGTTATA--------A------------------G--------------------A----------GC------------------A---AC-ATCATGTAAAA-TAGAGACAGATACGAACCGACATATACTCGCACAAGGACAAAGATt
gi|15 : atgtaaccatagatatatatgtgataTAATAAACTAATATAGTGTTACGTGATTACATG------AACTCGTTAATAAACA---TAGCAAATGTAC------ATATAGTCTGTGTGTAG-A-AAA-AAGAGTATACTC--A---CCAT--CATTACTAAG-T---------------TCTTCGTT-GTGTTTTTTCCTCGTCAAATTCCG-------TGGCAGAATCTG-A-GCAAAAT------AA-----ATTAA---CGG---T------TA-CTACGACTAAATATTTTGGAACTGAAGTTATTTATTGATTGCA------TTCAACAGTATTCACTGAAACGAAAA-T--GTCTCACACGTCTATCTTCATATGGTA-TTTTACCTA-AT---TTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGTAATATTCCTAGCCATTCTGT
gi|16 : CGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGCAAA--C--C---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GAAAAAT------AA-----ATTAA---TGG---TTATTTATA-CTAAGACT--ATATATTAGAAT-----TTATTTCTTGATTGCTTTAAAGTTTAACAATGTTCATTGAAACGAAAA-G--GGTACAGACGTCTATCTTTATATGGCATTTTTATTAACAGGAATTTCAAATCGAAAGGAACAAGAA----TACGTAGTCGGCAATATTCCTAGCCATTCTGTATAtt
gi|17 : AATATAGTGTTTCGTGAATACATA------AATTCGTTAATAAAC-----------------------------CTA-GTGTAG-G-AAA-TAGAGGATA--C--AGACCA-T--CATTACTATT-T---------------TCCTCCTT-ATCTTTTTCCTCGTCA-------ACTTCCT-TGGCAGAATCTG-AAGCAAAAT------AG-----TTTAA---TAG---ATATATATA-AAACGAATACATATTTTAGAACTGAAGTTATTGTTTGATTTCT------TTCAACAGTATCCGCTGAAACGAAAATGATGACATAAACGTTTATCTTCATATGGTA-TTTTACTTACATGAATTTCAAATCGAAAAGAACAAGAATAATTATGTAGTCAGCAATTTTCCTAGCCATTCTGTttactcaaatgct
gi|18 : TGATGTAGTGTAACGCAATTACATG------AACTCGTTAATAAACA---TA------GTAA------GTATAGTCTGTGTGTAG-A-AAA-TAGAGTATA--CTCA---C--CACCATTACTATT-TTCCTCGTTGTGATTTTCCTCGTC-AAATTCC----------------A-------TGGCAGACTCTG-A-GTAAAAA------AA-----AATAA---TGG---TTA-------CTTTGACTAAATATTTTGGAATTAAGGTTATTCATTGATTGCT------TTCAACAATATTCACTGAAACGAAAA-T--GACTAACACGTCTATCTTTATATGGTA-TTCTACTTACATGATTTTCAAATCGAAAGGAACAAGAA----TATGCAAACGACAATATTCCTAGCCATTt
gi|19 : gAATAAACTAATATAGTGTTACGTGAACACTTA------AACTCGTAAATAAACATCGTACAT---GTAC------GTATAATATAT-TTTA--A-AAA-TAGAGTAT------A---C--T--CACCAC----------------------CCTTGTT-GTATTTA----------------AATTTCT-TGACACAATCTGAT-ACAAAAT------AA-----ATAAA---AGGTAATTG---ATA-CTACG-CAAAATATATTGGAAT----GCTATTTATTGATTGCT------TTAAAAAATATTTAATGAAACGAAAA-A--GACACATACATTT-TCTTCATATGGTA-TTTTACTT------ATTTCAAATGGAAAAGAACACGAC----TATGTAGTCGGTAATATTCCTTGCCATT
gi|2 : TAAATGCTATAT------G------CA------T--TTTTGAAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTCAATGTAAAGAAAAAAATGTTGACCATTATTCAAATGTCTGATAATTGGTT------------TAA--CT-------AT----------ATCTGAATTATATATGCAAATTCACAGTCAAGCATGCATGCCCGCAGAAGGGTTTAATA-ATC-AGAAACAATAA-TTT--TTAATAACTTG----TT----ACATTC----CATT-GTCG--AA------T---------AG------TC----G--CTTGATTTGT---ACAAAG--AAT-ATGTT-CTTCATTC----AACG-----------------AA---TCTGAGTAATAAA---------------------T-----------------------A-T--------------------A--------A----------------------------------------------------------------------A---AC-ACCGTGTAAAA-TAGAAACAGATACACATCGGCATGTGTTCACACAAGGACACAGATAATGCAT---GAGTATAATGCGGTGCATCAGTAAGAGATACATGACAGACAGGT----AGA----TA------TA-TAGACATGTGCGGAAAGGCAGCCAGACTATG-AGCGCCGATAGACGCGGAGATCAAATCACTATCA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-G--T-ATGTCAACGCCAGGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AAAGAA-ACACATATCATTGATTAACGAACGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTAGCTGCAAACGCTACCGTC----TATATATGCGTTCTT---ATAGTTTTTAGATGGAAATTGATACAGTATA-AC-AT-TGTATGAACGCGTTGAAATATTT-CTTCAATAATCTAATAAAGAGTTACGTGAATAAATG------ATCTCGTTTATAAACT---TG------TTAT------GTACAGTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---C--T--CATTGCTATT-T---------------TCCTCGTT-GTATTAT----------------A-------TGACAGAATCTG-T-GGAAAAT------AA-----CTTAA---TGG---TTA---ATATCTACTACTAAATATATATGAATTGAAAATATTTATTGATTTCT------TTCAACAGTATTAATTAAAACGAAAA-G--GAAACACACGTCTAACTTAATATGGTATTTTTACAGACATGAATTGCAAATCGATAGGAACAAGAA----TATGAAGTCGGCAATATCCCTTGCCATTCTGTATA
gi|20 : AATATAGTGTTACTTGAACTCTTA------AACTCGTAAATAAACA---TA------GTACATGTACGTATAATCTATGTGTAA-A-AAAATAGAGTATA--C--------------TCACCAT-------------------CCTTGTT-GCACTT---------------------------ACATT-TCTT-T-ACACAA--------A-----GGTAA---C-----TTA----TA-CGACGACAAAATATATTGGAATGAAAGTTATTTATTGATTGCT------TTCAA-AATATTTACTGAAACGAAAA-G--GACACATACATTT-TCTTCATATGTTTTTTTTACTTA-------TTTAAATGGAAAGGAACAAGAA----TATGTAGTTGGTAATATTTCTAGCCATT
gi|21 : TAACTGTAACTATT---TATCAA-ATTAA-TAC--T-ATTTCAACGCCACCATAACTT--CATCAA--TTTTA-------TATGTATTT--TAG-AAGGAGATACAGGTTTAACA-AA--CA-ACACATCTCATTGAA-AACGCTCGAAATTACGACCT------A-----TGTGGATCCGATGTGTGTGCTTGCAAACACTACCGTC----TATACAAACATACTA---AAAGTTTTTAGATGGAAATTTAATCAATATA-ACAATGTGCGTGTACGCCTTGTAAT------TTAAATAA
gi|22 : TAAATGCTCTTT------A------CA------A--TTGTGCAATTAAAA-TACACATGCACCGTATTTT-TGAAACATACT--TAATTGTAGGGAAGTAGACATTGACCATTATTCAAATGTCGTATAAATTGAT------------TAA--CT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGTATGC-----------------------GTC-AGACACAATAA-TTT--TAAATAACTTA----CTGAAATTATTG----CCTT-GTGA--AA------T----------G------TC----GTATTTCATTtattg
gi|23 : ctttaatatgctaaatcaataAACTAATATAGTGTTACGTGAACACTTA------AATTCGTAAATAAACA---TA------GTACATATACGTATAGTCTATGTGTAA-ATAAA-CAGAGTATA--C---------T--TACCACTGTTGT---------------TGCTT-TT-ACATTTC----------------T-------TGACACAGTCTG-AAGCAAAAT------AA-----ATAAA---TGG---TAATTTATA-TTACGACAAAATATATCGGAACTGAAGTTATTTATTGATTGCT------TTCAAAAATATTTACTGAAACGAAAA-G--GACACccatttatt
gi|24 : ATAAACTAATATAGTGTTACGTTTTTACATG------AACTCGATAATAAACA---TA------TTAC------GTATAATCTGTGTGTAG-A-AAA-TAGAGTATACTC--A---CCAC--CATTACTCAT-T---------------TCCTCGTTGGGATTTTTCTCGTC---------AAATTCATTGGCAAAATCTG-A-GCAAAAT------AT-----ATTTA---TGG---T------TA-CTACGACTTAATATTTTGGAATTGAAGTTATTTATTGATTATT------T
gi|26 : AATAAACTTATACAACGTTACGTAAATAAATG------AACACGTAAATACACA---TA------TTAC------GTATAGTCTATGCGTAGAA-AAA-AAGAGTAAA--C--C---A--G--CATTACTATT-T---------------TTCTCTTT-GTATTTT----------------A-------TGACAGAATCTG-A-GCAAAATCTGAGCAAAATACATTTA---TGG---TTATTTATA-CTACGATTA
gi|27 : TTGAAGCTATTTATTAATTGCT------TTCTAAAGTATTCGTTGAAACGAAAA-G--GACACACGCGTTTATCTTCATATGGTATTTTTATTTACATGAATTTCAAATCGAAAGGAACAACAA----TATGTTGTCGGCACTATTCCTTGCCATTC
gi|28 : TAGATACTATATTAGTTCA------GA------A--TTTTGCATTTAAAA-TAAAAATGCACCATAGCTT-TTAGACATACTCTTAAAGGTAGAGAAATATACATTGACTATTATTCAGATGTCTGATAATTTG
gi|29 : tttaatatgcttaatcaataATTTATTGATTTAT------TTCAACAGTATGTATTG---------------CACAGAAGTCTATCTTCATATGGTATATTTACTTACATGAATTTCTAATCGAAAGGAACAAGAA----TATGTAGTCGGCACTATCCCTAGCCATTTTGT
gi|3 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAAATACATATGCAACGAAACTT-TGAGACATACTCTTCAATGTTGGGAAATAGATATTGACCATTATTCAAATGTCTGATAATTTGTT------------TAC--CT-------AT----------AT-------------GCACATACAAAGTTAAGCGTGCATGCCCGCAGATGGTCGTGACA-ATC-AGACACAATCA-TTT--TTAATAATTTA-----------CATTC----CATC-GTCG--AA------T---------ATCTATAGTC----G--CTTCATTTAT---ACAAGG--AAT-ATGTT-CT----------------------------------------------------------------------------------------------A-T--------------------A--------A------------------G--------------------A----------GC------------------A---AC-ATCATGTAAAA-TAGCGGCAGATACGCACTGACATTTATTCACACCAGAACACAGATATTGTATGGGGAACATTATGTAGGACATCCGAAAGAGACACAAGACAGACAGGTAGAAAGA----CA------TA-TAGACATGTGCAGATAGTCAGCCAGACGAT-AATCGCCGACAGACGCCACGATCGAGACGCTAACA-ACA--CA------C--AA------A------CA----GATAAAGAA-AAGTATTATATATAACTGTTACTATC---TATCAA-ATTAA-T-TA-T-ATTTTAACGCCAGGATAACTA--CATCAA--TAATATAATTTTTATGTATAT--AACTAAGGTGATACACATTACACA-AA--AA-ACACATATCA------------------TACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGAAAATGCTACCGTC----TAAATATAGATGATT---AAAGTTTTAAGACGGAAATTTATATAGTATA-AT----TGTGTATACGCCTTGAAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AAATCGTTTATAAACA---TA------GTAC------GTATAGTCTCTGTGAAG-A-AAA-AAGAGTAAA--C--A---C--T--CATTACTATT-T---------------ACCTCGTT-GTATTCT----------------A-------TGACATAATCTG-T-GCAAAAT------AA-----ATTAAAAGTTA---TTA---ATA-CAACGACTAAATATATTAGAATTGAACATATTTATTGATTTCT------TTCAACAGTATGTATTGAAACGAAAA-G--GGCAAACAGGTCTATCTTCATATGATAGTTTTACTTGCATGAATTTCAAATCGAAAGGAACAGGAA----TATGTAGTTGGTACTAACCCTAGCCATTCTGTATAttct
gi|30 : taaatatgattaatcaataACA-AT--CA-ACAAATATCATCGAATAACGATCGAAATTACGACCT------AATAATTGTGGATCCGA----------TGCAAAAGCTACCATC----TATATATACATACATAAAAATATTTTGAG-TGAAAGTtaactcagatgt
gi|31 : AACA-------AACGTATAT--AACTGATGCGATAAATATTAACCA-AA--CA--CATATATTATTGATTAATGTTCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTTCCTGCAAATGCTACCaaaaaacaaca
gi|32 : GTATTCACTGAAACAAAAA-T--TGCTCACACGTCTATCTTCATATGGTA-TTTTACTTACATGATTTTCAAATCGAAAGGAACA
gi|33 : AACAAGAA----TATGTAGTTGTCAATA-TCCTCTCCAT
gi|34 : tat------------TAA--CT-------AT----------ATCTGTATCAGATATGCAAATACACCATCAAGTATGCATGCCCGCAGATTGATGTGACA-Aggagtatattactcagatgttatgcgttctgaaact
gi|36 : ACAAGAA----GATATGGTCAGTAATATCCCCAGCCATTGGGTAT
gi|4 : TGTAC------A------TA------A--TCTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGACGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCATCAAGCATGCATGCCCGCAGATGGATGTGACA-CTC-AGACA-AATAA-TTT--TAAAACACGTACCGATT----TCGTTC----ATTG-GTCG--AA------TGTAATATCTAA------TC----G--CTTCATTTGT---CAAACG--ACG-ACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTAATAAA---------------------T-----------------------A-C--------------------A--------AGATAATATCAACGATTATA--------------------A----------G-------------------ATCAAC-ATCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAGA--TA-TAGACATGTGCGGATAGACAGCCAGAC-ATGAAACCCCGATAGACACCACGATCGAGACGCTGACA-ACA--CAACTATAC--AT------A------CA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACTTTACACA-AA--CA-ACACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTTTCTGCCTGCAATCGCTTCAGCC----TATATATACATACTT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATtttacttggatgttctgagt
gi|5 : ctttaatatacttaaacaatatatatactatattaaTGTAC------A------TA------A--TTTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGATGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCGTCAAGCATGCATGCCCGCAGATGGATGTGACA-CTC-AGACA-AATAA-TTT--TGAAACACTTACCGATT----TCGTTC----ATTG-GTCG--AA------TGTAATATCTAA------TC----G--CTTCATTTGTCAAACAACG------ACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTA-TAAAATACAAGATAATATCAACGATT-----------------------A-T--------------------A--------A------------------G--------------------A----------GC------------------A---AC-ACCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAC---TAATAGACATGTGCGGATAAACAGCCAGAC-ATGAAACCCCGATAGACACCATGATCGAGACGCTGACA-ACA--CA------C--AT------ATACATACA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACATTACACA-AA--CA-AAACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTATCTGCCTGCAATCGCTACCGCC----TATATATACAAACTT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATaaaacaaacattgcagtg
gi|6 : tttaatatacttaaacaatatatatactatattaaTAAATGCTATAT------A------CC------A--TTTTGTAATTAAAA-TACATATGCACCGTTACTT-TGAGACATACTCTTTAATGTAGAGAAATAGAAATTGACCATTTTTCAGATGTCAGATAATTTGTT------------TAA--CT-------ATCTTTGACTATATATGAATCAGATATGCAAATACACAGTTCAGCATGCATGCCCGCAGATGGGCGTGACA-ATC-AGACA-AATCA-TTT--TAAATAACTT-----TT----TCATTC----CTTT-GTCG--AA------TGTCTTC---AT------TC----G--CTTCATTTGT----TAAAG--TACGACGTT-TTTCAGTC----AACA-----------------AA---TCTCAGTAATGAA---------------------T-----------------------A-TTAAACAATATTAACGGTTACA--------A------------------G--------------------A----------GC------------------A---AC-ATCATGTAAA--TAGAGACAGATACACGCTGACATATGTTCACACAAAGACACAGATAATGCATGGTGAACATTATGTGGGACATCTGCAAGAGAAGCAAGACAGACAGGT----AGATAGACA------TA-GGGACATGTGCGGATTGGCAGCAAGGC-ATAAAACGCCGATAGACGCCACGATCGAGCTGCTAACA-ACA--CA------CCTAT------A------CAAACAG----AAAC-AAGTACTATGTATAACTGTTTCTTTG---TTTCAA-ATTGA-T-T--TTATTTCAACGCCACGATAACTA--TACCAA--TAATA-------TATGGATAT--AACTAAGGTTATACAGATTA-AAA-AA--CACACACATATCATTGATTAACGATCGAAATTACGACCG------AACGATTGAGGATCCGATG----TGCCTGCAATCGTTACTGCCTATATATATATATATACTT---AACGTTTTTAGATGGAAATTTATACAATGTATGCGAC-TGTGTGTACGACTTGTATTATgaaaacaaacattgcagtg
gi|7 : tttaatatgcttaatcaataTGAATGCTATAT------A------AATGTAGAA--TTTTGCAATCAATA-TATATGTGCACCGTA--TTATGAGACATACTCTTCAATGCAGAAAAATAGCCATTGATCATTATTCAGATGTCTGATCATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATACCATTAGATGGGCGTGACA-ATC-A-ACACAATAA-TTT--TAAATAACTTACTGCTT----CCAATC----TCTT-TTCC--AT------T---------GTCTTTTTTC----G--CTTCATTTGT---AGAAGG--CGT-ATGTT-CTTCATCC----GTCG-----------------GA---TCTGAGAAATAAA---------------------TTTAAAACACT-------------A-T--------------------A--------A------------------A--------------------A----------GGTTATAAGAGC--------A---AT-ATCATGTAAAC-AAGAGATATCTACGCACCGGCATCTGTTCACACAAGGACACAGATAATGCATGGTTAACATTATGTGTGGCATCAGGGAGAAATACAAGACAGACAGGT----AGA----TATACGTGTA-TAGACATGTGCTGATAGACAGCCGGAC-ATGAAACGCCGTTAGACGTCACGAT--AGC----AACACACATTCA------C--CT------A------AA----G----AAACAAAGTATTATGTGAAAGTGTATATATT---TATCAA-ATTAATT-T--T-ATTTCAACGTCACGATAAATA--CGTCAG--TAATA-------TATGTATCT--AAGTAAGGTGATACAGATTAAACA-AA--CA-ACACATCTCATTGAAAAATGATCGAAATTACGACC---------TG--TGTGGATCCAATGTGTCTACCTGCAATCGCCACCGTC----TATATAGACAAACTT---AATGTTTTTAGATTAAAATTTATACAATATA-TCAATGTGTGTGTA-GCCTTTTAATATaaaacaaatattgcag
gi|8 : ctttaatatgctaaatatataATGCACCGTAACTG-TGAGATATACTCTAAAATGTAGGGAAATAGACATTGACCATTAGTCAGATGTCTGATAATTTGTTTAACTATTTGTTTAA--CT-------AT----------ATCTAAATCAGATATGGAAATACACAGTCAAGCATGCATGCCCGCA----------ACA-AT----ACACTATA---TT--TTAATAAaaaggtattgcagt
gi|8 : ata---------------------T-----------------------A-T--------------------A--------A------------------G--------------------A----------G-------------------A---ACCATTATGCAGCA-TAGAGGCAGATACACACCGACATATGTATATACAAAAACACATATGATGCATGAAGAGCATGGTGTGGGGTATCAGGAAGAGTAACAAGACAAACAGGT----AGA----CT------TA-GAAACATGTGCAGATAAACTGCCAGAC-ATGAAACGCTGATAAACGCCGAGATCGAATCACTATCA-ACA--CACATATGC--AT------A------CA----G----AAAC-AAGTGCTTTGTATAACTGTAACTATT---TATCAA-ATTGA-T-T--TAATTTTAACGCCATGATAAGTA--CATCAA--TGTCA-------TATGTATAT--AAATAGGGTAATACAGATTGCACA-AA--CA-ACACAT---ATTGATTAACGATCGAAATTACGACCGATCAATAATTATTGTGGATCCGGTATGTCTATCTGCAAACGATACCGTC----TATGTTTACGTACTT---AAAGTTTGTAAATGGCCATTTAATCAATATA-ACAATGTGTGTGTACGCCATGTAATATaggaatcttgacaaatacatataaaacaatataatcggttataagagaaccattatgcagcatagaggcagatacacaccgacatatgtatatacaaaaacacatatgatgcatgaagagcatggtgtggggtatcaggaagagtaacaagacaaacaggtagacttagaaacatgtgcagataaactgccagacatgaaacgctgataaacgccgagatcgaatcactatcaacacacatatgcatacagaaacaagtgctttgtataactgtaactatttatcaaattgatttaattttaacgccatgataagtacatcaatgtcatatgtatataaatagggtaatacagattgcacaaacaacacatattgattaacgatcgaaattacgaccgatcaataattattgtggatccggtatgtctatctgcaaacgataccgtctatgtttacgtacttaaagtttgtaaatggccatttaatcaatataacaatgtgtgtgtacgccatgtaatatagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
gi|9 : ataatgcaccgtaactgtgagatatactctaaaatgtagggaaatagacattgaccattagtcagatgtctgataatttgtttaactatttgtttaactatatctaaatcagatatggaaatacacagtcaagcatgcatgcccgcaacaatacactatattttaataaaggaatcttgacaaatacatataaaacaatataatcggtTAAATGAAATAT------A------CA------A--TTTTGCAATTTAAA-TAAATATGCACCGTAAGTT-CGAGACATACTCTTAAATGCAGGGAAACATACATT-------ATTCAGATGTCAGATAATTTGTT------------TAA--CT-------AT----------ATTTGAATTAGATATGCAAATACACAGCCCAGCAAGCATGCCAGCAGATGGGGGTGAC--ATCAAGACACAATAAGTTTGATGACTAACTGT----TT----CCTTTC----TGTT-GCCGAAAA------T---------AT------TTCATAA--CTTCATTTGC---AAAAGC--CAT-ACGTT-CTTCATTC----AACG-----------------AA---TCTGAGTAATAAA---------------------T-----------------------ATT--------------------A--------A------------------AC-------------------A----------GTATATACAGTTATTAGAGCA---AC-ATTATGCAAAC-TTGAGACACATACACACCGACATATCTACACACAAGGACATGGATAATGCAAAGAGGGCATTATATGGGGCATCAGGAAGAGATATAAGACAGACAGGT----AGA----CA------TA-TATACGTGTACTTGTATGCAACTAGGC-ATGGAACGCCGATA--------GATCGAGCCGCTAAAA-GTA--CA---------A-------A------CA----G----AAAC-AAATACTATGTATAGCTGCAACTGTTTAATATAAACATT---T-T--T-ATTTCAACGCCAAGATAACAA--CATCAT--TAATA-------TATGCATATAAAACTAAAGTGATAAAGATTAAACA-AA--CA-ACACATCTCATTGA-TAACGAACGAGATTACGACCG------AACAATTGTAGATCCGATGCGTCTGACTGCAAACACTAACGTC----TATATAAACATACTT---AATGTTTTTAGATGGAAATTTAAACAATATA-ACAATGTGTGTGTACGCCTTGTACTATagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTATTTTTGAAAATGACTTTCTGCAATAATTTCTTATGTAGTGCAGAAAGACATTTTTATCGCACTGTAAATCAACCGATATTTAATAGTTACCACTGAATCTTGCTAATAAATGGCTGTTTGAATGTGTTAAT
Unaligned ( gi|35 ): GAATACGAAGACATAGTAGACAATATTTCCAACCATAATGTATTTTGTTCGGATGGTTTGAGTTCTG
Unaligned ( gi|37 ): ACATGCACGTACACTGAACGTTTTATCAGACAATACTGTGGAAT
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111 111111111111 1111111111 666666666666666666666666666666666666666666666666666666666 222222222222222222 99999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 11111111111 222222222222222222222 222222 1 222222222222222222222222 111111111 11 1111111 11 111111 1111111 111111 222222222222222 222222222222222 777777777777777777777777 111 2222222 1
lowQualScore : 8888888888888 666666 33 2 2 5 1 222222222222 33 8888888 0000000000 1 1 33 2 2 5 2 33 1 999999999999999999999999999999999999999999999999999999999 6666 33 5555 3 2 6666 444444444444444444 555 2 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 33333333333 444444444444444444444 66 2 2 6666 66666 000000 3 3 3 3 44 333333333333333333333333 555555555 3 555 3 4 6 3 77 6 4 33 33 8888888 33 4 2 33 2 3 55 2222222 6666 3 555 1 3 8 2 0 0 00 0 777777 555 6666666 777777 3 3 3 1 999999999999999 3 000000000000000 3 222222222222222222222222 111 999999 88888 4444444 0 1 0 888888 0 6666 0 3 0 6666
lowQualScore : ............. ...... .. . . . . ............ .. ....... .......... . . .. . . . . .. . ......................................................... .... .. .... . . .... .................. ... . ........................................................................................................... ........... ..................... .. . . .... ..... ...... . . . . .. ........................ ......... . ... . . . . .. . . .. .. ....... .. . . .. . . .. ....... .... . ... . . . . . . .. . ...... ... ....... ...... . . . . ............... . ............... . ........................ ... ...... ..... ....... . . . ...... . .... . . . ....
lowQualScore : 5555555555555 444444 99 9 0 3 0 888888888888 44 1111111 9999999999 5 1 66 5 7 0 7 77 0 666666666666666666666666666666666666666666666666666666666 1111 99 9999 1 1 5555 222222222222222222 444 8 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 66666666666 333333333333333333333 44 7 1 5555 99999 888888 1 3 8 3 66 888888888888888888888888 444444444 3 444 1 5 2 1 77 2 7 99 99 7777777 99 3 7 77 7 9 66 1111111 5555 1 444 0 3 6 5 5 3 22 5 777777 444 3333333 777777 3 3 3 8 777777777777777 3 888888888888888 3 777777777777777777777777 000 666666 33333 1111111 5 2 8 888888 4 2222 2 4 4 5555
consensus : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATC-AGACACAATAA-TTT--TNAATAACTTA----TT----CCATTC----CCTT-GTCG--AA------T---------AN------TC----G--CTTCATTTGTAAAAGG--AATACGTT-CTTCATNC----AACG-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A-------------------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
Reference ( family-6834 ) : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATC-AGACACAATAA-TTT--TNAATAACTTA----TT----CCATTC----CCTT-GTCG--AA------T---------AN------TC----G--CTTCATTTGTAAAAGG--NATACGTT-CTTCATNC----AACG-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A-------------------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
gi|1 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAA-TATATTTGCACCGTAACTT-TGATATATACACTTCAATGTAGGGAAA-AGACATTGGCCATTATTCAAATGTCTGATAATTTGTT------------TAA--TT-------AT----------ATCTGAATTTTATATGCCAATACACAGTCAAGCATGCATGCCCGCAGATAGGTTTAACA-ATC-AGAAACAATAA-TTG--TTGATAACTTA----------CC--TG----GCTTAG--G--AA------G---------AA------AC----A--ATGTATTTCTACGAGG--AATACTTT-CTTTATTT----AACC-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------TAAAACAATATCAACGGGTATA-------------------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACCAACTGGCATGTGTTTACACAAGGACAAAGATGATACATGGTGAGCATTATGTTGAGCATCAGGAAGAGATTCAAGGGAGACAGTT----AAA----CA------TA-TAGACATGTGCGGACTGGCAGCCATACGAT-AAATGCCGATAGACGCGACGATCGAGCCGCTAGCA-ACA--CC------C--AT------A------CA----G----AAAC-ATGTTCTATGTATAACTGTAACTATT---CATCAA-ATTAA-T-TA-T-ATTTCAAAGTCA-GATTAC-A--CATAAA--AAATA-------TA
gi|1 : cttaaatatgctaaatcaataTAACTATTCATCAAATTAAT------------TATAT--TTC-AAAGT----CAGATTACACATAA--AA-A---ATATAATTGATTAACGATAGAAATAACGACCG------GAAGATTGTGTATCCGATGTGTCTGCCTGCAAACATTACCGTC----TATATATACATACTTT---AATGTTTTTAGATGGAAATTGATACAGCATA-ACAATGTGTGT-T-CGCC-TGAAATATTTATTTTAATAACCTAATATAGCATTACGTGAAAAAATG------ATCTCGTTTATAAACA---TA------TTAC------GTATATTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---A--G--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GCAATAT------AA-----AGTAATGGTTATT-T-GTACTACGAAAAAATATATTAGAATTGAAAATATCTATTGATTCCT------TCCAACAGTATTTATTGAAACGAAAA-G--GACATATAGGTCTATCTTCATATGGTATTTTTACTTACATAAATTTCAAATCAAAAGGAACAAGAT----CATGTAGTCGGCACTTTCCCTAGCCATTCCGTAattgattaacgatagaaataacgaccggaagattgtgtatccgatgtgtctgcctgcaaacattaccgtctatatatacatactttaatgtttttagatggaaattgatacagcataacaatgtgtgttcgcctgaaatatttattttaataacctaatatagcattacgtgaaaaaatgatctcgtttataaacatattacgtatattctgtgtgtagaaaatagagtaaacaagcattactattttcctcgttgtattttatgacagaatctgtgcaatataaagtaatggttatttgtactacgaaaaaatatattagaattgaaaatatctattgattccttccaacagtatttattgaaacgaaaaggacatataggtctatcttcatatggtatttttacttacataaatttcaaatcaaaaggaacaagatcatgtagtcggcactttccctagccattccgtaacttattcag
gi|10 : cttaaatatgctaaatcaatataaatgttatatacaattttgcaattaaaatatatttgcaccgtaactttgatatatacacttcaatgtagggaaaagacattggccattattcaaatgtctgataatttgtttaattatatctgaattttatatgccaatacacagtcaagcatgcatgcccgcagataggtttaacaatcagaaacaataattgttgataacttacctggcttaggaagaaacaatgtatttctacgaggaatactttctttatttaaccgatctgagtaataaatataaaacaatatcaacgggtataagagcaacatcatgtaaaatagagacagataccaactggcatgtgtttacacaaggacaaagatgatacatggtgagcattatgttgagcatcaggaagagattcaagggagacagttaaacatatagacatgtgcggactggcagccatacgataaatgccgatagacgcgacgatcgagccgctagcaacacccatacagaaacatgttctatgtataactgTGCTATAT------A------AATGTGGAA--TTTTGCAATCAAAT-TATATATGCACCGTA--TTATGAGACATACTCTTCAATACAGAGAAATAGACATTAATCATTATTTAGATGTCTGATGATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCAGCAGATGGGCGTGACA-ATC-AGACA-AA-AA-TTT---AAATAACTTACTGCTT----CCAATC----TCTT-GTCC--AA------TGTCTTC---AT------TC----G--CTTCATTTATAAAAGG--CGTACGTT-CTGCATCC----CACA-----------------TA---TCTTAGAAATAAA---------------------TATAAAACAACACTATAAACGGTTA--------------------T--------------------A-------------------AGAG-----------TAAC---------------------ATCATGTAAAC-AAGAGACATATA-ACACTAACATATTTATACACAAGGACACAGATAATGCATGGTGAACATTATATGGGGCATTAGGAAGTGATACAAGACAGACGGGT----AGA----CA------TA-T--ACATGTACGTGTAGGCAGCCTGAC-ATGAAACGCCGATAGACGTCACGATCGAGCCGCTGACA-ACA--CA------T--AT------A------CACATGG----AGAC-AAA-AGTATGTAAAAGTGTAAATGTT---TATC---ATT---T-T--T-TTTTT------------ACTA--CATCAA--TAATA-------TAAGTATAA--AAGTAAGGTGATACAGATTTAACA-AA--CA-ACACATCTCATTGAATAACGATCGAAATTACGACC---------TG--TGTGGATCAGATGTGTGTGCTTGCAAACGCTACCGTC----TTTATAAATATAC-TA---ACAGTTTTTAGATGTAAATTTATACTATATA-ACAATGTGTGTGTACGTCTTacttattcag
gi|11 : ctttaatatgcaaaatctatatgctTAAATGCTCTAT------A------CA------C--TTTTGCAATTAAAA-TGCATATGCACCGTATCTT-TGAGACATACTCTTAAATGTAGGTAAGTAAATACTGACCATTATTCAAATGTCCTATAAATTGTA------------TAAAACT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGCATGCA-----------------G------C-AGACACAATAT-TTT--TAAATAACTTA----CT----CAATTTAATGCCTT-GTGG--AA------T---------GTCGTCTTTC----G--TTTCTTTTATTAAAGG--ACTATGTT-TTTCATTT----TTCG-----------------GA---TCTGCGAAATAAA---------------------T-----------------------ATAAAACAATATAAACGGTTAT--------------------A-------------------GGAG-----------CAAC---------------------ATTATACAAAAACAGAGACAGATACTCACCGATATATGTATACATAAGGACATAGAAAATTCATGGAGAGCAAATTGTCGGGAAGCAAGAAGATATACAAGACAGACAGGT----GG-----CA------TA-TAGACATTAACGGATAGGCAGCCAGACGAT-AATCGTTGATAGACGCCAATATCTAGCCGCTAACA-ACA--CA------C--ATGCACATA------CA----G----AAAC-AATAACTATGTATGACTGTAACTATT---TATCAA-ATAAA-T-TC-T-ATTTTAACGCCAGGATAACTA--CACCAA--TAATA-------TATGTATAT--AACTAAGCTGATACAGATTACACA-AA--CA-ACACACATCATTGATTAATGATCGAAATTACGACCG------TACGATTGTGGATCCGACGTtttat
gi|11 : tttaatatgctaaatcaataCGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTtacgtgaataaatgtgattaaactcgttaataaacataatacgtatagtctatgtgt
gi|12 : tttaatatgctaaatcaatataaatgctctatacacttttgcaattaaaatgcatatgcaccgtatctttgagacatactcttaaatgtaggtaagtaaatactgaccattattcaaatgtcctataaattgtataaaactatatctgaaacatatatgcatatacacagtcaagcatgcagcagacacaatatttttaaataacttactcaatttaatgccttgtggaatgtcgtctttcgtttcttttattaaaggactatgtttttcatttttcggatctgcgaaataaatataaaacaatataaacggttataggagcaacattatacaaaaacagagacagatactcaccgatatatgtatacataaggacatagaaaattcatggagagcaaattgtcgggaagcaagaagatatacaagacagacaggtggcatatagacattaacggataggcagccagacgataatcgttgatagacgccaatatctagccgctaacaacacacatgcacatacagaaacaataactatgtatgactgtaactatttatcaaataaattctattttaacgccaggataactacaccaataatatatgtatataactaagctgatacagattacacaaacaacacacatcattgattaatgatcgaaattacgaccgtacgattgtggatccgaAATGCTGTAT------A------CA------A--ATTTGCAATTAAAA-TACATATGCACCGTAATTT-TGAGACATACTTTTGAATGTAGAAAAATAGACTTTGACCATTATTCAGATGTCTGATAATTTGTT------------TAT--CT-------AT----------ATCTGAATC-TG-ATGCAAATACACAGTCCAGCATGCATGCCCGCAGACGGGCGTGACA-ATC-AGACACAGCAA-TTT--TTTAT---TTA----T------CATT-----TCTT-G-------------------------------CC----G--CTTTACTTGTAAAAGG--AATATATA-CTTCATAC----AACG-----------------AA---TCTGAATAACACA---------------------T-----------------------A--------------------T--------------------AGAACAATT-----------AAAGTGTTTATAAGACGAC---------------------ATCATGTAGAA-TAGAGACAGACACGCACCGACATATGTTCGCACAAGCACACAGAGATTGCATGGTGCTAATTATGTGGAACATCAGAAATAGATACAAGACAGACAGCT----AGC----CA------TA-TAGACATGTGCAGATAGGCAGCCAGAC-ATGGAACGCCGATAAACGCCACGATCAAGCCGCT----------------------T------A------CA------------------ACTATTCATAACTGTAAATATT---CATCAA-ATTAATT-T--T-ATTTCAACGGCACGATAACTT--TATCA----------------------AT--AACTAAGGTGATACAGATTAAACA-AA--CA-GCACATATCATTGATTAACGATCCAAATTACGACCA------AACGATTGT-GATCCGATGTGTCTGCCTGCAAACACTACCGTA----TTTATATACATGC-TT---AAAGTATTTAGATGGAAATTTATACAATATA-ACAA--TATGTGTACACTTTGAAATAT
gi|13 : atatgctaaatcactattAATGCTATAT------AAATGTACA------AAATGTTGCAATTAAAA-TACATATGCACCGTAACTT-AGAGACATACTCTTAAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TCA--CTATATCTGAT----------ATCTGAATCATATATGCAAATACGCAG-CAAGCATGCATGCCCATAGATGAGCGTGACA-ATT-TGACACCGTAA-TTT--TAAATAACTTACTGCTT----CCAATC----TCTA-GTCC--AATGTCTGT---------AT------TC----G--CTTCATTTGTAAAAGA--CATACGTC-CTTCATCA----AACG-----------------GA---TCCGAGAAATAAA---------------------T-----------------------ATAAAACACAATAAACGGTTAT--------------------A-------------------AGAG-----------CAAC---------------------ATCATGTAAAC-TAGAGACAGATACACAATGACATATGTCCACACAAGGACACAGATAATGTACGGAGAGCGTTATTTGGGACAGCAGGAAGAGATACAAGACAGACAGGT----AG--------------A-TAAACATATGCTGATAGGCAACCAGAaac
gi|14 : ctttaatatgctaaatcaatattTGAATGTAGGGAAACAGACATTGGCCATTATTCAGATATCTGATGATTCGTT------------TAA--CT-------AT----------GCCTGTATTATAACTGCAGACACACTGCCAAGAAAGCATAGCGGCAGA------TGAAATATC-AGACAAAATAA-CTA--TTAATAACTTA----CTGTTGTCACTC----TCTC-GTTG--AA------A---------AA------TC-------CT--ATGTGGAAAAAGTTTATTCGCTGCTTCACGCATTAAACGCCAATAAAATTTATCCAGAGGCTCTGAGAAATAAA---------------------T-----------------------A--------------------T--------------------A-------------------CGA------------CAACATAAACGGTTATAAGAGCAACATCATGTAAAA-TAGAGACAGATACGAACCGACATATACTCGCACAAGGACAAAGATt
gi|15 : atgtaaccatagatatatatgtgataTAATAAACTAATATAGTGTTACGTGATTACATG------AACTCGTTAATAAACA---TAGCAAATGTAC------ATATAGTCTGTGTGTAG-A-AAA-AAGAGTATACTC--A---CCAT--CATTACTAAG-T---------------TCTTCGTT-GTGTTTTTTCCTCGTCAAATTCCG-------TGGCAGAATCTG-A-GCAAAAT------AA-----ATTAACGGT--------TACTACGACTAAATATTTTGGAACTGAAGTTATTTATTGATTGCA------TTCAACAGTATTCACTGAAACGAAAA-T--GTCTCACACGTCTATCTTCATATGGTA-TTTTACCTA-AT---TTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGTAATATTCCTAGCCATTCTGT
gi|16 : CGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGCAAA--C--C---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GAAAAAT------AA-----ATTAATGGTTATT-T-ATACTAAGACT--ATATATTAGAAT-----TTATTTCTTGATTGCTTTAAAGTTTAACAATGTTCATTGAAACGAAAA-G--GGTACAGACGTCTATCTTTATATGGCATTTTTATTAACAGGAATTTCAAATCGAAAGGAACAAGAA----TACGTAGTCGGCAATATTCCTAGCCATTCTGTATAtt
gi|17 : AATATAGTGTTTCGTGAATACATA------AATTCGTTAATAAAC-----------------------------CTA-GTGTAG-G-AAA-TAGAGGATA--C--AGACCA-T--CATTACTATT-T---------------TCCTCCTT-ATCTTTTTCCTCGTCA-------ACTTCCT-TGGCAGAATCTG-AAGCAAAAT------AG-----TTTAATAGATA-TAT-ATAAAACGAATACATATTTTAGAACTGAAGTTATTGTTTGATTTCT------TTCAACAGTATCCGCTGAAACGAAAATGATGACATAAACGTTTATCTTCATATGGTA-TTTTACTTACATGAATTTCAAATCGAAAAGAACAAGAATAATTATGTAGTCAGCAATTTTCCTAGCCATTCTGTttactcaaatgct
gi|18 : TGATGTAGTGTAACGCAATTACATG------AACTCGTTAATAAACA---TA------GTAA------GTATAGTCTGTGTGTAG-A-AAA-TAGAGTATA--CTCA---C--CACCATTACTATT-TTCCTCGTTGTGATTTTCCTCGTC-AAATTCC----------------A-------TGGCAGACTCTG-A-GTAAAAA------AA-----AATAATGGTTA--------CTTTGACTAAATATTTTGGAATTAAGGTTATTCATTGATTGCT------TTCAACAATATTCACTGAAACGAAAA-T--GACTAACACGTCTATCTTTATATGGTA-TTCTACTTACATGATTTTCAAATCGAAAGGAACAAGAA----TATGCAAACGACAATATTCCTAGCCATTt
gi|19 : gAATAAACTAATATAGTGTTACGTGAACACTTA------AACTCGTAAATAAACATCGTACAT---GTAC------GTATAATATAT-TTTA--A-AAA-TAGAGTAT------A---C--T--CACCAC----------------------CCTTGTT-GTATTTA----------------AATTTCT-TGACACAATCTGAT-ACAAAAT------AA-----ATAAAAGGTAA-T-TGATACTACG-CAAAATATATTGGAAT----GCTATTTATTGATTGCT------TTAAAAAATATTTAATGAAACGAAAA-A--GACACATACATTT-TCTTCATATGGTA-TTTTACTT------ATTTCAAATGGAAAAGAACACGAC----TATGTAGTCGGTAATATTCCTTGCCATT
gi|2 : TAAATGCTATAT------G------CA------T--TTTTGAAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTCAATGTAAAGAAAAAAATGTTGACCATTATTCAAATGTCTGATAATTGGTT------------TAA--CT-------AT----------ATCTGAATTATATATGCAAATTCACAGTCAAGCATGCATGCCCGCAGAAGGGTTTAATA-ATC-AGAAACAATAA-TTT--TTAATAACTTG----TT----ACATTC----CATT-GTCG--AA------T---------AG------TC----G--CTTGATTTGTACAAAG--AATATGTT-CTTCATTC----AACG-----------------AA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A-------------------A---------------AAC---------------------ACCGTGTAAAA-TAGAAACAGATACACATCGGCATGTGTTCACACAAGGACACAGATAATGCAT---GAGTATAATGCGGTGCATCAGTAAGAGATACATGACAGACAGGT----AGA----TA------TA-TAGACATGTGCGGAAAGGCAGCCAGACTATG-AGCGCCGATAGACGCGGAGATCAAATCACTATCA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-G--T-ATGTCAACGCCAGGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AAAGAA-ACACATATCATTGATTAACGAACGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTAGCTGCAAACGCTACCGTC----TATATATGCGTTC-TT---ATAGTTTTTAGATGGAAATTGATACAGTATA-AC-AT-TGTATGAACGCGTTGAAATATTT-CTTCAATAATCTAATAAAGAGTTACGTGAATAAATG------ATCTCGTTTATAAACT---TG------TTAT------GTACAGTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---C--T--CATTGCTATT-T---------------TCCTCGTT-GTATTAT----------------A-------TGACAGAATCTG-T-GGAAAAT------AA-----CTTAATGGTTA-A-T-AT-CTACTACTAAATATATATGAATTGAAAATATTTATTGATTTCT------TTCAACAGTATTAATTAAAACGAAAA-G--GAAACACACGTCTAACTTAATATGGTATTTTTACAGACATGAATTGCAAATCGATAGGAACAAGAA----TATGAAGTCGGCAATATCCCTTGCCATTCTGTATA
gi|20 : AATATAGTGTTACTTGAACTCTTA------AACTCGTAAATAAACA---TA------GTACATGTACGTATAATCTATGTGTAA-A-AAAATAGAGTATA--C--------------TCACCAT-------------------CCTTGTT-GCACTT---------------------------ACATT-TCTT-T-ACACAA--------A-----GGTAAC------T-T-ATACGACGACAAAATATATTGGAATGAAAGTTATTTATTGATTGCT------TTCAA-AATATTTACTGAAACGAAAA-G--GACACATACATTT-TCTTCATATGTTTTTTTTACTTA-------TTTAAATGGAAAGGAACAAGAA----TATGTAGTTGGTAATATTTCTAGCCATT
gi|21 : TAACTGTAACTATT---TATCAA-ATTAA-TAC--T-ATTTCAACGCCACCATAACTT--CATCAA--TTTTA-------TATGTATTT--TAG-AAGGAGATACAGGTTTAACA-AA--CA-ACACATCTCATTGAA-AACGCTCGAAATTACGACCT------A-----TGTGGATCCGATGTGTGTGCTTGCAAACACTACCGTC----TATACAAACATAC-TA---AAAGTTTTTAGATGGAAATTTAATCAATATA-ACAATGTGCGTGTACGCCTTGTAAT------TTAAATAA
gi|22 : TAAATGCTCTTT------A------CA------A--TTGTGCAATTAAAA-TACACATGCACCGTATTTT-TGAAACATACT--TAATTGTAGGGAAGTAGACATTGACCATTATTCAAATGTCGTATAAATTGAT------------TAA--CT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGTATGC-----------------------GTC-AGACACAATAA-TTT--TAAATAACTTA----CTGAAATTATTG----CCTT-GTGA--AA------T----------G------TC----GTATTTCATTtattg
gi|23 : ctttaatatgctaaatcaataAACTAATATAGTGTTACGTGAACACTTA------AATTCGTAAATAAACA---TA------GTACATATACGTATAGTCTATGTGTAA-ATAAA-CAGAGTATA--C---------T--TACCACTGTTGT---------------TGCTT-TT-ACATTTC----------------T-------TGACACAGTCTG-AAGCAAAAT------AA-----ATAAATGGTAA-T-TTATATTACGACAAAATATATCGGAACTGAAGTTATTTATTGATTGCT------TTCAAAAATATTTACTGAAACGAAAA-G--GACACccatttatt
gi|24 : ATAAACTAATATAGTGTTACGTTTTTACATG------AACTCGATAATAAACA---TA------TTAC------GTATAATCTGTGTGTAG-A-AAA-TAGAGTATACTC--A---CCAC--CATTACTCAT-T---------------TCCTCGTTGGGATTTTTCTCGTC---------AAATTCATTGGCAAAATCTG-A-GCAAAAT------AT-----ATTTATGGT--------TACTACGACTTAATATTTTGGAATTGAAGTTATTTATTGATTATT------T
gi|26 : AATAAACTTATACAACGTTACGTAAATAAATG------AACACGTAAATACACA---TA------TTAC------GTATAGTCTATGCGTAGAA-AAA-AAGAGTAAA--C--C---A--G--CATTACTATT-T---------------TTCTCTTT-GTATTTT----------------A-------TGACAGAATCTG-A-GCAAAATCTGAGCAAAATACATTTATGGTTATT-T-ATACTACGATTA
gi|27 : TTGAAGCTATTTATTAATTGCT------TTCTAAAGTATTCGTTGAAACGAAAA-G--GACACACGCGTTTATCTTCATATGGTATTTTTATTTACATGAATTTCAAATCGAAAGGAACAACAA----TATGTTGTCGGCACTATTCCTTGCCATTC
gi|28 : TAGATACTATATTAGTTCA------GA------A--TTTTGCATTTAAAA-TAAAAATGCACCATAGCTT-TTAGACATACTCTTAAAGGTAGAGAAATATACATTGACTATTATTCAGATGTCTGATAATTTG
gi|29 : tttaatatgcttaatcaataATTTATTGATTTAT------TTCAACAGTATGTATTG---------------CACAGAAGTCTATCTTCATATGGTATATTTACTTACATGAATTTCTAATCGAAAGGAACAAGAA----TATGTAGTCGGCACTATCCCTAGCCATTTTGT
gi|3 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAAATACATATGCAACGAAACTT-TGAGACATACTCTTCAATGTTGGGAAATAGATATTGACCATTATTCAAATGTCTGATAATTTGTT------------TAC--CT-------AT----------AT-------------GCACATACAAAGTTAAGCGTGCATGCCCGCAGATGGTCGTGACA-ATC-AGACACAATCA-TTT--TTAATAATTTA-----------CATTC----CATC-GTCG--AA------T---------ATCTATAGTC----G--CTTCATTTATACAAGG--AATATGTT-CT----------------------------------------------------------------------------------------------A--------------------T--------------------A-------------------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGCGGCAGATACGCACTGACATTTATTCACACCAGAACACAGATATTGTATGGGGAACATTATGTAGGACATCCGAAAGAGACACAAGACAGACAGGTAGAAAGA----CA------TA-TAGACATGTGCAGATAGTCAGCCAGACGAT-AATCGCCGACAGACGCCACGATCGAGACGCTAACA-ACA--CA------C--AA------A------CA----GATAAAGAA-AAGTATTATATATAACTGTTACTATC---TATCAA-ATTAA-T-TA-T-ATTTTAACGCCAGGATAACTA--CATCAA--TAATATAATTTTTATGTATAT--AACTAAGGTGATACACATTACACA-AA--AA-ACACATATCA------------------TACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGAAAATGCTACCGTC----TAAATATAGATGA-TT---AAAGTTTTAAGACGGAAATTTATATAGTATA-AT----TGTGTATACGCCTTGAAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AAATCGTTTATAAACA---TA------GTAC------GTATAGTCTCTGTGAAG-A-AAA-AAGAGTAAA--C--A---C--T--CATTACTATT-T---------------ACCTCGTT-GTATTCT----------------A-------TGACATAATCTG-T-GCAAAAT------AA-----ATTAAAAGTTA-T-TAATACAACGACTAAATATATTAGAATTGAACATATTTATTGATTTCT------TTCAACAGTATGTATTGAAACGAAAA-G--GGCAAACAGGTCTATCTTCATATGATAGTTTTACTTGCATGAATTTCAAATCGAAAGGAACAGGAA----TATGTAGTTGGTACTAACCCTAGCCATTCTGTATAttct
gi|30 : taaatatgattaatcaataACA-AT--CA-ACAAATATCATCGAATAACGATCGAAATTACGACCT------AATAATTGTGGATCCGA----------TGCAAAAGCTACCATC----TATATATACATAC-ATAAAAATATTTTGAG-TGAAAGTtaactcagatgt
gi|31 : AACA-------AACGTATAT--AACTGATGCGATAAATATTAACCA-AA--CA--CATATATTATTGATTAATGTTCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTTCCTGCAAATGCTACCaaaaaacaaca
gi|32 : GTATTCACTGAAACAAAAA-T--TGCTCACACGTCTATCTTCATATGGTA-TTTTACTTACATGATTTTCAAATCGAAAGGAACA
gi|33 : AACAAGAA----TATGTAGTTGTCAATA-TCCTCTCCAT
gi|34 : tat------------TAA--CT-------AT----------ATCTGTATCAGATATGCAAATACACCATCAAGTATGCATGCCCGCAGATTGATGTGACA-Aggagtatattactcagatgttatgcgttctgaaact
gi|36 : ACAAGAA----GATATGGTCAGTAATATCCCCAGCCATTGGGTAT
gi|4 : TGTAC------A------TA------A--TCTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGACGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCATCAAGCATGCATGCCCGCAGATGGATGTGACA-CTC-AGACA-AATAA-TTT--TAAAACACGTACCGATT----TCGTTC----ATTG-GTCG--AA------TGTAATATCTAA------TC----G--CTTCATTTGTCAAACG--ACGACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTAATAAA---------------------T-----------------------ACAAGATAATATCAACGATTAT--------------------A-------------------AGAT-----------CAAC---------------------ATCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAGA--TA-TAGACATGTGCGGATAGACAGCCAGAC-ATGAAACCCCGATAGACACCACGATCGAGACGCTGACA-ACA--CAACTATAC--AT------A------CA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACTTTACACA-AA--CA-ACACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTTTCTGCCTGCAATCGCTTCAGCC----TATATATACATAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATtttacttggatgttctgagt
gi|5 : ctttaatatacttaaacaatatatatactatattaaTGTAC------A------TA------A--TTTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGATGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCGTCAAGCATGCATGCCCGCAGATGGATGTGACA-CTC-AGACA-AATAA-TTT--TGAAACACTTACCGATT----TCGTTC----ATTG-GTCG--AA------TGTAATATCTAA------TC----G--CTTCATTTGTCAAACA--ACGACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTA-TAAAATACAAGATAATATCAACGATT-----------------------A--------------------T--------------------A-------------------AGAG-----------CAAC---------------------ACCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAC---TAATAGACATGTGCGGATAAACAGCCAGAC-ATGAAACCCCGATAGACACCATGATCGAGACGCTGACA-ACA--CA------C--AT------ATACATACA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACATTACACA-AA--CA-AAACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTATCTGCCTGCAATCGCTACCGCC----TATATATACAAAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATaaaacaaacattgcagtg
gi|6 : tttaatatacttaaacaatatatatactatattaaTAAATGCTATAT------A------CC------A--TTTTGTAATTAAAA-TACATATGCACCGTTACTT-TGAGACATACTCTTTAATGTAGAGAAATAGAAATTGACCATTTTTCAGATGTCAGATAATTTGTT------------TAA--CT-------ATCTTTGACTATATATGAATCAGATATGCAAATACACAGTTCAGCATGCATGCCCGCAGATGGGCGTGACA-ATC-AGACA-AATCA-TTT--TAAATAACTT-----TT----TCATTC----CTTT-GTCG--AA------TGTCTTC---AT------TC----G--CTTCATTTGTTAAAGT--ACGACGTT-TTTCAGTC----AACA-----------------AA---TCTCAGTAATGAA---------------------T-----------------------A--------------------TTAAACAATATTAACGGTTACA-------------------AGAG-----------CAAC---------------------ATCATGTAAA--TAGAGACAGATACACGCTGACATATGTTCACACAAAGACACAGATAATGCATGGTGAACATTATGTGGGACATCTGCAAGAGAAGCAAGACAGACAGGT----AGATAGACA------TA-GGGACATGTGCGGATTGGCAGCAAGGC-ATAAAACGCCGATAGACGCCACGATCGAGCTGCTAACA-ACA--CA------CCTAT------A------CAAACAG----AAAC-AAGTACTATGTATAACTGTTTCTTTG---TTTCAA-ATTGA-T-T--TTATTTCAACGCCACGATAACTA--TACCAA--TAATA-------TATGGATAT--AACTAAGGTTATACAGATTA-AAA-AA--CACACACATATCATTGATTAACGATCGAAATTACGACCG------AACGATTGAGGATCCGATG----TGCCTGCAATCGTTACTGCCTATATATATATATATAC-TT---AACGTTTTTAGATGGAAATTTATACAATGTATGCGAC-TGTGTGTACGACTTGTATTATgaaaacaaacattgcagtg
gi|7 : tttaatatgcttaatcaataTGAATGCTATAT------A------AATGTAGAA--TTTTGCAATCAATA-TATATGTGCACCGTA--TTATGAGACATACTCTTCAATGCAGAAAAATAGCCATTGATCATTATTCAGATGTCTGATCATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATACCATTAGATGGGCGTGACA-ATC-A-ACACAATAA-TTT--TAAATAACTTACTGCTT----CCAATC----TCTT-TTCC--AT------T---------GTCTTTTTTC----G--CTTCATTTGTAGAAGG--CGTATGTT-CTTCATCC----GTCG-----------------GA---TCTGAGAAATAAA---------------------TTTAAAACACTATAAAAGGTT---A--------------------T--------------------A-------------------AGAG-----------CAAT---------------------ATCATGTAAAC-AAGAGATATCTACGCACCGGCATCTGTTCACACAAGGACACAGATAATGCATGGTTAACATTATGTGTGGCATCAGGGAGAAATACAAGACAGACAGGT----AGA----TATACGTGTA-TAGACATGTGCTGATAGACAGCCGGAC-ATGAAACGCCGTTAGACGTCACGAT--AGC----AACACACATTCA------C--CT------A------AA----G----AAACAAAGTATTATGTGAAAGTGTATATATT---TATCAA-ATTAATT-T--T-ATTTCAACGTCACGATAAATA--CGTCAG--TAATA-------TATGTATCT--AAGTAAGGTGATACAGATTAAACA-AA--CA-ACACATCTCATTGAAAAATGATCGAAATTACGACC---------TG--TGTGGATCCAATGTGTCTACCTGCAATCGCCACCGTC----TATATAGACAAAC-TT---AATGTTTTTAGATTAAAATTTATACAATATA-TCAATGTGTGTGTA-GCCTTTTAATATaaaacaaatattgcag
gi|8 : ctttaatatgctaaatatataATGCACCGTAACTG-TGAGATATACTCTAAAATGTAGGGAAATAGACATTGACCATTAGTCAGATGTCTGATAATTTGTTTAACTATTTGTTTAA--CT-------AT----------ATCTAAATCAGATATGGAAATACACAGTCAAGCATGCATGCCCGCA----------ACA-AT----ACACTATA---TT--TTAATAAaaaggtattgcagt
gi|8 : ata---------------------T-----------------------A--------------------T--------------------A-------------------AGAG-----------AACC---------------------ATTATGCAGCA-TAGAGGCAGATACACACCGACATATGTATATACAAAAACACATATGATGCATGAAGAGCATGGTGTGGGGTATCAGGAAGAGTAACAAGACAAACAGGT----AGA----CT------TA-GAAACATGTGCAGATAAACTGCCAGAC-ATGAAACGCTGATAAACGCCGAGATCGAATCACTATCA-ACA--CACATATGC--AT------A------CA----G----AAAC-AAGTGCTTTGTATAACTGTAACTATT---TATCAA-ATTGA-T-T--TAATTTTAACGCCATGATAAGTA--CATCAA--TGTCA-------TATGTATAT--AAATAGGGTAATACAGATTGCACA-AA--CA-ACACAT---ATTGATTAACGATCGAAATTACGACCGATCAATAATTATTGTGGATCCGGTATGTCTATCTGCAAACGATACCGTC----TATGTTTACGTAC-TT---AAAGTTTGTAAATGGCCATTTAATCAATATA-ACAATGTGTGTGTACGCCATGTAATATaggaatcttgacaaatacatataaaacaatataatcggttataagagaaccattatgcagcatagaggcagatacacaccgacatatgtatatacaaaaacacatatgatgcatgaagagcatggtgtggggtatcaggaagagtaacaagacaaacaggtagacttagaaacatgtgcagataaactgccagacatgaaacgctgataaacgccgagatcgaatcactatcaacacacatatgcatacagaaacaagtgctttgtataactgtaactatttatcaaattgatttaattttaacgccatgataagtacatcaatgtcatatgtatataaatagggtaatacagattgcacaaacaacacatattgattaacgatcgaaattacgaccgatcaataattattgtggatccggtatgtctatctgcaaacgataccgtctatgtttacgtacttaaagtttgtaaatggccatttaatcaatataacaatgtgtgtgtacgccatgtaatatagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
gi|9 : ataatgcaccgtaactgtgagatatactctaaaatgtagggaaatagacattgaccattagtcagatgtctgataatttgtttaactatttgtttaactatatctaaatcagatatggaaatacacagtcaagcatgcatgcccgcaacaatacactatattttaataaaggaatcttgacaaatacatataaaacaatataatcggtTAAATGAAATAT------A------CA------A--TTTTGCAATTTAAA-TAAATATGCACCGTAAGTT-CGAGACATACTCTTAAATGCAGGGAAACATACATT-------ATTCAGATGTCAGATAATTTGTT------------TAA--CT-------AT----------ATTTGAATTAGATATGCAAATACACAGCCCAGCAAGCATGCCAGCAGATGGGGGTGAC--ATCAAGACACAATAAGTTTGATGACTAACTGT----TT----CCTTTC----TGTT-GCCGAAAA------T---------AT------TTCATAA--CTTCATTTGCAAAAGC--CATACGTT-CTTCATTC----AACG-----------------AA---TCTGAGTAATAAA---------------------T-----------------------AT-------------------T--------------------AAACAGTATATACAGTTATTAGAG-----------CAAC---------------------ATTATGCAAAC-TTGAGACACATACACACCGACATATCTACACACAAGGACATGGATAATGCAAAGAGGGCATTATATGGGGCATCAGGAAGAGATATAAGACAGACAGGT----AGA----CA------TA-TATACGTGTACTTGTATGCAACTAGGC-ATGGAACGCCGATA--------GATCGAGCCGCTAAAA-GTA--CA---------A-------A------CA----G----AAAC-AAATACTATGTATAGCTGCAACTGTTTAATATAAACATT---T-T--T-ATTTCAACGCCAAGATAACAA--CATCAT--TAATA-------TATGCATATAAAACTAAAGTGATAAAGATTAAACA-AA--CA-ACACATCTCATTGA-TAACGAACGAGATTACGACCG------AACAATTGTAGATCCGATGCGTCTGACTGCAAACACTAACGTC----TATATAAACATAC-TT---AATGTTTTTAGATGGAAATTTAAACAATATA-ACAATGTGTGTGTACGCCTTGTACTATagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTATTTTTGAAAATGACTTTCTGCAATAATTTCTTATGTAGTGCAGAAAGACATTTTTATCGCACTGTAAATCAACCGATATTTAATAGTTACCACTGAATCTTGCTAATAAATGGCTGTTTGAATGTGTTAAT
Unaligned ( gi|35 ): GAATACGAAGACATAGTAGACAATATTTCCAACCATAATGTATTTTGTTCGGATGGTTTGAGTTCTG
Unaligned ( gi|37 ): ACATGCACGTACACTGAACGTTTTATCAGACAATACTGTGGAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111 111111111111 1111111111 44444444444 777777777777777777777777 222222222222222222 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 11111111111 222222222222222222222 222222 1 222222222222222222222222 111111111 11 1111111 11 111111 1111111 111111 222222222222222 222222222222222 777777777777777777777777 111 2222222 1
lowQualScore : 8888888888888 666666 33 2 2 5 1 222222222222 33 8888888 0000000000 1 1 33 2 2 5 1 33 2 22222222222 88888 2 222222222222222222222222 6666 33 5555 3 2 6666 444444444444444444 555 2 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 33333333333 444444444444444444444 66 2 2 6666 66666 000000 3 3 3 3 44 333333333333333333333333 555555555 3 555 3 4 6 3 77 6 4 33 33 8888888 33 4 2 33 2 3 55 2222222 6666 3 555 1 3 8 2 0 0 00 0 777777 555 6666666 777777 3 3 3 1 999999999999999 3 000000000000000 3 222222222222222222222222 111 999999 88888 4444444 0 1 0 888888 0 6666 0 3 0 6666
lowQualScore : ............. ...... .. . . . . ............ .. ....... .......... . . .. . . . . .. . ........... ..... . ........................ .... .. .... . . .... .................. ... . ................................................................................................ ........... ..................... .. . . .... ..... ...... . . . . .. ........................ ......... . ... . . . . .. . . .. .. ....... .. . . .. . . .. ....... .... . ... . . . . . . .. . ...... ... ....... ...... . . . . ............... . ............... . ........................ ... ...... ..... ....... . . . ...... . .... . . . ....
lowQualScore : 5555555555555 444444 99 9 0 3 0 888888888888 44 1111111 9999999999 5 1 66 5 7 0 0 77 7 77777777777 33333 9 777777777777777777777777 1111 99 3333 1 1 5555 222222222222222222 444 8 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 66666666666 333333333333333333333 44 7 1 5555 99999 888888 1 3 8 3 66 888888888888888888888888 444444444 3 444 1 5 2 1 77 2 7 99 99 7777777 99 3 7 77 7 9 66 1111111 5555 1 444 0 3 6 5 5 3 22 5 777777 444 3333333 777777 3 3 3 8 777777777777777 3 888888888888888 3 777777777777777777777777 000 666666 33333 1111111 5 2 8 888888 4 2222 2 4 4 5555
consensus : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNA--A-TAACTTA----TT----CCATTC----CCTT-GTCGAA------T---------AN------TC----G--CTTCATTTGTAAAAGG--AATACGTT-CTTCATNC----AACG-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
Reference ( family-6834 ) : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNA--A-TAACTTA----TT----CCATTC----CCTT-GTCGAA------T---------AN------TC----G--CTTCATTTGTAAAAGG--AATACGTT-CTTCATNC----AACG-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
gi|1 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAA-TATATTTGCACCGTAACTT-TGATATATACACTTCAATGTAGGGAAA-AGACATTGGCCATTATTCAAATGTCTGATAATTTGTT------------TAA--TT-------AT----------ATCTGAATTTTATATGCCAATACACAGTCAAGCATGCATGCCCGCAGATAGGTTTAACA-ATCA-GAAACAATAATTGTTG--A-TAACTTA----------CC--TG----GCTTAG--GAA------G---------AA------AC----A--ATGTATTTCTACGAGG--AATACTTT-CTTTATTT----AACC-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------TAAAACAATATCAACGGGTATA--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACCAACTGGCATGTGTTTACACAAGGACAAAGATGATACATGGTGAGCATTATGTTGAGCATCAGGAAGAGATTCAAGGGAGACAGTT----AAA----CA------TA-TAGACATGTGCGGACTGGCAGCCATACGAT-AAATGCCGATAGACGCGACGATCGAGCCGCTAGCA-ACA--CC------C--AT------A------CA----G----AAAC-ATGTTCTATGTATAACTGTAACTATT---CATCAA-ATTAA-T-TA-T-ATTTCAAAGTCA-GATTAC-A--CATAAA--AAATA-------TA
gi|1 : cttaaatatgctaaatcaataTAACTATTCATCAAATTAAT------------TATAT--TTC-AAAGT----CAGATTACACATAA--AA-A---ATATAATTGATTAACGATAGAAATAACGACCG------GAAGATTGTGTATCCGATGTGTCTGCCTGCAAACATTACCGTC----TATATATACATACTTT---AATGTTTTTAGATGGAAATTGATACAGCATA-ACAATGTGTGT-T-CGCC-TGAAATATTTATTTTAATAACCTAATATAGCATTACGTGAAAAAATG------ATCTCGTTTATAAACA---TA------TTAC------GTATATTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---A--G--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GCAATAT------AA-----AGTAATGGTTATT-T-GTACTACGAAAAAATATATTAGAATTGAAAATATCTATTGATTCCT------TCCAACAGTATTTATTGAAACGAAAA-G--GACATATAGGTCTATCTTCATATGGTATTTTTACTTACATAAATTTCAAATCAAAAGGAACAAGAT----CATGTAGTCGGCACTTTCCCTAGCCATTCCGTAattgattaacgatagaaataacgaccggaagattgtgtatccgatgtgtctgcctgcaaacattaccgtctatatatacatactttaatgtttttagatggaaattgatacagcataacaatgtgtgttcgcctgaaatatttattttaataacctaatatagcattacgtgaaaaaatgatctcgtttataaacatattacgtatattctgtgtgtagaaaatagagtaaacaagcattactattttcctcgttgtattttatgacagaatctgtgcaatataaagtaatggttatttgtactacgaaaaaatatattagaattgaaaatatctattgattccttccaacagtatttattgaaacgaaaaggacatataggtctatcttcatatggtatttttacttacataaatttcaaatcaaaaggaacaagatcatgtagtcggcactttccctagccattccgtaacttattcag
gi|10 : cttaaatatgctaaatcaatataaatgttatatacaattttgcaattaaaatatatttgcaccgtaactttgatatatacacttcaatgtagggaaaagacattggccattattcaaatgtctgataatttgtttaattatatctgaattttatatgccaatacacagtcaagcatgcatgcccgcagataggtttaacaatcagaaacaataattgttgataacttacctggcttaggaagaaacaatgtatttctacgaggaatactttctttatttaaccgatctgagtaataaatataaaacaatatcaacgggtataagagcaacatcatgtaaaatagagacagataccaactggcatgtgtttacacaaggacaaagatgatacatggtgagcattatgttgagcatcaggaagagattcaagggagacagttaaacatatagacatgtgcggactggcagccatacgataaatgccgatagacgcgacgatcgagccgctagcaacacccatacagaaacatgttctatgtataactgTGCTATAT------A------AATGTGGAA--TTTTGCAATCAAAT-TATATATGCACCGTA--TTATGAGACATACTCTTCAATACAGAGAAATAGACATTAATCATTATTTAGATGTCTGATGATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCAGCAGATGGGCGTGACA-ATCA-GACA-AA-AATTT-AA--A-TAACTTACTGCTT----CCAATC----TCTT-GTCCAA------TGTCTTC---AT------TC----G--CTTCATTTATAAAAGG--CGTACGTT-CTGCATCC----CACA-----------------TA---TCTTAGAAATAAA---------------------TATAAAACAACACTATAAACGGTTA--------------------T--------------------A--------AGAG-----------TAAC---------------------ATCATGTAAAC-AAGAGACATATA-ACACTAACATATTTATACACAAGGACACAGATAATGCATGGTGAACATTATATGGGGCATTAGGAAGTGATACAAGACAGACGGGT----AGA----CA------TA-T--ACATGTACGTGTAGGCAGCCTGAC-ATGAAACGCCGATAGACGTCACGATCGAGCCGCTGACA-ACA--CA------T--AT------A------CACATGG----AGAC-AAA-AGTATGTAAAAGTGTAAATGTT---TATC---ATT---T-T--T-TTTTT------------ACTA--CATCAA--TAATA-------TAAGTATAA--AAGTAAGGTGATACAGATTTAACA-AA--CA-ACACATCTCATTGAATAACGATCGAAATTACGACC---------TG--TGTGGATCAGATGTGTGTGCTTGCAAACGCTACCGTC----TTTATAAATATAC-TA---ACAGTTTTTAGATGTAAATTTATACTATATA-ACAATGTGTGTGTACGTCTTacttattcag
gi|11 : ctttaatatgcaaaatctatatgctTAAATGCTCTAT------A------CA------C--TTTTGCAATTAAAA-TGCATATGCACCGTATCTT-TGAGACATACTCTTAAATGTAGGTAAGTAAATACTGACCATTATTCAAATGTCCTATAAATTGTA------------TAAAACT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGCATGCA-----------------G------CA-GACACAATATTTTTAA--A-TAACTTA----CT----CAATTTAATGCCTT-GTGGAA------T---------GTCGTCTTTC----G--TTTCTTTTATTAAAGG--ACTATGTT-TTTCATTT----TTCG-----------------GA---TCTGCGAAATAAA---------------------T-----------------------ATAAAACAATATAAACGGTTAT--------------------A--------GGAG-----------CAAC---------------------ATTATACAAAAACAGAGACAGATACTCACCGATATATGTATACATAAGGACATAGAAAATTCATGGAGAGCAAATTGTCGGGAAGCAAGAAGATATACAAGACAGACAGGT----GG-----CA------TA-TAGACATTAACGGATAGGCAGCCAGACGAT-AATCGTTGATAGACGCCAATATCTAGCCGCTAACA-ACA--CA------C--ATGCACATA------CA----G----AAAC-AATAACTATGTATGACTGTAACTATT---TATCAA-ATAAA-T-TC-T-ATTTTAACGCCAGGATAACTA--CACCAA--TAATA-------TATGTATAT--AACTAAGCTGATACAGATTACACA-AA--CA-ACACACATCATTGATTAATGATCGAAATTACGACCG------TACGATTGTGGATCCGACGTtttat
gi|11 : tttaatatgctaaatcaataCGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTtacgtgaataaatgtgattaaactcgttaataaacataatacgtatagtctatgtgt
gi|12 : tttaatatgctaaatcaatataaatgctctatacacttttgcaattaaaatgcatatgcaccgtatctttgagacatactcttaaatgtaggtaagtaaatactgaccattattcaaatgtcctataaattgtataaaactatatctgaaacatatatgcatatacacagtcaagcatgcagcagacacaatatttttaaataacttactcaatttaatgccttgtggaatgtcgtctttcgtttcttttattaaaggactatgtttttcatttttcggatctgcgaaataaatataaaacaatataaacggttataggagcaacattatacaaaaacagagacagatactcaccgatatatgtatacataaggacatagaaaattcatggagagcaaattgtcgggaagcaagaagatatacaagacagacaggtggcatatagacattaacggataggcagccagacgataatcgttgatagacgccaatatctagccgctaacaacacacatgcacatacagaaacaataactatgtatgactgtaactatttatcaaataaattctattttaacgccaggataactacaccaataatatatgtatataactaagctgatacagattacacaaacaacacacatcattgattaatgatcgaaattacgaccgtacgattgtggatccgaAATGCTGTAT------A------CA------A--ATTTGCAATTAAAA-TACATATGCACCGTAATTT-TGAGACATACTTTTGAATGTAGAAAAATAGACTTTGACCATTATTCAGATGTCTGATAATTTGTT------------TAT--CT-------AT----------ATCTGAATC-TG-ATGCAAATACACAGTCCAGCATGCATGCCCGCAGACGGGCGTGACA-ATCA-GACACAGCAATTTTTT--A-T---TTA----T------CATT-----TCTT-G-----------------------------CC----G--CTTTACTTGTAAAAGG--AATATATA-CTTCATAC----AACG-----------------AA---TCTGAATAACACA---------------------T-----------------------A--------------------T--------------------AGAACAATTAAAGTGTTTATAAGACGAC---------------------ATCATGTAGAA-TAGAGACAGACACGCACCGACATATGTTCGCACAAGCACACAGAGATTGCATGGTGCTAATTATGTGGAACATCAGAAATAGATACAAGACAGACAGCT----AGC----CA------TA-TAGACATGTGCAGATAGGCAGCCAGAC-ATGGAACGCCGATAAACGCCACGATCAAGCCGCT----------------------T------A------CA------------------ACTATTCATAACTGTAAATATT---CATCAA-ATTAATT-T--T-ATTTCAACGGCACGATAACTT--TATCA----------------------AT--AACTAAGGTGATACAGATTAAACA-AA--CA-GCACATATCATTGATTAACGATCCAAATTACGACCA------AACGATTGT-GATCCGATGTGTCTGCCTGCAAACACTACCGTA----TTTATATACATGC-TT---AAAGTATTTAGATGGAAATTTATACAATATA-ACAA--TATGTGTACACTTTGAAATAT
gi|13 : atatgctaaatcactattAATGCTATAT------AAATGTACA------AAATGTTGCAATTAAAA-TACATATGCACCGTAACTT-AGAGACATACTCTTAAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TCA--CTATATCTGAT----------ATCTGAATCATATATGCAAATACGCAG-CAAGCATGCATGCCCATAGATGAGCGTGACA-ATTT-GACACCGTAATTTTAA--A-TAACTTACTGCTT----CCAATC----TCTA-GTCCAATGTCTGT---------AT------TC----G--CTTCATTTGTAAAAGA--CATACGTC-CTTCATCA----AACG-----------------GA---TCCGAGAAATAAA---------------------T-----------------------ATAAAACACAATAAACGGTTAT--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAC-TAGAGACAGATACACAATGACATATGTCCACACAAGGACACAGATAATGTACGGAGAGCGTTATTTGGGACAGCAGGAAGAGATACAAGACAGACAGGT----AG--------------A-TAAACATATGCTGATAGGCAACCAGAaac
gi|14 : ctttaatatgctaaatcaatattTGAATGTAGGGAAACAGACATTGGCCATTATTCAGATATCTGATGATTCGTT------------TAA--CT-------AT----------GCCTGTATTATAACTGCAGACACACTGCCAAGAAAGCATAGCGGCAGA------TGAAATATCA-GACAAAATAACTATTA--A-TAACTTA----CTGTTGTCACTC----TCTC-GTTGAA------A---------AA------TC-------CT--ATGTGGAAAAAGTTTATTCGCTGCTTCACGCATTAAACGCCAATAAAATTTATCCAGAGGCTCTGAGAAATAAA---------------------T-----------------------A--------------------T--------------------A--------CGA------------CAACATAAACGGTTATAAGAGCAACATCATGTAAAA-TAGAGACAGATACGAACCGACATATACTCGCACAAGGACAAAGATt
gi|15 : atgtaaccatagatatatatgtgataTAATAAACTAATATAGTGTTACGTGATTACATG------AACTCGTTAATAAACA---TAGCAAATGTAC------ATATAGTCTGTGTGTAG-A-AAA-AAGAGTATACTC--A---CCAT--CATTACTAAG-T---------------TCTTCGTT-GTGTTTTTTCCTCGTCAAATTCCG-------TGGCAGAATCTG-A-GCAAAAT------AA-----ATTAACGGT--------TACTACGACTAAATATTTTGGAACTGAAGTTATTTATTGATTGCA------TTCAACAGTATTCACTGAAACGAAAA-T--GTCTCACACGTCTATCTTCATATGGTA-TTTTACCTA-AT---TTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGTAATATTCCTAGCCATTCTGT
gi|16 : CGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGCAAA--C--C---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GAAAAAT------AA-----ATTAATGGTTATT-T-ATACTAAGACT--ATATATTAGAAT-----TTATTTCTTGATTGCTTTAAAGTTTAACAATGTTCATTGAAACGAAAA-G--GGTACAGACGTCTATCTTTATATGGCATTTTTATTAACAGGAATTTCAAATCGAAAGGAACAAGAA----TACGTAGTCGGCAATATTCCTAGCCATTCTGTATAtt
gi|17 : AATATAGTGTTTCGTGAATACATA------AATTCGTTAATAAAC-----------------------------CTA-GTGTAG-G-AAA-TAGAGGATA--C--AGACCA-T--CATTACTATT-T---------------TCCTCCTT-ATCTTTTTCCTCGTCA-------ACTTCCT-TGGCAGAATCTG-AAGCAAAAT------AG-----TTTAATAGATA-TAT-ATAAAACGAATACATATTTTAGAACTGAAGTTATTGTTTGATTTCT------TTCAACAGTATCCGCTGAAACGAAAATGATGACATAAACGTTTATCTTCATATGGTA-TTTTACTTACATGAATTTCAAATCGAAAAGAACAAGAATAATTATGTAGTCAGCAATTTTCCTAGCCATTCTGTttactcaaatgct
gi|18 : TGATGTAGTGTAACGCAATTACATG------AACTCGTTAATAAACA---TA------GTAA------GTATAGTCTGTGTGTAG-A-AAA-TAGAGTATA--CTCA---C--CACCATTACTATT-TTCCTCGTTGTGATTTTCCTCGTC-AAATTCC----------------A-------TGGCAGACTCTG-A-GTAAAAA------AA-----AATAATGGTTA--------CTTTGACTAAATATTTTGGAATTAAGGTTATTCATTGATTGCT------TTCAACAATATTCACTGAAACGAAAA-T--GACTAACACGTCTATCTTTATATGGTA-TTCTACTTACATGATTTTCAAATCGAAAGGAACAAGAA----TATGCAAACGACAATATTCCTAGCCATTt
gi|19 : gAATAAACTAATATAGTGTTACGTGAACACTTA------AACTCGTAAATAAACATCGTACAT---GTAC------GTATAATATAT-TTTA--A-AAA-TAGAGTAT------A---C--T--CACCAC----------------------CCTTGTT-GTATTTA----------------AATTTCT-TGACACAATCTGAT-ACAAAAT------AA-----ATAAAAGGTAA-T-TGATACTACG-CAAAATATATTGGAAT----GCTATTTATTGATTGCT------TTAAAAAATATTTAATGAAACGAAAA-A--GACACATACATTT-TCTTCATATGGTA-TTTTACTT------ATTTCAAATGGAAAAGAACACGAC----TATGTAGTCGGTAATATTCCTTGCCATT
gi|2 : TAAATGCTATAT------G------CA------T--TTTTGAAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTCAATGTAAAGAAAAAAATGTTGACCATTATTCAAATGTCTGATAATTGGTT------------TAA--CT-------AT----------ATCTGAATTATATATGCAAATTCACAGTCAAGCATGCATGCCCGCAGAAGGGTTTAATA-ATCA-GAAACAATAATTTTTA--A-TAACTTG----TT----ACATTC----CATT-GTCGAA------T---------AG------TC----G--CTTGATTTGTACAAAG--AATATGTT-CTTCATTC----AACG-----------------AA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------A---------------AAC---------------------ACCGTGTAAAA-TAGAAACAGATACACATCGGCATGTGTTCACACAAGGACACAGATAATGCAT---GAGTATAATGCGGTGCATCAGTAAGAGATACATGACAGACAGGT----AGA----TA------TA-TAGACATGTGCGGAAAGGCAGCCAGACTATG-AGCGCCGATAGACGCGGAGATCAAATCACTATCA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-G--T-ATGTCAACGCCAGGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AAAGAA-ACACATATCATTGATTAACGAACGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTAGCTGCAAACGCTACCGTC----TATATATGCGTTC-TT---ATAGTTTTTAGATGGAAATTGATACAGTATA-AC-AT-TGTATGAACGCGTTGAAATATTT-CTTCAATAATCTAATAAAGAGTTACGTGAATAAATG------ATCTCGTTTATAAACT---TG------TTAT------GTACAGTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---C--T--CATTGCTATT-T---------------TCCTCGTT-GTATTAT----------------A-------TGACAGAATCTG-T-GGAAAAT------AA-----CTTAATGGTTA-A-T-AT-CTACTACTAAATATATATGAATTGAAAATATTTATTGATTTCT------TTCAACAGTATTAATTAAAACGAAAA-G--GAAACACACGTCTAACTTAATATGGTATTTTTACAGACATGAATTGCAAATCGATAGGAACAAGAA----TATGAAGTCGGCAATATCCCTTGCCATTCTGTATA
gi|20 : AATATAGTGTTACTTGAACTCTTA------AACTCGTAAATAAACA---TA------GTACATGTACGTATAATCTATGTGTAA-A-AAAATAGAGTATA--C--------------TCACCAT-------------------CCTTGTT-GCACTT---------------------------ACATT-TCTT-T-ACACAA--------A-----GGTAAC------T-T-ATACGACGACAAAATATATTGGAATGAAAGTTATTTATTGATTGCT------TTCAA-AATATTTACTGAAACGAAAA-G--GACACATACATTT-TCTTCATATGTTTTTTTTACTTA-------TTTAAATGGAAAGGAACAAGAA----TATGTAGTTGGTAATATTTCTAGCCATT
gi|21 : TAACTGTAACTATT---TATCAA-ATTAA-TAC--T-ATTTCAACGCCACCATAACTT--CATCAA--TTTTA-------TATGTATTT--TAG-AAGGAGATACAGGTTTAACA-AA--CA-ACACATCTCATTGAA-AACGCTCGAAATTACGACCT------A-----TGTGGATCCGATGTGTGTGCTTGCAAACACTACCGTC----TATACAAACATAC-TA---AAAGTTTTTAGATGGAAATTTAATCAATATA-ACAATGTGCGTGTACGCCTTGTAAT------TTAAATAA
gi|22 : TAAATGCTCTTT------A------CA------A--TTGTGCAATTAAAA-TACACATGCACCGTATTTT-TGAAACATACT--TAATTGTAGGGAAGTAGACATTGACCATTATTCAAATGTCGTATAAATTGAT------------TAA--CT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGTATGC-----------------------GTCA-GACACAATAATTTTAA--A-TAACTTA----CTGAAATTATTG----CCTT-GTGAAA------T----------G------TC----GTATTTCATTtattg
gi|23 : ctttaatatgctaaatcaataAACTAATATAGTGTTACGTGAACACTTA------AATTCGTAAATAAACA---TA------GTACATATACGTATAGTCTATGTGTAA-ATAAA-CAGAGTATA--C---------T--TACCACTGTTGT---------------TGCTT-TT-ACATTTC----------------T-------TGACACAGTCTG-AAGCAAAAT------AA-----ATAAATGGTAA-T-TTATATTACGACAAAATATATCGGAACTGAAGTTATTTATTGATTGCT------TTCAAAAATATTTACTGAAACGAAAA-G--GACACccatttatt
gi|24 : ATAAACTAATATAGTGTTACGTTTTTACATG------AACTCGATAATAAACA---TA------TTAC------GTATAATCTGTGTGTAG-A-AAA-TAGAGTATACTC--A---CCAC--CATTACTCAT-T---------------TCCTCGTTGGGATTTTTCTCGTC---------AAATTCATTGGCAAAATCTG-A-GCAAAAT------AT-----ATTTATGGT--------TACTACGACTTAATATTTTGGAATTGAAGTTATTTATTGATTATT------T
gi|26 : AATAAACTTATACAACGTTACGTAAATAAATG------AACACGTAAATACACA---TA------TTAC------GTATAGTCTATGCGTAGAA-AAA-AAGAGTAAA--C--C---A--G--CATTACTATT-T---------------TTCTCTTT-GTATTTT----------------A-------TGACAGAATCTG-A-GCAAAATCTGAGCAAAATACATTTATGGTTATT-T-ATACTACGATTA
gi|27 : TTGAAGCTATTTATTAATTGCT------TTCTAAAGTATTCGTTGAAACGAAAA-G--GACACACGCGTTTATCTTCATATGGTATTTTTATTTACATGAATTTCAAATCGAAAGGAACAACAA----TATGTTGTCGGCACTATTCCTTGCCATTC
gi|28 : TAGATACTATATTAGTTCA------GA------A--TTTTGCATTTAAAA-TAAAAATGCACCATAGCTT-TTAGACATACTCTTAAAGGTAGAGAAATATACATTGACTATTATTCAGATGTCTGATAATTTG
gi|29 : tttaatatgcttaatcaataATTTATTGATTTAT------TTCAACAGTATGTATTG---------------CACAGAAGTCTATCTTCATATGGTATATTTACTTACATGAATTTCTAATCGAAAGGAACAAGAA----TATGTAGTCGGCACTATCCCTAGCCATTTTGT
gi|3 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAAATACATATGCAACGAAACTT-TGAGACATACTCTTCAATGTTGGGAAATAGATATTGACCATTATTCAAATGTCTGATAATTTGTT------------TAC--CT-------AT----------AT-------------GCACATACAAAGTTAAGCGTGCATGCCCGCAGATGGTCGTGACA-ATCA-GACACAATCATTTTTA--A-TAATTTA-----------CATTC----CATC-GTCGAA------T---------ATCTATAGTC----G--CTTCATTTATACAAGG--AATATGTT-CT----------------------------------------------------------------------------------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGCGGCAGATACGCACTGACATTTATTCACACCAGAACACAGATATTGTATGGGGAACATTATGTAGGACATCCGAAAGAGACACAAGACAGACAGGTAGAAAGA----CA------TA-TAGACATGTGCAGATAGTCAGCCAGACGAT-AATCGCCGACAGACGCCACGATCGAGACGCTAACA-ACA--CA------C--AA------A------CA----GATAAAGAA-AAGTATTATATATAACTGTTACTATC---TATCAA-ATTAA-T-TA-T-ATTTTAACGCCAGGATAACTA--CATCAA--TAATATAATTTTTATGTATAT--AACTAAGGTGATACACATTACACA-AA--AA-ACACATATCA------------------TACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGAAAATGCTACCGTC----TAAATATAGATGA-TT---AAAGTTTTAAGACGGAAATTTATATAGTATA-AT----TGTGTATACGCCTTGAAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AAATCGTTTATAAACA---TA------GTAC------GTATAGTCTCTGTGAAG-A-AAA-AAGAGTAAA--C--A---C--T--CATTACTATT-T---------------ACCTCGTT-GTATTCT----------------A-------TGACATAATCTG-T-GCAAAAT------AA-----ATTAAAAGTTA-T-TAATACAACGACTAAATATATTAGAATTGAACATATTTATTGATTTCT------TTCAACAGTATGTATTGAAACGAAAA-G--GGCAAACAGGTCTATCTTCATATGATAGTTTTACTTGCATGAATTTCAAATCGAAAGGAACAGGAA----TATGTAGTTGGTACTAACCCTAGCCATTCTGTATAttct
gi|30 : taaatatgattaatcaataACA-AT--CA-ACAAATATCATCGAATAACGATCGAAATTACGACCT------AATAATTGTGGATCCGA----------TGCAAAAGCTACCATC----TATATATACATAC-ATAAAAATATTTTGAG-TGAAAGTtaactcagatgt
gi|31 : AACA-------AACGTATAT--AACTGATGCGATAAATATTAACCA-AA--CA--CATATATTATTGATTAATGTTCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTTCCTGCAAATGCTACCaaaaaacaaca
gi|32 : GTATTCACTGAAACAAAAA-T--TGCTCACACGTCTATCTTCATATGGTA-TTTTACTTACATGATTTTCAAATCGAAAGGAACA
gi|33 : AACAAGAA----TATGTAGTTGTCAATA-TCCTCTCCAT
gi|34 : tat------------TAA--CT-------AT----------ATCTGTATCAGATATGCAAATACACCATCAAGTATGCATGCCCGCAGATTGATGTGACA-Aggagtatattactcagatgttatgcgttctgaaact
gi|36 : ACAAGAA----GATATGGTCAGTAATATCCCCAGCCATTGGGTAT
gi|4 : TGTAC------A------TA------A--TCTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGACGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCATCAAGCATGCATGCCCGCAGATGGATGTGACA-CTCA-GACA-AATAATTTTAA--A-ACACGTACCGATT----TCGTTC----ATTG-GTCGAA------TGTAATATCTAA------TC----G--CTTCATTTGTCAAACG--ACGACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTAATAAA---------------------T-----------------------ACAAGATAATATCAACGATTAT--------------------A--------AGAT-----------CAAC---------------------ATCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAGA--TA-TAGACATGTGCGGATAGACAGCCAGAC-ATGAAACCCCGATAGACACCACGATCGAGACGCTGACA-ACA--CAACTATAC--AT------A------CA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACTTTACACA-AA--CA-ACACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTTTCTGCCTGCAATCGCTTCAGCC----TATATATACATAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATtttacttggatgttctgagt
gi|5 : ctttaatatacttaaacaatatatatactatattaaTGTAC------A------TA------A--TTTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGATGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCGTCAAGCATGCATGCCCGCAGATGGATGTGACA-CTCA-GACA-AATAATTTTGA--A-ACACTTACCGATT----TCGTTC----ATTG-GTCGAA------TGTAATATCTAA------TC----G--CTTCATTTGTCAAACA--ACGACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTA-TAAAATACAAGATAATATCAACGATT-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ACCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAC---TAATAGACATGTGCGGATAAACAGCCAGAC-ATGAAACCCCGATAGACACCATGATCGAGACGCTGACA-ACA--CA------C--AT------ATACATACA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACATTACACA-AA--CA-AAACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTATCTGCCTGCAATCGCTACCGCC----TATATATACAAAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATaaaacaaacattgcagtg
gi|6 : tttaatatacttaaacaatatatatactatattaaTAAATGCTATAT------A------CC------A--TTTTGTAATTAAAA-TACATATGCACCGTTACTT-TGAGACATACTCTTTAATGTAGAGAAATAGAAATTGACCATTTTTCAGATGTCAGATAATTTGTT------------TAA--CT-------ATCTTTGACTATATATGAATCAGATATGCAAATACACAGTTCAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACA-AATCATTTTAA--A-TAACTT-----TT----TCATTC----CTTT-GTCGAA------TGTCTTC---AT------TC----G--CTTCATTTGTTAAAGT--ACGACGTT-TTTCAGTC----AACA-----------------AA---TCTCAGTAATGAA---------------------T-----------------------A--------------------TTAAACAATATTAACGGTTACA--------AGAG-----------CAAC---------------------ATCATGTAAA--TAGAGACAGATACACGCTGACATATGTTCACACAAAGACACAGATAATGCATGGTGAACATTATGTGGGACATCTGCAAGAGAAGCAAGACAGACAGGT----AGATAGACA------TA-GGGACATGTGCGGATTGGCAGCAAGGC-ATAAAACGCCGATAGACGCCACGATCGAGCTGCTAACA-ACA--CA------CCTAT------A------CAAACAG----AAAC-AAGTACTATGTATAACTGTTTCTTTG---TTTCAA-ATTGA-T-T--TTATTTCAACGCCACGATAACTA--TACCAA--TAATA-------TATGGATAT--AACTAAGGTTATACAGATTA-AAA-AA--CACACACATATCATTGATTAACGATCGAAATTACGACCG------AACGATTGAGGATCCGATG----TGCCTGCAATCGTTACTGCCTATATATATATATATAC-TT---AACGTTTTTAGATGGAAATTTATACAATGTATGCGAC-TGTGTGTACGACTTGTATTATgaaaacaaacattgcagtg
gi|7 : tttaatatgcttaatcaataTGAATGCTATAT------A------AATGTAGAA--TTTTGCAATCAATA-TATATGTGCACCGTA--TTATGAGACATACTCTTCAATGCAGAAAAATAGCCATTGATCATTATTCAGATGTCTGATCATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATACCATTAGATGGGCGTGACA-ATCA--ACACAATAATTTTAA--A-TAACTTACTGCTT----CCAATC----TCTT-TTCCAT------T---------GTCTTTTTTC----G--CTTCATTTGTAGAAGG--CGTATGTT-CTTCATCC----GTCG-----------------GA---TCTGAGAAATAAA---------------------TTTAAAACACTATAAAAGGTT---A--------------------T--------------------A--------AGAG-----------CAAT---------------------ATCATGTAAAC-AAGAGATATCTACGCACCGGCATCTGTTCACACAAGGACACAGATAATGCATGGTTAACATTATGTGTGGCATCAGGGAGAAATACAAGACAGACAGGT----AGA----TATACGTGTA-TAGACATGTGCTGATAGACAGCCGGAC-ATGAAACGCCGTTAGACGTCACGAT--AGC----AACACACATTCA------C--CT------A------AA----G----AAACAAAGTATTATGTGAAAGTGTATATATT---TATCAA-ATTAATT-T--T-ATTTCAACGTCACGATAAATA--CGTCAG--TAATA-------TATGTATCT--AAGTAAGGTGATACAGATTAAACA-AA--CA-ACACATCTCATTGAAAAATGATCGAAATTACGACC---------TG--TGTGGATCCAATGTGTCTACCTGCAATCGCCACCGTC----TATATAGACAAAC-TT---AATGTTTTTAGATTAAAATTTATACAATATA-TCAATGTGTGTGTA-GCCTTTTAATATaaaacaaatattgcag
gi|8 : ctttaatatgctaaatatataATGCACCGTAACTG-TGAGATATACTCTAAAATGTAGGGAAATAGACATTGACCATTAGTCAGATGTCTGATAATTTGTTTAACTATTTGTTTAA--CT-------AT----------ATCTAAATCAGATATGGAAATACACAGTCAAGCATGCATGCCCGCA----------ACA-AT----ACACTATA--TTTTA--A-TAAaaaggtattgcagt
gi|8 : ata---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------AACC---------------------ATTATGCAGCA-TAGAGGCAGATACACACCGACATATGTATATACAAAAACACATATGATGCATGAAGAGCATGGTGTGGGGTATCAGGAAGAGTAACAAGACAAACAGGT----AGA----CT------TA-GAAACATGTGCAGATAAACTGCCAGAC-ATGAAACGCTGATAAACGCCGAGATCGAATCACTATCA-ACA--CACATATGC--AT------A------CA----G----AAAC-AAGTGCTTTGTATAACTGTAACTATT---TATCAA-ATTGA-T-T--TAATTTTAACGCCATGATAAGTA--CATCAA--TGTCA-------TATGTATAT--AAATAGGGTAATACAGATTGCACA-AA--CA-ACACAT---ATTGATTAACGATCGAAATTACGACCGATCAATAATTATTGTGGATCCGGTATGTCTATCTGCAAACGATACCGTC----TATGTTTACGTAC-TT---AAAGTTTGTAAATGGCCATTTAATCAATATA-ACAATGTGTGTGTACGCCATGTAATATaggaatcttgacaaatacatataaaacaatataatcggttataagagaaccattatgcagcatagaggcagatacacaccgacatatgtatatacaaaaacacatatgatgcatgaagagcatggtgtggggtatcaggaagagtaacaagacaaacaggtagacttagaaacatgtgcagataaactgccagacatgaaacgctgataaacgccgagatcgaatcactatcaacacacatatgcatacagaaacaagtgctttgtataactgtaactatttatcaaattgatttaattttaacgccatgataagtacatcaatgtcatatgtatataaatagggtaatacagattgcacaaacaacacatattgattaacgatcgaaattacgaccgatcaataattattgtggatccggtatgtctatctgcaaacgataccgtctatgtttacgtacttaaagtttgtaaatggccatttaatcaatataacaatgtgtgtgtacgccatgtaatatagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
gi|9 : ataatgcaccgtaactgtgagatatactctaaaatgtagggaaatagacattgaccattagtcagatgtctgataatttgtttaactatttgtttaactatatctaaatcagatatggaaatacacagtcaagcatgcatgcccgcaacaatacactatattttaataaaggaatcttgacaaatacatataaaacaatataatcggtTAAATGAAATAT------A------CA------A--TTTTGCAATTTAAA-TAAATATGCACCGTAAGTT-CGAGACATACTCTTAAATGCAGGGAAACATACATT-------ATTCAGATGTCAGATAATTTGTT------------TAA--CT-------AT----------ATTTGAATTAGATATGCAAATACACAGCCCAGCAAGCATGCCAGCAGATGGGGGTGACA--TCAAGACACAATAAGTTTGATGACTAACTGT----TT----CCTTTC----TGTT-GCCGAAAA----T---------AT------TTCATAA--CTTCATTTGCAAAAGC--CATACGTT-CTTCATTC----AACG-----------------AA---TCTGAGTAATAAA---------------------T-----------------------A--------------------TTAAACAGTATATACAGTT--ATT------AGAG-----------CAAC---------------------ATTATGCAAAC-TTGAGACACATACACACCGACATATCTACACACAAGGACATGGATAATGCAAAGAGGGCATTATATGGGGCATCAGGAAGAGATATAAGACAGACAGGT----AGA----CA------TA-TATACGTGTACTTGTATGCAACTAGGC-ATGGAACGCCGATA--------GATCGAGCCGCTAAAA-GTA--CA---------A-------A------CA----G----AAAC-AAATACTATGTATAGCTGCAACTGTTTAATATAAACATT---T-T--T-ATTTCAACGCCAAGATAACAA--CATCAT--TAATA-------TATGCATATAAAACTAAAGTGATAAAGATTAAACA-AA--CA-ACACATCTCATTGA-TAACGAACGAGATTACGACCG------AACAATTGTAGATCCGATGCGTCTGACTGCAAACACTAACGTC----TATATAAACATAC-TT---AATGTTTTTAGATGGAAATTTAAACAATATA-ACAATGTGTGTGTACGCCTTGTACTATagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTATTTTTGAAAATGACTTTCTGCAATAATTTCTTATGTAGTGCAGAAAGACATTTTTATCGCACTGTAAATCAACCGATATTTAATAGTTACCACTGAATCTTGCTAATAAATGGCTGTTTGAATGTGTTAAT
Unaligned ( gi|35 ): GAATACGAAGACATAGTAGACAATATTTCCAACCATAATGTATTTTGTTCGGATGGTTTGAGTTCTG
Unaligned ( gi|37 ): ACATGCACGTACACTGAACGTTTTATCAGACAATACTGTGGAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111 111111111111 1111111111 44444444444 777777777777777777777777 222222222222222222 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 11111111111 222222222222222222222 222222 1 222222222222222222222222 111111111 11 1111111 11 111111 1111111 111111 222222222222222 222222222222222 777777777777777777777777 111 2222222 1
lowQualScore : 8888888888888 666666 33 2 2 5 1 222222222222 33 8888888 0000000000 1 1 33 2 2 5 1 33 2 22222222222 88888 2 222222222222222222222222 6666 33 5555 3 2 6666 444444444444444444 555 2 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 33333333333 444444444444444444444 66 2 2 6666 66666 000000 3 3 3 3 44 333333333333333333333333 555555555 3 555 3 4 6 3 77 6 4 33 33 8888888 33 4 2 33 2 3 55 2222222 6666 3 555 1 3 8 2 0 0 00 0 777777 555 6666666 777777 3 3 3 1 999999999999999 3 000000000000000 3 222222222222222222222222 111 999999 88888 4444444 0 1 0 888888 0 6666 0 3 0 6666
lowQualScore : ............. ...... .. . . . . ............ .. ....... .......... . . .. . . . . .. . ........... ..... . ........................ .... .. .... . . .... .................. ... . ................................................................................................ ........... ..................... .. . . .... ..... ...... . . . . .. ........................ ......... . ... . . . . .. . . .. .. ....... .. . . .. . . .. ....... .... . ... . . . . . . .. . ...... ... ....... ...... . . . . ............... . ............... . ........................ ... ...... ..... ....... . . . ...... . .... . . . ....
lowQualScore : 5555555555555 444444 99 9 0 3 0 888888888888 44 1111111 9999999999 5 1 66 5 7 0 0 77 7 77777777777 33333 9 777777777777777777777777 1111 99 3333 1 1 5555 222222222222222222 444 8 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 66666666666 333333333333333333333 44 7 1 5555 99999 888888 1 3 8 3 66 888888888888888888888888 444444444 3 444 1 5 2 1 77 2 7 99 99 7777777 99 3 7 77 7 9 66 1111111 5555 1 444 0 3 6 5 5 3 22 5 777777 444 3333333 777777 3 3 3 8 777777777777777 3 888888888888888 3 777777777777777777777777 000 666666 33333 1111111 5 2 8 888888 4 2222 2 4 4 5555
consensus : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNA--A-TAACTTA----TT----CCATTC----CCTT-GTCGAA------T---------AN------TC----G--CTTCATTTGTAAAAGG--AATACGTT-CTTCATNC----AACG-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
Reference ( family-6834 ) : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNA--A-TAACTTA----TT----CCATTC----CCTT-GTCGAA------T---------AN------TC----G--CTTCATTTGTAAAAGG--AATACGTT-CTTCATNC----AACG-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
gi|1 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAA-TATATTTGCACCGTAACTT-TGATATATACACTTCAATGTAGGGAAA-AGACATTGGCCATTATTCAAATGTCTGATAATTTGTT------------TAA--TT-------AT----------ATCTGAATTTTATATGCCAATACACAGTCAAGCATGCATGCCCGCAGATAGGTTTAACA-ATCA-GAAACAATAATTGTTG--A-TAACTTA----------CC--TG----GCTTAG--GAA------G---------AA------AC----A--ATGTATTTCTACGAGG--AATACTTT-CTTTATTT----AACC-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------TAAAACAATATCAACGGGTATA--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACCAACTGGCATGTGTTTACACAAGGACAAAGATGATACATGGTGAGCATTATGTTGAGCATCAGGAAGAGATTCAAGGGAGACAGTT----AAA----CA------TA-TAGACATGTGCGGACTGGCAGCCATACGAT-AAATGCCGATAGACGCGACGATCGAGCCGCTAGCA-ACA--CC------C--AT------A------CA----G----AAAC-ATGTTCTATGTATAACTGTAACTATT---CATCAA-ATTAA-T-TA-T-ATTTCAAAGTCA-GATTAC-A--CATAAA--AAATA-------TA
gi|1 : cttaaatatgctaaatcaataTAACTATTCATCAAATTAAT------------TATAT--TTC-AAAGT----CAGATTACACATAA--AA-A---ATATAATTGATTAACGATAGAAATAACGACCG------GAAGATTGTGTATCCGATGTGTCTGCCTGCAAACATTACCGTC----TATATATACATACTTT---AATGTTTTTAGATGGAAATTGATACAGCATA-ACAATGTGTGT-T-CGCC-TGAAATATTTATTTTAATAACCTAATATAGCATTACGTGAAAAAATG------ATCTCGTTTATAAACA---TA------TTAC------GTATATTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---A--G--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GCAATAT------AA-----AGTAATGGTTATT-T-GTACTACGAAAAAATATATTAGAATTGAAAATATCTATTGATTCCT------TCCAACAGTATTTATTGAAACGAAAA-G--GACATATAGGTCTATCTTCATATGGTATTTTTACTTACATAAATTTCAAATCAAAAGGAACAAGAT----CATGTAGTCGGCACTTTCCCTAGCCATTCCGTAattgattaacgatagaaataacgaccggaagattgtgtatccgatgtgtctgcctgcaaacattaccgtctatatatacatactttaatgtttttagatggaaattgatacagcataacaatgtgtgttcgcctgaaatatttattttaataacctaatatagcattacgtgaaaaaatgatctcgtttataaacatattacgtatattctgtgtgtagaaaatagagtaaacaagcattactattttcctcgttgtattttatgacagaatctgtgcaatataaagtaatggttatttgtactacgaaaaaatatattagaattgaaaatatctattgattccttccaacagtatttattgaaacgaaaaggacatataggtctatcttcatatggtatttttacttacataaatttcaaatcaaaaggaacaagatcatgtagtcggcactttccctagccattccgtaacttattcag
gi|10 : cttaaatatgctaaatcaatataaatgttatatacaattttgcaattaaaatatatttgcaccgtaactttgatatatacacttcaatgtagggaaaagacattggccattattcaaatgtctgataatttgtttaattatatctgaattttatatgccaatacacagtcaagcatgcatgcccgcagataggtttaacaatcagaaacaataattgttgataacttacctggcttaggaagaaacaatgtatttctacgaggaatactttctttatttaaccgatctgagtaataaatataaaacaatatcaacgggtataagagcaacatcatgtaaaatagagacagataccaactggcatgtgtttacacaaggacaaagatgatacatggtgagcattatgttgagcatcaggaagagattcaagggagacagttaaacatatagacatgtgcggactggcagccatacgataaatgccgatagacgcgacgatcgagccgctagcaacacccatacagaaacatgttctatgtataactgTGCTATAT------A------AATGTGGAA--TTTTGCAATCAAAT-TATATATGCACCGTA--TTATGAGACATACTCTTCAATACAGAGAAATAGACATTAATCATTATTTAGATGTCTGATGATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCAGCAGATGGGCGTGACA-ATCA-GACA-AA-AATTT-AA--A-TAACTTACTGCTT----CCAATC----TCTT-GTCCAA------TGTCTTC---AT------TC----G--CTTCATTTATAAAAGG--CGTACGTT-CTGCATCC----CACA-----------------TA---TCTTAGAAATAAA---------------------TATAAAACAACACTATAAACGGTTA--------------------T--------------------A--------AGAG-----------TAAC---------------------ATCATGTAAAC-AAGAGACATATA-ACACTAACATATTTATACACAAGGACACAGATAATGCATGGTGAACATTATATGGGGCATTAGGAAGTGATACAAGACAGACGGGT----AGA----CA------TA-T--ACATGTACGTGTAGGCAGCCTGAC-ATGAAACGCCGATAGACGTCACGATCGAGCCGCTGACA-ACA--CA------T--AT------A------CACATGG----AGAC-AAA-AGTATGTAAAAGTGTAAATGTT---TATC---ATT---T-T--T-TTTTT------------ACTA--CATCAA--TAATA-------TAAGTATAA--AAGTAAGGTGATACAGATTTAACA-AA--CA-ACACATCTCATTGAATAACGATCGAAATTACGACC---------TG--TGTGGATCAGATGTGTGTGCTTGCAAACGCTACCGTC----TTTATAAATATAC-TA---ACAGTTTTTAGATGTAAATTTATACTATATA-ACAATGTGTGTGTACGTCTTacttattcag
gi|11 : ctttaatatgcaaaatctatatgctTAAATGCTCTAT------A------CA------C--TTTTGCAATTAAAA-TGCATATGCACCGTATCTT-TGAGACATACTCTTAAATGTAGGTAAGTAAATACTGACCATTATTCAAATGTCCTATAAATTGTA------------TAAAACT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGCATGCA-----------------G------CA-GACACAATATTTTTAA--A-TAACTTA----CT----CAATTTAATGCCTT-GTGGAA------T---------GTCGTCTTTC----G--TTTCTTTTATTAAAGG--ACTATGTT-TTTCATTT----TTCG-----------------GA---TCTGCGAAATAAA---------------------T-----------------------ATAAAACAATATAAACGGTTAT--------------------A--------GGAG-----------CAAC---------------------ATTATACAAAAACAGAGACAGATACTCACCGATATATGTATACATAAGGACATAGAAAATTCATGGAGAGCAAATTGTCGGGAAGCAAGAAGATATACAAGACAGACAGGT----GG-----CA------TA-TAGACATTAACGGATAGGCAGCCAGACGAT-AATCGTTGATAGACGCCAATATCTAGCCGCTAACA-ACA--CA------C--ATGCACATA------CA----G----AAAC-AATAACTATGTATGACTGTAACTATT---TATCAA-ATAAA-T-TC-T-ATTTTAACGCCAGGATAACTA--CACCAA--TAATA-------TATGTATAT--AACTAAGCTGATACAGATTACACA-AA--CA-ACACACATCATTGATTAATGATCGAAATTACGACCG------TACGATTGTGGATCCGACGTtttat
gi|11 : tttaatatgctaaatcaataCGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTtacgtgaataaatgtgattaaactcgttaataaacataatacgtatagtctatgtgt
gi|12 : tttaatatgctaaatcaatataaatgctctatacacttttgcaattaaaatgcatatgcaccgtatctttgagacatactcttaaatgtaggtaagtaaatactgaccattattcaaatgtcctataaattgtataaaactatatctgaaacatatatgcatatacacagtcaagcatgcagcagacacaatatttttaaataacttactcaatttaatgccttgtggaatgtcgtctttcgtttcttttattaaaggactatgtttttcatttttcggatctgcgaaataaatataaaacaatataaacggttataggagcaacattatacaaaaacagagacagatactcaccgatatatgtatacataaggacatagaaaattcatggagagcaaattgtcgggaagcaagaagatatacaagacagacaggtggcatatagacattaacggataggcagccagacgataatcgttgatagacgccaatatctagccgctaacaacacacatgcacatacagaaacaataactatgtatgactgtaactatttatcaaataaattctattttaacgccaggataactacaccaataatatatgtatataactaagctgatacagattacacaaacaacacacatcattgattaatgatcgaaattacgaccgtacgattgtggatccgaAATGCTGTAT------A------CA------A--ATTTGCAATTAAAA-TACATATGCACCGTAATTT-TGAGACATACTTTTGAATGTAGAAAAATAGACTTTGACCATTATTCAGATGTCTGATAATTTGTT------------TAT--CT-------AT----------ATCTGAATC-TG-ATGCAAATACACAGTCCAGCATGCATGCCCGCAGACGGGCGTGACA-ATCA-GACACAGCAATTTTTT--A-T---TTA----T------CATT-----TCTT-G-----------------------------CC----G--CTTTACTTGTAAAAGG--AATATATA-CTTCATAC----AACG-----------------AA---TCTGAATAACACA---------------------T-----------------------A--------------------T--------------------AGAACAATTAAAGTGTTTATAAGACGAC---------------------ATCATGTAGAA-TAGAGACAGACACGCACCGACATATGTTCGCACAAGCACACAGAGATTGCATGGTGCTAATTATGTGGAACATCAGAAATAGATACAAGACAGACAGCT----AGC----CA------TA-TAGACATGTGCAGATAGGCAGCCAGAC-ATGGAACGCCGATAAACGCCACGATCAAGCCGCT----------------------T------A------CA------------------ACTATTCATAACTGTAAATATT---CATCAA-ATTAATT-T--T-ATTTCAACGGCACGATAACTT--TATCA----------------------AT--AACTAAGGTGATACAGATTAAACA-AA--CA-GCACATATCATTGATTAACGATCCAAATTACGACCA------AACGATTGT-GATCCGATGTGTCTGCCTGCAAACACTACCGTA----TTTATATACATGC-TT---AAAGTATTTAGATGGAAATTTATACAATATA-ACAA--TATGTGTACACTTTGAAATAT
gi|13 : atatgctaaatcactattAATGCTATAT------AAATGTACA------AAATGTTGCAATTAAAA-TACATATGCACCGTAACTT-AGAGACATACTCTTAAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TCA--CTATATCTGAT----------ATCTGAATCATATATGCAAATACGCAG-CAAGCATGCATGCCCATAGATGAGCGTGACA-ATTT-GACACCGTAATTTTAA--A-TAACTTACTGCTT----CCAATC----TCTA-GTCCAATGTCTGT---------AT------TC----G--CTTCATTTGTAAAAGA--CATACGTC-CTTCATCA----AACG-----------------GA---TCCGAGAAATAAA---------------------T-----------------------ATAAAACACAATAAACGGTTAT--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAC-TAGAGACAGATACACAATGACATATGTCCACACAAGGACACAGATAATGTACGGAGAGCGTTATTTGGGACAGCAGGAAGAGATACAAGACAGACAGGT----AG--------------A-TAAACATATGCTGATAGGCAACCAGAaac
gi|14 : ctttaatatgctaaatcaatattTGAATGTAGGGAAACAGACATTGGCCATTATTCAGATATCTGATGATTCGTT------------TAA--CT-------AT----------GCCTGTATTATAACTGCAGACACACTGCCAAGAAAGCATAGCGGCAGA------TGAAATATCA-GACAAAATAACTATTA--A-TAACTTA----CTGTTGTCACTC----TCTC-GTTGAA------A---------AA------TC-------CT--ATGTGGAAAAAGTTTATTCGCTGCTTCACGCATTAAACGCCAATAAAATTTATCCAGAGGCTCTGAGAAATAAA---------------------T-----------------------A--------------------T--------------------A--------CGA------------CAACATAAACGGTTATAAGAGCAACATCATGTAAAA-TAGAGACAGATACGAACCGACATATACTCGCACAAGGACAAAGATt
gi|15 : atgtaaccatagatatatatgtgataTAATAAACTAATATAGTGTTACGTGATTACATG------AACTCGTTAATAAACA---TAGCAAATGTAC------ATATAGTCTGTGTGTAG-A-AAA-AAGAGTATACTC--A---CCAT--CATTACTAAG-T---------------TCTTCGTT-GTGTTTTTTCCTCGTCAAATTCCG-------TGGCAGAATCTG-A-GCAAAAT------AA-----ATTAACGGT--------TACTACGACTAAATATTTTGGAACTGAAGTTATTTATTGATTGCA------TTCAACAGTATTCACTGAAACGAAAA-T--GTCTCACACGTCTATCTTCATATGGTA-TTTTACCTA-AT---TTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGTAATATTCCTAGCCATTCTGT
gi|16 : CGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGCAAA--C--C---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GAAAAAT------AA-----ATTAATGGTTATT-T-ATACTAAGACT--ATATATTAGAAT-----TTATTTCTTGATTGCTTTAAAGTTTAACAATGTTCATTGAAACGAAAA-G--GGTACAGACGTCTATCTTTATATGGCATTTTTATTAACAGGAATTTCAAATCGAAAGGAACAAGAA----TACGTAGTCGGCAATATTCCTAGCCATTCTGTATAtt
gi|17 : AATATAGTGTTTCGTGAATACATA------AATTCGTTAATAAAC-----------------------------CTA-GTGTAG-G-AAA-TAGAGGATA--C--AGACCA-T--CATTACTATT-T---------------TCCTCCTT-ATCTTTTTCCTCGTCA-------ACTTCCT-TGGCAGAATCTG-AAGCAAAAT------AG-----TTTAATAGATA-TAT-ATAAAACGAATACATATTTTAGAACTGAAGTTATTGTTTGATTTCT------TTCAACAGTATCCGCTGAAACGAAAATGATGACATAAACGTTTATCTTCATATGGTA-TTTTACTTACATGAATTTCAAATCGAAAAGAACAAGAATAATTATGTAGTCAGCAATTTTCCTAGCCATTCTGTttactcaaatgct
gi|18 : TGATGTAGTGTAACGCAATTACATG------AACTCGTTAATAAACA---TA------GTAA------GTATAGTCTGTGTGTAG-A-AAA-TAGAGTATA--CTCA---C--CACCATTACTATT-TTCCTCGTTGTGATTTTCCTCGTC-AAATTCC----------------A-------TGGCAGACTCTG-A-GTAAAAA------AA-----AATAATGGTTA--------CTTTGACTAAATATTTTGGAATTAAGGTTATTCATTGATTGCT------TTCAACAATATTCACTGAAACGAAAA-T--GACTAACACGTCTATCTTTATATGGTA-TTCTACTTACATGATTTTCAAATCGAAAGGAACAAGAA----TATGCAAACGACAATATTCCTAGCCATTt
gi|19 : gAATAAACTAATATAGTGTTACGTGAACACTTA------AACTCGTAAATAAACATCGTACAT---GTAC------GTATAATATAT-TTTA--A-AAA-TAGAGTAT------A---C--T--CACCAC----------------------CCTTGTT-GTATTTA----------------AATTTCT-TGACACAATCTGAT-ACAAAAT------AA-----ATAAAAGGTAA-T-TGATACTACG-CAAAATATATTGGAAT----GCTATTTATTGATTGCT------TTAAAAAATATTTAATGAAACGAAAA-A--GACACATACATTT-TCTTCATATGGTA-TTTTACTT------ATTTCAAATGGAAAAGAACACGAC----TATGTAGTCGGTAATATTCCTTGCCATT
gi|2 : TAAATGCTATAT------G------CA------T--TTTTGAAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTCAATGTAAAGAAAAAAATGTTGACCATTATTCAAATGTCTGATAATTGGTT------------TAA--CT-------AT----------ATCTGAATTATATATGCAAATTCACAGTCAAGCATGCATGCCCGCAGAAGGGTTTAATA-ATCA-GAAACAATAATTTTTA--A-TAACTTG----TT----ACATTC----CATT-GTCGAA------T---------AG------TC----G--CTTGATTTGTACAAAG--AATATGTT-CTTCATTC----AACG-----------------AA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------A---------------AAC---------------------ACCGTGTAAAA-TAGAAACAGATACACATCGGCATGTGTTCACACAAGGACACAGATAATGCAT---GAGTATAATGCGGTGCATCAGTAAGAGATACATGACAGACAGGT----AGA----TA------TA-TAGACATGTGCGGAAAGGCAGCCAGACTATG-AGCGCCGATAGACGCGGAGATCAAATCACTATCA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-G--T-ATGTCAACGCCAGGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AAAGAA-ACACATATCATTGATTAACGAACGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTAGCTGCAAACGCTACCGTC----TATATATGCGTTC-TT---ATAGTTTTTAGATGGAAATTGATACAGTATA-AC-AT-TGTATGAACGCGTTGAAATATTT-CTTCAATAATCTAATAAAGAGTTACGTGAATAAATG------ATCTCGTTTATAAACT---TG------TTAT------GTACAGTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---C--T--CATTGCTATT-T---------------TCCTCGTT-GTATTAT----------------A-------TGACAGAATCTG-T-GGAAAAT------AA-----CTTAATGGTTA-A-T-AT-CTACTACTAAATATATATGAATTGAAAATATTTATTGATTTCT------TTCAACAGTATTAATTAAAACGAAAA-G--GAAACACACGTCTAACTTAATATGGTATTTTTACAGACATGAATTGCAAATCGATAGGAACAAGAA----TATGAAGTCGGCAATATCCCTTGCCATTCTGTATA
gi|20 : AATATAGTGTTACTTGAACTCTTA------AACTCGTAAATAAACA---TA------GTACATGTACGTATAATCTATGTGTAA-A-AAAATAGAGTATA--C--------------TCACCAT-------------------CCTTGTT-GCACTT---------------------------ACATT-TCTT-T-ACACAA--------A-----GGTAAC------T-T-ATACGACGACAAAATATATTGGAATGAAAGTTATTTATTGATTGCT------TTCAA-AATATTTACTGAAACGAAAA-G--GACACATACATTT-TCTTCATATGTTTTTTTTACTTA-------TTTAAATGGAAAGGAACAAGAA----TATGTAGTTGGTAATATTTCTAGCCATT
gi|21 : TAACTGTAACTATT---TATCAA-ATTAA-TAC--T-ATTTCAACGCCACCATAACTT--CATCAA--TTTTA-------TATGTATTT--TAG-AAGGAGATACAGGTTTAACA-AA--CA-ACACATCTCATTGAA-AACGCTCGAAATTACGACCT------A-----TGTGGATCCGATGTGTGTGCTTGCAAACACTACCGTC----TATACAAACATAC-TA---AAAGTTTTTAGATGGAAATTTAATCAATATA-ACAATGTGCGTGTACGCCTTGTAAT------TTAAATAA
gi|22 : TAAATGCTCTTT------A------CA------A--TTGTGCAATTAAAA-TACACATGCACCGTATTTT-TGAAACATACT--TAATTGTAGGGAAGTAGACATTGACCATTATTCAAATGTCGTATAAATTGAT------------TAA--CT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGTATGC-----------------------GTCA-GACACAATAATTTTAA--A-TAACTTA----CTGAAATTATTG----CCTT-GTGAAA------T----------G------TC----GTATTTCATTtattg
gi|23 : ctttaatatgctaaatcaataAACTAATATAGTGTTACGTGAACACTTA------AATTCGTAAATAAACA---TA------GTACATATACGTATAGTCTATGTGTAA-ATAAA-CAGAGTATA--C---------T--TACCACTGTTGT---------------TGCTT-TT-ACATTTC----------------T-------TGACACAGTCTG-AAGCAAAAT------AA-----ATAAATGGTAA-T-TTATATTACGACAAAATATATCGGAACTGAAGTTATTTATTGATTGCT------TTCAAAAATATTTACTGAAACGAAAA-G--GACACccatttatt
gi|24 : ATAAACTAATATAGTGTTACGTTTTTACATG------AACTCGATAATAAACA---TA------TTAC------GTATAATCTGTGTGTAG-A-AAA-TAGAGTATACTC--A---CCAC--CATTACTCAT-T---------------TCCTCGTTGGGATTTTTCTCGTC---------AAATTCATTGGCAAAATCTG-A-GCAAAAT------AT-----ATTTATGGT--------TACTACGACTTAATATTTTGGAATTGAAGTTATTTATTGATTATT------T
gi|26 : AATAAACTTATACAACGTTACGTAAATAAATG------AACACGTAAATACACA---TA------TTAC------GTATAGTCTATGCGTAGAA-AAA-AAGAGTAAA--C--C---A--G--CATTACTATT-T---------------TTCTCTTT-GTATTTT----------------A-------TGACAGAATCTG-A-GCAAAATCTGAGCAAAATACATTTATGGTTATT-T-ATACTACGATTA
gi|27 : TTGAAGCTATTTATTAATTGCT------TTCTAAAGTATTCGTTGAAACGAAAA-G--GACACACGCGTTTATCTTCATATGGTATTTTTATTTACATGAATTTCAAATCGAAAGGAACAACAA----TATGTTGTCGGCACTATTCCTTGCCATTC
gi|28 : TAGATACTATATTAGTTCA------GA------A--TTTTGCATTTAAAA-TAAAAATGCACCATAGCTT-TTAGACATACTCTTAAAGGTAGAGAAATATACATTGACTATTATTCAGATGTCTGATAATTTG
gi|29 : tttaatatgcttaatcaataATTTATTGATTTAT------TTCAACAGTATGTATTG---------------CACAGAAGTCTATCTTCATATGGTATATTTACTTACATGAATTTCTAATCGAAAGGAACAAGAA----TATGTAGTCGGCACTATCCCTAGCCATTTTGT
gi|3 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAAATACATATGCAACGAAACTT-TGAGACATACTCTTCAATGTTGGGAAATAGATATTGACCATTATTCAAATGTCTGATAATTTGTT------------TAC--CT-------AT----------AT-------------GCACATACAAAGTTAAGCGTGCATGCCCGCAGATGGTCGTGACA-ATCA-GACACAATCATTTTTA--A-TAATTTA-----------CATTC----CATC-GTCGAA------T---------ATCTATAGTC----G--CTTCATTTATACAAGG--AATATGTT-CT----------------------------------------------------------------------------------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGCGGCAGATACGCACTGACATTTATTCACACCAGAACACAGATATTGTATGGGGAACATTATGTAGGACATCCGAAAGAGACACAAGACAGACAGGTAGAAAGA----CA------TA-TAGACATGTGCAGATAGTCAGCCAGACGAT-AATCGCCGACAGACGCCACGATCGAGACGCTAACA-ACA--CA------C--AA------A------CA----GATAAAGAA-AAGTATTATATATAACTGTTACTATC---TATCAA-ATTAA-T-TA-T-ATTTTAACGCCAGGATAACTA--CATCAA--TAATATAATTTTTATGTATAT--AACTAAGGTGATACACATTACACA-AA--AA-ACACATATCA------------------TACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGAAAATGCTACCGTC----TAAATATAGATGA-TT---AAAGTTTTAAGACGGAAATTTATATAGTATA-AT----TGTGTATACGCCTTGAAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AAATCGTTTATAAACA---TA------GTAC------GTATAGTCTCTGTGAAG-A-AAA-AAGAGTAAA--C--A---C--T--CATTACTATT-T---------------ACCTCGTT-GTATTCT----------------A-------TGACATAATCTG-T-GCAAAAT------AA-----ATTAAAAGTTA-T-TAATACAACGACTAAATATATTAGAATTGAACATATTTATTGATTTCT------TTCAACAGTATGTATTGAAACGAAAA-G--GGCAAACAGGTCTATCTTCATATGATAGTTTTACTTGCATGAATTTCAAATCGAAAGGAACAGGAA----TATGTAGTTGGTACTAACCCTAGCCATTCTGTATAttct
gi|30 : taaatatgattaatcaataACA-AT--CA-ACAAATATCATCGAATAACGATCGAAATTACGACCT------AATAATTGTGGATCCGA----------TGCAAAAGCTACCATC----TATATATACATAC-ATAAAAATATTTTGAG-TGAAAGTtaactcagatgt
gi|31 : AACA-------AACGTATAT--AACTGATGCGATAAATATTAACCA-AA--CA--CATATATTATTGATTAATGTTCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTTCCTGCAAATGCTACCaaaaaacaaca
gi|32 : GTATTCACTGAAACAAAAA-T--TGCTCACACGTCTATCTTCATATGGTA-TTTTACTTACATGATTTTCAAATCGAAAGGAACA
gi|33 : AACAAGAA----TATGTAGTTGTCAATA-TCCTCTCCAT
gi|34 : tat------------TAA--CT-------AT----------ATCTGTATCAGATATGCAAATACACCATCAAGTATGCATGCCCGCAGATTGATGTGACA-Aggagtatattactcagatgttatgcgttctgaaact
gi|36 : ACAAGAA----GATATGGTCAGTAATATCCCCAGCCATTGGGTAT
gi|4 : TGTAC------A------TA------A--TCTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGACGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCATCAAGCATGCATGCCCGCAGATGGATGTGACA-CTCA-GACA-AATAATTTTAA--A-ACACGTACCGATT----TCGTTC----ATTG-GTCGAA------TGTAATATCTAA------TC----G--CTTCATTTGTCAAACG--ACGACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTAATAAA---------------------T-----------------------ACAAGATAATATCAACGATTAT--------------------A--------AGAT-----------CAAC---------------------ATCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAGA--TA-TAGACATGTGCGGATAGACAGCCAGAC-ATGAAACCCCGATAGACACCACGATCGAGACGCTGACA-ACA--CAACTATAC--AT------A------CA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACTTTACACA-AA--CA-ACACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTTTCTGCCTGCAATCGCTTCAGCC----TATATATACATAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATtttacttggatgttctgagt
gi|5 : ctttaatatacttaaacaatatatatactatattaaTGTAC------A------TA------A--TTTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGATGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCGTCAAGCATGCATGCCCGCAGATGGATGTGACA-CTCA-GACA-AATAATTTTGA--A-ACACTTACCGATT----TCGTTC----ATTG-GTCGAA------TGTAATATCTAA------TC----G--CTTCATTTGTCAAACA--ACGACGTT-CTTCATGC----AAAA-----------------CA---TCTGAGTA-TAAAATACAAGATAATATCAACGATT-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ACCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAC---TAATAGACATGTGCGGATAAACAGCCAGAC-ATGAAACCCCGATAGACACCATGATCGAGACGCTGACA-ACA--CA------C--AT------ATACATACA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACATTACACA-AA--CA-AAACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTATCTGCCTGCAATCGCTACCGCC----TATATATACAAAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATaaaacaaacattgcagtg
gi|6 : tttaatatacttaaacaatatatatactatattaaTAAATGCTATAT------A------CC------A--TTTTGTAATTAAAA-TACATATGCACCGTTACTT-TGAGACATACTCTTTAATGTAGAGAAATAGAAATTGACCATTTTTCAGATGTCAGATAATTTGTT------------TAA--CT-------ATCTTTGACTATATATGAATCAGATATGCAAATACACAGTTCAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACA-AATCATTTTAA--A-TAACTT-----TT----TCATTC----CTTT-GTCGAA------TGTCTTC---AT------TC----G--CTTCATTTGTTAAAGT--ACGACGTT-TTTCAGTC----AACA-----------------AA---TCTCAGTAATGAA---------------------T-----------------------A--------------------TTAAACAATATTAACGGTTACA--------AGAG-----------CAAC---------------------ATCATGTAAA--TAGAGACAGATACACGCTGACATATGTTCACACAAAGACACAGATAATGCATGGTGAACATTATGTGGGACATCTGCAAGAGAAGCAAGACAGACAGGT----AGATAGACA------TA-GGGACATGTGCGGATTGGCAGCAAGGC-ATAAAACGCCGATAGACGCCACGATCGAGCTGCTAACA-ACA--CA------CCTAT------A------CAAACAG----AAAC-AAGTACTATGTATAACTGTTTCTTTG---TTTCAA-ATTGA-T-T--TTATTTCAACGCCACGATAACTA--TACCAA--TAATA-------TATGGATAT--AACTAAGGTTATACAGATTA-AAA-AA--CACACACATATCATTGATTAACGATCGAAATTACGACCG------AACGATTGAGGATCCGATG----TGCCTGCAATCGTTACTGCCTATATATATATATATAC-TT---AACGTTTTTAGATGGAAATTTATACAATGTATGCGAC-TGTGTGTACGACTTGTATTATgaaaacaaacattgcagtg
gi|7 : tttaatatgcttaatcaataTGAATGCTATAT------A------AATGTAGAA--TTTTGCAATCAATA-TATATGTGCACCGTA--TTATGAGACATACTCTTCAATGCAGAAAAATAGCCATTGATCATTATTCAGATGTCTGATCATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATACCATTAGATGGGCGTGACA-ATCA--ACACAATAATTTTAA--A-TAACTTACTGCTT----CCAATC----TCTT-TTCCAT------T---------GTCTTTTTTC----G--CTTCATTTGTAGAAGG--CGTATGTT-CTTCATCC----GTCG-----------------GA---TCTGAGAAATAAA---------------------TTTAAAACACTATAAAAGGTT---A--------------------T--------------------A--------AGAG-----------CAAT---------------------ATCATGTAAAC-AAGAGATATCTACGCACCGGCATCTGTTCACACAAGGACACAGATAATGCATGGTTAACATTATGTGTGGCATCAGGGAGAAATACAAGACAGACAGGT----AGA----TATACGTGTA-TAGACATGTGCTGATAGACAGCCGGAC-ATGAAACGCCGTTAGACGTCACGAT--AGC----AACACACATTCA------C--CT------A------AA----G----AAACAAAGTATTATGTGAAAGTGTATATATT---TATCAA-ATTAATT-T--T-ATTTCAACGTCACGATAAATA--CGTCAG--TAATA-------TATGTATCT--AAGTAAGGTGATACAGATTAAACA-AA--CA-ACACATCTCATTGAAAAATGATCGAAATTACGACC---------TG--TGTGGATCCAATGTGTCTACCTGCAATCGCCACCGTC----TATATAGACAAAC-TT---AATGTTTTTAGATTAAAATTTATACAATATA-TCAATGTGTGTGTA-GCCTTTTAATATaaaacaaatattgcag
gi|8 : ctttaatatgctaaatatataATGCACCGTAACTG-TGAGATATACTCTAAAATGTAGGGAAATAGACATTGACCATTAGTCAGATGTCTGATAATTTGTTTAACTATTTGTTTAA--CT-------AT----------ATCTAAATCAGATATGGAAATACACAGTCAAGCATGCATGCCCGCA----------ACA-AT----ACACTATA--TTTTA--A-TAAaaaggtattgcagt
gi|8 : ata---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------AACC---------------------ATTATGCAGCA-TAGAGGCAGATACACACCGACATATGTATATACAAAAACACATATGATGCATGAAGAGCATGGTGTGGGGTATCAGGAAGAGTAACAAGACAAACAGGT----AGA----CT------TA-GAAACATGTGCAGATAAACTGCCAGAC-ATGAAACGCTGATAAACGCCGAGATCGAATCACTATCA-ACA--CACATATGC--AT------A------CA----G----AAAC-AAGTGCTTTGTATAACTGTAACTATT---TATCAA-ATTGA-T-T--TAATTTTAACGCCATGATAAGTA--CATCAA--TGTCA-------TATGTATAT--AAATAGGGTAATACAGATTGCACA-AA--CA-ACACAT---ATTGATTAACGATCGAAATTACGACCGATCAATAATTATTGTGGATCCGGTATGTCTATCTGCAAACGATACCGTC----TATGTTTACGTAC-TT---AAAGTTTGTAAATGGCCATTTAATCAATATA-ACAATGTGTGTGTACGCCATGTAATATaggaatcttgacaaatacatataaaacaatataatcggttataagagaaccattatgcagcatagaggcagatacacaccgacatatgtatatacaaaaacacatatgatgcatgaagagcatggtgtggggtatcaggaagagtaacaagacaaacaggtagacttagaaacatgtgcagataaactgccagacatgaaacgctgataaacgccgagatcgaatcactatcaacacacatatgcatacagaaacaagtgctttgtataactgtaactatttatcaaattgatttaattttaacgccatgataagtacatcaatgtcatatgtatataaatagggtaatacagattgcacaaacaacacatattgattaacgatcgaaattacgaccgatcaataattattgtggatccggtatgtctatctgcaaacgataccgtctatgtttacgtacttaaagtttgtaaatggccatttaatcaatataacaatgtgtgtgtacgccatgtaatatagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
gi|9 : ataatgcaccgtaactgtgagatatactctaaaatgtagggaaatagacattgaccattagtcagatgtctgataatttgtttaactatttgtttaactatatctaaatcagatatggaaatacacagtcaagcatgcatgcccgcaacaatacactatattttaataaaggaatcttgacaaatacatataaaacaatataatcggtTAAATGAAATAT------A------CA------A--TTTTGCAATTTAAA-TAAATATGCACCGTAAGTT-CGAGACATACTCTTAAATGCAGGGAAACATACATT-------ATTCAGATGTCAGATAATTTGTT------------TAA--CT-------AT----------ATTTGAATTAGATATGCAAATACACAGCCCAGCAAGCATGCCAGCAGATGGGGGTGACA--TCAAGACACAATAAGTTTGATGACTAACTGT----TT----CCTTTC----TGTT-GCCGAAAA----T---------AT------TTCATAA--CTTCATTTGCAAAAGC--CATACGTT-CTTCATTC----AACG-----------------AA---TCTGAGTAATAAA---------------------T-----------------------A--------------------TTAAACAGTATATACAGTT--ATT------AGAG-----------CAAC---------------------ATTATGCAAAC-TTGAGACACATACACACCGACATATCTACACACAAGGACATGGATAATGCAAAGAGGGCATTATATGGGGCATCAGGAAGAGATATAAGACAGACAGGT----AGA----CA------TA-TATACGTGTACTTGTATGCAACTAGGC-ATGGAACGCCGATA--------GATCGAGCCGCTAAAA-GTA--CA---------A-------A------CA----G----AAAC-AAATACTATGTATAGCTGCAACTGTTTAATATAAACATT---T-T--T-ATTTCAACGCCAAGATAACAA--CATCAT--TAATA-------TATGCATATAAAACTAAAGTGATAAAGATTAAACA-AA--CA-ACACATCTCATTGA-TAACGAACGAGATTACGACCG------AACAATTGTAGATCCGATGCGTCTGACTGCAAACACTAACGTC----TATATAAACATAC-TT---AATGTTTTTAGATGGAAATTTAAACAATATA-ACAATGTGTGTGTACGCCTTGTACTATagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
blockSeqs : AAATGTA TGTGGA AA A T A C TAACTATTTGTT AA ATATCTG CTTTGACTAT T T GC T A C A TG C CTGCTTC AATGC . TGTAATATCTAA CATA TA TTTA G C ATTA CCAATAAAATTTATCCAG GGC A TATAAAACAACACTATAAACGGTTATA TGTTTATAAGA ATAAACGGTTATAAGAGCAAC AA A T AGAA ATAGA TACGTG A G G C TT CATGCACATA CATGG A TAA C A T A CT T G TT AT TAATTTT AA A . AG C C AT GATCAAT TATA . AAA A T A G C TGATTA TCG GCAAATG ATGTAC A T A T CTCACCAT G TCCTCGTTGTGATTT G TTCCTCGTCAAATTCCG AA CTGAGC AATAC TATTT T TTAAAG TGAT T TAAT
blockSeqs : TAGTTCA TGTAGA . . A A A . . . . T C GC . . C A . . CTGCTTC T . TGTAATATCTAA . . CG . T . T . A ATACAAGATAATATCAACGATTATA . . C T A . A GAGA . T G . . ACTATACATA GATAA . . . A T . CT A C . . . . C . . . A TT G . . . A . A G C TGATTA . CATG ATATAC . . . A CAGACCAT . . . TCCTCGTCAACTTCCT AT . . TATAT T . T T .
blockSeqs : A . . . A . G . . . . T T GC . . C T . . CTGTTGT T . TGTCTTCAT . . AC . A . G . T TATAAAACAATATAAACGGTTATA . . A G T . C GAC . G G . . CATATACATA AACAG . . . A . . C . G . . . . A . . . A TT A . . . A . A G . . . A . . . . T CTCACCAC . . . TCTCGTCAAATTCAT AA . . AATTG T . G T .
blockSeqs : A . . . A . A . . . . T A GT . . A A . . CTGAAAT T . TGTCGTCTT . . AA . C . A . A TATAAAACACAATAAACGGTTATA . . C A A . A . . . G . . CATATGCATA G . . . A . . A . C . . . . C . . . A TT G . . . A . G G . . A . . . . T CTCACCAC . . . AATTTCT A . . AATTT T . T T .
blockSeqs : A . . . T . G . . . . T T TC . . C T . . CCGATTT T . TGTCTGTAT . . CA . G . G . A TACAAGATAATATCAACGATTATA . . A G G . A . . . G . . CCTATA G . . . A . . . . G . . . . A . . . C AT T . . . A . A G . . G . . . . T CCCT . . . A T . . TATTT G . A T .
blockSeqs : G . . . G . C . . . . T T AT . . C T . . CCGATTT C . TATCTATAG . . AA . T . A . T TATTAAACAATATTAACGGTTACA . . A A A . A . . . A . . TATA G . . . C . . . . C . . . . C . . . A TT G . . . T . A G . . T . . . . A CACT . . . A A . . TATTA T . G G .
blockSeqs : A . . . A . A . . . . T T AT . . C A . . CTGCTTC C . TGTCTTCAT . . AA . G . C . T TTTAAAACACTATAAAAGGTTATA . . A G A . A . . . G . . CATA G . . . C . . . . C . . . . A . . . A AA T . . . C . A G . . G . . . . T CCAG . . . A T . . TAAT T . G . .
blockSeqs : A . . . A . A . . . . G T AT . . C T . . CTC C . TGTCTTTTT . . AC . G . C . T TATTAAACAGTATATACAGTTATT . . G A T . A . . . G . . CAAA G . . . G . . . . C . . . . C . . . A AA G . . . C . . . . . G . . . . T CACT . . . T T . . TA T . G . .
blockSeqs : A . . . A . C . . . . G T GC . . C A . . TTA A . AATAT . . AC . T . A . T TATAGAACAATT . . G A T . A . . . G . . CCTA G . . . A . . . . C . . . . C . . . C TT T . . . C . . . . . T . . . . T ACT . . . A A . . TT T . G . .
blockSeqs : A . . . A . A . . . . G T GC . . C G . . TTT A . AAA . . AC . C . G . A TATA . . C A A . A . . . . . . TA G . . . G . . . . T . . . . A . . . C AA T . . . T . . . . . T . . . . A CT . . . A A . . . . . G . .
blockSeqs : A . . . A . A . . . . G T GG . . . A . . TTC C . TAG . . CG . T . A . T TATA . . A G A . . . . . . . . AA . . . . . . . . . A . . . . C . . . A TT G . . . A . . . . . G . . . . A C . . . . T . . . . . T . .
blockSeqs : A . . . A . T . . . . T . . . . . A . . T T . TG . . CA . . . . . . TATA . . C A . . . . . . . . . . . . . . . . . A . . . C A G . . . T . . . . . . .
blockSeqs : A . . . . . C . . . . G . . . . . T . . . T . . . . ATA . . . A . . . . . . . . C T .
blockSeqs : . . A . . . . G . . . . . G . . . . . . . . .
blockSeqs : A . . . . . . . .
blockSeqCons : CCGNTTC**** TGTCTTAN**************** **
originalCons : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNA--A-TAACTTA----TT----CCATTC----CCTT-GTCGAA------T---------AN------TC----G--CTTCATTTGTAAAAGG--AATACGTT-CTTCATNC----AACG-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
finalCons : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNA--A-TAACTTACCGNTTC----CATTC----CCTT-GTCGAATGTCTTAN----------------TC----G--CTTCATTTGTAAAAGG--AATACGTT-CTTCATNC----AACG-----------------GA---TCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTATTTTTGAAAATGACTTTCTGCAATAATTTCTTATGTAGTGCAGAAAGACATTTTTATCGCACTGTAAATCAACCGATATTTAATAGTTACCACTGAATCTTGCTAATAAATGGCTGTTTGAATGTGTTAAT
Unaligned ( gi|35 ): GAATACGAAGACATAGTAGACAATATTTCCAACCATAATGTATTTTGTTCGGATGGTTTGAGTTCTG
Unaligned ( gi|37 ): ACATGCACGTACACTGAACGTTTTATCAGACAATACTGTGGAAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 111111 111111111111 1111111111 111111 11111111 33333333333333333 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 11111111111 222222222222222222222 222222 1 222222222222222222222222 111111111 11 1111111 11 111111 1111111 111111 222222222222222 222222222222222 777777777777777777777777 111 2222222 1
lowQualScore : 8888888888888 666666 33 2 2 5 1 222222222222 33 8888888 0000000000 1 1 33 2 2 5 1 222222 7 55 11111111 44 99999999999999999 3 555 0 44 0 2 2 2 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 33333333333 444444444444444444444 66 2 2 6666 66666 000000 3 3 3 3 44 333333333333333333333333 555555555 3 555 3 4 6 3 77 6 4 33 33 8888888 33 4 2 33 2 3 55 2222222 6666 3 555 1 3 8 2 0 0 00 0 777777 555 6666666 777777 3 3 3 1 999999999999999 3 000000000000000 3 222222222222222222222222 111 999999 88888 4444444 0 1 0 888888 0 6666 0 3 0 6666
lowQualScore : ............. ...... .. . . . . ............ .. ....... .......... . . .. . . . . ...... . .. ........ .. ................. . ... . .. . . . . ................................................................................................ ........... ..................... .. . . .... ..... ...... . . . . .. ........................ ......... . ... . . . . .. . . .. .. ....... .. . . .. . . .. ....... .... . ... . . . . . . .. . ...... ... ....... ...... . . . . ............... . ............... . ........................ ... ...... ..... ....... . . . ...... . .... . . . ....
lowQualScore : 5555555555555 444444 99 9 0 3 0 888888888888 44 1111111 9999999999 5 1 66 5 7 0 0 555555 7 22 22222222 22 22222222222222222 1 444 7 22 7 1 6 8 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 66666666666 333333333333333333333 44 7 1 5555 99999 888888 1 3 8 3 66 888888888888888888888888 444444444 3 444 1 5 2 1 77 2 7 99 99 7777777 99 3 7 77 7 9 66 1111111 5555 1 444 0 3 6 5 5 3 22 5 777777 444 3333333 777777 3 3 3 8 777777777777777 3 888888888888888 3 777777777777777777777777 000 666666 33333 1111111 5 2 8 888888 4 2222 2 4 4 5555
consensus : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNAATAACTTAC-CG--NTTCCATTCCCTTGTCGA--------A--TGT--------C-T-T-A-TT-C---GCTTCATTTGTAAAAGG--AATACGTTCTTCATCCAACGGATCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
Reference ( family-6834 ) : TAAATGCTATAT------A------CA------A--TTTTGCAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTNAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACACAATAATTTTNAATAACTTAC-CG--NTTCCATTCCCTTGTCGA--------A--TGT--------C-T-T-A-NT-C---GCTTCATTTGTAAAAGG--AATACGTTCTTCATNCAACGGATCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACGCACCGACATATGTTCACACAAGGACACAGATAATGCATGGNGAGCATTATGTGGGGCATCAGGAAGAGATACAAGACAGACAGGT----AGA----CA------TA-TAGACATGTGCGGATAGGCAGCCAGAC-ATGAAACGCCGATAGACGCCACGATCGAGCCGCTAACA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-T--T-ATTTCAACGCCACGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AA--CA-ACACATATCATTGANTAACGATCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGCAAACGCTACCGTC----TATATATACATAC-TT---AANGTTTTTAGATGGAAATTTATACAATATA-ACAATGTGTGTGTACGCCTTGTAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AACTCGTTAATAAACA---TA------GTAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGTATA--C--A---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-N-GCAAAAT------AA-----ATTAATGGTTA-T-T-ATACTACGACTAAATATATTGGAATTGAAGTTATTTATTGATTGCT------TTCAACAGTATTCACTGAAACGAAAA-G--GACACACACGTCTATCTTCATATGGTATTTTTACTTACATGAATTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGCAATATTCCTAGCCATTCTGTATA
gi|1 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAA-TATATTTGCACCGTAACTT-TGATATATACACTTCAATGTAGGGAAA-AGACATTGGCCATTATTCAAATGTCTGATAATTTGTT------------TAA--TT-------AT----------ATCTGAATTTTATATGCCAATACACAGTCAAGCATGCATGCCCGCAGATAGGTTTAACA-ATCA-GAAACAATAATTGTTGATAACTTAC-C
gi|1 : cttaaatatgctaaatcaataATTTCTACGAGG--AATACTTTCTTTATTTAACCGATCTGAGTAATAAA---------------------T-----------------------A--------------------TAAAACAATATCAACGGGTATA--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGAGACAGATACCAACTGGCATGTGTTTACACAAGGACAAAGATGATACATGGTGAGCATTATGTTGAGCATCAGGAAGAGATTCAAGGGAGACAGTT----AAA----CA------TA-TAGACATGTGCGGACTGGCAGCCATACGAT-AAATGCCGATAGACGCGACGATCGAGCCGCTAGCA-ACA--CC------C--AT------A------CA----G----AAAC-ATGTTCTATGTATAACTGTAACTATT---CATCAA-ATTAA-T-TA-T-ATTTCAAAGTCA-GATTAC-A--CATAAA--AAATA-------TAtggcttaggaagaaacaatgtatttctacgaggaatactttctttatttaaccgatctgagtaataaatataaaacaatatcaacgggtataagagcaacatcatgtaaaatagagacagataccaactggcatgtgtttacacaaggacaaagatgatacatggtgagcattatgttgagcatcaggaagagattcaagggagacagttaaacatatagacatgtgcggactggcagccatacgataaatgccgatagacgcgacgatcgagccgctagcaacacccatacagaaacatgttctatgtataactgtaactattcatcaaattaattatatttcaaagtcagattacacataaaaaatataattgattaacgatagaaataacgaccggaagattgtgtatccgatgtgtctgcctgcaaacattaccgtctatatatacatactttaatgtttttagatggaaattgatacagcataacaatgtgtgttcgcctgaaatatttattttaataacctaatatagcattacgtgaaaaaatgatctcgtttataaacatattacgtatattctgtgtgtagaaaatagagtaaacaagcattactattttcctcgttgtattttatgacagaatctgtgcaatataaagtaatggttatttgtactacgaaaaaatatattagaattgaaaatatctattgattccttccaacagtatttattgaaacgaaaaggacatataggtctatcttcatatggtatttttacttacataaatttcaaatcaaaaggaacaagatcatgtagtcggcactttccctagccattccgtaacttattcag
gi|1 : cttaaatatgctaaatcaatataaatgttatatacaattttgcaattaaaatatatttgcaccgtaactttgatatatacacttcaatgtagggaaaagacattggccattattcaaatgtctgataatttgtttaattatatctgaattttatatgccaatacacagtcaagcatgcatgcccgcagataggtttaacaatcagaaacaataattgttgataacttacctggcttaggaagaaacaatgtTAACTATTCATCAAATTAAT------------TATAT--TTC-AAAGT----CAGATTACACATAA--AA-A---ATATAATTGATTAACGATAGAAATAACGACCG------GAAGATTGTGTATCCGATGTGTCTGCCTGCAAACATTACCGTC----TATATATACATACTTT---AATGTTTTTAGATGGAAATTGATACAGCATA-ACAATGTGTGT-T-CGCC-TGAAATATTTATTTTAATAACCTAATATAGCATTACGTGAAAAAATG------ATCTCGTTTATAAACA---TA------TTAC------GTATATTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---A--G--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GCAATAT------AA-----AGTAATGGTTATT-T-GTACTACGAAAAAATATATTAGAATTGAAAATATCTATTGATTCCT------TCCAACAGTATTTATTGAAACGAAAA-G--GACATATAGGTCTATCTTCATATGGTATTTTTACTTACATAAATTTCAAATCAAAAGGAACAAGAT----CATGTAGTCGGCACTTTCCCTAGCCATTCCGTAattgattaacgatagaaataacgaccggaagattgtgtatccgatgtgtctgcctgcaaacattaccgtctatatatacatactttaatgtttttagatggaaattgatacagcataacaatgtgtgttcgcctgaaatatttattttaataacctaatatagcattacgtgaaaaaatgatctcgtttataaacatattacgtatattctgtgtgtagaaaatagagtaaacaagcattactattttcctcgttgtattttatgacagaatctgtgcaatataaagtaatggttatttgtactacgaaaaaatatattagaattgaaaatatctattgattccttccaacagtatttattgaaacgaaaaggacatataggtctatcttcatatggtatttttacttacataaatttcaaatcaaaaggaacaagatcatgtagtcggcactttccctagccattccgtaacttattcag
gi|10 : cttaaatatgctaaatcaatataaatgttatatacaattttgcaattaaaatatatttgcaccgtaactttgatatatacacttcaatgtagggaaaagacattggccattattcaaatgtctgataatttgtttaattatatctgaattttatatgccaatacacagtcaagcatgcatgcccgcagataggtttaacaatcagaaacaataattgttgataacttacctggcttaggaagaaacaatgtatttctacgaggaatactttctttatttaaccgatctgagtaataaatataaaacaatatcaacgggtataagagcaacatcatgtaaaatagagacagataccaactggcatgtgtttacacaaggacaaagatgatacatggtgagcattatgttgagcatcaggaagagattcaagggagacagttaaacatatagacatgtgcggactggcagccatacgataaatgccgatagacgcgacgatcgagccgctagcaacacccatacagaaacatgttctatgtataactgTGCTATAT------A------AATGTGGAA--TTTTGCAATCAAAT-TATATATGCACCGTA--TTATGAGACATACTCTTCAATACAGAGAAATAGACATTAATCATTATTTAGATGTCTGATGATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATGCCAGCAGATGGGCGTGACA-ATCA-GACA-AA-AATTT-AAATAACTTAC-TG--CTTCCAATCTCTTGTCCA--------A--TGT--------C-T-TCA-TT-C---GCTTCATTTATAAAAGG--CGTACGTTCTGCATCCCACATATCTTAGAAATAAA---------------------TATAAAACAACACTATAAACGGTTA--------------------T--------------------A--------AGAG-----------TAAC---------------------ATCATGTAAAC-AAGAGACATATA-ACACTAACATATTTATACACAAGGACACAGATAATGCATGGTGAACATTATATGGGGCATTAGGAAGTGATACAAGACAGACGGGT----AGA----CA------TA-T--ACATGTACGTGTAGGCAGCCTGAC-ATGAAACGCCGATAGACGTCACGATCGAGCCGCTGACA-ACA--CA------T--AT------A------CACATGG----AGAC-AAA-AGTATGTAAAAGTGTAAATGTT---TATC---ATT---T-T--T-TTTTT------------ACTA--CATCAA--TAATA-------TAAGTATAA--AAGTAAGGTGATACAGATTTAACA-AA--CA-ACACATCTCATTGAATAACGATCGAAATTACGACC---------TG--TGTGGATCAGATGTGTGTGCTTGCAAACGCTACCGTC----TTTATAAATATAC-TA---ACAGTTTTTAGATGTAAATTTATACTATATA-ACAATGTGTGTGTACGTCTTacttattcag
gi|11 : ctttaatatgcaaaatctatatgctTAAATGCTCTAT------A------CA------C--TTTTGCAATTAAAA-TGCATATGCACCGTATCTT-TGAGACATACTCTTAAATGTAGGTAAGTAAATACTGACCATTATTCAAATGTCCTATAAATTGTA------------TAAAACT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGCATGCA-----------------G------CA-GACACAATATTTTTAAATAACTTACTCA--ATTTAATGCC-TTGTGGA--------A--TGT--------CGT-C-T-TT-C---GTTTCTTTTATTAAAGG--ACTATGTTTTTCATTTTTCGGATCTGCGAAATAAA---------------------T-----------------------ATAAAACAATATAAACGGTTAT--------------------A--------GGAG-----------CAAC---------------------ATTATACAAAAACAGAGACAGATACTCACCGATATATGTATACATAAGGACATAGAAAATTCATGGAGAGCAAATTGTCGGGAAGCAAGAAGATATACAAGACAGACAGGT----GG-----CA------TA-TAGACATTAACGGATAGGCAGCCAGACGAT-AATCGTTGATAGACGCCAATATCTAGCCGCTAACA-ACA--CA------C--ATGCACATA------CA----G----AAAC-AATAACTATGTATGACTGTAACTATT---TATCAA-ATAAA-T-TC-T-ATTTTAACGCCAGGATAACTA--CACCAA--TAATA-------TATGTATAT--AACTAAGCTGATACAGATTACACA-AA--CA-ACACACATCATTGATTAATGATCGAAATTACGACCG------TACGATTGTGGATCCGACGTtttat
gi|11 : tttaatatgctaaatcaataCGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTtacgtgaataaatgtgattaaactcgttaataaacataatacgtatagtctatgtgt
gi|12 : tttaatatgctaaatcaatataaatgctctatacacttttgcaattaaaatgcatatgcaccgtatctttgagacatactcttaaatgtaggtaagtaaatactgaccattattcaaatgtcctataaattgtataaaactatatctgaaacatatatgcatatacacagtcaagcatgcagcagacacaatatttttaaataacttactcaatttaatgccttgtggaatgtcgtctttcgtttcttttattaaaggactatgtttttcatttttcggatctgcgaaataaatataaaacaatataaacggttataggagcaacattatacaaaaacagagacagatactcaccgatatatgtatacataaggacatagaaaattcatggagagcaaattgtcgggaagcaagaagatatacaagacagacaggtggcatatagacattaacggataggcagccagacgataatcgttgatagacgccaatatctagccgctaacaacacacatgcacatacagaaacaataactatgtatgactgtaactatttatcaaataaattctattttaacgccaggataactacaccaataatatatgtatataactaagctgatacagattacacaaacaacacacatcattgattaatgatcgaaattacgaccgtacgattgtggatccgaAATGCTGTAT------A------CA------A--ATTTGCAATTAAAA-TACATATGCACCGTAATTT-TGAGACATACTTTTGAATGTAGAAAAATAGACTTTGACCATTATTCAGATGTCTGATAATTTGTT------------TAT--CT-------AT----------ATCTGAATC-TG-ATGCAAATACACAGTCCAGCATGCATGCCCGCAGACGGGCGTGACA-ATCA-GACACAGCAATTTTTTAT---TTAT-CA--TTT-------CTTG-----------------------------------C-C---GCTTTACTTGTAAAAGG--AATATATACTTCATACAACGAATCTGAATAACACA---------------------T-----------------------A--------------------T--------------------AGAACAATTAAAGTGTTTATAAGACGAC---------------------ATCATGTAGAA-TAGAGACAGACACGCACCGACATATGTTCGCACAAGCACACAGAGATTGCATGGTGCTAATTATGTGGAACATCAGAAATAGATACAAGACAGACAGCT----AGC----CA------TA-TAGACATGTGCAGATAGGCAGCCAGAC-ATGGAACGCCGATAAACGCCACGATCAAGCCGCT----------------------T------A------CA------------------ACTATTCATAACTGTAAATATT---CATCAA-ATTAATT-T--T-ATTTCAACGGCACGATAACTT--TATCA----------------------AT--AACTAAGGTGATACAGATTAAACA-AA--CA-GCACATATCATTGATTAACGATCCAAATTACGACCA------AACGATTGT-GATCCGATGTGTCTGCCTGCAAACACTACCGTA----TTTATATACATGC-TT---AAAGTATTTAGATGGAAATTTATACAATATA-ACAA--TATGTGTACACTTTGAAATAT
gi|13 : atatgctaaatcactattAATGCTATAT------AAATGTACA------AAATGTTGCAATTAAAA-TACATATGCACCGTAACTT-AGAGACATACTCTTAAATGTAGGGAAATAGACATTGACCATTATTCAGATGTCTGATAATTTGTT------------TCA--CTATATCTGAT----------ATCTGAATCATATATGCAAATACGCAG-CAAGCATGCATGCCCATAGATGAGCGTGACA-ATTT-GACACCGTAATTTTAAATAACTTAC-TG--CTTCCAATCTCTAGTCCA--------A--TGT--------C-TGT-A-TT-C---GCTTCATTTGTAAAAGA--CATACGTCCTTCATCAAACGGATCCGAGAAATAAA---------------------T-----------------------ATAAAACACAATAAACGGTTAT--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAC-TAGAGACAGATACACAATGACATATGTCCACACAAGGACACAGATAATGTACGGAGAGCGTTATTTGGGACAGCAGGAAGAGATACAAGACAGACAGGT----AG--------------A-TAAACATATGCTGATAGGCAACCAGAaac
gi|14 : ctttaatatgctaaatcaatattTGAATGTAGGGAAACAGACATTGGCCATTATTCAGATATCTGATGATTCGTT------------TAA--CT-------AT----------GCCTGTATTATAACTGCAGACACACTGCCAAGAAAGCATAGCGGCAGA------TGAAATATCA-GACAAAATAACTATTAATAACTTAC-TG--TTGTCACTCTCTCGTTGAAAAATCCTA--TGTGGAAAAAGT-T-T-A-TT-CGCTGCTTCACGCATTAAACGCCAATAAA--ATTTATCCAGAGGCTCTGAGAAATAAA---------------------T-----------------------A--------------------T--------------------A--------CGA------------CAACATAAACGGTTATAAGAGCAACATCATGTAAAA-TAGAGACAGATACGAACCGACATATACTCGCACAAGGACAAAGATt
gi|15 : atgtaaccatagatatatatgtgataTAATAAACTAATATAGTGTTACGTGATTACATG------AACTCGTTAATAAACA---TAGCAAATGTAC------ATATAGTCTGTGTGTAG-A-AAA-AAGAGTATACTC--A---CCAT--CATTACTAAG-T---------------TCTTCGTT-GTGTTTTTTCCTCGTCAAATTCCG-------TGGCAGAATCTG-A-GCAAAAT------AA-----ATTAACGGT--------TACTACGACTAAATATTTTGGAACTGAAGTTATTTATTGATTGCA------TTCAACAGTATTCACTGAAACGAAAA-T--GTCTCACACGTCTATCTTCATATGGTA-TTTTACCTA-AT---TTTCAAATCGAAAGGAACAAGAA----TATGTAGTCGGTAATATTCCTAGCCATTCTGT
gi|16 : CGTTACGTGAATAAATGTGATTAAACTCGTTAATAAACA---TA------ATAC------GTATAGTCTATGTGTAG-A-AAA-TAGAGCAAA--C--C---C--T--CATTACTATT-T---------------TCCTCGTT-GTATTTT----------------A-------TGACAGAATCTG-T-GAAAAAT------AA-----ATTAATGGTTATT-T-ATACTAAGACT--ATATATTAGAAT-----TTATTTCTTGATTGCTTTAAAGTTTAACAATGTTCATTGAAACGAAAA-G--GGTACAGACGTCTATCTTTATATGGCATTTTTATTAACAGGAATTTCAAATCGAAAGGAACAAGAA----TACGTAGTCGGCAATATTCCTAGCCATTCTGTATAtt
gi|17 : AATATAGTGTTTCGTGAATACATA------AATTCGTTAATAAAC-----------------------------CTA-GTGTAG-G-AAA-TAGAGGATA--C--AGACCA-T--CATTACTATT-T---------------TCCTCCTT-ATCTTTTTCCTCGTCA-------ACTTCCT-TGGCAGAATCTG-AAGCAAAAT------AG-----TTTAATAGATA-TAT-ATAAAACGAATACATATTTTAGAACTGAAGTTATTGTTTGATTTCT------TTCAACAGTATCCGCTGAAACGAAAATGATGACATAAACGTTTATCTTCATATGGTA-TTTTACTTACATGAATTTCAAATCGAAAAGAACAAGAATAATTATGTAGTCAGCAATTTTCCTAGCCATTCTGTttactcaaatgct
gi|18 : TGATGTAGTGTAACGCAATTACATG------AACTCGTTAATAAACA---TA------GTAA------GTATAGTCTGTGTGTAG-A-AAA-TAGAGTATA--CTCA---C--CACCATTACTATT-TTCCTCGTTGTGATTTTCCTCGTC-AAATTCC----------------A-------TGGCAGACTCTG-A-GTAAAAA------AA-----AATAATGGTTA--------CTTTGACTAAATATTTTGGAATTAAGGTTATTCATTGATTGCT------TTCAACAATATTCACTGAAACGAAAA-T--GACTAACACGTCTATCTTTATATGGTA-TTCTACTTACATGATTTTCAAATCGAAAGGAACAAGAA----TATGCAAACGACAATATTCCTAGCCATTt
gi|19 : gAATAAACTAATATAGTGTTACGTGAACACTTA------AACTCGTAAATAAACATCGTACAT---GTAC------GTATAATATAT-TTTA--A-AAA-TAGAGTAT------A---C--T--CACCAC----------------------CCTTGTT-GTATTTA----------------AATTTCT-TGACACAATCTGAT-ACAAAAT------AA-----ATAAAAGGTAA-T-TGATACTACG-CAAAATATATTGGAAT----GCTATTTATTGATTGCT------TTAAAAAATATTTAATGAAACGAAAA-A--GACACATACATTT-TCTTCATATGGTA-TTTTACTT------ATTTCAAATGGAAAAGAACACGAC----TATGTAGTCGGTAATATTCCTTGCCATT
gi|2 : TAAATGCTATAT------G------CA------T--TTTTGAAATTAAAA-TACATATGCACCGTAACTT-TGAGACATACTCTTCAATGTAAAGAAAAAAATGTTGACCATTATTCAAATGTCTGATAATTGGTT------------TAA--CT-------AT----------ATCTGAATTATATATGCAAATTCACAGTCAAGCATGCATGCCCGCAGAAGGGTTTAATA-ATCA-GAAACAATAATTTTTAATAACTT-------GTTACATTCCATTGTCGA--------A--T----------------A-GT-C---GCTTGATTTGTACAAAG--AATATGTTCTTCATTCAACGAATCTGAGTAATAAA---------------------T-----------------------A--------------------T--------------------A--------A---------------AAC---------------------ACCGTGTAAAA-TAGAAACAGATACACATCGGCATGTGTTCACACAAGGACACAGATAATGCATG---AGTATAATGCGGTGCATCAGTAAGAGATACATGACAGACAGGT----AGA----TA------TA-TAGACATGTGCGGAAAGGCAGCCAGACTATG-AGCGCCGATAGACGCGGAGATCAAATCACTATCA-ACA--CA------C--AT------A------CA----G----AAAC-AAGTACTATGTATAACTGTAACTATT---TATCAA-ATTAA-T-G--T-ATGTCAACGCCAGGATAACTA--CATCAA--TAATA-------TATGTATAT--AACTAAGGTGATACAGATTACACA-AAAGAA-ACACATATCATTGATTAACGAACGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTAGCTGCAAACGCTACCGTC----TATATATGCGTTC-TT---ATAGTTTTTAGATGGAAATTGATACAGTATA-AC-AT-TGTATGAACGCGTTGAAATATTT-CTTCAATAATCTAATAAAGAGTTACGTGAATAAATG------ATCTCGTTTATAAACT---TG------TTAT------GTACAGTCTGTGTGTAG-A-AAA-TAGAGTAAA--C--A---C--T--CATTGCTATT-T---------------TCCTCGTT-GTATTAT----------------A-------TGACAGAATCTG-T-GGAAAAT------AA-----CTTAATGGTTA-A-T-AT-CTACTACTAAATATATATGAATTGAAAATATTTATTGATTTCT------TTCAACAGTATTAATTAAAACGAAAA-G--GAAACACACGTCTAACTTAATATGGTATTTTTACAGACATGAATTGCAAATCGATAGGAACAAGAA----TATGAAGTCGGCAATATCCCTTGCCATTCTGTATA
gi|20 : AATATAGTGTTACTTGAACTCTTA------AACTCGTAAATAAACA---TA------GTACATGTACGTATAATCTATGTGTAA-A-AAAATAGAGTATA--C--------------TCACCAT-------------------CCTTGTT-GCACTT---------------------------ACATT-TCTT-T-ACACAA--------A-----GGTAAC------T-T-ATACGACGACAAAATATATTGGAATGAAAGTTATTTATTGATTGCT------TTCAA-AATATTTACTGAAACGAAAA-G--GACACATACATTT-TCTTCATATGTTTTTTTTACTTA-------TTTAAATGGAAAGGAACAAGAA----TATGTAGTTGGTAATATTTCTAGCCATT
gi|21 : TAACTGTAACTATT---TATCAA-ATTAA-TAC--T-ATTTCAACGCCACCATAACTT--CATCAA--TTTTA-------TATGTATTT--TAG-AAGGAGATACAGGTTTAACA-AA--CA-ACACATCTCATTGAA-AACGCTCGAAATTACGACCT------A-----TGTGGATCCGATGTGTGTGCTTGCAAACACTACCGTC----TATACAAACATAC-TA---AAAGTTTTTAGATGGAAATTTAATCAATATA-ACAATGTGCGTGTACGCCTTGTAAT------TTAAATAA
gi|22 : TAAATGCTCTTT------A------CA------A--TTGTGCAATTAAAA-TACACATGCACCGTATTTT-TGAAACATACT--TAATTGTAGGGAAGTAGACATTGACCATTATTCAAATGTCGTATAAATTGAT------------TAA--CT-------AT----------ATCTGAAACATATATGCATATACACAGTCAAGTATGC-----------------------GTCA-GACACAATAATTTTAAATAACTTAC-TGAAATT--ATTGCCTTGTGAA--------A--TGT--------C-G-T-ATTT-C---ATTCCATTTATtattg
gi|23 : ctttaatatgctaaatcaataAACTAATATAGTGTTACGTGAACACTTA------AATTCGTAAATAAACA---TA------GTACATATACGTATAGTCTATGTGTAA-ATAAA-CAGAGTATA--C---------T--TACCACTGTTGT---------------TGCTT-TT-ACATTTC----------------T-------TGACACAGTCTG-AAGCAAAAT------AA-----ATAAATGGTAA-T-TTATATTACGACAAAATATATCGGAACTGAAGTTATTTATTGATTGCT------TTCAAAAATATTTACTGAAACGAAAA-G--GACACt
gi|24 : ATAAACTAATATAGTGTTACGTTTTTACATG------AACTCGATAATAAACA---TA------TTAC------GTATAATCTGTGTGTAG-A-AAA-TAGAGTATACTC--A---CCAC--CATTACTCAT-T---------------TCCTCGTTGGGATTTTTCTCGTC---------AAATTCATTGGCAAAATCTG-A-GCAAAAT------AT-----ATTTATGGT--------TACTACGACTTAATATTTTGGAATTGAAGTTATTTATTGATTATT------T
gi|26 : AATAAACTTATACAACGTTACGTAAATAAATG------AACACGTAAATACACA---TA------TTAC------GTATAGTCTATGCGTAGAA-AAA-AAGAGTAAA--C--C---A--G--CATTACTATT-T---------------TTCTCTTT-GTATTTT----------------A-------TGACAGAATCTG-A-GCAAAATCTGAGCAAAATACATTTATGGTTATT-T-ATACTACGATTA
gi|27 : TTGAAGCTATTTATTAATTGCT------TTCTAAAGTATTCGTTGAAACGAAAA-G--GACACACGCGTTTATCTTCATATGGTATTTTTATTTACATGAATTTCAAATCGAAAGGAACAACAA----TATGTTGTCGGCACTATTCCTTGCCATTC
gi|28 : TAGATACTATATTAGTTCA------GA------A--TTTTGCATTTAAAA-TAAAAATGCACCATAGCTT-TTAGACATACTCTTAAAGGTAGAGAAATATACATTGACTATTATTCAGATGTCTGATAATTTG
gi|29 : tttaatatgcttaatcaataATTTATTGATTTAT------TTCAACAGTATGTATTG---------------CACAGAAGTCTATCTTCATATGGTATATTTACTTACATGAATTTCTAATCGAAAGGAACAAGAA----TATGTAGTCGGCACTATCCCTAGCCATTTTGT
gi|3 : TAAATGTTATAT------A------CA------A--TTTTGCAATTAAAAATACATATGCAACGAAACTT-TGAGACATACTCTTCAATGTTGGGAAATAGATATTGACCATTATTCAAATGTCTGATAATTTGTT------------TAC--CT-------AT----------AT-------------GCACATACAAAGTTAAGCGTGCATGCCCGCAGATGGTCGTGACA-ATCA-GACACAATCATTTTTAATAATTTAC----------ATTCCATCGTCGA--------A--TAT--------C-TAT-A-GT-C---GCTTCATTTATACAAGG--AATATGTTCT----------------------------------------------------------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ATCATGTAAAA-TAGCGGCAGATACGCACTGACATTTATTCACACCAGAACACAGATATTGTATGGGGAACATTATGTAGGACATCCGAAAGAGACACAAGACAGACAGGTAGAAAGA----CA------TA-TAGACATGTGCAGATAGTCAGCCAGACGAT-AATCGCCGACAGACGCCACGATCGAGACGCTAACA-ACA--CA------C--AA------A------CA----GATAAAGAA-AAGTATTATATATAACTGTTACTATC---TATCAA-ATTAA-T-TA-T-ATTTTAACGCCAGGATAACTA--CATCAA--TAATATAATTTTTATGTATAT--AACTAAGGTGATACACATTACACA-AA--AA-ACACATATCA------------------TACGACCG------AACGATTGTGGATCCGATGTGTCTGCCTGAAAATGCTACCGTC----TAAATATAGATGA-TT---AAAGTTTTAAGACGGAAATTTATATAGTATA-AT----TGTGTATACGCCTTGAAATATTT-CTTTAATAAACTAATATAGCGTTACGTGAATACATG------AAATCGTTTATAAACA---TA------GTAC------GTATAGTCTCTGTGAAG-A-AAA-AAGAGTAAA--C--A---C--T--CATTACTATT-T---------------ACCTCGTT-GTATTCT----------------A-------TGACATAATCTG-T-GCAAAAT------AA-----ATTAAAAGTTA-T-TAATACAACGACTAAATATATTAGAATTGAACATATTTATTGATTTCT------TTCAACAGTATGTATTGAAACGAAAA-G--GGCAAACAGGTCTATCTTCATATGATAGTTTTACTTGCATGAATTTCAAATCGAAAGGAACAGGAA----TATGTAGTTGGTACTAACCCTAGCCATTCTGTATAttct
gi|30 : taaatatgattaatcaataACA-AT--CA-ACAAATATCATCGAATAACGATCGAAATTACGACCT------AATAATTGTGGATCCGA----------TGCAAAAGCTACCATC----TATATATACATAC-ATAAAAATATTTTGAG-TGAAAGTtaactcagatgt
gi|31 : AACA-------AACGTATAT--AACTGATGCGATAAATATTAACCA-AA--CA--CATATATTATTGATTAATGTTCGAAATTACGACCG------AACGATTGTGGATCCGATGTGTCTTCCTGCAAATGCTACCaaaaaacaaca
gi|32 : GTATTCACTGAAACAAAAA-T--TGCTCACACGTCTATCTTCATATGGTA-TTTTACTTACATGATTTTCAAATCGAAAGGAACA
gi|33 : AACAAGAA----TATGTAGTTGTCAATA-TCCTCTCCAT
gi|34 : tat------------TAA--CT-------AT----------ATCTGTATCAGATATGCAAATACACCATCAAGTATGCATGCCCGCAGATTGATGTGACA-Aggagtatattactcagatgttatgcgttctgaaact
gi|36 : ACAAGAA----GATATGGTCAGTAATATCCCCAGCCATTGGGTAT
gi|4 : TGTAC------A------TA------A--TCTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGACGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCATCAAGCATGCATGCCCGCAGATGGATGTGACA-CTCA-GACA-AATAATTTTAAAACACGTAC-CG--ATTTCGTTCATTGGTCGA--------A--TGTAATA----T-C-T-A-AT-C---GCTTCATTTGTCAAACG--ACGACGTTCTTCATGCAAAACATCTGAGTAATAAA---------------------T-----------------------ACAAGATAATATCAACGATTAT--------------------A--------AGAT-----------CAAC---------------------ATCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAGA--TA-TAGACATGTGCGGATAGACAGCCAGAC-ATGAAACCCCGATAGACACCACGATCGAGACGCTGACA-ACA--CAACTATAC--AT------A------CA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACTTTACACA-AA--CA-ACACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTTTCTGCCTGCAATCGCTTCAGCC----TATATATACATAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATtttacttggatgttctgagt
gi|5 : ctttaatatacttaaacaatatatatactatattaaTGTAC------A------TA------A--TTTTGCATTTGAAA-TACATATGCACCGTAACTT-TTAGATGTACTTTTAAATGTAGGGAAATATATATTGGCCATTATTCAGATGTCTGATAAT----------------------CT-------AT----------ATCTGAATCAGATATGCAAATACACCGTCAAGCATGCATGCCCGCAGATGGATGTGACA-CTCA-GACA-AATAATTTTGAAACACTTAC-CG--ATTTCGTTCATTGGTCGA--------A--TGTAATA----T-C-T-A-AT-C---GCTTCATTTGTCAAACA--ACGACGTTCTTCATGCAAAACATCTGAGTA-TAAAATACAAGATAATATCAACGATT-----------------------A--------------------T--------------------A--------AGAG-----------CAAC---------------------ACCATGTAAAG-TAGAGACAAATACACACCGACATATGTTCACACAAGGACATAGATAATTCATGGAGAGCATTACGTTTGGCATCAGGAAGAGATGCAAGACAGACAGGT----AGA----TAGAC---TAATAGACATGTGCGGATAAACAGCCAGAC-ATGAAACCCCGATAGACACCATGATCGAGACGCTGACA-ACA--CA------C--AT------ATACATACA----G----AAAC-AAGTTTTATGTATAATTGTTACTATT---TATCAA-ATTCA-T-TCTT-TTTTCAACGCCACGATAACTA--CATCAA--TACTA-------TATTTGTAT--AACTAAGGTGATACACATTACACA-AA--CA-AAACATCTCATTGTAAAACGAGAGAAATTACGACCT------AACGATTGTGAATCCGATGTATCTGCCTGCAATCGCTACCGCC----TATATATACAAAC-TT---AACGTTTTTAGATGGAAATTTATACAATATA-AC-ATGTATGTGTACGCTTTGTATTATaaaacaaacattgcagtg
gi|6 : tttaatatacttaaacaatatatatactatattaaTAAATGCTATAT------A------CC------A--TTTTGTAATTAAAA-TACATATGCACCGTTACTT-TGAGACATACTCTTTAATGTAGAGAAATAGAAATTGACCATTTTTCAGATGTCAGATAATTTGTT------------TAA--CT-------ATCTTTGACTATATATGAATCAGATATGCAAATACACAGTTCAGCATGCATGCCCGCAGATGGGCGTGACA-ATCA-GACA-AATCATTTTAAATAACTT--------TTTCATTCCTTTGTCGA--------A--TGT--------C-T-TCA-TT-C---GCTTCATTTGTTAAAGT--ACGACGTTTTTCAGTCAACAAATCTCAGTAATGAA---------------------T-----------------------A--------------------TTAAACAATATTAACGGTTACA--------AGAG-----------CAAC---------------------ATCATGTAAA--TAGAGACAGATACACGCTGACATATGTTCACACAAAGACACAGATAATGCATGGTGAACATTATGTGGGACATCTGCAAGAGAAGCAAGACAGACAGGT----AGATAGACA------TA-GGGACATGTGCGGATTGGCAGCAAGGC-ATAAAACGCCGATAGACGCCACGATCGAGCTGCTAACA-ACA--CA------CCTAT------A------CAAACAG----AAAC-AAGTACTATGTATAACTGTTTCTTTG---TTTCAA-ATTGA-T-T--TTATTTCAACGCCACGATAACTA--TACCAA--TAATA-------TATGGATAT--AACTAAGGTTATACAGATTA-AAA-AA--CACACACATATCATTGATTAACGATCGAAATTACGACCG------AACGATTGAGGATCCGATG----TGCCTGCAATCGTTACTGCCTATATATATATATATAC-TT---AACGTTTTTAGATGGAAATTTATACAATGTATGCGAC-TGTGTGTACGACTTGTATTATgaaaacaaacattgcagtg
gi|7 : tttaatatgcttaatcaataTGAATGCTATAT------A------AATGTAGAA--TTTTGCAATCAATA-TATATGTGCACCGTA--TTATGAGACATACTCTTCAATGCAGAAAAATAGCCATTGATCATTATTCAGATGTCTGATCATTTGTT------------TAA--CT-------AT----------ATCTGAATCATATATGCAAATACACAGTCAAGCATGCATACCATTAGATGGGCGTGACA-ATCA--ACACAATAATTTTAAATAACTTAC-TG--CTTCCAATCTCTTTTCCA--------T--TGT--------C-T-T-T-TTTC---GCTTCATTTGTAGAAGG--CGTATGTTCTTCATCCGTCGGATCTGAGAAATAAA---------------------TTTAAAACACTATAAAAGGTT---A--------------------T--------------------A--------AGAG-----------CAAT---------------------ATCATGTAAAC-AAGAGATATCTACGCACCGGCATCTGTTCACACAAGGACACAGATAATGCATGGTTAACATTATGTGTGGCATCAGGGAGAAATACAAGACAGACAGGT----AGA----TATACGTGTA-TAGACATGTGCTGATAGACAGCCGGAC-ATGAAACGCCGTTAGACGTCACGAT--AGC----AACACACATTCA------C--CT------A------AA----G----AAACAAAGTATTATGTGAAAGTGTATATATT---TATCAA-ATTAATT-T--T-ATTTCAACGTCACGATAAATA--CGTCAG--TAATA-------TATGTATCT--AAGTAAGGTGATACAGATTAAACA-AA--CA-ACACATCTCATTGAAAAATGATCGAAATTACGACC---------TG--TGTGGATCCAATGTGTCTACCTGCAATCGCCACCGTC----TATATAGACAAAC-TT---AATGTTTTTAGATTAAAATTTATACAATATA-TCAATGTGTGTGTA-GCCTTTTAATATaaaacaaatattgcag
gi|8 : ctttaatatgctaaatatataATGCACCGTAACTG-TGAGATATACTCTAAAATGTAGGGAAATAGACATTGACCATTAGTCAGATGTCTGATAATTTGTTTAACTATTTGTTTAA--CT-------AT----------ATCTAAATCAGATATGGAAATACACAGTCAAGCATGCATGCCCGCA----------ACA-AT----ACACTATA--TTTTAATAAaaaggtattgcagt
gi|8 : ata---------------------T-----------------------A--------------------T--------------------A--------AGAG-----------AACC---------------------ATTATGCAGCA-TAGAGGCAGATACACACCGACATATGTATATACAAAAACACATATGATGCATGAAGAGCATGGTGTGGGGTATCAGGAAGAGTAACAAGACAAACAGGT----AGA----CT------TA-GAAACATGTGCAGATAAACTGCCAGAC-ATGAAACGCTGATAAACGCCGAGATCGAATCACTATCA-ACA--CACATATGC--AT------A------CA----G----AAAC-AAGTGCTTTGTATAACTGTAACTATT---TATCAA-ATTGA-T-T--TAATTTTAACGCCATGATAAGTA--CATCAA--TGTCA-------TATGTATAT--AAATAGGGTAATACAGATTGCACA-AA--CA-ACACAT---ATTGATTAACGATCGAAATTACGACCGATCAATAATTATTGTGGATCCGGTATGTCTATCTGCAAACGATACCGTC----TATGTTTACGTAC-TT---AAAGTTTGTAAATGGCCATTTAATCAATATA-ACAATGTGTGTGTACGCCATGTAATATaggaatcttgacaaatacatataaaacaatataatcggttataagagaaccattatgcagcatagaggcagatacacaccgacatatgtatatacaaaaacacatatgatgcatgaagagcatggtgtggggtatcaggaagagtaacaagacaaacaggtagacttagaaacatgtgcagataaactgccagacatgaaacgctgataaacgccgagatcgaatcactatcaacacacatatgcatacagaaacaagtgctttgtataactgtaactatttatcaaattgatttaattttaacgccatgataagtacatcaatgtcatatgtatataaatagggtaatacagattgcacaaacaacacatattgattaacgatcgaaattacgaccgatcaataattattgtggatccggtatgtctatctgcaaacgataccgtctatgtttacgtacttaaagtttgtaaatggccatttaatcaatataacaatgtgtgtgtacgccatgtaatatagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
gi|9 : ataatgcaccgtaactgtgagatatactctaaaatgtagggaaatagacattgaccattagtcagatgtctgataatttgtttaactatttgtttaactatatctaaatcagatatggaaatacacagtcaagcatgcatgcccgcaacaatacactatattttaataaaggaatcttgacaaatacatataaaacaatataatcggtTAAATGAAATAT------A------CA------A--TTTTGCAATTTAAA-TAAATATGCACCGTAAGTT-CGAGACATACTCTTAAATGCAGGGAAACATACATT-------ATTCAGATGTCAGATAATTTGTT------------TAA--CT-------AT----------ATTTGAATTAGATATGCAAATACACAGCCCAGCAAGCATGCCAGCAGATGGGGGTGACA--TCAAGACACAATAAGTTTGA-TGACTAAC-TG--TTTCCTTTCTGTTGCCGA--------AAATAT--------T-T-C-A--T-A---ACTTCATTTGCAAAAGC--CATACGTTCTTCATTCAACGAATCTGAGTAATAAA---------------------T-----------------------A--------------------TTAAACAGTATATACAGTT--ATT------AGAG-----------CAAC---------------------ATTATGCAAAC-TTGAGACACATACACACCGACATATCTACACACAAGGACATGGATAATGCAAAGAGGGCATTATATGGGGCATCAGGAAGAGATATAAGACAGACAGGT----AGA----CA------TA-TATACGTGTACTTGTATGCAACTAGGC-ATGGAACGCCGATA--------GATCGAGCCGCTAAAA-GTA--CA---------A-------A------CA----G----AAAC-AAATACTATGTATAGCTGCAACTGTTTAATATAAACATT---T-T--T-ATTTCAACGCCAAGATAACAA--CATCAT--TAATA-------TATGCATATAAAACTAAAGTGATAAAGATTAAACA-AA--CA-ACACATCTCATTGA-TAACGAACGAGATTACGACCG------AACAATTGTAGATCCGATGCGTCTGACTGCAAACACTAACGTC----TATATAAACATAC-TT---AATGTTTTTAGATGGAAATTTAAACAATATA-ACAATGTGTGTGTACGCCTTGTACTATagaaaaaattattgcagtgatattctccaatcactagttttgatgcgttctttattacggtaaacaatttcctgttggagtttgtatttttaaaaaaaaaactttctgcaatagtttct
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|25 ): NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCTTATTTTTGAAAATGACTTTCTGCAATAATTTCTTATGTAGTGCAGAAAGACATTTTTATCGCACTGTAAATCAACCGATATTTAATAGTTACCACTGAATCTTGCTAATAAATGGCTGTTTGAATGTGTTAAT
Unaligned ( gi|35 ): GAATACGAAGACATAGTAGACAATATTTCCAACCATAATGTATTTTGTTCGGATGGTTTGAGTTCTG
Unaligned ( gi|37 ): ACATGCACGTACACTGAACGTTTTATCAGACAATACTGTGGAAT