lowQualScore : 111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111 1111111111111111111 11111111111111 1111111111111111111111111111111111111111111111
lowQualScore : 22 1 6666666 222222 1 11 1 1 1 111111111111 1 1 44444444444 11111111111111111111111111111111111111111111111111111111111111111111111111111111111 333333 1 11 1 1 1 1 1 1 222222 1 1 2 3333333333333333333 11 2 22 1 1 1 1 111 66666 1111 55555555555555 1 1 3333333333333333333333333333333333333333333333 1 1 1 1 1 11 1 22 222222 1 1 1 4 1 2 22 33333 1 11111 9999999999999999999 111111 111111111 1111 11 222222222222 555555555555555555555555555555555 2222222222222
lowQualScore : 33 5 1 9999999 222222 6 8 5 6 44 3 4 2 6 7 5 6 7 333333333333 6 7 3 44444444444 6 33333333333333333333333333333333333333333333333333333333333333333333333333333333333 2 444444 5 44 6 0 5 2 7 5 7 7 0 88 6 3 11 222222 5 5 3 3 0 2 7777777777777777777 88 6 11 7 4 7 7 7 666 44444 9999 4 11111111111111 7 2 6 6 6666666666666666666666666666666666666666666666 0 0 3 7 7 4 0 3 3 0 7 99 0 44 3 444444 7 3 2 7 6 6 6 0 6 3 6 0 777 6 4 8 88 99999 3333 2 777 11111 66 0000000000000000000 222222 8888 777777777 2 55 7777 1 4 11 4 222222222222 777 5 4 888888888888888888888888888888888 3 3 7 3 2222222222222 4
lowQualScore : .. . . ....... ...... . . . . .. . . . . . . . . ............ . . . ........... . ................................................................................... . ...... . .. . . . . . . . . . .. . . .. ...... . . . . . . ................... .. . .. . . . . . ... ..... .... . .............. . . . . .............................................. . . . . . . . . . . . .. . .. . ...... . . . . . . . . . . . . ... . . . .. ..... .... . ... ..... .. ................... ...... .... ......... . .. .... . . .. . ............ ... . . ................................. . . . . ............. .
lowQualScore : 00 0 0 7777777 000000 0 3 0 7 00 3 0 7 0 0 0 0 3 000000000000 0 0 3 00000000000 7 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 5 555555 5 66 0 8 0 8 0 0 0 3 0 66 0 2 00 555555 0 0 2 0 2 8 5555555555555555555 33 7 00 0 0 0 0 0 777 00000 0000 0 55555555555555 0 2 0 2 5555555555555555555555555555555555555555555555 0 2 2 0 0 0 5 2 0 2 0 88 0 55 5 000000 0 2 5 0 0 0 0 0 0 3 0 0 888 0 4 9 33 00000 4444 2 888 11111 11 1111111111111111111 888888 7777 888888888 0 77 4444 9 9 88 4 888888888888 000 3 4 666666666666666666666666666666666 6 3 4 6 0000000000000 0
consensus : AGTTGGCACATGGAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATAACC-ATCTCCAAGTGCCATTATCTGATACTATGTAGATATATTTT-AGAAAA-TATTTACATNAAACAAATNAGGTCACGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-G---A-ACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATCGACT-CCT-TACACTGATTTTGACCAAGGAACTATAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNAACNNTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAGGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAAACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTA-G----A--ATT--AA-A-AAAACGCT-ATAAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTCACTCGACGCGGTANTGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACG---T---CCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTNAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGAGTTGAATTTCAGCTTTCAGATTCTATCGAT---AAAGAAA-T-AAA-GCAATACTCT---TATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA-T--------A--AT----ATT------TATCTATTTC--TTTATA---------TATTTATAATTTACTTTCGCTGATTACACNTAAGTTGCCATTTCATTAAAAATA-AA-AAA------------AATGTATA---CATTCTCGCTGA-AAT--------TA---------------------ATTAAACA-AGTT-CTATTTACTGTTTTATTT-ATTTTAAAT-------------TT-CATAAAGTAAAACAATAAAGC
Reference ( gi|1 ) : AGTTGGCACATGAAATTGAAATTTATGTTGAAGCATCGAATCAATCCGGCGTTACTGTTATGAATACATTAAC-ATCTCCAAGTGCCATTATCCGAAAGTATGTAGATCTATTTC-AGAAAA-TATTTACATAAAACAAATAAAGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCATTTTTTAATTATACTAGAGGACTT-AT---------ACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGTATCATTAATAATTTT-CTCATTGTCATTAACTTCTTTTACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAATATAGCGGTCCCATGTATTGACCCTGAAATTGAGTCTATCACTGTCTTTTATTTAACAAAAGTATCAGTTCAAACTTGAAATGAAATTGATAATACGTTAAATAGAAACTTATACTGTGACAAAGTATCAATTCCAATGACAAACCAGAGATGCATTGACAATAAATTAACTGGATAAATATTTCCCAACATGATAAAAACAATAATTCAAATTA-T-------AT--------AAAACGCT-TTAAAAA-TTACAGTAATTAAAAGAACAGACCTTAAGCATTTATTGTATTAACTACTGGACAAGCAGTGACTAACATGTACTTAT-C-CCCCACACCCACCTTCAATCCTCGTAGAAATGTGTGCAATATGTACAATAGCGCTTATCACTCCTGGGTTTATGACAGGATGTATGCAACACTACATCATAATTATTATCACACG---G---CC-------------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTAAAATTAACATTAAACATTCAATTAAACGGCCTGCAAACCGATAAATTTTAATGTCCTATGTGCATTTTGTAGAAATATG-TAAAAA-GAATTAAGTGATCA-TATTTATCAAAATTAATATTCACAAGATACGGGAATACAAAAAACCTAGTTTATGAATAGATTTGTTGTAAGCTAC-ATTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCTATTGAGT-GAATTTCAGCTTTCAGATTCTATTGAT---AGAGAAA-T-AA--GCAATACTCTGATTATCAGTGTTCTCTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA-T--------A--A-----ATT------TATCTATTCC--TTTATA---------TATTTATAATTTACTTTCGCTGATTACACTTGAGTTGCCATTTCATTAAAAATA-AA-AAA------------AATGTATA---CATTCTCACTGA-AAT--------TA---------------------ATTAAACA-AGTT-CTATTAACTGTTTTATTT-ATTTTAAAT-------------TT-CATAAAGTAAAACAATAAAGC
gi|2 : AGTTGGCACATGGAATTGAGTTTTATGTTTAAACATCGAATCAATC----GTTATTTTTATGAATACA-AAACAATCTCCAAGTGTCATTATATGAAACTATGTAGATCTATTTC-AGAAAA-TATTTACATCAAATAAATCAGGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCCTTTTTTATTAATATTAGAGGACTTAATTTGACCAA-ACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTGATTTCCTTTACACTGATTTTGACAAAGGAACTTTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA-AAAGATAAAGGTCCCATGTATTGACCTTGAAATTTAGTCTATCTTTATCTTTTATTTAAGAAAAGTATCAGTTAAATCTAGAAATAAAATTGATAATAAGTAAAATAGAAACTTATTCTATGAAAAAGTAACAATTTCAATGACAAACCAGAGATACAGTAACAATAAATTAACTGGATAAATAGTTACCAAC--------AACAATTATTCAAATAA-G-------ATTTTAACAAAAAACGCTATAAAAAA-ATACAGTAATTAGCAGAACAGACCTTAAGCAATTATTATATTAACTAAATGACAAGCAGTGACCAATTTGTACTAAT-C-C
gi|12 : tcAGTTGGCACATGAAATTGAGTTTTATATTCAAGCATAGGATCA----GCCGTTACTGTTATGAATACATCACC-ATCTCCACGTGCCATTATCTGATACTATGTAGATATATTTTTAGAAAAATATTTACATGAAACAAATGAGGTCACGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTGAATTATAagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|23 : atcAGTTGGCTCATGGAATTGAGTTTTATGTTCAAGCGTtaagcgaaaaaacaactaaaaatac
gi|6 : gatcTCGGCACATGAGATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATAACC-ATCTCCAAGTGCCATTATCTGATACTATGTAGATATAATTT-AGAAAA-TATTTACATAAAACAAATTAGGTCATGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTTAATTATATTAG--------------------CGAAAAAACCGCGTAAATATAATCAGTTATGCCTATATTATGTATATCTGCATTTTTAATAATTTTGCTCATGGGCCTCAACTATCTATACACTGATTTTGACCAAGAAACTATAGT-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAAAATCGAAGTCCC-TGTTTTAACCCTGAAATTTTGTCTATCACTATCTTTTATt
gi|3 : atcatAGATAAAACGTCCTTTCTTAATTATATTTGAGGACTT-ATTTTGAACAAACGAAACACTCACGTAAATACAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTATTAATTTT-CTCATTGTCA--------------A-TGATTTTGACCAAGGAACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT-AAC----ACAAATC--GAGGTCCGATGTATTGACCCTGAAACTTAGTCTATCACTAGCTTTTATCTAAGAAAAGTATCAGTTAAAATTAGAAATGAAATTAATCATAAGTAAAATAGAAACTAATACTAAGTCAAAGTATCAATTTCAATGACAAACCAGAGATACATTAACAATAAATTAACTAGATAAATAGTTACCAACATGATACAAAAAAT-ATTCAAACTAGTTTTTAAAAC--------AAAACGCT-ATAAACATTTACAGTAATTAGCAGAGCAGACCTTAAGCAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACT
gi|19 : TAACAAAAATCTAGGTCCC-TGTATCGACTATAAAATTTTGTCTATCACAACCTTTTATTTAGGAAAAGTATCAATTTAAaactccatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|15 : ATTTAACCTGACATCAAGTCTGTCATTATCT---ATTTAGGAAAAGTATCAGTTATTACCAGAAATGAAAATGACAATTAGTAAAATAG------ATAC--TGACAAAATATCTATTTCAAT-ACAA
gi|4 : aaacacaagacatccaCTAATACTATGACAAAGTATCAAGTTCAATGACAA----------C-----CAATAAATTAACTGGATAAATAGTTACCAATATGATAAAAATAATTATTCAAATTA-G-------ATTAAAAAA-AAAAAGCT-ATAAAAAATTACAATAATTAGCAAAACAGACCTTAAGTAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAATTC-CCCCACACCCACCTTCA-----CGCGGTATTGTGTGCAATATGTA-----------A--ACTCCAGGGTTTATGATAGGATGTATGCAACATTAAATCATTATTGTTATCAAACG---T---CCTCT----------AATTA--------TCGATAATTAGAAGTTATT-CAGTGAGTCAATGACAGCGGTTTTAAAATAACATTGAACATTCAATTAAGCGGTCTGCAAACCGATGAATTGTAATGTCCTTTGTGCATTATGTAGATATATG-TAAAAA-AAAATAAGTCAATA-TTTTTATCAAAGTTAATATTCATTAGATACTGGAATACAAAAATCCTAGTTTATGAAAAGATTTTTTATAAACTACAACTTAGGATATTGTACGATTG-Ttattagtcatcaacaacattatatcacaaactaaagacatataacaaattaagtaag
gi|16 : ATACTATGACAATGTATCAATTTCAATGACAAACCAGAAGTAAATAAACAAAAAAATAACTGGATACATAGTTACTAACATGATAAAAACAATTATTTAAATTA-GAAGAA--AA--------AAAACGCT-tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctttcagattctattgatgaagaaataaagcaatactctgattatcagtgttctgtcatttgttttgtttttcatatattccctattaattaatatttatcaatttttgtttatatatttataattaactttcgctgattactcttaagttgccatttcataaaatatataaaaatgtatacattcttgctgaaattaataaacaggttctatttactgttttatttatttaaaatttcatcaactaaaacaataaagcgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : aTAACTACAGGACACGCAGTGACTGACTTGTACTAAT-CTCCCCACACCCACCTTCACTCGACGCGGTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCAATATTATTATCACATGTTCT---CT-------------AATTA--------T----------TGATAATCATAAGTTTTC-ATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGACCTGCATACCGATA------AATGTACTATGTGCTTTATGTAGATATATC-TAAAAA------AAGTGAATA-TTTTTATCAAAATTAATATTCACTAG--------ATACAAAAATCCTAGATTACGAAGAAATTTGATATAAACTGCAACTTAGAAAACTGTATGATTGTTGACAat
gi|3 : ACTCCATGGTTTATGGCAGGATGTATACAACATTACATCATAATTATTATCACACG---T---CCTCTGATTATCGATAATTA--------T----------AAGTTATT-TAGGGAGACAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGGCCTGCATACCGATAAATTTTAATGTTCTATGTGCATTATGTAG------G-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATTAAGTGACTTGTTATAAACTACAACTTAGGATATTGTACGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgaaggaattttagctttcagattctattgataaagaaataaagcaatactctatccgtgttctatcatttgtttttttgtttttttttatatatattccctattaattaatagttatctattaatttatatatttataatttactttcgccatttcattaaaaataaaaaaatgtatacattctcgctgaaattaataaacaaatcccattaacagttttatttattttataaagtaaaataataaagtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|2 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaTCCAGGGTTTATGGCAGGATGTATGCAACATTACATAAT--TTATTACCACACG---TACTCT-------------AATTAACGATAATT----------AAGTTATT-TATGGAGTCAACGACAGCAGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTTCATTATGTAGATATATGTTAAAAATAAATTAAATGAACATTTTTTATCAAAATTGATATTCACTAGATACGGGAATGCAAAAATCCTAGTTTATGAGAAGATTTGTTATAAAATACAACTTACGATATTGTACGATTG-Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|2 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaatttgtactaaTATCTATTGAGT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA--GCAATACTC----CATCAGTGTTCTATCATTTGTTAT---GTTTTTC------CC--TATTAACTA----------A--A-----ATT------TATCTATTTA--TTTATA---------TATTTATAATTTACTTTC--------------------------ATTAAAAATA-AA-AAA------------AATGTATA---CATTCTCtcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|3 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaatttgtactaatccagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATCTATTGAGT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-T-AAA-GCAATAC----ACTATCCGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCTTA-TTT------ATTATT---ATT------TATCTATTTC--TTTATA---------TATTTATAATTTACTTTCGCTGATTACACATAAGTTGCCATTTTATTAAAAGT--AA-AAC------------TTTGTAAA---CATTCTCGCTGA-AAT--------TA---------------------A-TAAACA-AGTT-CTATTTACCGTTTTATTT-ATTTTGAAT-------------TT-CATAAAGTAAAA-AATAAg
gi|5 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaactccatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATCTATTGAAG-GAATTTTAGCTTTCAGATTCTATTGAT---AAAGAAA-T-AAA-GCAATACTCT----ATCCGTGTTCTATCATTTGTTTTTTTGTTTTTTTTTATATA--TATTCCCTA-T--------T--A-----ATTAATAGTTATCTATTAA--TTTATA---------TATTTATAATTTACTTTCGC------------------CATTTCATTAAAAATA-AA-A-A------------AATGTATA---CATTCTCGCTGA-AAT--------TA---------------------A-TAAACA-AATC-CCATTAACAGTTTTATTT-ATTTT---------------------ATAAAGTAAAATAATAAAG
gi|9 : taactacaggacacgcagtgactgacttgtactaatctccccacacccaccttcactcgacgcggtaatgtgtgcaatatgtaaatatatcactccagggtttatggcaggatgtatgcaacattacatcaatattattatcacatgttctctaattattgataatcataagttttcatgacagcggttttaaaataacattaaacattcaatttaacgacctgcataccgataaatgtactatgtgctttatgtagatatatctaaaaaaagtgaatatttttatcaaaattaatattcactagatacaaaaatcctagattacgaagaaatttgatataaactgcaacttagaaaactgtatgattgttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATCTATTGAGTTAAATTTCAGTTTTTAGATTCTATTGATTAAAAAAAAA-TAAA--GCAATACTC----TATCA-------------TGTTTT---GTTTTTC-----ATA--TATTCCCTATT--------A--ATAAATATT------TATCTATTTC--TTTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATCTCATTAAAAAT--AA-AAA------------AGTGTATA---CATTATCGCTGA-AAT--------TA---------------------A-CAAACA-AGTT-CTATTGGCTGTTTTATTTAATTTTAACT-------------TT-CATAAAGTAAAACAATAAAGCtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|8 : ATCTATTGAGTTAAATTTCAGCTTTTAGATTTTATTGAT---AAAAAAAAT-AAA-GCAATACTCT----ATCAGTGTTCTATCAT--GTTTT---GTTTTTC-----ATA--TATTCCCTA-TTAATA---A--AT----ATT------TATCTATTTC--TTTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAATTGCCATCTCATT-AAAATA-AG-AAA------------AGTGTATA---CATTATTGCTGA-AAT--------TA---------------------A-CAAACA-AGTT-CTATTTACTGTTTTATTT-ATTTTAAAT-------------TT-CATAAAGTAAAACAATAAAGCgaaacaaaatatcggaaactgtcaatatgtcaggaaagtctcggcgagt
gi|10 : ATTGAGTTAAATTTCAGCTTTCCGATTCCCACAAT---AAAACCA-T-AAA-GCAATACTCTGGTCAT-----TTCTATCATTTGTTTG---ATTTTTC-----ATAACTATATGCTA-TCTTAATTAA--A-----ATT------CAACTATTTC--TTT-TACTTCGCTGTTATTTGT-ATTTACTT-------TTACACAT--GTTACTGTTCTA-TAAAAATA-AATGAATGAATTTGTCCTAATGTTTA---TATTAT--CTAATAAT--------TATATATACTTTATCATAGTATTATTAAATATACTC-CTATTAACTGTTTCATTT-ATTTTAAAgaaacaaaataccggaaactgtcaatatgtcaggaaagtctcggcgagt
gi|11 : atcaATTTCAGCTTTCAGATTATATAGAT---AAATAAT-A-AA--GCAGTACTCT----AGCGGGTTTCTCTCATTTGTTTG---GTTGATA-----ATA--TTTTCTTTA-TTATA----A--ATTATTATT------TATCTATTTC--ATTACA---------TATTGAGTATTTATTTGCGCTTATTACACATACGTTTCCGTTTAATCTGAAAT--AA-AAG------------TATGTATA---CCCTCTCGCTAA-AATAAACAAACTA---------------------ATCAAA-A-AATT-AGATCAAATG---TATTT-A---CAA---------------TT-CATA
gi|4 : gtaatGCTTTCAGATTCTATTGAT---GAAGAAA-T-AAA-GCAATACTCTGATTATCAGTGTTCTGTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTATT--------A--ATTAATATT------TATCAATTTTTGTTTATA---------TATTTATAATTAACTTTCGCTGATTACTCTTAAGTTGCCATTTCAT--AAAATATAT-AAA------------AATGTATA---CATTCTTGCTGA-AAT--------TA---------------------A-TAAACA-GGTT-CTATTTACTGTTTTATTT-ATTTAAAAT-------------TT-CATCAACTAAAACAATAAAGCggcatttttaagtcgaatatatatgttgt
gi|7 : ctaatactatgacaaagtatcaagttcaatgacaaccaataaattaactggataaatagttaccaatatgataaaaataattattcaaattagattaaaaaaaaaaagctataaaaaattacaataattagcaaaacagaccttaagtaattattgtataaactacaggacaagcagtgactaacttgtactaattcccccacacccaccttcacgcggtattgtgtgcaatatgtaaactccagggtttatgataggatgtatgcaacattaaatcattattgttatcaaacgtcctctaattatcgataattagaagttattcagtgagtcaatgacagcggttttaaaataacattgaacattcaattaagcggtctgcaaaccgatgaattgtaatgtcctttgtgcattatgtagatatatgtaaaaaaaaataagtcaatatttttatcaaagttaatattcattagatactggaatacaaaaatcctagtttatgaaaagattttttataaactacaacttaggatattgtacgattgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTCAAATTATCTCGAA---AAAAATA-T-AAAAGCCATACTCTAGCT----GCTTTCCATCATTTGTTTT---GTTTTTC-----ATA--TATCTTTTG-C--------A----------T------TATAGA--CC--T----A---------TATTTATCATTTACTTTTGCTTATTACACTTACGTTACAATTTCATCTAATGTA-AA-AAA------------TCTGTATA---CCTTCTCGCTGA-AA---------------------------------TTAAACA-AGTT-CGATCAAATGgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|13 : TGTATATTTCATATTTATTGT-A-T--------TA----------------------TTCTACA-TATTACTATTTATTGTTTTACTT-ATTTTAAATAGCGCTTACGAATTT-CCTAAAGTAATACAATAAAGCgatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatattcctatttactgttttatgtatttaaatcgctgacgaatttcataaagtaaaacaaaaatatcggagactgtagatatgttacaaaagtattggcaa
gi|17 : aaaaaagttcgatcactgatgaaatgattatcgtaatgtgtatcttattttatgatTAAAAA-AGTT-CTATTTACTGTTTTATTT-ACTTTAAAT-------------CG-CATAAAGTAAAACAATAAAGCgaaacaatataacggatagtgtcgatatgtttctaatgtttaggcgag
gi|18 : ttgaTAAACA-AGTT-CTATTTACTGTTTCATTT-ATTTTGAAT-------------TTCCAT-AAGTAAAACAATAAAGgaaacaaaataccgtaaactgtcgatatgttatgaaagactcggcgagta
gi|14 : TC-CTATTTACTGTTTTATTT-ATTTTAAAT-------------TT-TGTAAAGTAAAACAA-AAAagaaacaaaaccctggaaactgtcgatatgttacgaaagtctcggcgagta
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|20 ): ATATTCCTATTAATTGTTTTACTTTAAATTGTGCTGACGATTTTCATATAAGTAAAATAATACAGTGAAA
Unaligned ( gi|21 ): AAGGATTAGCTATGATCTCTCTAATTCCTTGTTTTAAATAGTACTGACAAATTTCATAAAGAAAAACAA
Unaligned ( gi|22 ): AAATATTAAAGCAAGACAAAACTACCGGAGACTGCCGATATAATACGAAAGACTCGACGAGTA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 1 1 7777777777777777 1 555555555555555 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 4444444444444 111 2 2222 1 2222222 3333333333 5555555555555555555 11 1 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 33333333 1111111111 66666666 11111 111111111 222222222222 44444444444444444444444 2222222222222222222222222
lowQualScore : 1111 3 4 3 0 0 1 1 2 3 2222222222222222 2 0 222222222222222 2 77777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1 3 3 6 66666 1 0 0 0 4444444444444 444 8 0 1 999 0000 1 3 9999999 11 22 0 5555555555 5555555555555555555 8 0 1 1 0 0 11 8 11 1 8 0 1 0 0 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 33 3 777 4 4 44444444 2 2 0 777 4444444444 777 11111111 11111 55 666666666 0 0 33 3 55 0 99 4 000000000000 4 88888888888888888888888 3 3 2222222222222222222222222 3
lowQualScore : .... . . . . . . . . . ................ . . ............... . ................................................................................... . . . . . ..... . . . . ............. ... . . . ... .... . . ....... .. .. . .......... ................... . . . . . . .. . .. . . . . . . ................................................................................................................................ . .. . ... . . ........ . . . ... .......... ... ........ ..... .. ......... . . .. . .. . .. . ............ . ....................... . . ......................... .
lowQualScore : 2222 5 0 0 0 0 0 0 5 2 0000000000000000 0 0 000000000000000 5 22222222222222222222222222222222222222222222222222222222222222222222222222222222222 6 0 2 7 7 33333 8 8 6 8 4444444444444 000 0 0 0 222 0000 0 3 0000000 00 22 8 0000000000 0000000000000000000 0 8 0 4 8 6 88 0 88 0 0 8 4 8 0 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 44 7 000 0 0 22222222 3 5 8 000 4444444444 000 44444444 99999 55 000000000 9 7 22 8 22 7 77 0 555555555555 4 66666666666666666666666 6 3 8888888888888888888888888 6
consensus : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT--TCT-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAG-A-NTTA--AA--AAAAC---GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTCACTC--CGCGGTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC---T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----A----TATATTC---CCTA--TTAAT-AAT----ATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATA-AA-AAA------------AATGTATACATTCTCGCTGA-AATTA---------------------A-TAAACA-AGTTCTATTTACTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
Reference ( family-648 ) : AGTTGGCACATGGAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATAACCATCTCCAAGTGCCATTATCTGATACTATGTAGATATA-TTTTAG-AAAATATTTACATNAAACAAATNAGGTCACGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATCGACT--CCT-T--ACACTGATTTTGACCAAGGAACTATAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNAACNNTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAGGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAG-A-ATTA--AA--AAAAC---GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTCACTCGACGCGGTANTGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTNAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATCGAT---AAAGAAA-TAAA-GCAATACTC---T---TATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----A----TATATTC---CCTA--T-----AAT----ATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACNTAAGTTGCCATTTCATTAAAAATA-AA-AAA------------AATGTATACATTCTCGCTGA-AATTA---------------------ATTAAACA-AGTTCTATTTACTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|1 : AGTTGGCACATGAAATTGAAATTTATGTTGAAGCATCGAATCAATCCGGCGTTACTGTTATGAATACATTAACATCTCCAAGTGCCATTATCCGAAAGTATGTAGATCTA-TTTCAG-AAAATATTTACATAAAACAAATAAAGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCATTTTTTAATTATACTAGAGGACTT-AT-------------ACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGTATCATTAATAATTTT-CTCATTGTCATTAACT--TCT-TTTACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAATATAGCGGTCCCATGTATTGACCCTGAAATTGAGTCTATCACTGTCTTTTATTTAACAAAAGTATCAGTTCAAACTTGAAATGAAATTGATAATACGTTAAATAGAAACTTATACTGTGACAAAGTATCAATTCCAATGACAA-ACCAGAGATGCATTGACAATAAATTAACTGGATAAATATTTCCCAACATGATAAAAACAATAATTCAAATTAT---AT--------AAAAC---GCTTT-AAAAA-TTACAGTAATTAAAAGAACAGACCTTAAGCATTTATTGTATTAACTACTGGACAAGCAGTGACTAACATGTACTTAT-C-CCCCACACCCACCTTCAATCCTCGTAGAAATGTGTGCAATATGTACAATAGCGCTTATCACTCCTGGGTTTATGACAGGATGTATGCAACACTACATCATAATTATTATCACACGGCC-------------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTAAAATTAACATTAAACATTCAATTAAACGGCCTGCAAACCGATAAATTTTAATGTCCTATGTGCATTTTGTAGAAATATG-TAAAAA-GAATTAAGTGATCA-TATTTATCAAAATTAATATTCACAAGATACGGGAATACAAAAAACCTAGTTTATGAATAGATTTGTTGTAAGCTAC-ATTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCTATTGA-G-TGAATTTCAGCTTTCAGATTCTATTGAT---AGAGAAA-T-AA-GCAATACTCTGAT---TATCAGTGTTCTCTCATTTGTTTT---GTTTTTC-----A----TATATTC---CCTA--T-----AA-----ATTTATCTATTCCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTGAGTTGCCATTTCATTAAAAATA-AA-AAA------------AATGTATACATTCTCACTGA-AATTA---------------------ATTAAACA-AGTTCTATTAACTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|10 : ATCAATTGA-GTTAAATTTCAGCTTTCCGATTCCCACAAT---AAAACCA-TAAA-GCAATACTC---T---GGTCA-T-TTCTATCATTTGTTTG---ATTTTTC-----ATAACTATATGCTATCTTAATT-----AAA----ATTCAACTATTTCT--TT-TACTTCGCTGTTATTTGT-ATTTACTT-------TTACACAT--GTTACTGTTCTA-TAAAAATA-AATGAATGAATTTGTCCTAATGTTTATATTAT--CTAATAATTATATATACTTTATCATAGTATTATTAAATATACTCCTATTAACTGTTTCATTT-ATTTTAA----------A
gi|11 : ATTTCAGCTTTCAGATTATATAGAT---AAATAA--TAAA-GCAGTACTC---T----AGCGGGTTTCTCTCATTTGTTTG---GTTGATA-----A----TATTTTC---TTTA--TTATA-AATTATTATTTATCTATTTCA--TTACA---------TATTGAGTATTTATTTGCGCTTATTACACATACGTTTCCGTTTAATCTGAAAT--AA-AAG------------TATGTATACCCTCTCGCTAA-AA--------------------------TAAACA-A
gi|12 : gtaatAGTTGGCACATGAAATTGAGTTTTATATTCAAGCATAGGATCAGCC----GTTACTGTTATGAATACATCACCATCTCCACGTGCCATTATCTGATACTATGTAGATATATTTTTAGAAAAATATTTACATGAAACAAATGAGGTCACGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTGAATTATATAAGactaatcaaaaaattagatcaaatgtatttacaattcataggcatttttaagtcgaatatatatgttgt
gi|13 : atcCTATTTATTGTTTTACTT-ATTTTAA----------ATAGCGCTTACGAATTT-CCTAAAGTAATACAATAAAGCcgaaaaaacaactaaaaatac
gi|14 : aaaaaagttcgatcactgatgaaatgattatcgtaatgtgtatcttattttatgattgtatatttcatatttattgtattattctacatattaTCCTATTTACTGTTTTATTT-ATTTTAA----------AT-------------TT-TGTAAAGTAAAACAA-AAAgaaacaatataacggatagtgtcgatatgtttctaatgtttaggcgag
gi|15 : cgatcacatctatatagctattacatcacatttcaataatgcacaaactgtgtttaaaagtatcgggttaaaaaataaacttctttattcatagtattattctacatatATTTAACCTGACATCAAGTCTGTCATTATCT---ATTTAGGAAAAGTATCAGTTATTACCAGAAATGAAAATGACAATTAGTAAAATAG------ATAC--TGACAAAATATCTATTTCAAT-ACAATATTAG---T-CATCAACAACAtaccggagactgttgatatgttacgaaagtatcggcgagt
gi|16 : aaacacaagacatccaAATACTATGACAATGTATCAATTTCAATGACAA-ACCAGAAGTAAATAAACAAAAAAATAACTGGATACATAGTTACTAACATGATAAAAACAATTATTTAAATTAG-A-AGAA--AA--AAAAC---GCTAT-ttatatcacaaactaaagacatataacaaattaagtaag
gi|17 : TAAAAA-AGTTCTATTTACTGTTTTATTT-ACTTTAA----------AT-------------CG-CATAAAGTAAAACAATAAAGC
gi|18 : ttgaTAAACA-AGTTCTATTTACTGTTTCATTT-ATTTTGA----------AT-------------TTCCAT-AAGTAAAACAATAAAGgaaacaaaataccgtaaactgtcgatatgttatgaaagactcggcgagta
gi|19 : TAACAAAAATCTAGGTCCC-TGTATCGACTATAAAATTTTGTCTATCACAACCTTTTATTTAGGAAAAGTATCAATTTAAagaaacaaaaccctggaaactgtcgatatgttacgaaagtctcggcgagta
gi|2 : AGTTGGCACATGGAATTGAGTTTTATGTTTAAACATCGAATCAATC----GTTATTTTTATGAATACAAAACAATCTCCAAGTGTCATTATATGAAACTATGTAGATCTA-TTTCAG-AAAATATTTACATCAAATAAATCAGGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCCTTTTTTATTAATATTAGAGGACTTAATTT-----GACCAAACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTGATTTCCTT-T--ACACTGATTTTGACAAAGGAACTTTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA-AAAGATAAAGGTCCCATGTATTGACCTTGAAATTTAGTCTATCTTTATCTTTTATTTAAGAAAAGTATCAGTTAAATCTAGAAATAAAATTGATAATAAGTAAAATAGAAACTTATTCTATGAAAAAGTAACAATTTCAATGACAA-ACCAGAGATACAGTAACAATAAATTAACTGGATAAATAGTTACCAAC--------AACAATTATTCAAATAAG-ATTTTAACAA--AAAAC---GCTATAAAAAA-ATACAGTAATTAGCAGAACAGACCTTAAGCAATTATTATATTAACTAAATGACAAGCAGTGACCAATTTGTACTAAT-C-C
gi|2 : tcTG-----TACTAATCCAGGGTTTATGGCAGGATGTATGCAACATTACATAATT--TATTACCACACGTACTCT----------AATTAACGATAATT----------AAGTTATT-TATGGAGTCAACGACAGCAGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTTCATTATGTAGATATATGTTAAAAATAAATTAAATGAACATTTTTTATCAAAATTGATATTCACTAGATACGGGAATGCAAAAATCCTAGTTTATGAGAAGATTTGTTATAAAATACAACTTACGATATTGTACGATTG-Tagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|2 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaattTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC-------CATCAGTGTTCTATCATTTGTTAT---GTTTTTC----------CCTATTA---ACTA--------AA-----ATTTATCTATTTAT--TTATA---------TATTTATAATTTAC--------------------------TTTCATTAAAAATA-AA-AAA------------AATGTATACATTCTCGtcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|23 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaatttgtactaatccagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGTTGGCTCATGGAATTGAGTTTTATGTTCAAGCGT
gi|3 : gatcAGATAAAACGTCCTTTCTTAATTATATTTGAGGACTT-ATTTTGAACA----AACGAAACACTCACGTAAATACAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTATTAATTTT-CTCATTGTCA-----------------A-TGATTTTGACCAAGGAACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT-------AACACAAATCGAGGTCCGATGTATTGACCCTGAAACTTAGTCTATCACTAGCTTTTATCTAAGAAAAGTATCAGTTAAAATTAGAAATGAAATTAATCATAAGTAAAATAGAAACTAATACTAAGTCAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTAGATAAATAGTTACCAACATGATACAAAAAA-TATTCAAACTAGTT-TTTA--AAACAAAAC---GCTAT-AAACATTTACAGTAATTAGCAGAGCAGACCTTAAGCAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAAC-T-CCt
gi|3 : ACTCCATGGTTTATGGCAGGATGTATACAACATTACATCATAATTATTATCACACGTCCTCTGATTATCGATAATTA--------T----------AAGTTATT-TAGGGAGACAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGGCCTGCATACCGATAAATTTTAATGTTCTATGTGCATTATGTAG------G-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATTAAGTGACTTGTTATAAACTACAACTTAGGATATTGTACGATTatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|3 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACAC---T----ATCCGTGTTCTATCATTTGTTTT---GTTTTTC-----A----TATATTC---CTTA--TTTATTATT----ATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACATAAGTTGCCATTTTATTAAAAGT--AA-AAC------------TTTGTAAACATTCTCGCTGA-AATTA---------------------A-TAAACA-AGTTCTATTTACCGTTTTATTT-ATTTTGA----------AT-------------TT-CATAAAGTAAAA-AATAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|4 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaactccatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTAATACTATGACAAAGTATCAAGTTCAATGACAA-----------C-----CAATAAATTAACTGGATAAATAGTTACCAATATGATAAAAATAATTATTCAAATTAG-A--TTA--AA--AAAAAAAAGCTAT-AAAAAATTACAATAATTAGCAAAACAGACCTTAAGTAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAATTC-CCCCACACCCACCTTCAC-----GCGGTATTGTGTGCAATATGTA-AA------------CTCCAGGGTTTATGATAGGATGTATGCAACATTAAATCATTATTGTTATCAAACGTCCTCT----------AATTA--------TCGATAATTAGAAGTTATT-CAGTGAGTCAATGACAGCGGTTTTAAAATAACATTGAACATTCAATTAAGCGGTCTGCAAACCGATGAATTGTAATGTCCTTTGTGCATTATGTAGATATATG-TAAAAA-AAAATAAGTCAATA-TTTTTATCAAAGTTAATATTCATTAGATACTGGAATACAAAAATCCTAGTTTATGAAAAGATTTTTTATAAACTACAACTTAGGATATTGTACGATTG-T
gi|4 : GCTTTCAGATTCTATTGAT---GAAGAAA-TAAA-GCAATACTC---TGATTATCAGTGTTCTGTCATTTGTTTT---GTTTTTC-----A----TATATTC---CCTA--TTAATTAAT----ATTTATCAATTTTTGTTTATA---------TATTTATAATTAACTTTCGCTGATTACTCTTAAGTTGCCATTTCAT--AAAATATAT-AAA------------AATGTATACATTCTTGCTGA-AATTA---------------------A-TAAACA-GGTTCTATTTACTGTTTTATTT-ATTTAAA----------AT-------------TT-CATCAACTAAAACAATAAAGCtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctttcagattctattgatgaagaaataaagcaatactctgattatcagtgttctgtcatttgttttgtttttcatatattccctattaattaatatttatcaatttttgtttatatatttataattaactttcgctgattactcttaagttgccatttcataaaatatataaaaatgtatacattcttgctgaaattaataaacaggttctatttactgttttatttatttaaaatttcatcaactaaaacaataaagcgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : ctaatactatgacaaagtatcaagttcaatgacaaccaataaattaactggataaatagttaccaatatgataaaaataattattcaaattagattaaaaaaaaaaagctataaaaaattacaataattagcaaaacagaccttaagtaattattgtataaactacaggacaagcagtgactaacttgtactaattcccccacacccaccttcacgcggtattgtgtgcaatatgtaaactccagggtttatgataggatgtatgcaacattaaatcattattgttatcaaacgtcctctaattatcgataattagaagttattcagtgagtcaatgacagcggttttaaaataacattgaacattcaattaagcggtctgcaaaccgatgaattgtaatgtcctttgtgcattatgtagatatatgtaaaaaaaaataagtcaatatttttatcaaagttaatattcattagatactggaatacaaaaatcctagtttatgaaaagattttttataaactacaacttaggatattgtacgattgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACTACAGGACACGCAGTGACTGACTTGTACTAAT-CTCCCCACACCCACCTTCACTCGACGCGGTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCAATATTATTATCACATGTTCTCT----------AATTA--------T----------TGATAATCATAAGTTTTC-ATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGACCTGCATACCGATA------AATGTACTATGTGCTTTATGTAGATATATC-TAAAAA------AAGTGAATA-TTTTTATCAAAATTAATATTCACTAG--------ATACAAAAATCCTAGATTACGAAGAAATTTGATATAAACTGCAACTTAGAAAACTGTATGATTGTTGACAgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : tTATCTATTGAAG--GAATTTTAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC---T----ATCCGTGTTCTATCATTTGTTTTTTTGTTTTTTTTTATA----TATATTC---CCTA--TTAATTAAT----AGTTATCTATTAAT--TTATA---------TATTTATAATTTACTTTCGC------------------CATTTCATTAAAAATA-AA-A-A------------AATGTATACATTCTCGCTGA-AATTA---------------------A-TAAACA-AATCCCATTAACAGTTTTATTT-ATTTT-------------------------------ATAAAGTAAAATAATAAAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgaaggaattttagctttcagattctattgataaagaaataaagcaatactctatccgtgttctatcatttgtttttttgtttttttttatatatattccctattaattaatagttatctattaatttatatatttataatttactttcgccatttcattaaaaataaaaaaatgtatacattctcgctgaaattaataaacaaatcccattaacagttttatttattttataaagtaaaataataaagtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|6 : taactacaggacacgcagtgactgacttgtactaatctccccacacccaccttcactcgacgcggtaatgtgtgcaatatgtaaatatatcactccagggtttatggcaggatgtatgcaacattacatcaatattattatcacatgttctctaattattgataatcataagttttcatgacagcggttttaaaataacattaaacattcaatttaacgacctgcataccgataaatgtactatgtgctttatgtagatatatctaaaaaaagtgaatatttttatcaaaattaatattcactagatacaaaaatcctagattacgaagaaatttgatataaactgcaacttagaaaactgtatgattgttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCGGCACATGAGATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATAACCATCTCCAAGTGCCATTATCTGATACTATGTAGATATA-ATTTAG-AAAATATTTACATAAAACAAATTAGGTCATGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTTAATTATATTAG------------------------CGAAAAAACCGCGTAAATATAATCAGTTATGCCTATATTATGTATATCTGCATTTTTAATAATTTTGCTCATGGGCCTCAACTA-TCTAT--ACACTGATTTTGACCAAGAAACTATAGT-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAAAATCGAAGTCCC-TGTTTTAACCCTGAAATTTTGTCTATCACTATCTTTTATtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|7 : atcatTTCAAATTATCTCGAA---AAAAATA-TAAAAGCCATACTC---T----AGCTGCTTTCCATCATTTGTTTT---GTTTTTC-----A----TATATCT---TTTG--C-----ATT----ATAGACCTAT---------------------ATTTATCATTTACTTTTGCTTATTACACTTACGTTACAATTTCATCTAATGTA-AA-AAA------------TCTGTATACCTTCTCGCTGA-----A---------------------ATTAAACA-AGTTCGAT
gi|7 : TCCTATTTACTGTTTTATGT-ATTTAAATCGCTGACGAAT-------------TT-CATAAAGTAAAACAA-AAAcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatattcctatttactgttttatgtatttaaatcgctgacgaatttcataaagtaaaacaaaaatatcggagactgtagatatgttacaaaagtattggcaa
gi|8 : ttcaaattatctcgaaaaaaatataaaagccatactctagctgctttccatcatttgttttgtttttcatatatcttttgcattatagacctatatttatcatttacttttgcttattacacttacgttacaatttcatctaatgtaaaaaatctgtataccttctcgctgaaattaaacaagttcgatcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatatATCTATTGA-GTTAAATTTCAGCTTTTAGATTTTATTGAT---AAAAAAAATAAA-GCAATACTC---T----ATCAGTGTTCTATCAT--GTTTT---GTTTTTC-----A----TATATTC---CCTA--TTAATAAAT----ATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAATTGCCATCTCATTAAAA-TA-AG-AAA------------AGTGTATACATTATTGCTGA-AATTA---------------------AC-AAACA-AGTTCTATTTACTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGCtatcggagactgtagatatgttacaaaagtattggcaa
gi|9 : TATCTATTGA-GTTAAATTTCAGTTTTTAGATTCTATTGATTAAAAAAAAA-TAAA-GCAATACTC---T---------------ATCAT--GTTTT---GTTTTTC-----A----TATATTC---CCTA--TTAATAAAT----ATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATCTCATTAAAAAT--AA-AAA------------AGTGTATACATTATCGCTGA-AATTA---------------------A-CAAACA-AGTTCTATTGGCTGTTTTATTTAATTTTAA----------CT-------------TT-CATAAAGTAAAACAATAAAGCgaaacaaaataccggaaactgtcaatatgtcaggaaagtctcggcgagt
3 sequences could not be aligned to this reference sequence:
Unaligned ( gi|20 ): ATATTCCTATTAATTGTTTTACTTTAAATTGTGCTGACGATTTTCATATAAGTAAAATAATACAGTGAAA
Unaligned ( gi|21 ): AAGGATTAGCTATGATCTCTCTAATTCCTTGTTTTAAATAGTACTGACAAATTTCATAAAGAAAAACAA
Unaligned ( gi|22 ): AAATATTAAAGCAAGACAAAACTACCGGAGACTGCCGATATAATACGAAAGACTCGACGAGTA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 1 1 7777777777777777 1 3333333333 99999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 3333333333333 11 2 33333 11 3333333333 3333333333 5555555555555555555 11 1 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 111111111 11111 222222222222 111111111 222222222222 111111111111 2222222222222222222222222
lowQualScore : 1111 1 1 1 0 0 0 1 1 3 2222222222222222 2 0 444 0 4444444444 2 77777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1 3 3 6 66666 1 0 0 0 4444444444444 11 8 0 1 999 00000 88 4444444444 11 22 0 5555555555 5555555555555555555 8 0 1 1 0 0 11 8 11 1 8 0 1 0 0 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 33 777 4 4 333333333 2 777 00000 55 99 999999999999 55 666666666 0 0 33 5 3 0 3 5 8 000000000000 4 4 3 666 8888 666 888888888888 3 6666666666666666666666666 4
lowQualScore : .... . . . . . . . . . ................ . . ... . .......... . ................................................................................... . . . . . ..... . . . . ............. .. . . . ... ..... .. .......... .. .. . .......... ................... . . . . . . .. . .. . . . . . . ................................................................................................................................ . .. ... . . ......... . ... ..... .. .. ............ .. ......... . . .. . . . . . . ............ . . . ... .... ... ............ . ......................... .
lowQualScore : 2222 0 0 0 0 0 8 0 0 2 0000000000000000 0 0 888 2 8888888888 5 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 0 2 7 7 33333 8 8 6 8 4444444444444 00 0 0 0 222 77777 33 4444444444 00 22 8 0000000000 0000000000000000000 0 8 4 4 8 6 88 0 88 0 0 8 4 8 0 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 44 000 0 0 555555555 5 000 00000 55 55 111111111111 55 000000000 9 7 22 9 2 7 5 7 0 555555555555 4 0 6 444 5555 444 666666666666 6 7777777777777777777777777 0
consensus : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAG-A-TTNA--AA--AAAAC--GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTCA-TC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
Reference ( family-648 ) : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAG-A-NTTA--AA--AAAAC--GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTCACTC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|1 : AGTTGGCACATGAAATTGAAATTTATGTTGAAGCATCGAATCAATCCGGCGTTACTGTTATGAATACATTAACATCTCCAAGTGCCATTATCCGAAAGTATGTAGATCTA-TTTCAG-AAAATATTTACATAAAACAAATAAAGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCATTTTTTAATTATACTAGAGGACTT-AT-------------ACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGTATCATTAATAATTTT-CTCATTGTCATTAACT-TC--T-TTTACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAATATAGCGGTCCCATGTATTGACCCTGAAATTGAGTCTATCACTGTCTTTTATTTAACAAAAGTATCAGTTCAAACTTGAAATGAAATTGATAATACGTTAAATAGAAACTTATACTGTGACAAAGTATCAATTCCAATGACAA-ACCAGAGATGCATTGACAATAAATTAACTGGATAAATATTTCCCAACATGATAAAAACAATAATTCAAATTAT-A-T---------AAAAC--GCTTT-AAAAA-TTACAGTAATTAAAAGAACAGACCTTAAGCATTTATTGTATTAACTACTGGACAAGCAGTGACTAACATGTACTTAT-C-CCCCACACCCACCTTCAATC--CTCGTAGAAATGTGTGCAATATGTACAATAGCGCTTATCACTCCTGGGTTTATGACAGGATGTATGCAACACTACATCATAATTATTATCACACGGCC-------------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTAAAATTAACATTAAACATTCAATTAAACGGCCTGCAAACCGATAAATTTTAATGTCCTATGTGCATTTTGTAGAAATATG-TAAAAA-GAATTAAGTGATCA-TATTTATCAAAATTAATATTCACAAGATACGGGAATACAAAAAACCTAGTTTATGAATAGATTTGTTGTAAGCTAC-ATTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCTATTGA-G-TGAATTTCAGCTTTCAGATTCTATTGAT---AGAGAAA-T-AA-GCAATACTCTGATT----ATCAGTGTTCTCTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA---TA-A-----------ATTTATCTATTCCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTGAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCACTGA-AATTA-ATTAAAC---A----AGTTCTATT---AA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|10 : ATCAATTGA-GTTAAATTTCAGCTTTCCGATTCCCACAAT---AAAACCA-TAAA-GCAATACTC----TG---GTCA-T-TTCTATCATTTGTTTG---ATTTTTC-----ATAACTATATGCTATCTTA-ATT-AA-----AATTCAACTATTTCT--TT-TACTTCGCTGTTATTTGT-ATTTACTT-------TTACAC--ATGTTACTGTTCTA-TAAAAATAAATGAATGAATTTGTCCTAATGTTTATATTAT--CTAATAATTATA-TATACTTTATCATAGTATTATTAAATATACTCCTATTAACTGTTTCATTT-ATTTTAA----------A
gi|11 : ATTTCAGCTTTCAGATTATATAGAT---AAATAA--TAAA-GCAGTACTC----T----AGCGGGTTTCTCTCATTTGTTTG---GTTGATA-----ATA--TTTTCTTTA--TTA---T-AAATTATTATTTATCTATTTCA--TTACA---------TATTGAGTATTTATTTGCGCTTATTACACATACGTTTCCGTTTAATCTGAAAT-AA-AAG------------TATGTATACCCTCTCGCTAA-AATAA-A-CAAAC---
gi|12 : gtaatAGTTGGCACATGAAATTGAGTTTTATATTCAAGCATAGGATCAGCC----GTTACTGTTATGAATACATCACCATCTCCACGTGCCATTATCTGATACTATGTAGATATATTTTTAGAAAAATATTTACATGAAACAAATGAGGTCACGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTGAATTATATAAGtaatcaaaaaattagatcaaatgtatttacaattcataggcatttttaagtcgaatatatatgttgt
gi|13 : atcCTATT---TA------------TTGTTTTACTT-ATTTTAA----------ATAGCGCTTACGAATTT-CCTAAAGTAATACAATAAAGCcgaaaaaacaactaaaaatac
gi|15 : aaaaaagttcgatcactgatgaaatgattatcgtaatgtgtatcttattttatgattgtatatttcatatttattgtattattctacatattaATTTAACCTGACATCAAGTCTGTCATTATCT---ATTTAGGAAAAGTATCAGTTATTACCAGAAATGAAAATGACAATTAGTAAAATAG------ATAC--TGACAAAATATCTATTTCAAT-ACAATATTAG---T-CATCAACAACAgaaacaatataacggatagtgtcgatatgtttctaatgtttaggcgag
gi|16 : aaacacaagacatccaAATACTATGACAATGTATCAATTTCAATGACAA-ACCAGAAGTAAATAAACAAAAAAATAACTGGATACATAGTTACTAACATGATAAAAACAATTATTTAAATTAG-A-AGAA--AA--AAAAC--GCTAT-ttatatcacaaactaaagacatataacaaattaagtaag
gi|17 : TTG-A-TAAAA---A----AGTTCTATT---TA------------CTGTTTTATTT-ACTTTAA----------AT-------------CG-CATAAAGTAAAACAATAAAGC
gi|18 : -TAAAC---A----AGTTCTATT---TA------------CTGTTTCATTT-ATTTTGA----------AT-------------TTCCAT-AAGTAAAACAATAAAGgaaacaaaataccgtaaactgtcgatatgttatgaaagactcggcgagta
gi|19 : TAACAAAAATCTAGGTCCC-TGTATCGACTATAAAATTTTGTCTATCACAACCTTTTATTTAGGAAAAGTATCAATTTAAagaaacaaaaccctggaaactgtcgatatgttacgaaagtctcggcgagta
gi|2 : AGTTGGCACATGGAATTGAGTTTTATGTTTAAACATCGAATCAATC----GTTATTTTTATGAATACAAAACAATCTCCAAGTGTCATTATATGAAACTATGTAGATCTA-TTTCAG-AAAATATTTACATCAAATAAATCAGGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCCTTTTTTATTAATATTAGAGGACTTAATTT-----GACCAAACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTGATT-TCCTT-T--ACACTGATTTTGACAAAGGAACTTTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA-AAAGATAAAGGTCCCATGTATTGACCTTGAAATTTAGTCTATCTTTATCTTTTATTTAAGAAAAGTATCAGTTAAATCTAGAAATAAAATTGATAATAAGTAAAATAGAAACTTATTCTATGAAAAAGTAACAATTTCAATGACAA-ACCAGAGATACAGTAACAATAAATTAACTGGATAAATAGTTACCAAC--------AACAATTATTCAAATAAG-ATTTTAACAA--AAAAC--GCTATAAAAAA-ATACAGTAATTAGCAGAACAGACCTTAAGCAATTATTATATTAACTAAATGACAAGCAGTGACCAATTTGTACTAAT-C-C
gi|2 : tcTG-----TACTAATCCAGGGTTTATGGCAGGATGTATGCAACATTACATAATT--TATTACCACACGTACTCT----------AATTAACGATAATT----------AAGTTATT-TATGGAGTCAACGACAGCAGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTTCATTATGTAGATATATGTTAAAAATAAATTAAATGAACATTTTTTATCAAAATTGATATTCACTAGATACGGGAATGCAAAAATCCTAGTTTATGAGAAGATTTGTTATAAAATACAACTTACGATATTGTACGATTG-Tagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|2 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaattTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----C----ATCAGTGTTCTATCATTTGTTAT---GTTT---------------TTCCCTA--TTA-ACT-AA-----AATTTATCTATTTAT--TTATA---------TATTTATAATTTAC--------------------------TTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGtcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|23 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaatttgtactaatccagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGTTGGCTCATGGAATTGAGTTTTATGTTCAAGCGT
gi|3 : gatcAGATAAAACGTCCTTTCTTAATTATATTTGAGGACTT-ATTTTGAACA----AACGAAACACTCACGTAAATACAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTATTAATTTT-CTCATTGTCA------------------A-TGATTTTGACCAAGGAACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT-------AACACAAATCGAGGTCCGATGTATTGACCCTGAAACTTAGTCTATCACTAGCTTTTATCTAAGAAAAGTATCAGTTAAAATTAGAAATGAAATTAATCATAAGTAAAATAGAAACTAATACTAAGTCAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTAGATAAATAGTTACCAACATGATACAAAAAA-TATTCAAACTAGTT-TTTA--AAACAAAAC--GCTAT-AAACATTTACAGTAATTAGCAGAGCAGACCTTAAGCAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAAC-T-CCt
gi|3 : ACTCCATGGTTTATGGCAGGATGTATACAACATTACATCATAATTATTATCACACGTCCTCTGATTATCGATAATTA--------T----------AAGTTATT-TAGGGAGACAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGGCCTGCATACCGATAAATTTTAATGTTCTATGTGCATTATGTAG------G-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATTAAGTGACTTGTTATAAACTACAACTTAGGATATTGTACGATTatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|3 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACAC----T----ATCCGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCTTAT-TTA-T-T-AT-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACATAAGTTGCCATTTTATTAAAAGT-AA-AAC------------TTTGTAAACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CCGTTTTATTT-ATTTTGA----------AT-------------TT-CATAAAGTAAAA-AATAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|4 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaactccatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTAATACTATGACAAAGTATCAAGTTCAATGACAA-----------C-----CAATAAATTAACTGGATAAATAGTTACCAATATGATAAAAATAATTATTCAAATTAG-A-TTAA--AA--AAAAAAAGCTAT-AAAAAATTACAATAATTAGCAAAACAGACCTTAAGTAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAATTC-CCCCACACCCACCTTCA-----CGCG--GTATTGTGTGCAATATGTA-A------------ACTCCAGGGTTTATGATAGGATGTATGCAACATTAAATCATTATTGTTATCAAACGTCCTCT----------AATTA--------TCGATAATTAGAAGTTATT-CAGTGAGTCAATGACAGCGGTTTTAAAATAACATTGAACATTCAATTAAGCGGTCTGCAAACCGATGAATTGTAATGTCCTTTGTGCATTATGTAGATATATG-TAAAAA-AAAATAAGTCAATA-TTTTTATCAAAGTTAATATTCATTAGATACTGGAATACAAAAATCCTAGTTTATGAAAAGATTTTTTATAAACTACAACTTAGGATATTGTACGATTG-T
gi|4 : GCTTTCAGATTCTATTGAT---GAAGAAA-TAAA-GCAATACTC----TGATTATCAGTGTTCTGTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-TTAA-----TATTTATCAATTTTTGTTTATA---------TATTTATAATTAACTTTCGCTGATTACTCTTAAGTTGCCATTTCAT--AAAATATATAAA------------AATGTATACATTCTTGCTGA-AATTA-A-TAAAC---A----GGTTCTATT---TA------------CTGTTTTATTT-ATTTAAA----------AT-------------TT-CATCAACTAAAACAATAAAGCtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctttcagattctattgatgaagaaataaagcaatactctgattatcagtgttctgtcatttgttttgtttttcatatattccctattaattaatatttatcaatttttgtttatatatttataattaactttcgctgattactcttaagttgccatttcataaaatatataaaaatgtatacattcttgctgaaattaataaacaggttctatttactgttttatttatttaaaatttcatcaactaaaacaataaagcgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : ctaatactatgacaaagtatcaagttcaatgacaaccaataaattaactggataaatagttaccaatatgataaaaataattattcaaattagattaaaaaaaaaaagctataaaaaattacaataattagcaaaacagaccttaagtaattattgtataaactacaggacaagcagtgactaacttgtactaattcccccacacccaccttcacgcggtattgtgtgcaatatgtaaactccagggtttatgataggatgtatgcaacattaaatcattattgttatcaaacgtcctctaattatcgataattagaagttattcagtgagtcaatgacagcggttttaaaataacattgaacattcaattaagcggtctgcaaaccgatgaattgtaatgtcctttgtgcattatgtagatatatgtaaaaaaaaataagtcaatatttttatcaaagttaatattcattagatactggaatacaaaaatcctagtttatgaaaagattttttataaactacaacttaggatattgtacgattgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACTACAGGACACGCAGTGACTGACTTGTACTAAT-CTCCCCACACCCACCTTCACTCGACGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCAATATTATTATCACATGTTCTCT----------AATTA--------T----------TGATAATCATAAGTTTTC-ATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGACCTGCATACCGATA------AATGTACTATGTGCTTTATGTAGATATATC-TAAAAA------AAGTGAATA-TTTTTATCAAAATTAATATTCACTAG--------ATACAAAAATCCTAGATTACGAAGAAATTTGATATAAACTGCAACTTAGAAAACTGTATGATTGTTGACAgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : tTATCTATTGAAG--GAATTTTAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCCGTGTTCTATCATTTGTTTTTTTGTTTTTTTTTATATA--TATTCCCTA--TTA-A-TTAA-----TAGTTATCTATTAAT--TTATA---------TATTTATAATTTACTTTCGC------------------CATTTCATTAAAAATAAA-A-A------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AATCCCATT---AA------------CAGTTTTATTT-ATTTT-------------------------------ATAAAGTAAAATAATAAAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgaaggaattttagctttcagattctattgataaagaaataaagcaatactctatccgtgttctatcatttgtttttttgtttttttttatatatattccctattaattaatagttatctattaatttatatatttataatttactttcgccatttcattaaaaataaaaaaatgtatacattctcgctgaaattaataaacaaatcccattaacagttttatttattttataaagtaaaataataaagtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|6 : taactacaggacacgcagtgactgacttgtactaatctccccacacccaccttcactcgacgcggtaatgtgtgcaatatgtaaatatatcactccagggtttatggcaggatgtatgcaacattacatcaatattattatcacatgttctctaattattgataatcataagttttcatgacagcggttttaaaataacattaaacattcaatttaacgacctgcataccgataaatgtactatgtgctttatgtagatatatctaaaaaaagtgaatatttttatcaaaattaatattcactagatacaaaaatcctagattacgaagaaatttgatataaactgcaacttagaaaactgtatgattgttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCGGCACATGAGATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATAACCATCTCCAAGTGCCATTATCTGATACTATGTAGATATA-ATTTAG-AAAATATTTACATAAAACAAATTAGGTCATGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTTAATTATATTAG------------------------CGAAAAAACCGCGTAAATATAATCAGTTATGCCTATATTATGTATATCTGCATTTTTAATAATTTTGCTCATGGGCCTCAACTATC--TAT--ACACTGATTTTGACCAAGAAACTATAGT-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAAAATCGAAGTCCC-TGTTTTAACCCTGAAATTTTGTCTATCACTATCTTTTATtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|7 : atcatTTCAAATTATCTCGAA---AAAAATA-TAAAAGCCATACTC----T----AGCTGCTTTCCATCATTTGTTTT---GTTTTTC-----ATA--TAT---CTT--TTGCA-T--------TATAGACC------------TA---------TATTTATCATTTACTTTTGCTTATTACACTTACGTTACAATTTCATCTAATGTAAA-AAA------------TCTGTATACCTTCTCGCTGA-AAT-----TAAAC---A----AGTTCGAT
gi|7 : TCCTATT---TA------------CTGTTTTATGT-ATTTAAATCGCTGACGAAT-------------TT-CATAAAGTAAAACAA-AAAcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatattcctatttactgttttatgtatttaaatcgctgacgaatttcataaagtaaaacaaaaatatcggagactgtagatatgttacaaaagtattggcaa
gi|8 : ttcaaattatctcgaaaaaaatataaaagccatactctagctgctttccatcatttgttttgtttttcatatatcttttgcattatagacctatatttatcatttacttttgcttattacacttacgttacaatttcatctaatgtaaaaaatctgtataccttctcgctgaaattaaacaagttcgatcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatatATCTATTGA-GTTAAATTTCAGCTTTTAGATTTTATTGAT---AAAAAAAATAAA-GCAATACTC----T----ATCAGTGTTCTATCAT--GTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-TAAA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAATTGCCATCTCATT-AAAATAAG-AAA------------AGTGTATACATTATTGCTGA-AATTA-A-CAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGCtatcggagactgtagatatgttacaaaagtattggcaa
gi|9 : TATCTATTGA-GTTAAATTTCAGTTTTTAGATTCTATTGATTAAAAAAAAA-TAAA-GCAATACTC----T----ATCA-------------TGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AAA----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATCTCATTAAAAAT-AA-AAA------------AGTGTATACATTATCGCTGA-AATTA-A-CAAAC---A----AGTTCTATT---GG------------CTGTTTTATTTAATTTTAA----------CT-------------TT-CATAAAGTAAAACAATAAAGCgaaacaaaataccggaaactgtcaatatgtcaggaaagtctcggcgagt
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): CGATCACATCTATATAGCTATTACATCACATTTCAATAATGCACAAACTGTGTTTAAAAGTATCGGGTTAAAAAATAAACTTCTTTATTCATAGTATTATTCTACATATTCCTATTTACTGTTTTATTTATTTTAAATTTTGTAAAGTAAAACAAAAATACCGGAGACTGTTGATATGTTACGAAAGTATCGGCGAGT
Unaligned ( gi|20 ): ATATTCCTATTAATTGTTTTACTTTAAATTGTGCTGACGATTTTCATATAAGTAAAATAATACAGTGAAA
Unaligned ( gi|21 ): AAGGATTAGCTATGATCTCTCTAATTCCTTGTTTTAAATAGTACTGACAAATTTCATAAAGAAAAACAA
Unaligned ( gi|22 ): AAATATTAAAGCAAGACAAAACTACCGGAGACTGCCGATATAATACGAAAGACTCGACGAGTA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 1 1 7777777777777777 1 3333333333 99999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 2222222222222 11 2 4444444 11 1 2222222 3333333333 5555555555555555555 11 1 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 111111111 11111 222222222222 111111111 222222222222 111111111111 2222222222222222222222222
lowQualScore : 1111 1 1 1 0 0 0 1 1 3 2222222222222222 2 0 444 0 4444444444 2 77777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1 3 3 6 66666 1 0 0 0 7777777777777 11 8 0 1 999 1111111 88 3 9999999 11 22 0 5555555555 5555555555555555555 8 0 1 1 0 0 11 8 11 1 8 0 1 0 0 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 33 777 4 4 333333333 2 777 00000 55 99 999999999999 55 666666666 0 0 33 5 3 0 3 5 8 000000000000 4 4 3 666 8888 666 888888888888 3 6666666666666666666666666 4
lowQualScore : .... . . . . . . . . . ................ . . ... . .......... . ................................................................................... . . . . . ..... . . . . ............. .. . . . ... ....... .. . ....... .. .. . .......... ................... . . . . . . .. . .. . . . . . . ................................................................................................................................ . .. ... . . ......... . ... ..... .. .. ............ .. ......... . . .. . . . . . . ............ . . . ... .... ... ............ . ......................... .
lowQualScore : 2222 0 0 0 0 0 8 0 0 2 0000000000000000 0 0 888 2 8888888888 5 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 0 2 7 7 33333 8 8 6 8 2222222222222 00 0 0 0 222 7777777 33 3 0000000 00 22 8 0000000000 0000000000000000000 0 8 4 4 8 6 88 0 88 0 0 8 4 8 0 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 44 000 0 0 555555555 5 000 00000 55 55 111111111111 55 000000000 9 7 22 9 2 7 5 7 0 555555555555 4 0 6 444 5555 444 666666666666 6 7777777777777777777777777 0
consensus : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAG-A-TTNA--AA--AAAAC--GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTC-A-TC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
Reference ( family-648 ) : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAG-A-TTNA--AA--AAAAC--GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTC-A-TC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|1 : AGTTGGCACATGAAATTGAAATTTATGTTGAAGCATCGAATCAATCCGGCGTTACTGTTATGAATACATTAACATCTCCAAGTGCCATTATCCGAAAGTATGTAGATCTA-TTTCAG-AAAATATTTACATAAAACAAATAAAGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCATTTTTTAATTATACTAGAGGACTT-AT-------------ACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGTATCATTAATAATTTT-CTCATTGTCATTAACT-TC--T-TTTACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAATATAGCGGTCCCATGTATTGACCCTGAAATTGAGTCTATCACTGTCTTTTATTTAACAAAAGTATCAGTTCAAACTTGAAATGAAATTGATAATACGTTAAATAGAAACTTATACTGTGACAAAGTATCAATTCCAATGACAA-ACCAGAGATGCATTGACAATAAATTAACTGGATAAATATTTCCCAACATGATAAAAACAATAATTCAAATTAT-A-T---------AAAAC--GCTTT-AAAAA-TTACAGTAATTAAAAGAACAGACCTTAAGCATTTATTGTATTAACTACTGGACAAGCAGTGACTAACATGTACTTAT-C-CCCCACACCCACCTTCAA-TC--CTCGTAGAAATGTGTGCAATATGTACAATAGCGCTTATCACTCCTGGGTTTATGACAGGATGTATGCAACACTACATCATAATTATTATCACACGGCC-------------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTAAAATTAACATTAAACATTCAATTAAACGGCCTGCAAACCGATAAATTTTAATGTCCTATGTGCATTTTGTAGAAATATG-TAAAAA-GAATTAAGTGATCA-TATTTATCAAAATTAATATTCACAAGATACGGGAATACAAAAAACCTAGTTTATGAATAGATTTGTTGTAAGCTAC-ATTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCTATTGA-G-TGAATTTCAGCTTTCAGATTCTATTGAT---AGAGAAA-T-AA-GCAATACTCTGATT----ATCAGTGTTCTCTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA---TA-A-----------ATTTATCTATTCCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTGAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCACTGA-AATTA-ATTAAAC---A----AGTTCTATT---AA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|10 : ATCAATTGA-GTTAAATTTCAGCTTTCCGATTCCCACAAT---AAAACCA-TAAA-GCAATACTC----TG---GTCA-T-TTCTATCATTTGTTTG---ATTTTTC-----ATAACTATATGCTATCTTA-ATT-AA-----AATTCAACTATTTCT--TT-TACTTCGCTGTTATTTGT-ATTTACTT-------TTACAC--ATGTTACTGTTCTA-TAAAAATAAATGAATGAATTTGTCCTAATGTTTATATTAT--CTAATAATTATA-TATACTTTATCATAGTATTATTAAATATACTCCTATTAACTGTTTCATTT-ATTTTAA----------A
gi|11 : ATTTCAGCTTTCAGATTATATAGAT---AAATAA--TAAA-GCAGTACTC----T----AGCGGGTTTCTCTCATTTGTTTG---GTTGATA-----ATA--TTTTCTTTA--TTA---T-AAATTATTATTTATCTATTTCA--TTACA---------TATTGAGTATTTATTTGCGCTTATTACACATACGTTTCCGTTTAATCTGAAAT-AA-AAG------------TATGTATACCCTCTCGCTAA-AATAA-A-CAAAC---
gi|12 : gtaatAGTTGGCACATGAAATTGAGTTTTATATTCAAGCATAGGATCAGCC----GTTACTGTTATGAATACATCACCATCTCCACGTGCCATTATCTGATACTATGTAGATATATTTTTAGAAAAATATTTACATGAAACAAATGAGGTCACGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTGAATTATATAAGtaatcaaaaaattagatcaaatgtatttacaattcataggcatttttaagtcgaatatatatgttgt
gi|13 : atcCTATT---TA------------TTGTTTTACTT-ATTTTAA----------ATAGCGCTTACGAATTT-CCTAAAGTAATACAATAAAGCcgaaaaaacaactaaaaatac
gi|15 : aaaaaagttcgatcactgatgaaatgattatcgtaatgtgtatcttattttatgattgtatatttcatatttattgtattattctacatattaATTTAACCTGACATCAAGTCTGTCATTATCT---ATTTAGGAAAAGTATCAGTTATTACCAGAAATGAAAATGACAATTAGTAAAATAG------ATAC--TGACAAAATATCTATTTCAAT-ACAATATTAG---T-CATCAACAACAgaaacaatataacggatagtgtcgatatgtttctaatgtttaggcgag
gi|16 : aaacacaagacatccaAATACTATGACAATGTATCAATTTCAATGACAA-ACCAGAAGTAAATAAACAAAAAAATAACTGGATACATAGTTACTAACATGATAAAAACAATTATTTAAATTAG-A-AGAA--AA--AAAAC--GCTAT-ttatatcacaaactaaagacatataacaaattaagtaag
gi|17 : TTG-A-TAAAA---A----AGTTCTATT---TA------------CTGTTTTATTT-ACTTTAA----------AT-------------CG-CATAAAGTAAAACAATAAAGC
gi|18 : -TAAAC---A----AGTTCTATT---TA------------CTGTTTCATTT-ATTTTGA----------AT-------------TTCCAT-AAGTAAAACAATAAAGgaaacaaaataccgtaaactgtcgatatgttatgaaagactcggcgagta
gi|19 : TAACAAAAATCTAGGTCCC-TGTATCGACTATAAAATTTTGTCTATCACAACCTTTTATTTAGGAAAAGTATCAATTTAAagaaacaaaaccctggaaactgtcgatatgttacgaaagtctcggcgagta
gi|2 : AGTTGGCACATGGAATTGAGTTTTATGTTTAAACATCGAATCAATC----GTTATTTTTATGAATACAAAACAATCTCCAAGTGTCATTATATGAAACTATGTAGATCTA-TTTCAG-AAAATATTTACATCAAATAAATCAGGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCCTTTTTTATTAATATTAGAGGACTTAATTT-----GACCAAACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTGATT-TCCTT-T--ACACTGATTTTGACAAAGGAACTTTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA-AAAGATAAAGGTCCCATGTATTGACCTTGAAATTTAGTCTATCTTTATCTTTTATTTAAGAAAAGTATCAGTTAAATCTAGAAATAAAATTGATAATAAGTAAAATAGAAACTTATTCTATGAAAAAGTAACAATTTCAATGACAA-ACCAGAGATACAGTAACAATAAATTAACTGGATAAATAGTTACCAAC--------AACAATTATTCAAATAAG-ATTTTAACAA--AAAAC--GCTATAAAAAA-ATACAGTAATTAGCAGAACAGACCTTAAGCAATTATTATATTAACTAAATGACAAGCAGTGACCAATTTGTACTAAT-C-C
gi|2 : tcTG-----TACTAATCCAGGGTTTATGGCAGGATGTATGCAACATTACATAATT--TATTACCACACGTACTCT----------AATTAACGATAATT----------AAGTTATT-TATGGAGTCAACGACAGCAGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTTCATTATGTAGATATATGTTAAAAATAAATTAAATGAACATTTTTTATCAAAATTGATATTCACTAGATACGGGAATGCAAAAATCCTAGTTTATGAGAAGATTTGTTATAAAATACAACTTACGATATTGTACGATTG-Tagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|2 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaattTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----C----ATCAGTGTTCTATCATTTGTTAT---GTTT---------------TTCCCTA--TTA-ACT-AA-----AATTTATCTATTTAT--TTATA---------TATTTATAATTTAC--------------------------TTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGtcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|23 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaatttgtactaatccagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGTTGGCTCATGGAATTGAGTTTTATGTTCAAGCGT
gi|3 : gatcAGATAAAACGTCCTTTCTTAATTATATTTGAGGACTT-ATTTTGAACA----AACGAAACACTCACGTAAATACAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTATTAATTTT-CTCATTGTCA------------------A-TGATTTTGACCAAGGAACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT-------AACACAAATCGAGGTCCGATGTATTGACCCTGAAACTTAGTCTATCACTAGCTTTTATCTAAGAAAAGTATCAGTTAAAATTAGAAATGAAATTAATCATAAGTAAAATAGAAACTAATACTAAGTCAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTAGATAAATAGTTACCAACATGATACAAAAAA-TATTCAAACTAGTT-TTTA--AAACAAAAC--GCTAT-AAACATTTACAGTAATTAGCAGAGCAGACCTTAAGCAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAAC-T-CCt
gi|3 : ACTCCATGGTTTATGGCAGGATGTATACAACATTACATCATAATTATTATCACACGTCCTCTGATTATCGATAATTA--------T----------AAGTTATT-TAGGGAGACAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGGCCTGCATACCGATAAATTTTAATGTTCTATGTGCATTATGTAG------G-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATTAAGTGACTTGTTATAAACTACAACTTAGGATATTGTACGATTatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|3 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACAC----T----ATCCGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCTTAT-TTA-T-T-AT-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACATAAGTTGCCATTTTATTAAAAGT-AA-AAC------------TTTGTAAACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CCGTTTTATTT-ATTTTGA----------AT-------------TT-CATAAAGTAAAA-AATAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|4 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaactccatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTAATACTATGACAAAGTATCAAGTTCAATGACAA-----------C-----CAATAAATTAACTGGATAAATAGTTACCAATATGATAAAAATAATTATTCAAATTAG-A-TTAA--AA--AAAAAAAGCTAT-AAAAAATTACAATAATTAGCAAAACAGACCTTAAGTAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAATTC-CCCCACACCCACCTTC-A-----CGCG--GTATTGTGTGCAATATGTA-AA------------CTCCAGGGTTTATGATAGGATGTATGCAACATTAAATCATTATTGTTATCAAACGTCCTCT----------AATTA--------TCGATAATTAGAAGTTATT-CAGTGAGTCAATGACAGCGGTTTTAAAATAACATTGAACATTCAATTAAGCGGTCTGCAAACCGATGAATTGTAATGTCCTTTGTGCATTATGTAGATATATG-TAAAAA-AAAATAAGTCAATA-TTTTTATCAAAGTTAATATTCATTAGATACTGGAATACAAAAATCCTAGTTTATGAAAAGATTTTTTATAAACTACAACTTAGGATATTGTACGATTG-T
gi|4 : GCTTTCAGATTCTATTGAT---GAAGAAA-TAAA-GCAATACTC----TGATTATCAGTGTTCTGTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-TTAA-----TATTTATCAATTTTTGTTTATA---------TATTTATAATTAACTTTCGCTGATTACTCTTAAGTTGCCATTTCAT--AAAATATATAAA------------AATGTATACATTCTTGCTGA-AATTA-A-TAAAC---A----GGTTCTATT---TA------------CTGTTTTATTT-ATTTAAA----------AT-------------TT-CATCAACTAAAACAATAAAGCtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctttcagattctattgatgaagaaataaagcaatactctgattatcagtgttctgtcatttgttttgtttttcatatattccctattaattaatatttatcaatttttgtttatatatttataattaactttcgctgattactcttaagttgccatttcataaaatatataaaaatgtatacattcttgctgaaattaataaacaggttctatttactgttttatttatttaaaatttcatcaactaaaacaataaagcgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : ctaatactatgacaaagtatcaagttcaatgacaaccaataaattaactggataaatagttaccaatatgataaaaataattattcaaattagattaaaaaaaaaaagctataaaaaattacaataattagcaaaacagaccttaagtaattattgtataaactacaggacaagcagtgactaacttgtactaattcccccacacccaccttcacgcggtattgtgtgcaatatgtaaactccagggtttatgataggatgtatgcaacattaaatcattattgttatcaaacgtcctctaattatcgataattagaagttattcagtgagtcaatgacagcggttttaaaataacattgaacattcaattaagcggtctgcaaaccgatgaattgtaatgtcctttgtgcattatgtagatatatgtaaaaaaaaataagtcaatatttttatcaaagttaatattcattagatactggaatacaaaaatcctagtttatgaaaagattttttataaactacaacttaggatattgtacgattgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACTACAGGACACGCAGTGACTGACTTGTACTAAT-CTCCCCACACCCACCTTC-ACTCGACGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCAATATTATTATCACATGTTCTCT----------AATTA--------T----------TGATAATCATAAGTTTTC-ATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGACCTGCATACCGATA------AATGTACTATGTGCTTTATGTAGATATATC-TAAAAA------AAGTGAATA-TTTTTATCAAAATTAATATTCACTAG--------ATACAAAAATCCTAGATTACGAAGAAATTTGATATAAACTGCAACTTAGAAAACTGTATGATTGTTGACAgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : tTATCTATTGAAG--GAATTTTAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCCGTGTTCTATCATTTGTTTTTTTGTTTTTTTTTATATA--TATTCCCTA--TTA-A-TTAA-----TAGTTATCTATTAAT--TTATA---------TATTTATAATTTACTTTCGC------------------CATTTCATTAAAAATAAA-A-A------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AATCCCATT---AA------------CAGTTTTATTT-ATTTT-------------------------------ATAAAGTAAAATAATAAAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgaaggaattttagctttcagattctattgataaagaaataaagcaatactctatccgtgttctatcatttgtttttttgtttttttttatatatattccctattaattaatagttatctattaatttatatatttataatttactttcgccatttcattaaaaataaaaaaatgtatacattctcgctgaaattaataaacaaatcccattaacagttttatttattttataaagtaaaataataaagtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|6 : taactacaggacacgcagtgactgacttgtactaatctccccacacccaccttcactcgacgcggtaatgtgtgcaatatgtaaatatatcactccagggtttatggcaggatgtatgcaacattacatcaatattattatcacatgttctctaattattgataatcataagttttcatgacagcggttttaaaataacattaaacattcaatttaacgacctgcataccgataaatgtactatgtgctttatgtagatatatctaaaaaaagtgaatatttttatcaaaattaatattcactagatacaaaaatcctagattacgaagaaatttgatataaactgcaacttagaaaactgtatgattgttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCGGCACATGAGATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATAACCATCTCCAAGTGCCATTATCTGATACTATGTAGATATA-ATTTAG-AAAATATTTACATAAAACAAATTAGGTCATGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTTAATTATATTAG------------------------CGAAAAAACCGCGTAAATATAATCAGTTATGCCTATATTATGTATATCTGCATTTTTAATAATTTTGCTCATGGGCCTCAACTATC--TAT--ACACTGATTTTGACCAAGAAACTATAGT-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAAAATCGAAGTCCC-TGTTTTAACCCTGAAATTTTGTCTATCACTATCTTTTATtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|7 : atcatTTCAAATTATCTCGAA---AAAAATA-TAAAAGCCATACTC----T----AGCTGCTTTCCATCATTTGTTTT---GTTTTTC-----ATA--TAT---CTT--TTGCA-T--------TATAGACC------------TA---------TATTTATCATTTACTTTTGCTTATTACACTTACGTTACAATTTCATCTAATGTAAA-AAA------------TCTGTATACCTTCTCGCTGA-AAT-----TAAAC---A----AGTTCGAT
gi|7 : TCCTATT---TA------------CTGTTTTATGT-ATTTAAATCGCTGACGAAT-------------TT-CATAAAGTAAAACAA-AAAcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatattcctatttactgttttatgtatttaaatcgctgacgaatttcataaagtaaaacaaaaatatcggagactgtagatatgttacaaaagtattggcaa
gi|8 : ttcaaattatctcgaaaaaaatataaaagccatactctagctgctttccatcatttgttttgtttttcatatatcttttgcattatagacctatatttatcatttacttttgcttattacacttacgttacaatttcatctaatgtaaaaaatctgtataccttctcgctgaaattaaacaagttcgatcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatatATCTATTGA-GTTAAATTTCAGCTTTTAGATTTTATTGAT---AAAAAAAATAAA-GCAATACTC----T----ATCAGTGTTCTATCAT--GTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-TAAA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAATTGCCATCTCATT-AAAATAAG-AAA------------AGTGTATACATTATTGCTGA-AATTA-A-CAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGCtatcggagactgtagatatgttacaaaagtattggcaa
gi|9 : TATCTATTGA-GTTAAATTTCAGTTTTTAGATTCTATTGATTAAAAAAAAA-TAAA-GCAATACTC----T----ATCA-------------TGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AAA----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATCTCATTAAAAAT-AA-AAA------------AGTGTATACATTATCGCTGA-AATTA-A-CAAAC---A----AGTTCTATT---GG------------CTGTTTTATTTAATTTTAA----------CT-------------TT-CATAAAGTAAAACAATAAAGCgaaacaaaataccggaaactgtcaatatgtcaggaaagtctcggcgagt
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): CGATCACATCTATATAGCTATTACATCACATTTCAATAATGCACAAACTGTGTTTAAAAGTATCGGGTTAAAAAATAAACTTCTTTATTCATAGTATTATTCTACATATTCCTATTTACTGTTTTATTTATTTTAAATTTTGTAAAGTAAAACAAAAATACCGGAGACTGTTGATATGTTACGAAAGTATCGGCGAGT
Unaligned ( gi|20 ): ATATTCCTATTAATTGTTTTACTTTAAATTGTGCTGACGATTTTCATATAAGTAAAATAATACAGTGAAA
Unaligned ( gi|21 ): AAGGATTAGCTATGATCTCTCTAATTCCTTGTTTTAAATAGTACTGACAAATTTCATAAAGAAAAACAA
Unaligned ( gi|22 ): AAATATTAAAGCAAGACAAAACTACCGGAGACTGCCGATATAATACGAAAGACTCGACGAGTA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 1 1 7777777777777777 1 3333333333 99999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 2222222222222 11 2 4444444 11 1 2222222 3333333333 5555555555555555555 11 1 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 111111111 11111 222222222222 111111111 222222222222 111111111111 2222222222222222222222222
lowQualScore : 1111 1 1 1 0 0 0 1 1 3 2222222222222222 2 0 444 0 4444444444 2 77777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1 3 3 6 66666 1 0 0 0 7777777777777 11 8 0 1 999 1111111 88 3 9999999 11 22 0 5555555555 5555555555555555555 8 0 1 1 0 0 11 8 11 1 8 0 1 0 0 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 33 777 4 4 333333333 2 777 00000 55 99 999999999999 55 666666666 0 0 33 5 3 0 3 5 8 000000000000 4 4 3 666 8888 666 888888888888 3 6666666666666666666666666 4
lowQualScore : .... . . . . . . . . . ................ . . ... . .......... . ................................................................................... . . . . . ..... . . . . ............. .. . . . ... ....... .. . ....... .. .. . .......... ................... . . . . . . .. . .. . . . . . . ................................................................................................................................ . .. ... . . ......... . ... ..... .. .. ............ .. ......... . . .. . . . . . . ............ . . . ... .... ... ............ . ......................... .
lowQualScore : 2222 0 0 0 0 0 8 0 0 2 0000000000000000 0 0 888 2 8888888888 5 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 0 2 7 7 33333 8 8 6 8 2222222222222 00 0 0 0 222 7777777 33 3 0000000 00 22 8 0000000000 0000000000000000000 0 8 4 4 8 6 88 0 88 0 0 8 4 8 0 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 44 000 0 0 555555555 5 000 00000 55 55 111111111111 55 000000000 9 7 22 9 2 7 5 7 0 555555555555 4 0 6 444 5555 444 666666666666 6 7777777777777777777777777 0
consensus : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAG-A-TTNA--AA--AAAAC--GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTC-A-TC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
Reference ( family-648 ) : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAG-A-TTNA--AA--AAAAC--GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTC-A-TC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|1 : AGTTGGCACATGAAATTGAAATTTATGTTGAAGCATCGAATCAATCCGGCGTTACTGTTATGAATACATTAACATCTCCAAGTGCCATTATCCGAAAGTATGTAGATCTA-TTTCAG-AAAATATTTACATAAAACAAATAAAGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCATTTTTTAATTATACTAGAGGACTT-AT-------------ACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGTATCATTAATAATTTT-CTCATTGTCATTAACT-TC--T-TTTACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAATATAGCGGTCCCATGTATTGACCCTGAAATTGAGTCTATCACTGTCTTTTATTTAACAAAAGTATCAGTTCAAACTTGAAATGAAATTGATAATACGTTAAATAGAAACTTATACTGTGACAAAGTATCAATTCCAATGACAA-ACCAGAGATGCATTGACAATAAATTAACTGGATAAATATTTCCCAACATGATAAAAACAATAATTCAAATTAT-A-T---------AAAAC--GCTTT-AAAAA-TTACAGTAATTAAAAGAACAGACCTTAAGCATTTATTGTATTAACTACTGGACAAGCAGTGACTAACATGTACTTAT-C-CCCCACACCCACCTTCAA-TC--CTCGTAGAAATGTGTGCAATATGTACAATAGCGCTTATCACTCCTGGGTTTATGACAGGATGTATGCAACACTACATCATAATTATTATCACACGGCC-------------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTAAAATTAACATTAAACATTCAATTAAACGGCCTGCAAACCGATAAATTTTAATGTCCTATGTGCATTTTGTAGAAATATG-TAAAAA-GAATTAAGTGATCA-TATTTATCAAAATTAATATTCACAAGATACGGGAATACAAAAAACCTAGTTTATGAATAGATTTGTTGTAAGCTAC-ATTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCTATTGA-G-TGAATTTCAGCTTTCAGATTCTATTGAT---AGAGAAA-T-AA-GCAATACTCTGATT----ATCAGTGTTCTCTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA---TA-A-----------ATTTATCTATTCCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTGAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCACTGA-AATTA-ATTAAAC---A----AGTTCTATT---AA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|10 : ATCAATTGA-GTTAAATTTCAGCTTTCCGATTCCCACAAT---AAAACCA-TAAA-GCAATACTC----TG---GTCA-T-TTCTATCATTTGTTTG---ATTTTTC-----ATAACTATATGCTATCTTA-ATT-AA-----AATTCAACTATTTCT--TT-TACTTCGCTGTTATTTGT-ATTTACTT-------TTACAC--ATGTTACTGTTCTA-TAAAAATAAATGAATGAATTTGTCCTAATGTTTATATTAT--CTAATAATTATA-TATACTTTATCATAGTATTATTAAATATACTCCTATTAACTGTTTCATTT-ATTTTAA----------A
gi|11 : ATTTCAGCTTTCAGATTATATAGAT---AAATAA--TAAA-GCAGTACTC----T----AGCGGGTTTCTCTCATTTGTTTG---GTTGATA-----ATA--TTTTCTTTA--TTA---T-AAATTATTATTTATCTATTTCA--TTACA---------TATTGAGTATTTATTTGCGCTTATTACACATACGTTTCCGTTTAATCTGAAAT-AA-AAG------------TATGTATACCCTCTCGCTAA-AATAA-A-CAAAC---
gi|12 : gtaatAGTTGGCACATGAAATTGAGTTTTATATTCAAGCATAGGATCAGCC----GTTACTGTTATGAATACATCACCATCTCCACGTGCCATTATCTGATACTATGTAGATATATTTTTAGAAAAATATTTACATGAAACAAATGAGGTCACGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTGAATTATATAAGtaatcaaaaaattagatcaaatgtatttacaattcataggcatttttaagtcgaatatatatgttgt
gi|13 : atcCTATT---TA------------TTGTTTTACTT-ATTTTAA----------ATAGCGCTTACGAATTT-CCTAAAGTAATACAATAAAGCcgaaaaaacaactaaaaatac
gi|15 : aaaaaagttcgatcactgatgaaatgattatcgtaatgtgtatcttattttatgattgtatatttcatatttattgtattattctacatattaATTTAACCTGACATCAAGTCTGTCATTATCT---ATTTAGGAAAAGTATCAGTTATTACCAGAAATGAAAATGACAATTAGTAAAATAG------ATAC--TGACAAAATATCTATTTCAAT-ACAATATTAG---T-CATCAACAACAgaaacaatataacggatagtgtcgatatgtttctaatgtttaggcgag
gi|16 : aaacacaagacatccaAATACTATGACAATGTATCAATTTCAATGACAA-ACCAGAAGTAAATAAACAAAAAAATAACTGGATACATAGTTACTAACATGATAAAAACAATTATTTAAATTAG-A-AGAA--AA--AAAAC--GCTAT-ttatatcacaaactaaagacatataacaaattaagtaag
gi|17 : TTG-A-TAAAA---A----AGTTCTATT---TA------------CTGTTTTATTT-ACTTTAA----------AT-------------CG-CATAAAGTAAAACAATAAAGC
gi|18 : -TAAAC---A----AGTTCTATT---TA------------CTGTTTCATTT-ATTTTGA----------AT-------------TTCCAT-AAGTAAAACAATAAAGgaaacaaaataccgtaaactgtcgatatgttatgaaagactcggcgagta
gi|19 : TAACAAAAATCTAGGTCCC-TGTATCGACTATAAAATTTTGTCTATCACAACCTTTTATTTAGGAAAAGTATCAATTTAAagaaacaaaaccctggaaactgtcgatatgttacgaaagtctcggcgagta
gi|2 : AGTTGGCACATGGAATTGAGTTTTATGTTTAAACATCGAATCAATC----GTTATTTTTATGAATACAAAACAATCTCCAAGTGTCATTATATGAAACTATGTAGATCTA-TTTCAG-AAAATATTTACATCAAATAAATCAGGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCCTTTTTTATTAATATTAGAGGACTTAATTT-----GACCAAACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTGATT-TCCTT-T--ACACTGATTTTGACAAAGGAACTTTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA-AAAGATAAAGGTCCCATGTATTGACCTTGAAATTTAGTCTATCTTTATCTTTTATTTAAGAAAAGTATCAGTTAAATCTAGAAATAAAATTGATAATAAGTAAAATAGAAACTTATTCTATGAAAAAGTAACAATTTCAATGACAA-ACCAGAGATACAGTAACAATAAATTAACTGGATAAATAGTTACCAAC--------AACAATTATTCAAATAAG-ATTTTAACAA--AAAAC--GCTATAAAAAA-ATACAGTAATTAGCAGAACAGACCTTAAGCAATTATTATATTAACTAAATGACAAGCAGTGACCAATTTGTACTAAT-C-C
gi|2 : tcTG-----TACTAATCCAGGGTTTATGGCAGGATGTATGCAACATTACATAATT--TATTACCACACGTACTCT----------AATTAACGATAATT----------AAGTTATT-TATGGAGTCAACGACAGCAGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTTCATTATGTAGATATATGTTAAAAATAAATTAAATGAACATTTTTTATCAAAATTGATATTCACTAGATACGGGAATGCAAAAATCCTAGTTTATGAGAAGATTTGTTATAAAATACAACTTACGATATTGTACGATTG-Tagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|2 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaattTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----C----ATCAGTGTTCTATCATTTGTTAT---GTTT---------------TTCCCTA--TTA-ACT-AA-----AATTTATCTATTTAT--TTATA---------TATTTATAATTTAC--------------------------TTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGtcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|23 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaatttgtactaatccagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGTTGGCTCATGGAATTGAGTTTTATGTTCAAGCGT
gi|3 : gatcAGATAAAACGTCCTTTCTTAATTATATTTGAGGACTT-ATTTTGAACA----AACGAAACACTCACGTAAATACAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTATTAATTTT-CTCATTGTCA------------------A-TGATTTTGACCAAGGAACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT-------AACACAAATCGAGGTCCGATGTATTGACCCTGAAACTTAGTCTATCACTAGCTTTTATCTAAGAAAAGTATCAGTTAAAATTAGAAATGAAATTAATCATAAGTAAAATAGAAACTAATACTAAGTCAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTAGATAAATAGTTACCAACATGATACAAAAAA-TATTCAAACTAGTT-TTTA--AAACAAAAC--GCTAT-AAACATTTACAGTAATTAGCAGAGCAGACCTTAAGCAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAAC-T-CCt
gi|3 : ACTCCATGGTTTATGGCAGGATGTATACAACATTACATCATAATTATTATCACACGTCCTCTGATTATCGATAATTA--------T----------AAGTTATT-TAGGGAGACAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGGCCTGCATACCGATAAATTTTAATGTTCTATGTGCATTATGTAG------G-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATTAAGTGACTTGTTATAAACTACAACTTAGGATATTGTACGATTatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|3 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACAC----T----ATCCGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCTTAT-TTA-T-T-AT-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACATAAGTTGCCATTTTATTAAAAGT-AA-AAC------------TTTGTAAACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CCGTTTTATTT-ATTTTGA----------AT-------------TT-CATAAAGTAAAA-AATAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|4 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaactccatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTAATACTATGACAAAGTATCAAGTTCAATGACAA-----------C-----CAATAAATTAACTGGATAAATAGTTACCAATATGATAAAAATAATTATTCAAATTAG-A-TTAA--AA--AAAAAAAGCTAT-AAAAAATTACAATAATTAGCAAAACAGACCTTAAGTAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAATTC-CCCCACACCCACCTTC-A-----CGCG--GTATTGTGTGCAATATGTA-AA------------CTCCAGGGTTTATGATAGGATGTATGCAACATTAAATCATTATTGTTATCAAACGTCCTCT----------AATTA--------TCGATAATTAGAAGTTATT-CAGTGAGTCAATGACAGCGGTTTTAAAATAACATTGAACATTCAATTAAGCGGTCTGCAAACCGATGAATTGTAATGTCCTTTGTGCATTATGTAGATATATG-TAAAAA-AAAATAAGTCAATA-TTTTTATCAAAGTTAATATTCATTAGATACTGGAATACAAAAATCCTAGTTTATGAAAAGATTTTTTATAAACTACAACTTAGGATATTGTACGATTG-T
gi|4 : GCTTTCAGATTCTATTGAT---GAAGAAA-TAAA-GCAATACTC----TGATTATCAGTGTTCTGTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-TTAA-----TATTTATCAATTTTTGTTTATA---------TATTTATAATTAACTTTCGCTGATTACTCTTAAGTTGCCATTTCAT--AAAATATATAAA------------AATGTATACATTCTTGCTGA-AATTA-A-TAAAC---A----GGTTCTATT---TA------------CTGTTTTATTT-ATTTAAA----------AT-------------TT-CATCAACTAAAACAATAAAGCtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctttcagattctattgatgaagaaataaagcaatactctgattatcagtgttctgtcatttgttttgtttttcatatattccctattaattaatatttatcaatttttgtttatatatttataattaactttcgctgattactcttaagttgccatttcataaaatatataaaaatgtatacattcttgctgaaattaataaacaggttctatttactgttttatttatttaaaatttcatcaactaaaacaataaagcgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : ctaatactatgacaaagtatcaagttcaatgacaaccaataaattaactggataaatagttaccaatatgataaaaataattattcaaattagattaaaaaaaaaaagctataaaaaattacaataattagcaaaacagaccttaagtaattattgtataaactacaggacaagcagtgactaacttgtactaattcccccacacccaccttcacgcggtattgtgtgcaatatgtaaactccagggtttatgataggatgtatgcaacattaaatcattattgttatcaaacgtcctctaattatcgataattagaagttattcagtgagtcaatgacagcggttttaaaataacattgaacattcaattaagcggtctgcaaaccgatgaattgtaatgtcctttgtgcattatgtagatatatgtaaaaaaaaataagtcaatatttttatcaaagttaatattcattagatactggaatacaaaaatcctagtttatgaaaagattttttataaactacaacttaggatattgtacgattgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACTACAGGACACGCAGTGACTGACTTGTACTAAT-CTCCCCACACCCACCTTC-ACTCGACGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCAATATTATTATCACATGTTCTCT----------AATTA--------T----------TGATAATCATAAGTTTTC-ATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGACCTGCATACCGATA------AATGTACTATGTGCTTTATGTAGATATATC-TAAAAA------AAGTGAATA-TTTTTATCAAAATTAATATTCACTAG--------ATACAAAAATCCTAGATTACGAAGAAATTTGATATAAACTGCAACTTAGAAAACTGTATGATTGTTGACAgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : tTATCTATTGAAG--GAATTTTAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCCGTGTTCTATCATTTGTTTTTTTGTTTTTTTTTATATA--TATTCCCTA--TTA-A-TTAA-----TAGTTATCTATTAAT--TTATA---------TATTTATAATTTACTTTCGC------------------CATTTCATTAAAAATAAA-A-A------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AATCCCATT---AA------------CAGTTTTATTT-ATTTT-------------------------------ATAAAGTAAAATAATAAAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgaaggaattttagctttcagattctattgataaagaaataaagcaatactctatccgtgttctatcatttgtttttttgtttttttttatatatattccctattaattaatagttatctattaatttatatatttataatttactttcgccatttcattaaaaataaaaaaatgtatacattctcgctgaaattaataaacaaatcccattaacagttttatttattttataaagtaaaataataaagtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|6 : taactacaggacacgcagtgactgacttgtactaatctccccacacccaccttcactcgacgcggtaatgtgtgcaatatgtaaatatatcactccagggtttatggcaggatgtatgcaacattacatcaatattattatcacatgttctctaattattgataatcataagttttcatgacagcggttttaaaataacattaaacattcaatttaacgacctgcataccgataaatgtactatgtgctttatgtagatatatctaaaaaaagtgaatatttttatcaaaattaatattcactagatacaaaaatcctagattacgaagaaatttgatataaactgcaacttagaaaactgtatgattgttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCGGCACATGAGATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATAACCATCTCCAAGTGCCATTATCTGATACTATGTAGATATA-ATTTAG-AAAATATTTACATAAAACAAATTAGGTCATGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTTAATTATATTAG------------------------CGAAAAAACCGCGTAAATATAATCAGTTATGCCTATATTATGTATATCTGCATTTTTAATAATTTTGCTCATGGGCCTCAACTATC--TAT--ACACTGATTTTGACCAAGAAACTATAGT-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAAAATCGAAGTCCC-TGTTTTAACCCTGAAATTTTGTCTATCACTATCTTTTATtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|7 : atcatTTCAAATTATCTCGAA---AAAAATA-TAAAAGCCATACTC----T----AGCTGCTTTCCATCATTTGTTTT---GTTTTTC-----ATA--TAT---CTT--TTGCA-T--------TATAGACC------------TA---------TATTTATCATTTACTTTTGCTTATTACACTTACGTTACAATTTCATCTAATGTAAA-AAA------------TCTGTATACCTTCTCGCTGA-AAT-----TAAAC---A----AGTTCGAT
gi|7 : TCCTATT---TA------------CTGTTTTATGT-ATTTAAATCGCTGACGAAT-------------TT-CATAAAGTAAAACAA-AAAcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatattcctatttactgttttatgtatttaaatcgctgacgaatttcataaagtaaaacaaaaatatcggagactgtagatatgttacaaaagtattggcaa
gi|8 : ttcaaattatctcgaaaaaaatataaaagccatactctagctgctttccatcatttgttttgtttttcatatatcttttgcattatagacctatatttatcatttacttttgcttattacacttacgttacaatttcatctaatgtaaaaaatctgtataccttctcgctgaaattaaacaagttcgatcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatatATCTATTGA-GTTAAATTTCAGCTTTTAGATTTTATTGAT---AAAAAAAATAAA-GCAATACTC----T----ATCAGTGTTCTATCAT--GTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-TAAA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAATTGCCATCTCATT-AAAATAAG-AAA------------AGTGTATACATTATTGCTGA-AATTA-A-CAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGCtatcggagactgtagatatgttacaaaagtattggcaa
gi|9 : TATCTATTGA-GTTAAATTTCAGTTTTTAGATTCTATTGATTAAAAAAAAA-TAAA-GCAATACTC----T----ATCA-------------TGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AAA----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATCTCATTAAAAAT-AA-AAA------------AGTGTATACATTATCGCTGA-AATTA-A-CAAAC---A----AGTTCTATT---GG------------CTGTTTTATTTAATTTTAA----------CT-------------TT-CATAAAGTAAAACAATAAAGCgaaacaaaataccggaaactgtcaatatgtcaggaaagtctcggcgagt
blockSeqs : . C T A T A G C A AATTTGACCAA T G TTG TCCTTT C NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN A A A A T AAGTA C ATTTTAACAA AA A T T TC ACTCGA . . TG CT AA GATTATCGAT TCGATAATTAG A A T AT T TA T T A T A TT TAA A A TGATT T TTT TTTAT AC TC TAAATTAT GT CTTCGCTGT TT A T A A T TGAATTTGTCCT T T . TTT TCAT AAA TACTCCTATTAA A ATAGCGCTTACGAAT C
blockSeqs : . A A C . . C A A ATTTTGAACAA T . TCA ATCTAT C NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN A T A T . AGATA A TTTTTAAAAC . . A A CT A . . TA TC TA . ACGATAATT . T T AT . A T . G . . TT . . . TG G . . . T ATTAA . . TG A C T A T . . . . . . . . . TCGCTGACGAAT .
blockSeqs : . A T A . . T C . . C . . . . NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT . A . A . AGATA T AAGAAAA . . . A C . . TA . T . A A AT . A A . A . . TT . . . T G . . . . ACTAA . . TG T A A A . . . . . . . . . . AT .
blockSeqs : . A A . T T ATTAAAA . . T T . T . T T . . . . . G . T . . . C G . . . . ATTAA . . TT T A A A . . . . . . . . . . AT .
blockSeqs : . . . . . T . . . T G . . . . ATTAA . . TG T C A A . . . . . . . . . . AT .
blockSeqs : . . . . . T T . . . . ATAAA . . TG T A T A . . . . . . . . . . AT .
blockSeqs : . . . T G . . . . ATAAA . . . . A A . . . . . . . . . . . AT .
blockSeqs : . . . T . . . . . TTAT . . . . . . . . . . . . . . . . . CT .
blockSeqs : . . . T . . . . . CAT . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . .
blockSeqCons : ATTTTAAAA**** T** TT T******** ATTAA*******
originalCons : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAG-A-TTNA--AA--AAAAC--GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-C-CCCCACACCCACCTTC-A-TC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA-A-T-AA-----TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
finalCons : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAGATTTTAAAA----AAAAC--GCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAATT--CCCCACACCCACCTTC-A-TC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTCT--------ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTAATTAA-------TATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): CGATCACATCTATATAGCTATTACATCACATTTCAATAATGCACAAACTGTGTTTAAAAGTATCGGGTTAAAAAATAAACTTCTTTATTCATAGTATTATTCTACATATTCCTATTTACTGTTTTATTTATTTTAAATTTTGTAAAGTAAAACAAAAATACCGGAGACTGTTGATATGTTACGAAAGTATCGGCGAGT
Unaligned ( gi|20 ): ATATTCCTATTAATTGTTTTACTTTAAATTGTGCTGACGATTTTCATATAAGTAAAATAATACAGTGAAA
Unaligned ( gi|21 ): AAGGATTAGCTATGATCTCTCTAATTCCTTGTTTTAAATAGTACTGACAAATTTCATAAAGAAAAACAA
Unaligned ( gi|22 ): AAATATTAAAGCAAGACAAAACTACCGGAGACTGCCGATATAATACGAAAGACTCGACGAGTA
Alignments
lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2222 1 1 7777777777777777 1 3333333333 99999999999999999999999999999999999999999999999999999999999999999999999999999999999 1 1111 2 1 4444444 11 1 2222222 3333333333 5555555555555555555 11 1 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 111111111 11111 111 111111111 222222222222 111111111111 2222222222222222222222222
lowQualScore : 1111 1 1 1 0 0 0 1 1 3 2222222222222222 2 0 444 0 4444444444 2 77777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 1 3 3 6 66666 1 0 0 0 8888 8 8 8 0 1 8 3 1111111 88 3 9999999 11 22 0 5555555555 5555555555555555555 8 0 1 1 0 0 11 8 11 1 8 0 1 0 0 88888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 5 33 777 4 4 333333333 2 777 00000 55 55 111 55 666666666 0 0 33 5 3 0 3 5 8 000000000000 4 4 3 666 8888 666 888888888888 3 6666666666666666666666666 4
lowQualScore : .... . . . . . . . . . ................ . . ... . .......... . ................................................................................... . . . . . ..... . . . . .... . . . . . . . ....... .. . ....... .. .. . .......... ................... . . . . . . .. . .. . . . . . . ................................................................................................................................ . .. ... . . ......... . ... ..... .. .. ... .. ......... . . .. . . . . . . ............ . . . ... .... ... ............ . ......................... .
lowQualScore : 2222 0 0 0 0 0 8 0 0 2 0000000000000000 0 0 888 2 8888888888 5 00000000000000000000000000000000000000000000000000000000000000000000000000000000000 6 0 2 7 7 33333 8 8 6 8 4444 0 0 0 0 0 0 3 7777777 33 3 0000000 00 22 8 0000000000 0000000000000000000 0 8 4 4 8 6 88 0 88 0 0 8 4 8 0 00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 7 44 000 0 0 555555555 5 000 00000 55 55 000 55 000000000 9 7 22 9 2 7 5 7 0 555555555555 4 0 6 444 5555 444 666666666666 6 7777777777777777777777777 0
consensus : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAGATTNNAA-AA-AAAACGCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-TCCCC-ACACCCACCTTC-A-TC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA---ATTAATATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
Reference ( family-648 ) : AGTTGGCACATGAAATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATNACCATCTCCAAGTGCCATTATCTGANACTATGTAGATNTA-TTTCAG-AAAATATTTACATAAAACAAATNAGGTCACGCTAGTTTTGAAANTAAAGATAAAACGTCCTTTTTTAATTATATTAGAGGACTT-ATTT-----G----AACGAAAAACCCGCGTAAATATAATCGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTAACT-TC--T-T--ACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAAAATCGAGGTCCCATGTATTGACCCTGAAATTTAGTCTATCACTATCTTTTATTTAAGAAAAGTATCAGTTAAAACTAGAAATGAAATTGATAATAAGTAAAATAGAAACTAATACTATGACAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTGGATAAATAGTTACCAACATGATAAAAACAATTATTCAAATTAGATTTTAA-AA-AAAACGCTAT-AAAAA-TTACAGTAATTAGCAGAACAGACCTTAAGCAATTATTGTATNAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-TCCCC-ACACCCACCTTC-A-TC--CGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCATTATTATTATCACACGTCCTCT----------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTGCATTATGTAGATATATG-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATGAAGAGATTTGTTATAAACTACAACTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCTATTGA-GTTGAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCAGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA---ATTAATATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|1 : AGTTGGCACATGAAATTGAAATTTATGTTGAAGCATCGAATCAATCCGGCGTTACTGTTATGAATACATTAACATCTCCAAGTGCCATTATCCGAAAGTATGTAGATCTA-TTTCAG-AAAATATTTACATAAAACAAATAAAGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCATTTTTTAATTATACTAGAGGACTT-AT-------------ACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGTATCATTAATAATTTT-CTCATTGTCATTAACT-TC--T-TTTACACTGATTTTGACCAAGGAACTATAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTAACTTTAACAAATATAGCGGTCCCATGTATTGACCCTGAAATTGAGTCTATCACTGTCTTTTATTTAACAAAAGTATCAGTTCAAACTTGAAATGAAATTGATAATACGTTAAATAGAAACTTATACTGTGACAAAGTATCAATTCCAATGACAA-ACCAGAGATGCATTGACAATAAATTAACTGGATAAATATTTCCCAACATGATAAAAACAATAATTCAAATTATAT---------AAAACGCTTT-AAAAA-TTACAGTAATTAAAAGAACAGACCTTAAGCATTTATTGTATTAACTACTGGACAAGCAGTGACTAACATGTACTTAT-CCCCC-ACACCCACCTTCAA-TC--CTCGTAGAAATGTGTGCAATATGTACAATAGCGCTTATCACTCCTGGGTTTATGACAGGATGTATGCAACACTACATCATAATTATTATCACACGGCC-------------AATTA--------T----------AAGTTATT-TAGGGAGTCAATGACAGCGGTTTAAAATTAACATTAAACATTCAATTAAACGGCCTGCAAACCGATAAATTTTAATGTCCTATGTGCATTTTGTAGAAATATG-TAAAAA-GAATTAAGTGATCA-TATTTATCAAAATTAATATTCACAAGATACGGGAATACAAAAAACCTAGTTTATGAATAGATTTGTTGTAAGCTAC-ATTTAGGATATTGTACGATTG-TGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACCTATTGA-G-TGAATTTCAGCTTTCAGATTCTATTGAT---AGAGAAA-T-AA-GCAATACTCTGATT----ATCAGTGTTCTCTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA---TA---A-----ATTTATCTATTCCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTGAGTTGCCATTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCACTGA-AATTA-ATTAAAC---A----AGTTCTATT---AA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGC
gi|10 : ATCAATTGA-GTTAAATTTCAGCTTTCCGATTCCCACAAT---AAAACCA-TAAA-GCAATACTC----TG---GTCA-T-TTCTATCATTTGTTTG---ATTTTTC-----ATAACTATATGCTATCTTA---ATTAAAATTCAACTATTTCT--TT-TACTTCGCTGTTATTTGT-ATTTACTT-------TTACAC--ATGTTACTGTTCTA-TAAAAATAAATGAATGAATTTGTCCTAATGTTTATATTAT--CTAATAATTATA-TATACTTTATCATAGTATTATTAAATATACTCCTATTAACTGTTTCATTT-ATTTTAA----------A
gi|11 : ATTTCAGCTTTCAGATTATATAGAT---AAATAA--TAAA-GCAGTACTC----T----AGCGGGTTTCTCTCATTTGTTTG---GTTGATA-----ATA--TTTTCTTTA--TTATAAATTATTATTTATCTATTTCA--TTACA---------TATTGAGTATTTATTTGCGCTTATTACACATACGTTTCCGTTTAATCTGAAAT-AA-AAG------------TATGTATACCCTCTCGCTAA-AATAA-A-CAAAC---
gi|12 : gtaatAGTTGGCACATGAAATTGAGTTTTATATTCAAGCATAGGATCAGCC----GTTACTGTTATGAATACATCACCATCTCCACGTGCCATTATCTGATACTATGTAGATATATTTTTAGAAAAATATTTACATGAAACAAATGAGGTCACGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTGAATTATATAAGtaatcaaaaaattagatcaaatgtatttacaattcataggcatttttaagtcgaatatatatgttgt
gi|13 : atcCTATT---TA------------TTGTTTTACTT-ATTTTAA----------ATAGCGCTTACGAATTT-CCTAAAGTAATACAATAAAGCcgaaaaaacaactaaaaatac
gi|15 : aaaaaagttcgatcactgatgaaatgattatcgtaatgtgtatcttattttatgattgtatatttcatatttattgtattattctacatattaATTTAACCTGACATCAAGTCTGTCATTATCT---ATTTAGGAAAAGTATCAGTTATTACCAGAAATGAAAATGACAATTAGTAAAATAG------ATAC--TGACAAAATATCTATTTCAAT-ACAATATTAG---T-CATCAACAACAgaaacaatataacggatagtgtcgatatgtttctaatgtttaggcgag
gi|16 : aaacacaagacatccaAATACTATGACAATGTATCAATTTCAATGACAA-ACCAGAAGTAAATAAACAAAAAAATAACTGGATACATAGTTACTAACATGATAAAAACAATTATTTAAATTAGA--AGAA-AA-AAAACGCTAT-ttatatcacaaactaaagacatataacaaattaagtaag
gi|17 : TTG-A-TAAAA---A----AGTTCTATT---TA------------CTGTTTTATTT-ACTTTAA----------AT-------------CG-CATAAAGTAAAACAATAAAGC
gi|18 : -TAAAC---A----AGTTCTATT---TA------------CTGTTTCATTT-ATTTTGA----------AT-------------TTCCAT-AAGTAAAACAATAAAGgaaacaaaataccgtaaactgtcgatatgttatgaaagactcggcgagta
gi|19 : TAACAAAAATCTAGGTCCC-TGTATCGACTATAAAATTTTGTCTATCACAACCTTTTATTTAGGAAAAGTATCAATTTAAagaaacaaaaccctggaaactgtcgatatgttacgaaagtctcggcgagta
gi|2 : AGTTGGCACATGGAATTGAGTTTTATGTTTAAACATCGAATCAATC----GTTATTTTTATGAATACAAAACAATCTCCAAGTGTCATTATATGAAACTATGTAGATCTA-TTTCAG-AAAATATTTACATCAAATAAATCAGGTCACGCTAGTTTTGAAAATAAAGATAAAACGTCCTTTTTTATTAATATTAGAGGACTTAATTT-----GACCAAACGAAAAACCCGCGTAAATATAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTAATAATTTT-CTCATTGTCATTGATT-TCCTT-T--ACACTGATTTTGACAAAGGAACTTTAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAA-AAAGATAAAGGTCCCATGTATTGACCTTGAAATTTAGTCTATCTTTATCTTTTATTTAAGAAAAGTATCAGTTAAATCTAGAAATAAAATTGATAATAAGTAAAATAGAAACTTATTCTATGAAAAAGTAACAATTTCAATGACAA-ACCAGAGATACAGTAACAATAAATTAACTGGATAAATAGTTACCAAC--------AACAATTATTCAAATAAGATTTTAACAA-AAAACGCTATAAAAAA-ATACAGTAATTAGCAGAACAGACCTTAAGCAATTATTATATTAACTAAATGACAAGCAGTGACCAATTTGTACTAAT-CC
gi|2 : tcTG-----TACTAATCCAGGGTTTATGGCAGGATGTATGCAACATTACATAATT--TATTACCACACGTACTCT----------AATTAACGATAATT----------AAGTTATT-TATGGAGTCAACGACAGCAGTTTTAAAATAACATTAAACATTCAATTAAACGGCCTGCATACCGATAAATTTTAATGTCCTATGTTCATTATGTAGATATATGTTAAAAATAAATTAAATGAACATTTTTTATCAAAATTGATATTCACTAGATACGGGAATGCAAAAATCCTAGTTTATGAGAAGATTTGTTATAAAATACAACTTACGATATTGTACGATTG-Tagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|2 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaattTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----C----ATCAGTGTTCTATCATTTGTTAT---GTTT---------------TTCCCTA--TTA---ACTAAAATTTATCTATTTAT--TTATA---------TATTTATAATTTAC--------------------------TTTCATTAAAAATAAA-AAA------------AATGTATACATTCTCGtcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatactccatcagtgttctatcatttgttatgtttttccctattaactaaaatttatctatttatttatatatttataatttactttcattaaaaataaaaaaaatgtatacattctcg
gi|23 : tcagttggcacatggaattgagttttatgtttaaacatcgaatcaatcgttatttttatgaatacaaaacaatctccaagtgtcattatatgaaactatgtagatctatttcagaaaatatttacatcaaataaatcaggtcacgctagttttgaaaataaagataaaacgtccttttttattaatattagaggacttaatttgaccaaacgaaaaacccgcgtaaatataattgaatatgcctatattatgtgtgtctgcatctttaataattttctcattgtcattgatttcctttacactgattttgacaaaggaactttagtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaaaagataaaggtcccatgtattgaccttgaaatttagtctatctttatcttttatttaagaaaagtatcagttaaatctagaaataaaattgataataagtaaaatagaaacttattctatgaaaaagtaacaatttcaatgacaaaccagagatacagtaacaataaattaactggataaatagttaccaacaacaattattcaaataagattttaacaaaaaacgctataaaaaaatacagtaattagcagaacagaccttaagcaattattatattaactaaatgacaagcagtgaccaatttgtactaatccagggtttatggcaggatgtatgcaacattacataatttattaccacacgtactctaattaacgataattaagttatttatggagtcaacgacagcagttttaaaataacattaaacattcaattaaacggcctgcataccgataaattttaatgtcctatgttcattatgtagatatatgttaaaaataaattaaatgaacattttttatcaaaattgatattcactagatacgggaatgcaaaaatcctagtttatgagaagatttgttataaaatacaacttacgatattgtacgattgttcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAGTTGGCTCATGGAATTGAGTTTTATGTTCAAGCGT
gi|3 : gatcAGATAAAACGTCCTTTCTTAATTATATTTGAGGACTT-ATTTTGAACA----AACGAAACACTCACGTAAATACAATTGAATATGCCTATATTATGTGTGTCTGCATCTTTATTAATTTT-CTCATTGTCA------------------A-TGATTTTGACCAAGGAACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT-------AACACAAATCGAGGTCCGATGTATTGACCCTGAAACTTAGTCTATCACTAGCTTTTATCTAAGAAAAGTATCAGTTAAAATTAGAAATGAAATTAATCATAAGTAAAATAGAAACTAATACTAAGTCAAAGTATCAATTTCAATGACAA-ACCAGAGATACATTAACAATAAATTAACTAGATAAATAGTTACCAACATGATACAAAAAA-TATTCAAACTAGTTTTTAA-AACAAAACGCTAT-AAACATTTACAGTAATTAGCAGAGCAGACCTTAAGCAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAAC-TCCt
gi|3 : ACTCCATGGTTTATGGCAGGATGTATACAACATTACATCATAATTATTATCACACGTCCTCTGATTATCGATAATTA--------T----------AAGTTATT-TAGGGAGACAATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGGCCTGCATACCGATAAATTTTAATGTTCTATGTGCATTATGTAG------G-TAAAAA-AAATTAAGTGAACA-TTTTTATCAAAATTAATATTCACTAGATACGGGAATACAAAAATCCTAGTTTATTAAGTGACTTGTTATAAACTACAACTTAGGATATTGTACGATTatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|3 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaTATCTATTGA-GT-GAATTTCAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACAC----T----ATCCGTGTTCTATCATTTGTTTT---GTTTTTC-----ATA--TATTCCTTA--TTT---ATTATTATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACATAAGTTGCCATTTTATTAAAAGT-AA-AAC------------TTTGTAAACATTCTCGCTGA-AATTA-A-TAAAC---A----AGTTCTATT---TA------------CCGTTTTATTT-ATTTTGA----------AT-------------TT-CATAAAGTAAAA-AATAAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgagtgaatttcagctttcagattctattgataaagaaataaagcaatacactatccgtgttctatcatttgttttgtttttcatatattccttatttattattatttatctatttctttatatatttataatttactttcgctgattacacataagttgccattttattaaaagtaaaactttgtaaacattctcgctgaaattaataaacaagttctatttaccgttttatttattttgaatttcataaagtaaaaaataa
gi|4 : agataaaacgtcctttcttaattatatttgaggacttattttgaacaaacgaaacactcacgtaaatacaattgaatatgcctatattatgtgtgtctgcatctttattaattttctcattgtcaatgattttgaccaaggaactatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaacacaaatcgaggtccgatgtattgaccctgaaacttagtctatcactagcttttatctaagaaaagtatcagttaaaattagaaatgaaattaatcataagtaaaatagaaactaatactaagtcaaagtatcaatttcaatgacaaaccagagatacattaacaataaattaactagataaatagttaccaacatgatacaaaaaatattcaaactagtttttaaaacaaaacgctataaacatttacagtaattagcagagcagaccttaagcaattattgtataaactacaggacaagcagtgactaacttgtactaactccatggtttatggcaggatgtatacaacattacatcataattattatcacacgtcctctgattatcgataattataagttatttagggagacaatgacagcggttttaaaataacattaaacattcaatttaacggcctgcataccgataaattttaatgttctatgtgcattatgtaggtaaaaaaaattaagtgaacatttttatcaaaattaatattcactagatacgggaatacaaaaatcctagtttattaagtgacttgttataaactacaacttaggatattgtacgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCTAATACTATGACAAAGTATCAAGTTCAATGACAA-----------C-----CAATAAATTAACTGGATAAATAGTTACCAATATGATAAAAATAATTATTCAAATTAGATTAAAA-AA-AAAAAGCTAT-AAAAAATTACAATAATTAGCAAAACAGACCTTAAGTAATTATTGTATAAACTACAGGACAAGCAGTGACTAACTTGTACTAAT-TCCCCCACACCCACCTTC-A-----CGCG--GTATTGTGTGCAATATGTA-AA------------CTCCAGGGTTTATGATAGGATGTATGCAACATTAAATCATTATTGTTATCAAACGTCCTCT----------AATTA--------TCGATAATTAGAAGTTATT-CAGTGAGTCAATGACAGCGGTTTTAAAATAACATTGAACATTCAATTAAGCGGTCTGCAAACCGATGAATTGTAATGTCCTTTGTGCATTATGTAGATATATG-TAAAAA-AAAATAAGTCAATA-TTTTTATCAAAGTTAATATTCATTAGATACTGGAATACAAAAATCCTAGTTTATGAAAAGATTTTTTATAAACTACAACTTAGGATATTGTACGATTG-T
gi|4 : GCTTTCAGATTCTATTGAT---GAAGAAA-TAAA-GCAATACTC----TGATTATCAGTGTTCTGTCATTTGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA---ATTAATATTTATCAATTTTTGTTTATA---------TATTTATAATTAACTTTCGCTGATTACTCTTAAGTTGCCATTTCAT--AAAATATATAAA------------AATGTATACATTCTTGCTGA-AATTA-A-TAAAC---A----GGTTCTATT---TA------------CTGTTTTATTT-ATTTAAA----------AT-------------TT-CATCAACTAAAACAATAAAGCtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngctttcagattctattgatgaagaaataaagcaatactctgattatcagtgttctgtcatttgttttgtttttcatatattccctattaattaatatttatcaatttttgtttatatatttataattaactttcgctgattactcttaagttgccatttcataaaatatataaaaatgtatacattcttgctgaaattaataaacaggttctatttactgttttatttatttaaaatttcatcaactaaaacaataaagcgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : ctaatactatgacaaagtatcaagttcaatgacaaccaataaattaactggataaatagttaccaatatgataaaaataattattcaaattagattaaaaaaaaaaagctataaaaaattacaataattagcaaaacagaccttaagtaattattgtataaactacaggacaagcagtgactaacttgtactaattcccccacacccaccttcacgcggtattgtgtgcaatatgtaaactccagggtttatgataggatgtatgcaacattaaatcattattgttatcaaacgtcctctaattatcgataattagaagttattcagtgagtcaatgacagcggttttaaaataacattgaacattcaattaagcggtctgcaaaccgatgaattgtaatgtcctttgtgcattatgtagatatatgtaaaaaaaaataagtcaatatttttatcaaagttaatattcattagatactggaatacaaaaatcctagtttatgaaaagattttttataaactacaacttaggatattgtacgattgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACTACAGGACACGCAGTGACTGACTTGTACTAATCTCCCC-ACACCCACCTTC-ACTCGACGCG--GTAATGTGTGCAATATGTA-AATA-----TATCACTCCAGGGTTTATGGCAGGATGTATGCAACATTACATCAATATTATTATCACATGTTCTCT----------AATTA--------T----------TGATAATCATAAGTTTTC-ATGACAGCGGTTTTAAAATAACATTAAACATTCAATTTAACGACCTGCATACCGATA------AATGTACTATGTGCTTTATGTAGATATATC-TAAAAA------AAGTGAATA-TTTTTATCAAAATTAATATTCACTAG--------ATACAAAAATCCTAGATTACGAAGAAATTTGATATAAACTGCAACTTAGAAAACTGTATGATTGTTGACAgaaacaaaataccggaaactgcctatatgttacgaaagtctcggc
gi|5 : tTATCTATTGAAG--GAATTTTAGCTTTCAGATTCTATTGAT---AAAGAAA-TAAA-GCAATACTC----T----ATCCGTGTTCTATCATTTGTTTTTTTGTTTTTTTTTATATA--TATTCCCTA--TTA---ATTAATAGTTATCTATTAAT--TTATA---------TATTTATAATTTACTTTCGC------------------CATTTCATTAAAAATAAA-A-A------------AATGTATACATTCTCGCTGA-AATTA-A-TAAAC---A----AATCCCATT---AA------------CAGTTTTATTT-ATTTT-------------------------------ATAAAGTAAAATAATAAAGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntatctattgaaggaattttagctttcagattctattgataaagaaataaagcaatactctatccgtgttctatcatttgtttttttgtttttttttatatatattccctattaattaatagttatctattaatttatatatttataatttactttcgccatttcattaaaaataaaaaaatgtatacattctcgctgaaattaataaacaaatcccattaacagttttatttattttataaagtaaaataataaagtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|6 : taactacaggacacgcagtgactgacttgtactaatctccccacacccaccttcactcgacgcggtaatgtgtgcaatatgtaaatatatcactccagggtttatggcaggatgtatgcaacattacatcaatattattatcacatgttctctaattattgataatcataagttttcatgacagcggttttaaaataacattaaacattcaatttaacgacctgcataccgataaatgtactatgtgctttatgtagatatatctaaaaaaagtgaatatttttatcaaaattaatattcactagatacaaaaatcctagattacgaagaaatttgatataaactgcaacttagaaaactgtatgattgttgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTCGGCACATGAGATTGAGTTTTATGTTCAAGCATCGGATCAGTC----GTTACTGTTATGAATACATAACCATCTCCAAGTGCCATTATCTGATACTATGTAGATATA-ATTTAG-AAAATATTTACATAAAACAAATTAGGTCATGCTAGTTTTGAAACTAAAGATAAAACGTCCTTTTTTAATTATATTAG------------------------CGAAAAAACCGCGTAAATATAATCAGTTATGCCTATATTATGTATATCTGCATTTTTAATAATTTTGCTCATGGGCCTCAACTATC--TAT--ACACTGATTTTGACCAAGAAACTATAGT-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACAAAAATCGAAGTCCC-TGTTTTAACCCTGAAATTTTGTCTATCACTATCTTTTATtgaaacaaaataccggaaactgttacgaaagtctcggcgagt
gi|7 : atcatTTCAAATTATCTCGAA---AAAAATA-TAAAAGCCATACTC----T----AGCTGCTTTCCATCATTTGTTTT---GTTTTTC-----ATA--TAT---CTT--TTGC--ATT-ATA--GACC------------TA---------TATTTATCATTTACTTTTGCTTATTACACTTACGTTACAATTTCATCTAATGTAAA-AAA------------TCTGTATACCTTCTCGCTGA-AAT-----TAAAC---A----AGTTCGAT
gi|7 : TCCTATT---TA------------CTGTTTTATGT-ATTTAAATCGCTGACGAAT-------------TT-CATAAAGTAAAACAA-AAAcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatattcctatttactgttttatgtatttaaatcgctgacgaatttcataaagtaaaacaaaaatatcggagactgtagatatgttacaaaagtattggcaa
gi|8 : ttcaaattatctcgaaaaaaatataaaagccatactctagctgctttccatcatttgttttgtttttcatatatcttttgcattatagacctatatttatcatttacttttgcttattacacttacgttacaatttcatctaatgtaaaaaatctgtataccttctcgctgaaattaaacaagttcgatcaaatggatataccattcatatcaatttctcgtaatgcatatattgtcatatcattatatatttctttattcatagtattattttacatatATCTATTGA-GTTAAATTTCAGCTTTTAGATTTTATTGAT---AAAAAAAATAAA-GCAATACTC----T----ATCAGTGTTCTATCAT--GTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA---ATAAATATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAATTGCCATCTCATT-AAAATAAG-AAA------------AGTGTATACATTATTGCTGA-AATTA-A-CAAAC---A----AGTTCTATT---TA------------CTGTTTTATTT-ATTTTAA----------AT-------------TT-CATAAAGTAAAACAATAAAGCtatcggagactgtagatatgttacaaaagtattggcaa
gi|9 : TATCTATTGA-GTTAAATTTCAGTTTTTAGATTCTATTGATTAAAAAAAAA-TAAA-GCAATACTC----T----ATCA-------------TGTTTT---GTTTTTC-----ATA--TATTCCCTA--TTA---ATAAATATTTATCTATTTCT--TTATA---------TATTTATAATTTACTTTCGCTGATTACACTTAAGTTGCCATCTCATTAAAAAT-AA-AAA------------AGTGTATACATTATCGCTGA-AATTA-A-CAAAC---A----AGTTCTATT---GG------------CTGTTTTATTTAATTTTAA----------CT-------------TT-CATAAAGTAAAACAATAAAGCgaaacaaaataccggaaactgtcaatatgtcaggaaagtctcggcgagt
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|14 ): CGATCACATCTATATAGCTATTACATCACATTTCAATAATGCACAAACTGTGTTTAAAAGTATCGGGTTAAAAAATAAACTTCTTTATTCATAGTATTATTCTACATATTCCTATTTACTGTTTTATTTATTTTAAATTTTGTAAAGTAAAACAAAAATACCGGAGACTGTTGATATGTTACGAAAGTATCGGCGAGT
Unaligned ( gi|20 ): ATATTCCTATTAATTGTTTTACTTTAAATTGTGCTGACGATTTTCATATAAGTAAAATAATACAGTGAAA
Unaligned ( gi|21 ): AAGGATTAGCTATGATCTCTCTAATTCCTTGTTTTAAATAGTACTGACAAATTTCATAAAGAAAAACAA
Unaligned ( gi|22 ): AAATATTAAAGCAAGACAAAACTACCGGAGACTGCCGATATAATACGAAAGACTCGACGAGTA