lowQualScore : 11111111111111111111111111111111111111111
lowQualScore : 1 111111 1 11111111111111111111111111111111111111111 1 11111 2222 1 111111 111 333333 111111 1 11111
lowQualScore : 4 3 888888 0 33333333333333333333333333333333333333333 1 5 7 1 00000 6666 3 2 5 2 7 2 000000 4444 555 44 3 666 1 7 4 555 3 777777 3 666666 3 1 66666 1 8
lowQualScore : . . ...... . ......................................... . . . . ..... .... . . . . . . ...... .... ... .. . ... . . . ... . ...... . ...... . . ..... . .
lowQualScore : 0 3 000000 9 00000000000000000000000000000000000000000 3 6 6 3 55555 0000 1 4 8 9 9 9 555555 8888 999 66 3 000 0 2 8 888 3 555555 6 555555 4 9 77777 0 8
consensus : NNNTCCNG-GTCAA--CGT-TGGTGTTTAGGGGCTAGG---GATAA-------------G--G-TAA------G-----GGTTAGGAATAGAAGGAAAACCTCNT-A-AAC-C-GT-TGATTTAGG-GGCTATAA-ATCG---GTTTA-TG-GG-C-TTA--A-A-AATGAGTGAAAANTACT---GC-TTG-AA-A-A-AAAT-C---CCTTAAACCCAAAATGTTGGAACGT-----CCGTCCGTCCGT
Reference ( gi|5 ) : CCATCCTG-GTCAA--CTT-TGGCGTTTAGGGGCTAGG---GATAA------------GG-GGATAA------G-----GGTTAGGAATAAAAAGAAAACCTCTT-A-AACAC-AT-TGATGTATG-GCCTATAA-ACCG---GTTTA-TG-GG-T-TTA--A-A-AGTGAATGAAAAATATT---GC-TTG-AA-ATA-AAAT-C---TTTTAAACCCAAAATGGTGGAACGT-----CCATCCGTTCGT
gi|19 : TCCAG-GTAAATACTT-TGG-GTTTAGGGGCTAAGCTAAAGAA------------TG-TGGTAA------GAATCTGGTT-GGAGTAAAAA
gi|13 : tctgCTGTGTCAA--CAT--GGTGATTAGGGGCTAGG-----TAC------------TG-GG-----------------GTTAAGATTATAAGGAAA-CTTCAT-A-AAACC-ATATAGTTTGGG-GCTT-TAA-ATGA---GATTG-TG-GG-C-TTA--A-A-AATGAATGAAAAATACT---GC-TTG-AA-A-A-ACACACGCACTTAAAACTCGAAATGTTGttattaccaggtcttacagtaccttgtctttttaggggccaatttgtgttgcat
gi|2 : -GTCCA--TGT-TGGTGTTTAGTGGCTAGG---GGCAACGGCTAGGAGCTAG-GGATAA------G-----GTTAAGGAATAGGAGGAAA-CCACCT-ACAAC-C-AT-TGATTTAGG-GGCAATAA-ATCG---GTTTA-TA-GG-C-TTA--A-A-ATTGAGTGAAAAGTACTGCAGC-TTG-A----A-AAAT-C---CCTTTAACCAAAAATGTTAGAACGT-----CCGGCCGTCCGT
gi|10 : cTCAA--CATATGGTGATGAGAAGCTAGG-----TAA------------------TA-------G-----GGTTGAGAATAGAAGGAAA-CCTCGT-GTAAC-C-GT-CGCCTAAGG-GACCATTA-ATCT---GTTTG-TC-GG-C-TTATAATA-AGAGAG-AAAAAATACT---GC-TTT-A----A-AAAT-C---ACTT-AACCCAGA
gi|8 : tgtgtgtgaaCAA--CATATGGTGTTTAGGGGCTAGA---GAT--------------------T-T------G-----GGTTAGGAATAGAATG-AAACCTCCCAA-AACA--AT-TGATTTAGA-GGCTATTA-A----------A-AG-AG-TATCA--A-A-A--GAGTGAAAATTACT---GC-TTA------A-AAAT-C---CTTAAAACCTAAAACGTTTGAACGTAGTGACCGTCTGTCCGTgatattaaaacaa
gi|14 : gtccatgaggac-TGGTTTTTAGGGGCTAGG-------A------------G-----TTA------G-----TGTTATGAATAGGAGAAAAACGTCTT-T-AATTT-GT-CGATGTAGG-GACTATAA-ACCG---GGCTA-TT-AA-C-TTA--A-ATACTGTATGAAAA--ACC---GC-TTA-AACATG-AAGT-G---TT
gi|20 : cgtttgttcgtttctccgagccatctata-TGGTGTTTATGGGCT--------TA----------------TGATTA------T-----GGTAAGGAATAGAA-GAAAACC-------------AT-TGATTTAGG-GGCTATAAGATTA---GTTTA-AG-GG-T-TTA--A-C-TATGAGTGGAAATAACT---GC-T
gi|18 : aatataGGGCTAGG---GAT--------------------TAA------T-----G-TTAGGAATAGAC-GTAAACCTCAT-A-AAACC-AT-TGATTTATGTGCTT-TGA-ATC-------------GG-T-TTA--A-A-AATGAGGGTAAATTACT---GC-TTG----ATA-AAGT-C---CTTC-AATCCAAATTGTTGGAACAC-----CCGTACGT
gi|15 : tgatGGGTTAAC---AATAG------------GGTGGTTAAACTTTTG-----GGTT--TAATAGAAAGAAA-CCTCAT-A-AACA--GT-CGATTTATA-GGCTATAA-ATTG---GTTTA-TG-AG-T-TTA--A-A-A-TAAGTGCAAATTACT---GC-ATGAAA-ATACACA---------TAAA-CCAGATTTGTGGAA
gi|11 : atctgtctTAG------G-----GGTTAGGATTAGAAAGAAACCTTCTA-A-AAC-C-AT-TGATCTAGC-GGGTATAA-ATCG---GGATA-TG-GGCT-TTA--A-A---TGGATAAAAAATACT---GC-TTG-A----A-AAGT-T---CCTCAAAAACAAAATGTTGGGACGT-----CCGTCCGTACGTaccat
gi|12 : ccgtccgggccaacatatggtgtg------G-----AGTTATGAATAGAAGGAAACCTTCTA-A-AAC-C-AT-TGATTTTTG-CGCTATAC-ATCG---GTTTA--------------A-A-AATGAGTGAAAAAAACT---GC-TTG-AA-AAA-AAAT-C----TTTAAACCCAAAATGTTGAAACAC-----CCATCCGTCCGT
gi|23 : gtccgggccaatatatgggctacgattcAAGGAAACCTCCT-A-AA-ACTGT-TGATTTATG-AGCTATAA-ATTT---GTTTAATG-AG-C-T-A--A-A-AATGAGTGGAAATTACT---GC-TTG------A-AAATGC---TCTTAAACCCAAAc
gi|15 : gAAACTCAT-A-AAC-C-A----ATTTATA-GCCTATAA-ATCGACTGTTTA-TGAGG-T-TT
gi|3 : atctgtctgggttaacaatagggtggttaaacttttgggtttaatagaaagCCTCTT-G-GACA---T-TCATATTGG-GGCTA-AA-ATCA---ATTTA-TG-GG-C-TTA--A-A-A-TATATTACCAAT-TT---GTGTTG-CA-AGA-AA---C---TCGTAAACTCGTAATGTTAGAACAT-----CCATCCATaaaataagtgcaaattactgcatgaaaatacacataaaccagatttgtggaaaccat
gi|2 : catccatccgtaagagtaaatatttgagtgaaggagtaatggattatgatcagaaactagttcaaataggaataattg-GCCTATAA-ACCG---ATTTA-Tc
15 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|1 ): TCTACCTGCCTGCCCGCACGTCTGTCTGTCTGTCTGTCCGTACGTGGGAATATTTGGGATTTAGGAGCTAACAATTGGAGGAAGAAATTGATATCAATATAAATTATTGTCTATTAAAACTTCAGTTTTGGGGCTATTCTGTTTTATTCAGTTTATGAGATATAAACTGGTACCTATTTGCGTTGCAAGAGGCTCCTAAAGCCAAAATATTCGATCGTCCGTCGT
Unaligned ( gi|4 ): TCTGACCAGGAAAATTATTTGGGGTTTAGGGGCTAAAGATTAGGGTTAAAAATTGCTTTAAATATGAATGATTGCCTCTTAAACCCTCTATTTTAGGGGCTAAAAATTAAGTTGTATGTTGAAACGGTGGTACCAGTTTGCACTGCAAGAATTTTCAAAAACCAAAATATTAGACAATCTGTGTGTC
Unaligned ( gi|6 ): TCCAAGCAAATATTTGGATTTAAGTGGCTAAGGTTTAGATTTAGAAACTGGTAGGAATGTGTATGATTGCATTTTAAAGTTCATTTTTGGGTTAGGGCCAAAAATCAAATGATGATCTTAAAAAATGTTCCAATATGTGTTATCAGATGCTTCTAAACCCAAACTATTCTAACTTTAGTCCATCTG
Unaligned ( gi|7 ): CAATATGAGCATATATTTTAGATTTAAGATCTAGTGATTAGAGTTAAATTCTACAGTAGTTGGAGTATGGAAGATTGCTTCTTAAACTTTTGGTTTTAGGATCTTAAAATTAGTTTTTAACCCATAAAAGGGGGTACCATTTCGTGTTGCAAGAAGCTCATGAATCTTAAATAT
Unaligned ( gi|9 ): TCAACCTCTCTGTCCATCCCACTGTCTTTCTGTCTGACCAAAGATTCGGAGTTATGGGTCTAAGAATCACAGATAGAATTTCATACCAGTATAAATGTCTGTCTCCTGAATTTCATTTTATTTTCTAAAATCATTTCATAAGCTGGAACCAGTTTATATTGCAAGAATCTCC
Unaligned ( gi|16 ): GAAATCACTATTTTGAGTTTAGGGGTTATAGATTATAGGGGTTAAATCATGTTCATGTATGATTTGCTTCTTACAGTCTTTATTTCAGGGGCCAATTAAAGGTCAGTTTATGAGTGAAAGGAAATTGTACTACTGTGTGTTGTACGATTCT
Unaligned ( gi|17 ): TTCATCTGTCTGTCAGAGCAAACCTTTGTGGTTAAAGGGCAAAAAGGATTAGGGCTAGATTTTATTTAGAATATAAATCATTGTCTCATAAACATTTTGGGGGCTAAAAATCCGTTTATAACCTAAAAAATTAGTTTCAGTTTGTGTTGC
Unaligned ( gi|21 ): TTCTATTGTAGGGTTAACAGTTCATTTATGAGCTGAGAAATGGTAACAATGTGTGTTACAAGAAGTTCCTGAACTCATGTTATTACAATATCCATCCTTAAGTCCATTT
Unaligned ( gi|22 ): AAGAGAAGAAGCCTTAAGTTAAGCTATGGATAAGGATAACAAACTGGTAAGAATATGAAAGATTGTCTTTCAAACATTTGTTTTAGGGCTAAAATCAGTTT
Unaligned ( gi|24 ): GGCCAGGGATTAGGGTTACAGATGGGTTGGAACATGAATGATCGATTCTTAAACCTTCGTTTTAAAATGAGCTTAAAGTATAGTATCTGTATGT
Unaligned ( gi|25 ): TTAAAATCTGAATAATTGTCAGTTAAATCTTCGCTTTAGTGCCCTAAAACAGCTCATGAGCTTAAATTCTATTACCAATTTGTGT
Unaligned ( gi|26 ): GGGTTAAAGTCAGTTTGAGCAAAGAAGAGAATTTGTGTTGCAAGAAGCTCCTGAACCCCAAATATTAGATCATTCGTCCATCTA
Unaligned ( gi|27 ): ATTCATCTGTCTGTCCATGTGTCGATCTGTCTATCCATCTGTCCGAGTGAACCATTTGTGTTTAGGAGCTAAC
Unaligned ( gi|28 ): GGCTGAAAATCAGTTCATGAGCTAATATACTGAAACCAGTATGTGTTGCCAGA
Unaligned ( gi|29 ): TTTATGGGCTAAGGATTAGGGTTAGAATATGAATGCCTGCCTCTTAA
Alignments
lowQualScore : 1 6666666666666666666666666666666666 1111 1111 111 111111 11111 11111
lowQualScore : 1 4 3 9999999999999999999999999999999999 0 6666 5 4 2 3333 1 555 4 0000 2 2 0 7777777 2 33 2 2 2 0 77 2 2 55 3 000 2 999999 3 22222 0 3 3 3 11111
lowQualScore : . . . .................................. . .... . . . .... . ... . .... . . . ....... . .. . . . . .. . . .. . ... . ...... . ..... . . . . .....
lowQualScore : 0 8 3 5555555555555555555555555555555555 8 5555 7 1 7 9999 8 111 7 7777 4 4 3 6666666 4 99 4 5 2 2 33 5 5 55 6 000 7 444444 1 11111 7 1 1 3 11111
consensus : NNNTCCNGGTCAACAT-TGGTGTTTAGGGGCTAGGGATAA---------------GG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GT-CGATTT-AGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
Reference ( family-482 ) : NNNTCCNGGTCAACGT-TGGTGTTTAGGGGCTAGGGATAA---------------GG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GT-TGATTT-AGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
gi|1 : CTATT-A-AA-A-C-TT-CAGTTT-TGGGGCTATTCTGTTTTA-TTC-AGTT-TA-TGAGATAT-AA-A-CTG-GT----ACCTATTT--GCGTTGCA----A-GAGGC---TCCT--AAAGCCA-AAATAT-TCGATCGT-----CCGTC
gi|10 : tctacctgcctgcccgcacgtctgtctgtctgtctgtccgtacgtgggaatatttgggatttaggagctaacaattggaggaagaaattgatatcaatataaattattgtTCAACATATGGTGATGAGAAGCTAGG--TAA--------------------TA-------GGGTTGA----GAATA-GAAGG-A-AA---CCTCGT-GTAA-C-C-GT-CGCCTA-AGGGACCATT-------A-ATC-TGTT-TG-TCGGCTTATAA-T-AAGAGAGAAAAAATACT---GC-TTT------A-AAAAT---CACTT--AACCCAGAGATAT-TAAAACgt
gi|11 : tgtgtgtgaaTCCGGGCCAACATATGGTGT---------------------------------G---TAG------GGGTTAG----GATTA-GAAAGAA-AC---CTTCTA-A-AA-C-C-AT-TGATCT-AGCGGGTATA-------A-ATC-GGGA-TA-TGGGCTT--TA-A-ATGGATA-AAAAATACT---GC-TTG------A-AAAGT---TCCTC-AAAAACA-AAATGT-TGGGACGT-----CCGTCCGTACGTaa
gi|12 : ccg------GAGTTAT----GAATA-GAAGGAA-AC---CTTCTA-A-AA-C-C-AT-TGATTT-TTGCGCTATA-------C-ATC-GGTT-TA----------AA-A-ATGAGTG-AAAAAAACT---GC-TTGAA----A-AAAAA---TCTTT-AAACCCA-AAATGT-TGAAACAC-----CCATCCGTCCGT
gi|13 : gtccgggccaatatatgggctacgattcGTCAACAT--GGTGATTAGGGGCTAGG--TAC---------------TG------------GGGTTAA----GATTA-TAAGGAA-A----CTTCAT-A-AAAC-C-ATATAGTTT--GGGGCTTTA-------A-ATG-AGAT-TG-TGGGCTTA-AA-A-ATGAATG-AAAAATACT---GC-TTGAA----A-AACACACGCACTTAAAACTCG-AAATGT-TGc
gi|14 : ctgt-TGGTTTTTAGGGGCTAGGA--------------------G---TTA------GTGTTAT----GAATA-GGAGAAA-AA---CGTCTT-T-AA-T-TTGT-CGATGT-AGGGACTATA-------A-ACC-GGGC-TA-TTAACTTA-AATA-CTGTATG-AAAA--ACC---GC-TTAAA----
gi|15 : cgtttgttcgtttctccgagccatctata------GGGTT------TAATA-GAAAGAA-A----CCTCAT-A-AA-C-A-GT-CGATTT-ATAGGCTATA-------A-ATT-GGTT-TA-TGAGTTT--AA-A-ATAAGTG-CAAATTACT---GC-ATGAA----A-ATA-----CACAT-AAACC---AGATTTGTGGAAcatgaagtgtt
gi|17 : atctgtctgggttaacaatagggtggttaaacttttCTCAT-A-AA-C---AT-T---TT-GGGGGCTAAA-------A-ATC-CGTT-TA-TAACCTAA-AA-A-ATTAGTaccat
gi|18 : ttcatctgtctgtcagagcaaacctttgtggttaaagggcaaaaaggattagggctagattttatttagaatataaatcattgtGGGCTAGGGAT----------------------TAA------TG-TTAG----GAATA-GACGT-A-AA---CCTCATAA-AA-C-C-AT-TGATTT-ATGTGCTTTG-------A-ATC-GGT----------TTA-AA-A-ATGAGGG-TAAATTACT---GC-TTGAT----A-AAG-----TCCTT-CAATCCA-AATTGT-TGGAACAC-----CCGTACGTttcagtttgtgttgc
gi|2 : tgatGTCCATGT-TGGTGTTTAGTGGCTAGGGGCAACGGCTAGGAGCTAGGGA---TAA------GGTTAAG----GAATA-GGAGG-A-AA---CCACCT-ACAA-C-C-AT-TGATTT-AGGGGCAATA-------A-ATC-GGTT-TA-TAGGCTTA-AA-A-TTGAGTG-AAAAGTACTGCAGC-TTG------A-AAAAT---CCCTT-TAACCAA-AAATGT-TAGAACGT-----CCGGCCGTCCGT
gi|20 : c-TGGTGTTTATGGGCT-----TAT---------------GA---TTA------TGGTAAG----GAATA-GAAGAAA-A----------------C-C-AT-TGATTT-AGGGGCTATA-------AGATT-AGTT-TA-AGGGTTTA-AC-T-ATGAGTG-GAAATAACT---GC-T
gi|22 : aatataGCTATGGATAA---------------GGA--TAACAAACTGG--TAA----GAATATGAAAGAT-TG---TCTTTC-A-AA-C-A-TT-TGTTTT-A-GGGCTA-A-------A-ATC-AGTT-T
gi|23 : aagagaagaagccttaagttaa-GAAGGAA-A----CCTCCT-A-AAAC-T-GT-TGATTT-ATGAGCTATA-------A-ATT-TGTT-TAATGAGCT-A-AA-A-ATGAGTG-GAAATTACT---GC-TTG--------AAAATG--CTCTT-AAACCCA-AA
gi|3 : AGGAATAATTGCCTCTT-G-GA-C---AT-TCATAT-TGGGGCTA-A-------A-ATC-AATT-TA-TGGGCTTA-AA-ATAT-ATTA-CCAATTTGT---G--TTGCA----A-GAAA----CTCGT-AAACTCG-TAATGT-TAGAACAT-----CCATCCATC
gi|4 : catccatccgtaagagtaaatatttgagtgaaggagtaatggattatgatcagaaactagttcaaatT-TGGGGTTTAGGGGCTAAAGATTA---------------GGGT-TAA------AAATT-GCTTTAAATATGAATGAT-TG---CCTCTT-A-AA-C-C-CT-CTATTTTAGGGGCTAAA-------A-ATTAAGTTGTA-TG---TT--GA-A-ACG-GTG-----GTACCA--GT-TTGCACTGCA-AGAAT---TTTCA-AAAACCA-AAATAT-TAGACAAT-----CTGTGTGTC
gi|5 : tctgaccaggaaaattatTCCTGGTCAACTT-TGGCGTTTAGGGGCTAGGGATAA---------------GGGGATAA------GGGTTAG----GAATA-AAAAGAA-AA---CCTCTT-A-AA-CAC-AT-TGATGT-ATGGCCTATA-------A-ACC-GGTT-TA-TGGGTTTA-AA-A-GTGAATG-AAAAATATT---GC-TTGAA----ATAAAAT---CTTTT-AAACCCA-AAATGG-TGGAACGT-----CCATCCGTTCGT
gi|8 : ccaCAACATATGGTGTTTAGGGGCTAGAGAT------------------T---T--------GGGTTAG----GAATA-GAATG-A-AA---CCTCCCAA-AA-C-A-AT-TGATTT-AGAGGCTATT-------A-A---------A-AGAGTATC-AA-A-A-GAGTG-AAAATTACT---GC-TT-------A-AAAAT---CCTTA-AAACCTA-AAACGT-TTGAACGTAGTGACCGTCTGTCCGT
12 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): TCCAAGCAAATATTTGGATTTAAGTGGCTAAGGTTTAGATTTAGAAACTGGTAGGAATGTGTATGATTGCATTTTAAAGTTCATTTTTGGGTTAGGGCCAAAAATCAAATGATGATCTTAAAAAATGTTCCAATATGTGTTATCAGATGCTTCTAAACCCAAACTATTCTAACTTTAGTCCATCTG
Unaligned ( gi|7 ): CAATATGAGCATATATTTTAGATTTAAGATCTAGTGATTAGAGTTAAATTCTACAGTAGTTGGAGTATGGAAGATTGCTTCTTAAACTTTTGGTTTTAGGATCTTAAAATTAGTTTTTAACCCATAAAAGGGGGTACCATTTCGTGTTGCAAGAAGCTCATGAATCTTAAATAT
Unaligned ( gi|9 ): TCAACCTCTCTGTCCATCCCACTGTCTTTCTGTCTGACCAAAGATTCGGAGTTATGGGTCTAAGAATCACAGATAGAATTTCATACCAGTATAAATGTCTGTCTCCTGAATTTCATTTTATTTTCTAAAATCATTTCATAAGCTGGAACCAGTTTATATTGCAAGAATCTCC
Unaligned ( gi|16 ): GAAATCACTATTTTGAGTTTAGGGGTTATAGATTATAGGGGTTAAATCATGTTCATGTATGATTTGCTTCTTACAGTCTTTATTTCAGGGGCCAATTAAAGGTCAGTTTATGAGTGAAAGGAAATTGTACTACTGTGTGTTGTACGATTCT
Unaligned ( gi|19 ): TCTGTCCAGGTAAATACTTTGGGTTTAGGGGCTAAGCTAAAGAATGTGGTAAGAATCTGGTTGGAGTAAAAATTATTACCAGGTCTTACAGTACCTTGTCTTTTTAGGGGCCAATTTGTGTTGCAT
Unaligned ( gi|21 ): TTCTATTGTAGGGTTAACAGTTCATTTATGAGCTGAGAAATGGTAACAATGTGTGTTACAAGAAGTTCCTGAACTCATGTTATTACAATATCCATCCTTAAGTCCATTT
Unaligned ( gi|24 ): GGCCAGGGATTAGGGTTACAGATGGGTTGGAACATGAATGATCGATTCTTAAACCTTCGTTTTAAAATGAGCTTAAAGTATAGTATCTGTATGT
Unaligned ( gi|25 ): TTAAAATCTGAATAATTGTCAGTTAAATCTTCGCTTTAGTGCCCTAAAACAGCTCATGAGCTTAAATTCTATTACCAATTTGTGT
Unaligned ( gi|26 ): GGGTTAAAGTCAGTTTGAGCAAAGAAGAGAATTTGTGTTGCAAGAAGCTCCTGAACCCCAAATATTAGATCATTCGTCCATCTA
Unaligned ( gi|27 ): ATTCATCTGTCTGTCCATGTGTCGATCTGTCTATCCATCTGTCCGAGTGAACCATTTGTGTTTAGGAGCTAAC
Unaligned ( gi|28 ): GGCTGAAAATCAGTTCATGAGCTAATATACTGAAACCAGTATGTGTTGCCAGA
Unaligned ( gi|29 ): TTTATGGGCTAAGGATTAGGGTTAGAATATGAATGCCTGCCTCTTAA
Alignments
lowQualScore : 2 4444444444444444444 1111 111 111111 11111 11111
lowQualScore : 1 5 5 4444444444444444444 0 6666 5 0 2 7777 1 4 4 4 9999 2 2 7777777 2 44 2 2 2 66 2 2 55 3 000 2 999999 3 22222 0 3 3 3 11111
lowQualScore : . . . ................... . .... . . . .... . . . . .... . . ....... . .. . . . .. . . .. . ... . ...... . ..... . . . . .....
lowQualScore : 0 7 0 9999999999999999999 8 5555 7 8 7 2222 8 4 4 4 5555 2 2 2222222 2 00 2 4 5 44 4 5 55 6 000 7 444444 1 11111 7 1 1 3 11111
consensus : NNNTCCGGGTCAAC-ATATGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGATTT-AGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
Reference ( family-482 ) : NNNTCCNGGTCAAC-AT-TGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGATTT-AGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
gi|1 : CTATT-A-AA-A-C-TTCAGTTT-TGGGGCTATTCTGTTTTA-TTC-AGTT-TA-TGAGATAT-AA-A-CTG-GT----ACCTATTT--GCGTTGCA----A-GAGGC---TCCT--AAAGCCA-AAATAT-TCGATCGT-----CCGTC
gi|10 : tctacctgcctgcccgcacgtctgtctgtctgtctgtccgtacgtgggaatatttgggatttaggagctaacaattggaggaagaaattgatatcaatataaattattgtTCAAC-ATATGGTGATGAGAAGCTAGG--TAA-----TA-------GGGTTGA----GAATA-GAAGG-A-AA---CCTCGT-GTAA-C-C-GTCGCCTA-AGGGACCATT-------A-ATC-TGTT-TG-TCGGCTTATAA-T-AAGAGAGAAAAAATACT---GC-TTT------A-AAAAT---CACTT--AACCCAGAGATAT-TAAAACgt
gi|11 : tgtgtgtgaaTCCGGGCCAAC-ATATGGTGT------------------G---TAG------GGGTTAG----GATTA-GAAAGAA-AC---CTTCTA-A-AA-C-C-ATTGATCT-AGCGGGTATA-------A-ATC-GGGA-TA-TGGGCTT--TA-A-ATGGATA-AAAAATACT---GC-TTG------A-AAAGT---TCCTC-AAAAACA-AAATGT-TGGGACGT-----CCGTCCGTACGTaa
gi|12 : ccg------GAGTTAT----GAATA-GAAGGAA-AC---CTTCTA-A-AA-C-C-ATTGATTT-TTGCGCTATA-------C-ATC-GGTT-TA----------AA-A-ATGAGTG-AAAAAAACT---GC-TTGAA----A-AAAAA---TCTTT-AAACCCA-AAATGT-TGAAACAC-----CCATCCGTCCGT
gi|13 : gtccgggccaatatatgggctacgattcGTCAAC-AT--GGTGATTAGGGGCTAGG--TACTG------------GGGTTAA----GATTA-TAAGGAA-A----CTTCAT-A-AAAC-C-ATATAGTT-TGGGGCTTTA-------A-ATG-AGAT-TG-TGGGCTTA-AA-A-ATGAATG-AAAAATACT---GC-TTGAA----A-AACACACGCACTTAAAACTCG-AAATGT-TGc
gi|14 : ctgtTCCGAGCCATCTATATGGTTTTTAGGGGCTAGGA-----G---TTA------GTGTTAT----GAATA-GGAGAAA-AA---CGTCTT-T-AA-T-TTGTCGATGT-AGGGACTATA-------A-ACC-GGGC-TA-TTAACTTA-AATA-CTGTATG-AAAA--ACC---GC-TTAAA----
gi|15 : cgtttgttcgtttc------GGGTT------TAATA-GAAAGAA-A----CCTCAT-A-AA-C-A-GTCGATTT-ATAGGCTATA-------A-ATT-GGTT-TA-TGAGTTT--AA-A-ATAAGTG-CAAATTACT---GC-ATGAA----A-ATA-----CACAT-AAACC---AGATTTGTGGAAcatgaagtgtt
gi|17 : atctgtctgggttaacaatagggtggttaaacttttCTCAT-A-AA-C---AT---TTT-GGGGGCTAAA-------A-ATC-CGTT-TA-TAACCTAA-AA-A-ATTAGTaccat
gi|18 : ttcatctgtctgtcagagcaaacctttgtggttaaagggcaaaaaggattagggctagattttatttagaatataaatcattgtGGGCTAGGGAT-------TAA------TG-TTAG----GAATA-GACGT-A-AA---CCTCATAA-AA-C-C-ATTGATTT-ATGTGCTTTG-------A-ATC-GGT----------TTA-AA-A-ATGAGGG-TAAATTACT---GC-TTGAT----A-AAG-----TCCTT-CAATCCA-AATTGT-TGGAACAC-----CCGTACGTttcagtttgtgttgc
gi|2 : tgatTAGGAGCTAGGGATAAGG---TTA-----------AG----GAATA-GGAGGAA-A----CCACCT-ACAA-C-C-ATTGATTT-AGGGGCAATA-------A-ATC-GGTT-TA-TAGGCTTA-AA-A-TTGAGTG-AAAAGTACTGCAGC-TTG------A-AAAAT---CCCTT-TAACCAA-AAATGT-TAGAACGT-----CCGGCCGTCCGT
gi|20 : cgtccatgttggtgtttagtggctaggggcaacggcAAT-ATATGGTGTTTATGGGCT-----TATGA---TTA------TGGTAAG----GAATA-GAAGAAA-A----------------C-C-ATTGATTT-AGGGGCTATA-------AGATT-AGTT-TA-AGGGTTTA-AC-T-ATGAGTG-GAAATAACT---GC-T
gi|22 : GCTATGGATAAGGA--TAACAAACTGG--TAA----GAATATGAAAGAT-TG---TCTTTC-A-AA-C-A-TTTGTTTT-A-GGGCTA-A-------A-ATC-AGTT-T
gi|23 : aagagaagaagccttaagttaa-GAAGGAA-A----CCTCCT-A-AAAC-T-GTTGATTT-ATGAGCTATA-------A-ATT-TGTT-TAATGAGCT-A-AA-A-ATGAGTG-GAAATTACT---GC-TTG--------AAAATG--CTCTT-AAACCCA-AA
gi|25 : T-A-AA-T-C-TTCGCTTT-AGTGCCC-TA-------A-AAC-AGCT-CA-TGAGCTTA-AA-
gi|3 : ttaaaatctgaataattgtcagtAGGAATAATTGCCTCTT-G-GA-C-A-TTC-ATAT-TGGGGCTA-A-------A-ATC-AATT-TA-TGGGCTTA-AA-ATAT-ATTA-CCAATTTGT---G--TTGCA----A-GAAA----CTCGT-AAACTCG-TAATGT-TAGAACAT-----CCATCCATCttctattaccaatttgtgt
gi|4 : catccatccgtaagagtaaatatttgagtgaaggagtaatggattatgatcagaaactagttcaaatT-TGGGGTTTAGGGGCTAAAGATTAGGGT-TAA------AAATT-GCTTTAAATATGAATGAT-TG---CCTCTT-A-AA-C-C-CTCTATTTTAGGGGCTAAA-------A-ATTAAGTTGTA-TG---TT--GA-A-ACG-GTG-----GTACCA--GT-TTGCACTGCA-AGAAT---TTTCA-AAAACCA-AAATAT-TAGACAAT-----CTGTGTGTC
gi|5 : tctgaccaggaaaattatTCCTGGTCAAC-TT-TGGCGTTTAGGGGCTAGGGATAAGGGGATAA------GGGTTAG----GAATA-AAAAGAA-AA---CCTCTT-A-AA-CAC-ATTGATGT-ATGGCCTATA-------A-ACC-GGTT-TA-TGGGTTTA-AA-A-GTGAATG-AAAAATATT---GC-TTGAA----ATAAAAT---CTTTT-AAACCCA-AAATGG-TGGAACGT-----CCATCCGTTCGT
gi|8 : ccaCAAC-ATATGGTGTTTAGGGGCTAGAGAT---T---T--------GGGTTAG----GAATA-GAATG-A-AA---CCTCCCAA-AA-C-A-ATTGATTT-AGAGGCTATT-------A-A---------A-AGAGTATC-AA-A-A-GAGTG-AAAATTACT---GC-TT-------A-AAAAT---CCTTA-AAACCTA-AAACGT-TTGAACGTAGTGACCGTCTGTCCGT
11 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): TCCAAGCAAATATTTGGATTTAAGTGGCTAAGGTTTAGATTTAGAAACTGGTAGGAATGTGTATGATTGCATTTTAAAGTTCATTTTTGGGTTAGGGCCAAAAATCAAATGATGATCTTAAAAAATGTTCCAATATGTGTTATCAGATGCTTCTAAACCCAAACTATTCTAACTTTAGTCCATCTG
Unaligned ( gi|7 ): CAATATGAGCATATATTTTAGATTTAAGATCTAGTGATTAGAGTTAAATTCTACAGTAGTTGGAGTATGGAAGATTGCTTCTTAAACTTTTGGTTTTAGGATCTTAAAATTAGTTTTTAACCCATAAAAGGGGGTACCATTTCGTGTTGCAAGAAGCTCATGAATCTTAAATAT
Unaligned ( gi|9 ): TCAACCTCTCTGTCCATCCCACTGTCTTTCTGTCTGACCAAAGATTCGGAGTTATGGGTCTAAGAATCACAGATAGAATTTCATACCAGTATAAATGTCTGTCTCCTGAATTTCATTTTATTTTCTAAAATCATTTCATAAGCTGGAACCAGTTTATATTGCAAGAATCTCC
Unaligned ( gi|16 ): GAAATCACTATTTTGAGTTTAGGGGTTATAGATTATAGGGGTTAAATCATGTTCATGTATGATTTGCTTCTTACAGTCTTTATTTCAGGGGCCAATTAAAGGTCAGTTTATGAGTGAAAGGAAATTGTACTACTGTGTGTTGTACGATTCT
Unaligned ( gi|19 ): TCTGTCCAGGTAAATACTTTGGGTTTAGGGGCTAAGCTAAAGAATGTGGTAAGAATCTGGTTGGAGTAAAAATTATTACCAGGTCTTACAGTACCTTGTCTTTTTAGGGGCCAATTTGTGTTGCAT
Unaligned ( gi|21 ): TTCTATTGTAGGGTTAACAGTTCATTTATGAGCTGAGAAATGGTAACAATGTGTGTTACAAGAAGTTCCTGAACTCATGTTATTACAATATCCATCCTTAAGTCCATTT
Unaligned ( gi|24 ): GGCCAGGGATTAGGGTTACAGATGGGTTGGAACATGAATGATCGATTCTTAAACCTTCGTTTTAAAATGAGCTTAAAGTATAGTATCTGTATGT
Unaligned ( gi|26 ): GGGTTAAAGTCAGTTTGAGCAAAGAAGAGAATTTGTGTTGCAAGAAGCTCCTGAACCCCAAATATTAGATCATTCGTCCATCTA
Unaligned ( gi|27 ): ATTCATCTGTCTGTCCATGTGTCGATCTGTCTATCCATCTGTCCGAGTGAACCATTTGTGTTTAGGAGCTAAC
Unaligned ( gi|28 ): GGCTGAAAATCAGTTCATGAGCTAATATACTGAAACCAGTATGTGTTGCCAGA
Unaligned ( gi|29 ): TTTATGGGCTAAGGATTAGGGTTAGAATATGAATGCCTGCCTCTTAA
Alignments
lowQualScore : 5555555555555555555 1111 111 111111 11111 11111
lowQualScore : 4 4 0 4444444444444444444 0 6666 5 0 2 7777 1 4 4 4 9999 2 2 7777777 2 44 2 2 2 66 2 2 55 3 000 2 999999 3 22222 0 3 3 3 11111
lowQualScore : . . . ................... . .... . . . .... . . . . .... . . ....... . .. . . . .. . . .. . ... . ...... . ..... . . . . .....
lowQualScore : 4 8 8 7777777777777777777 8 5555 7 8 7 2222 8 4 4 4 5555 2 2 2222222 2 00 2 4 5 44 4 5 55 6 000 7 444444 1 11111 7 1 1 3 11111
consensus : NNNTCCGGGCCAAC-ATATGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGA-TTTAGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
Reference ( family-482 ) : NNNTCCGGGTCAAC-ATATGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGA-TTTAGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
gi|1 : CTATT-A-AA-A-C-TTCAG-TTTTGGGGCTATTCTGTTTTA-TTC-AGTT-TA-TGAGATAT-AA-A-CTG-GT----ACCTATTT--GCGTTGCA----A-GAGGC---TCCT--AAAGCCA-AAATAT-TCGATCGT-----CCGTC
gi|10 : tctacctgcctgcccgcacgtctgtctgtctgtctgtccgtacgtgggaatatttgggatttaggagctaacaattggaggaagaaattgatatcaatataaattattgtTCAAC-ATATGGTGATGAGAAGCTAGG--TAA-----TA-------GGGTTGA----GAATA-GAAGG-A-AA---CCTCGT-GTAA-C-C-GTCGC-CTAAGGGACCATT-------A-ATC-TGTT-TG-TCGGCTTATAA-T-AAGAGAGAAAAAATACT---GC-TTT------A-AAAAT---CACTT--AACCCAGAGATAT-TAAAACgt
gi|11 : tgtgtgtgaaTCCGGGCCAAC-ATATGGTGT------------------G---TAG------GGGTTAG----GATTA-GAAAGAA-AC---CTTCTA-A-AA-C-C-ATTGA-TCTAGCGGGTATA-------A-ATC-GGGA-TA-TGGGCTT--TA-A-ATGGATA-AAAAATACT---GC-TTG------A-AAAGT---TCCTC-AAAAACA-AAATGT-TGGGACGT-----CCGTCCGTACGTaa
gi|12 : ccgTCCGGGCCAAT-ATATGG---------GCTACG-AT-------TC-------GAGTTAT----GAATA-GAAGGAA-AC---CTTCTA-A-AA-C-C-ATTGA-TTTTTGCGCTATA-------C-ATC-GGTT-TA----------AA-A-ATGAGTG-AAAAAAACT---GC-TTGAA----A-AAAAA---TCTTT-AAACCCA-AAATGT-TGAAACAC-----CCATCCGTCCGT
gi|13 : gGTCAAC-AT--GGTGATTAGGGGCTAGG--TACTG------------GGGTTAA----GATTA-TAAGGAA-A----CTTCAT-A-AAAC-C-ATATA-GTTTGGGGCTTTA-------A-ATG-AGAT-TG-TGGGCTTA-AA-A-ATGAATG-AAAAATACT---GC-TTGAA----A-AACACACGCACTTAAAACTCG-AAATGT-TGc
gi|14 : ctgtTCCGAGCCATCTATATGGTTTTTAGGGGCTAGGA-----G---TTA------GTGTTAT----GAATA-GGAGAAA-AA---CGTCTT-T-AA-T-TTGTCGA-TGTAGGGACTATA-------A-ACC-GGGC-TA-TTAACTTA-AATA-CTGTATG-AAAA--ACC---GC-TTAAA----
gi|15 : cgtttgttcgtttc------GGGTT------TAATA-GAAAGAA-A----CCTCAT-A-AA-C-A-GTCGA-TTTATAGGCTATA-------A-ATT-GGTT-TA-TGAGTTT--AA-A-ATAAGTG-CAAATTACT---GC-ATGAA----A-ATA-----CACAT-AAACC---AGATTTGTGGAAcatgaagtgtt
gi|17 : atctgtctgggttaacaatagggtggttaaacttttCTCAT-A-AA-C---AT----TTTGGGGGCTAAA-------A-ATC-CGTT-TA-TAACCTAA-AA-A-ATTAGTaccat
gi|18 : ttcatctgtctgtcagagcaaacctttgtggttaaagggcaaaaaggattagggctagattttatttagaatataaatcattgtGGGCTAGGGAT-------TAA------TG-TTAG----GAATA-GACGT-A-AA---CCTCATAA-AA-C-C-ATTGA-TTTATGTGCTTTG-------A-ATC-GGT----------TTA-AA-A-ATGAGGG-TAAATTACT---GC-TTGAT----A-AAG-----TCCTT-CAATCCA-AATTGT-TGGAACAC-----CCGTACGTttcagtttgtgttgc
gi|2 : tgatTAGGAGCTAGGGATAAGG---TTA-----------AG----GAATA-GGAGGAA-A----CCACCT-ACAA-C-C-ATTGA-TTTAGGGGCAATA-------A-ATC-GGTT-TA-TAGGCTTA-AA-A-TTGAGTG-AAAAGTACTGCAGC-TTG------A-AAAAT---CCCTT-TAACCAA-AAATGT-TAGAACGT-----CCGGCCGTCCGT
gi|20 : cgtccatgttggtgtttagtggctaggggcaacggcAAT-ATATGGTGTTTATGGGCT-----TATGA---TTA------TGGTAAG----GAATA-GAAGAAA-A----------------C-C-ATTGA-TTTAGGGGCTATA-------AGATT-AGTT-TA-AGGGTTTA-AC-T-ATGAGTG-GAAATAACT---GC-T
gi|22 : GCTATGGATAAGGA--TAACAAACTGG--TAA----GAATATGAAAGAT-TG---TCTTTC-A-AA-C-A-TTTGT-TTTA-GGGCTA-A-------A-ATC-AGTT-T
gi|23 : aagagaagaagccttaagttaa-GAAGGAA-A----CCTCCT-A-AAAC-T-GTTGA-TTTATGAGCTATA-------A-ATT-TGTT-TAATGAGCT-A-AA-A-ATGAGTG-GAAATTACT---GC-TTG--------AAAATG--CTCTT-AAACCCA-AA
gi|25 : T-A-AA-T-C-TTCGC-TTTAGTGCCC-TA-------A-AAC-AGCT-CA-TGAGCTTA-AA-
gi|3 : ttaaaatctgaataattgtcagtAGGAATAATTGCCTCTT-G-GA-C-A-TTC-A-TATTGGGGCTA-A-------A-ATC-AATT-TA-TGGGCTTA-AA-ATAT-ATTA-CCAATTTGT---G--TTGCA----A-GAAA----CTCGT-AAACTCG-TAATGT-TAGAACAT-----CCATCCATCttctattaccaatttgtgt
gi|4 : catccatccgtaagagtaaatatttgagtgaaggagtaatggattatgatcagaaactagttcaaat-ATTTGGGGTTTAGGGGCTAAAGATTAGGGT-TAA------AAATT-GCTTTAAATATGAATGAT-TG---CCTCTT-A-AA-C-C-CTCTATTTTAGGGGCTAAA-------A-ATTAAGTTGTA-TG---TT--GA-A-ACG-GTG-----GTACCA--GT-TTGCACTGCA-AGAAT---TTTCA-AAAACCA-AAATAT-TAGACAAT-----CTGTGTGTC
gi|5 : tctgaccaggaaaattTCCTGGTCAAC-TT-TGGCGTTTAGGGGCTAGGGATAAGGGGATAA------GGGTTAG----GAATA-AAAAGAA-AA---CCTCTT-A-AA-CAC-ATTGA-TGTATGGCCTATA-------A-ACC-GGTT-TA-TGGGTTTA-AA-A-GTGAATG-AAAAATATT---GC-TTGAA----ATAAAAT---CTTTT-AAACCCA-AAATGG-TGGAACGT-----CCATCCGTTCGT
gi|8 : ccaGGACCAAC-ATATGGTGTTTAGGGGCTAGAGAT---T---T--------GGGTTAG----GAATA-GAATG-A-AA---CCTCCCAA-AA-C-A-ATTGA-TTTAGAGGCTATT-------A-A---------A-AGAGTATC-AA-A-A-GAGTG-AAAATTACT---GC-TT-------A-AAAAT---CCTTA-AAACCTA-AAACGT-TTGAACGTAGTGACCGTCTGTCCGT
11 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): TCCAAGCAAATATTTGGATTTAAGTGGCTAAGGTTTAGATTTAGAAACTGGTAGGAATGTGTATGATTGCATTTTAAAGTTCATTTTTGGGTTAGGGCCAAAAATCAAATGATGATCTTAAAAAATGTTCCAATATGTGTTATCAGATGCTTCTAAACCCAAACTATTCTAACTTTAGTCCATCTG
Unaligned ( gi|7 ): CAATATGAGCATATATTTTAGATTTAAGATCTAGTGATTAGAGTTAAATTCTACAGTAGTTGGAGTATGGAAGATTGCTTCTTAAACTTTTGGTTTTAGGATCTTAAAATTAGTTTTTAACCCATAAAAGGGGGTACCATTTCGTGTTGCAAGAAGCTCATGAATCTTAAATAT
Unaligned ( gi|9 ): TCAACCTCTCTGTCCATCCCACTGTCTTTCTGTCTGACCAAAGATTCGGAGTTATGGGTCTAAGAATCACAGATAGAATTTCATACCAGTATAAATGTCTGTCTCCTGAATTTCATTTTATTTTCTAAAATCATTTCATAAGCTGGAACCAGTTTATATTGCAAGAATCTCC
Unaligned ( gi|16 ): GAAATCACTATTTTGAGTTTAGGGGTTATAGATTATAGGGGTTAAATCATGTTCATGTATGATTTGCTTCTTACAGTCTTTATTTCAGGGGCCAATTAAAGGTCAGTTTATGAGTGAAAGGAAATTGTACTACTGTGTGTTGTACGATTCT
Unaligned ( gi|19 ): TCTGTCCAGGTAAATACTTTGGGTTTAGGGGCTAAGCTAAAGAATGTGGTAAGAATCTGGTTGGAGTAAAAATTATTACCAGGTCTTACAGTACCTTGTCTTTTTAGGGGCCAATTTGTGTTGCAT
Unaligned ( gi|21 ): TTCTATTGTAGGGTTAACAGTTCATTTATGAGCTGAGAAATGGTAACAATGTGTGTTACAAGAAGTTCCTGAACTCATGTTATTACAATATCCATCCTTAAGTCCATTT
Unaligned ( gi|24 ): GGCCAGGGATTAGGGTTACAGATGGGTTGGAACATGAATGATCGATTCTTAAACCTTCGTTTTAAAATGAGCTTAAAGTATAGTATCTGTATGT
Unaligned ( gi|26 ): GGGTTAAAGTCAGTTTGAGCAAAGAAGAGAATTTGTGTTGCAAGAAGCTCCTGAACCCCAAATATTAGATCATTCGTCCATCTA
Unaligned ( gi|27 ): ATTCATCTGTCTGTCCATGTGTCGATCTGTCTATCCATCTGTCCGAGTGAACCATTTGTGTTTAGGAGCTAAC
Unaligned ( gi|28 ): GGCTGAAAATCAGTTCATGAGCTAATATACTGAAACCAGTATGTGTTGCCAGA
Unaligned ( gi|29 ): TTTATGGGCTAAGGATTAGGGTTAGAATATGAATGCCTGCCTCTTAA
Alignments
lowQualScore : 5555555555555555555 1111 111 111111 11111 11111
lowQualScore : 4 4 0 4444444444444444444 0 6666 5 0 2 7777 1 4 4 4 9999 2 2 7777777 2 44 2 2 2 66 2 2 55 3 000 2 999999 3 22222 0 3 3 3 11111
lowQualScore : . . . ................... . .... . . . .... . . . . .... . . ....... . .. . . . .. . . .. . ... . ...... . ..... . . . . .....
lowQualScore : 4 8 8 7777777777777777777 8 5555 7 8 7 2222 8 4 4 4 5555 2 2 2222222 2 00 2 4 5 44 4 5 55 6 000 7 444444 1 11111 7 1 1 3 11111
consensus : NNNTCCGGGCCAAC-ATATGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGA-TTTAGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
Reference ( family-482 ) : NNNTCCGGGCCAAC-ATATGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGA-TTTAGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
gi|1 : CTATT-A-AA-A-C-TTCAG-TTTTGGGGCTATTCTGTTTTA-TTC-AGTT-TA-TGAGATAT-AA-A-CTG-GT----ACCTATTT--GCGTTGCA----A-GAGGC---TCCT--AAAGCCA-AAATAT-TCGATCGT-----CCGTC
gi|10 : tctacctgcctgcccgcacgtctgtctgtctgtctgtccgtacgtgggaatatttgggatttaggagctaacaattggaggaagaaattgatatcaatataaattattgtCAAC-ATATGGTGATGAGAAGCTAGG--TAA-----TA-------GGGTTGA----GAATA-GAAGG-A-AA---CCTCGT-GTAA-C-C-GTCGC-CTAAGGGACCATT-------A-ATC-TGTT-TG-TCGGCTTATAA-T-AAGAGAGAAAAAATACT---GC-TTT------A-AAAAT---CACTT--AACCCAGAGATAT-TAAAACgt
gi|11 : tgtgtgtgaatTCCGGGCCAAC-ATATGGTGT------------------G---TAG------GGGTTAG----GATTA-GAAAGAA-AC---CTTCTA-A-AA-C-C-ATTGA-TCTAGCGGGTATA-------A-ATC-GGGA-TA-TGGGCTT--TA-A-ATGGATA-AAAAATACT---GC-TTG------A-AAAGT---TCCTC-AAAAACA-AAATGT-TGGGACGT-----CCGTCCGTACGTaa
gi|12 : ccgTCCGGGCCAAT-ATATGG---------GCTACG-AT-------TC-------GAGTTAT----GAATA-GAAGGAA-AC---CTTCTA-A-AA-C-C-ATTGA-TTTTTGCGCTATA-------C-ATC-GGTT-TA----------AA-A-ATGAGTG-AAAAAAACT---GC-TTGAA----A-AAAAA---TCTTT-AAACCCA-AAATGT-TGAAACAC-----CCATCCGTCCGT
gi|13 : gGTCAAC-AT--GGTGATTAGGGGCTAGG--TACTG------------GGGTTAA----GATTA-TAAGGAA-A----CTTCAT-A-AAAC-C-ATATA-GTTTGGGGCTTTA-------A-ATG-AGAT-TG-TGGGCTTA-AA-A-ATGAATG-AAAAATACT---GC-TTGAA----A-AACACACGCACTTAAAACTCG-AAATGT-TGc
gi|14 : ctgtTCCGAGCCATCTATATGGTTTTTAGGGGCTAGGA-----G---TTA------GTGTTAT----GAATA-GGAGAAA-AA---CGTCTT-T-AA-T-TTGTCGA-TGTAGGGACTATA-------A-ACC-GGGC-TA-TTAACTTA-AATA-CTGTATG-AAAA--ACC---GC-TTAAA----
gi|15 : cgtttgttcgtttc------GGGTT------TAATA-GAAAGAA-A----CCTCAT-A-AA-C-A-GTCGA-TTTATAGGCTATA-------A-ATT-GGTT-TA-TGAGTTT--AA-A-ATAAGTG-CAAATTACT---GC-ATGAA----A-ATA-----CACAT-AAACC---AGATTTGTGGAAcatgaagtgtt
gi|17 : atctgtctgggttaacaatagggtggttaaacttttCTCAT-A-AA-C---AT----TTTGGGGGCTAAA-------A-ATC-CGTT-TA-TAACCTAA-AA-A-ATTAGTaccat
gi|18 : ttcatctgtctgtcagagcaaacctttgtggttaaagggcaaaaaggattagggctagattttatttagaatataaatcattgtGGGCTAGGGAT-------TAA------TG-TTAG----GAATA-GACGT-A-AA---CCTCATAA-AA-C-C-ATTGA-TTTATGTGCTTTG-------A-ATC-GGT----------TTA-AA-A-ATGAGGG-TAAATTACT---GC-TTGAT----A-AAG-----TCCTT-CAATCCA-AATTGT-TGGAACAC-----CCGTACGTttcagtttgtgttgc
gi|2 : tgatTAGGAGCTAGGGATAAGG---TTA-----------AG----GAATA-GGAGGAA-A----CCACCT-ACAA-C-C-ATTGA-TTTAGGGGCAATA-------A-ATC-GGTT-TA-TAGGCTTA-AA-A-TTGAGTG-AAAAGTACTGCAGC-TTG------A-AAAAT---CCCTT-TAACCAA-AAATGT-TAGAACGT-----CCGGCCGTCCGT
gi|20 : cgtccatgttggtgtttagtggctaggggcaacggcAAT-ATATGGTGTTTATGGGCT-----TATGA---TTA------TGGTAAG----GAATA-GAAGAAA-A----------------C-C-ATTGA-TTTAGGGGCTATA-------AGATT-AGTT-TA-AGGGTTTA-AC-T-ATGAGTG-GAAATAACT---GC-T
gi|22 : GCTATGGATAAGGA--TAACAAACTGG--TAA----GAATATGAAAGAT-TG---TCTTTC-A-AA-C-A-TTTGT-TTTA-GGGCTA-A-------A-ATC-AGTT-T
gi|23 : aagagaagaagccttaagttaa-GAAGGAA-A----CCTCCT-A-AAAC-T-GTTGA-TTTATGAGCTATA-------A-ATT-TGTT-TAATGAGCT-A-AA-A-ATGAGTG-GAAATTACT---GC-TTG--------AAAATG--CTCTT-AAACCCA-AA
gi|25 : T-A-AA-T-C-TTCGC-TTTAGTGCCC-TA-------A-AAC-AGCT-CA-TGAGCTTA-AA-
gi|3 : ttaaaatctgaataattgtcagtAGGAATAATTGCCTCTT-G-GA-C-A-TTC-A-TATTGGGGCTA-A-------A-ATC-AATT-TA-TGGGCTTA-AA-ATAT-ATTA-CCAATTTGT---G--TTGCA----A-GAAA----CTCGT-AAACTCG-TAATGT-TAGAACAT-----CCATCCATCttctattaccaatttgtgt
gi|4 : catccatccgtaagagtaaatatttgagtgaaggagtaatggattatgatcagaaactagttcaaat-ATTTGGGGTTTAGGGGCTAAAGATTAGGGT-TAA------AAATT-GCTTTAAATATGAATGAT-TG---CCTCTT-A-AA-C-C-CTCTATTTTAGGGGCTAAA-------A-ATTAAGTTGTA-TG---TT--GA-A-ACG-GTG-----GTACCA--GT-TTGCACTGCA-AGAAT---TTTCA-AAAACCA-AAATAT-TAGACAAT-----CTGTGTGTC
gi|5 : tctgaccaggaaaattTCCTGGTCAAC-TT-TGGCGTTTAGGGGCTAGGGATAAGGGGATAA------GGGTTAG----GAATA-AAAAGAA-AA---CCTCTT-A-AA-CAC-ATTGA-TGTATGGCCTATA-------A-ACC-GGTT-TA-TGGGTTTA-AA-A-GTGAATG-AAAAATATT---GC-TTGAA----ATAAAAT---CTTTT-AAACCCA-AAATGG-TGGAACGT-----CCATCCGTTCGT
gi|8 : ccaGGACCAAC-ATATGGTGTTTAGGGGCTAGAGAT---T---T--------GGGTTAG----GAATA-GAATG-A-AA---CCTCCCAA-AA-C-A-ATTGA-TTTAGAGGCTATT-------A-A---------A-AGAGTATC-AA-A-A-GAGTG-AAAATTACT---GC-TT-------A-AAAAT---CCTTA-AAACCTA-AAACGT-TTGAACGTAGTGACCGTCTGTCCGT
blockSeqs : T A GATAAGGATAACAAACT CTTT T T ATTG G A T A TTG C T . G AA G A G AT T T AA A GCA . CACTGC T ACACG A G G AGTGA
blockSeqs : . A GATAAGGGGATAA . T . C T A C A ACA T . . . T . . G A . . A A A . AA . ATG . . . .
blockSeqs : . A GATTAGGGTTAA . . . C T . . . CG T . . . G . . G A . . A A . . AA . AT . . . .
blockSeqs : . A GATAAGGTTA . . . A A . . . CA A . . . G . . A A . . A A . . AA . GT . . . .
blockSeqs : . T TATGATTA . . . A T . . . CA C . . . A . . A A . . A T . . AA . AA . . . .
blockSeqs : . A GATTAA . . . G A . . . CA C . . . G . . A A . . C T . . AT . AT . . . .
blockSeqs : . . TACTG . . . G A . . . AG T . . . G . . G A . . T G . . CA . AT . . . .
blockSeqs : . . AGTTA . . . A A . . . CA T . . . C . . G A . . A T . . AA . AT . . . .
blockSeqs : GATTT . . . A C . . . CA T . . . G . . A A . . G T . . . . AT . . .
blockSeqs : GTAG . . . . T . . . CA T . . . G . . A A . . G T . . . . A . . .
blockSeqs : ATTC . . . . C . . . AT T . . . A . . G A . . C G . . . . . . . .
blockSeqs : . . . . T . . . TG C . . . A . . G C . . A A . . . . . . .
blockSeqs : . . . T . . . CT C . . . T . . A . . . A T . . .
blockSeqs : . . T . . . AT C . . . A . . . . . . . . . .
blockSeqs : C . . . CC T . . . A . . . . . .
blockSeqs : . . . . AA T . . . G . . . . .
blockSeqs : . . . A . . . . . .
blockSeqCons : ******* A* ***
originalCons : NNNTCCGGGCCAAC-ATATGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGA-TTTAGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
finalCons : NNNTCCGGGCCAAC-ATATGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGA-TTTAGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTGA-AAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
11 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): TCCAAGCAAATATTTGGATTTAAGTGGCTAAGGTTTAGATTTAGAAACTGGTAGGAATGTGTATGATTGCATTTTAAAGTTCATTTTTGGGTTAGGGCCAAAAATCAAATGATGATCTTAAAAAATGTTCCAATATGTGTTATCAGATGCTTCTAAACCCAAACTATTCTAACTTTAGTCCATCTG
Unaligned ( gi|7 ): CAATATGAGCATATATTTTAGATTTAAGATCTAGTGATTAGAGTTAAATTCTACAGTAGTTGGAGTATGGAAGATTGCTTCTTAAACTTTTGGTTTTAGGATCTTAAAATTAGTTTTTAACCCATAAAAGGGGGTACCATTTCGTGTTGCAAGAAGCTCATGAATCTTAAATAT
Unaligned ( gi|9 ): TCAACCTCTCTGTCCATCCCACTGTCTTTCTGTCTGACCAAAGATTCGGAGTTATGGGTCTAAGAATCACAGATAGAATTTCATACCAGTATAAATGTCTGTCTCCTGAATTTCATTTTATTTTCTAAAATCATTTCATAAGCTGGAACCAGTTTATATTGCAAGAATCTCC
Unaligned ( gi|16 ): GAAATCACTATTTTGAGTTTAGGGGTTATAGATTATAGGGGTTAAATCATGTTCATGTATGATTTGCTTCTTACAGTCTTTATTTCAGGGGCCAATTAAAGGTCAGTTTATGAGTGAAAGGAAATTGTACTACTGTGTGTTGTACGATTCT
Unaligned ( gi|19 ): TCTGTCCAGGTAAATACTTTGGGTTTAGGGGCTAAGCTAAAGAATGTGGTAAGAATCTGGTTGGAGTAAAAATTATTACCAGGTCTTACAGTACCTTGTCTTTTTAGGGGCCAATTTGTGTTGCAT
Unaligned ( gi|21 ): TTCTATTGTAGGGTTAACAGTTCATTTATGAGCTGAGAAATGGTAACAATGTGTGTTACAAGAAGTTCCTGAACTCATGTTATTACAATATCCATCCTTAAGTCCATTT
Unaligned ( gi|24 ): GGCCAGGGATTAGGGTTACAGATGGGTTGGAACATGAATGATCGATTCTTAAACCTTCGTTTTAAAATGAGCTTAAAGTATAGTATCTGTATGT
Unaligned ( gi|26 ): GGGTTAAAGTCAGTTTGAGCAAAGAAGAGAATTTGTGTTGCAAGAAGCTCCTGAACCCCAAATATTAGATCATTCGTCCATCTA
Unaligned ( gi|27 ): ATTCATCTGTCTGTCCATGTGTCGATCTGTCTATCCATCTGTCCGAGTGAACCATTTGTGTTTAGGAGCTAAC
Unaligned ( gi|28 ): GGCTGAAAATCAGTTCATGAGCTAATATACTGAAACCAGTATGTGTTGCCAGA
Unaligned ( gi|29 ): TTTATGGGCTAAGGATTAGGGTTAGAATATGAATGCCTGCCTCTTAA
Alignments
lowQualScore : 5555555555555555555 1111 111 111111 11111 11111
lowQualScore : 4 4 0 4444444444444444444 0 6666 5 0 2 7777 1 4 4 4 9999 2 2 7777777 2 44 2 2 2 66 2 2 55 3 000 2 999999 3 22222 0 3 3 3 11111
lowQualScore : . . . ................... . .... . . . .... . . . . .... . . ....... . .. . . . .. . . .. . ... . ...... . ..... . . . . .....
lowQualScore : 4 8 8 7777777777777777777 8 5555 7 8 7 2222 8 4 4 4 5555 2 2 2222222 2 00 2 4 5 44 4 5 55 6 000 7 444444 1 11111 7 1 1 3 11111
consensus : NNNTCCGGGCCAAC-ATATGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGA-TTTAGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
Reference ( family-482 ) : NNNTCCGGGCCAAC-ATATGGTGTTTAGGGGCTAGGGATAAGG---TAA------GGGTTAG----GAATA-GAAGGAA-AA---CCTCNT-A-AA-C-C-GTCGA-TTTAGGGGCTATA-------A-ATC-GGTT-TA-TGGGCTTA-AA-A-ATGAGTG-AAAANTACT---GC-TTGAA----A-AAAAT---CCCTT-AAACCCA-AAATGT-TGGAACGT-----CCGTCCGTCCGT
gi|1 : CTATT-A-AA-A-C-TTCAG-TTTTGGGGCTATTCTGTTTTA-TTC-AGTT-TA-TGAGATAT-AA-A-CTG-GT----ACCTATTT--GCGTTGCA----A-GAGGC---TCCT--AAAGCCA-AAATAT-TCGATCGT-----CCGTC
gi|10 : tctacctgcctgcccgcacgtctgtctgtctgtctgtccgtacgtgggaatatttgggatttaggagctaacaattggaggaagaaattgatatcaatataaattattgtCAAC-ATATGGTGATGAGAAGCTAGG--TAA-----TA-------GGGTTGA----GAATA-GAAGG-A-AA---CCTCGT-GTAA-C-C-GTCGC-CTAAGGGACCATT-------A-ATC-TGTT-TG-TCGGCTTATAA-T-AAGAGAGAAAAAATACT---GC-TTT------A-AAAAT---CACTT--AACCCAGAGATAT-TAAAACgt
gi|11 : tgtgtgtgaatTCCGGGCCAAC-ATATGGTGT------------------G---TAG------GGGTTAG----GATTA-GAAAGAA-AC---CTTCTA-A-AA-C-C-ATTGA-TCTAGCGGGTATA-------A-ATC-GGGA-TA-TGGGCTT--TA-A-ATGGATA-AAAAATACT---GC-TTG------A-AAAGT---TCCTC-AAAAACA-AAATGT-TGGGACGT-----CCGTCCGTACGTaa
gi|12 : ccgTCCGGGCCAAT-ATATGG---------GCTACG-AT-------TC-------GAGTTAT----GAATA-GAAGGAA-AC---CTTCTA-A-AA-C-C-ATTGA-TTTTTGCGCTATA-------C-ATC-GGTT-TA----------AA-A-ATGAGTG-AAAAAAACT---GC-TTGAA----A-AAAAA---TCTTT-AAACCCA-AAATGT-TGAAACAC-----CCATCCGTCCGT
gi|13 : gGTCAAC-AT--GGTGATTAGGGGCTAGG--TACTG------------GGGTTAA----GATTA-TAAGGAA-A----CTTCAT-A-AAAC-C-ATATA-GTTTGGGGCTTTA-------A-ATG-AGAT-TG-TGGGCTTA-AA-A-ATGAATG-AAAAATACT---GC-TTGAA----A-AACACACGCACTTAAAACTCG-AAATGT-TGc
gi|14 : ctgtTCCGAGCCATCTATATGGTTTTTAGGGGCTAGGA-----G---TTA------GTGTTAT----GAATA-GGAGAAA-AA---CGTCTT-T-AA-T-TTGTCGA-TGTAGGGACTATA-------A-ACC-GGGC-TA-TTAACTTA-AATA-CTGTATG-AAAA--ACC---GC-TTAAA----
gi|15 : cgtttgttcgtttc------GGGTT------TAATA-GAAAGAA-A----CCTCAT-A-AA-C-A-GTCGA-TTTATAGGCTATA-------A-ATT-GGTT-TA-TGAGTTT--AA-A-ATAAGTG-CAAATTACT---GC-ATGAA----A-ATA-----CACAT-AAACC---AGATTTGTGGAAcatgaagtgtt
gi|17 : atctgtctgggttaacaatagggtggttaaacttttCTCAT-A-AA-C---AT----TTTGGGGGCTAAA-------A-ATC-CGTT-TA-TAACCTAA-AA-A-ATTAGTaccat
gi|18 : ttcatctgtctgtcagagcaaacctttgtggttaaagggcaaaaaggattagggctagattttatttagaatataaatcattgtGGGCTAGGGAT-------TAA------TG-TTAG----GAATA-GACGT-A-AA---CCTCATAA-AA-C-C-ATTGA-TTTATGTGCTTTG-------A-ATC-GGT----------TTA-AA-A-ATGAGGG-TAAATTACT---GC-TTGAT----A-AAG-----TCCTT-CAATCCA-AATTGT-TGGAACAC-----CCGTACGTttcagtttgtgttgc
gi|2 : tgatTAGGAGCTAGGGATAAGG---TTA-----------AG----GAATA-GGAGGAA-A----CCACCT-ACAA-C-C-ATTGA-TTTAGGGGCAATA-------A-ATC-GGTT-TA-TAGGCTTA-AA-A-TTGAGTG-AAAAGTACTGCAGC-TTG------A-AAAAT---CCCTT-TAACCAA-AAATGT-TAGAACGT-----CCGGCCGTCCGT
gi|20 : cgtccatgttggtgtttagtggctaggggcaacggcAAT-ATATGGTGTTTATGGGCT-----TATGA---TTA------TGGTAAG----GAATA-GAAGAAA-A----------------C-C-ATTGA-TTTAGGGGCTATA-------AGATT-AGTT-TA-AGGGTTTA-AC-T-ATGAGTG-GAAATAACT---GC-T
gi|22 : GCTATGGATAAGGA--TAACAAACTGG--TAA----GAATATGAAAGAT-TG---TCTTTC-A-AA-C-A-TTTGT-TTTA-GGGCTA-A-------A-ATC-AGTT-T
gi|23 : aagagaagaagccttaagttaa-GAAGGAA-A----CCTCCT-A-AAAC-T-GTTGA-TTTATGAGCTATA-------A-ATT-TGTT-TAATGAGCT-A-AA-A-ATGAGTG-GAAATTACT---GC-TTG--------AAAATG--CTCTT-AAACCCA-AA
gi|25 : T-A-AA-T-C-TTCGC-TTTAGTGCCC-TA-------A-AAC-AGCT-CA-TGAGCTTA-AA-
gi|3 : ttaaaatctgaataattgtcagtAGGAATAATTGCCTCTT-G-GA-C-A-TTC-A-TATTGGGGCTA-A-------A-ATC-AATT-TA-TGGGCTTA-AA-ATAT-ATTA-CCAATTTGT---G--TTGCA----A-GAAA----CTCGT-AAACTCG-TAATGT-TAGAACAT-----CCATCCATCttctattaccaatttgtgt
gi|4 : catccatccgtaagagtaaatatttgagtgaaggagtaatggattatgatcagaaactagttcaaat-ATTTGGGGTTTAGGGGCTAAAGATTAGGGT-TAA------AAATT-GCTTTAAATATGAATGAT-TG---CCTCTT-A-AA-C-C-CTCTATTTTAGGGGCTAAA-------A-ATTAAGTTGTA-TG---TT--GA-A-ACG-GTG-----GTACCA--GT-TTGCACTGCA-AGAAT---TTTCA-AAAACCA-AAATAT-TAGACAAT-----CTGTGTGTC
gi|5 : tctgaccaggaaaattTCCTGGTCAAC-TT-TGGCGTTTAGGGGCTAGGGATAAGGGGATAA------GGGTTAG----GAATA-AAAAGAA-AA---CCTCTT-A-AA-CAC-ATTGA-TGTATGGCCTATA-------A-ACC-GGTT-TA-TGGGTTTA-AA-A-GTGAATG-AAAAATATT---GC-TTGAA----ATAAAAT---CTTTT-AAACCCA-AAATGG-TGGAACGT-----CCATCCGTTCGT
gi|8 : ccaGGACCAAC-ATATGGTGTTTAGGGGCTAGAGAT---T---T--------GGGTTAG----GAATA-GAATG-A-AA---CCTCCCAA-AA-C-A-ATTGA-TTTAGAGGCTATT-------A-A---------A-AGAGTATC-AA-A-A-GAGTG-AAAATTACT---GC-TT-------A-AAAAT---CCTTA-AAACCTA-AAACGT-TTGAACGTAGTGACCGTCTGTCCGT
11 sequences could not be aligned to this reference sequence:
Unaligned ( gi|6 ): TCCAAGCAAATATTTGGATTTAAGTGGCTAAGGTTTAGATTTAGAAACTGGTAGGAATGTGTATGATTGCATTTTAAAGTTCATTTTTGGGTTAGGGCCAAAAATCAAATGATGATCTTAAAAAATGTTCCAATATGTGTTATCAGATGCTTCTAAACCCAAACTATTCTAACTTTAGTCCATCTG
Unaligned ( gi|7 ): CAATATGAGCATATATTTTAGATTTAAGATCTAGTGATTAGAGTTAAATTCTACAGTAGTTGGAGTATGGAAGATTGCTTCTTAAACTTTTGGTTTTAGGATCTTAAAATTAGTTTTTAACCCATAAAAGGGGGTACCATTTCGTGTTGCAAGAAGCTCATGAATCTTAAATAT
Unaligned ( gi|9 ): TCAACCTCTCTGTCCATCCCACTGTCTTTCTGTCTGACCAAAGATTCGGAGTTATGGGTCTAAGAATCACAGATAGAATTTCATACCAGTATAAATGTCTGTCTCCTGAATTTCATTTTATTTTCTAAAATCATTTCATAAGCTGGAACCAGTTTATATTGCAAGAATCTCC
Unaligned ( gi|16 ): GAAATCACTATTTTGAGTTTAGGGGTTATAGATTATAGGGGTTAAATCATGTTCATGTATGATTTGCTTCTTACAGTCTTTATTTCAGGGGCCAATTAAAGGTCAGTTTATGAGTGAAAGGAAATTGTACTACTGTGTGTTGTACGATTCT
Unaligned ( gi|19 ): TCTGTCCAGGTAAATACTTTGGGTTTAGGGGCTAAGCTAAAGAATGTGGTAAGAATCTGGTTGGAGTAAAAATTATTACCAGGTCTTACAGTACCTTGTCTTTTTAGGGGCCAATTTGTGTTGCAT
Unaligned ( gi|21 ): TTCTATTGTAGGGTTAACAGTTCATTTATGAGCTGAGAAATGGTAACAATGTGTGTTACAAGAAGTTCCTGAACTCATGTTATTACAATATCCATCCTTAAGTCCATTT
Unaligned ( gi|24 ): GGCCAGGGATTAGGGTTACAGATGGGTTGGAACATGAATGATCGATTCTTAAACCTTCGTTTTAAAATGAGCTTAAAGTATAGTATCTGTATGT
Unaligned ( gi|26 ): GGGTTAAAGTCAGTTTGAGCAAAGAAGAGAATTTGTGTTGCAAGAAGCTCCTGAACCCCAAATATTAGATCATTCGTCCATCTA
Unaligned ( gi|27 ): ATTCATCTGTCTGTCCATGTGTCGATCTGTCTATCCATCTGTCCGAGTGAACCATTTGTGTTTAGGAGCTAAC
Unaligned ( gi|28 ): GGCTGAAAATCAGTTCATGAGCTAATATACTGAAACCAGTATGTGTTGCCAGA
Unaligned ( gi|29 ): TTTATGGGCTAAGGATTAGGGTTAGAATATGAATGCCTGCCTCTTAA