lowQualScore : 11111111111111111111111111111111111111 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 111111111 2222 00000000000000000000000000000000000000 111111 111 22222222 222222 11111 2 11111111 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 11111111111 2222222 11111111 11
lowQualScore : 6 6 777777777 44 1111 3 55555555555555555555555555555555555555 5 1 9999999 22 1 888888 99 44 1 2 333 444 2 66666666 2 6 111111 55555 4444 6 5555555 22 6 4444 4 6 999 333 7 6 1 33333 666 55 3 1 1 0 5555 1 2 77777777 9999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 33 2 00000000000 2 6 3 5 333 8888888 77777777 7 5 2 44 22
lowQualScore : . . ......... .. .... . ...................................... . . ....... .. . ...... .. .. . . ... ... . ........ . . ...... ..... .... . ....... .. . .... . . ... ... . . . ..... ... .. . . . . .... . . ........ ........................................................................................................................................................................................................................................................................................... .. . ........... . . . . ... ....... ........ . . . .. ..
lowQualScore : 0 0 111111111 22 6666 7 99999999999999999999999999999999999999 7 8 9999999 66 7 222222 00 33 8 8 222 111 1 00000000 1 7 666666 33333 5555 5 5555555 88 1 2222 1 5 222 777 4 0 8 00000 222 00 6 8 8 5 0000 9 0 66666666 2222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 2 66666666666 2 2 4 6 222 9999999 33333333 2 2 5 11 00
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA-T-TT--T-ATG--CCATCGAG-GGCTAA-CAG-ACG---ATCAGTTAAC-------C-TAA---CCACTNTT-TC-----CNG--GG-A--NC--GGG-CCC--GAT-TAGCTCAGTCGGTNAC---GCGTCTGACTATCAATCCAGGG-GTC-----GTGAGTTCGAAT-CCCCGCCCGGC-AACAGTC-----TCCGT----GATGATTGATATA----C--GACAT--TGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAAG--TT---ATCAGTTACTTGCGGAGA-TGGGGT--GTGCTCGAGTA-C-T--GGTT-A-ACCTT---TCAG-GATCCCAGGAAAC-AGTGGTTA-G------GTTAACTGA--------------TC--------------G-------------------------ATG---G-----------C-----------GCTAAA-----------TATTCAA---TCAAT-CAAT-CAA------------TTCCTGGGATCCT--GAA--AGGTTAACCAGTACTC----GAGCAC-A---C-------------CCCA-T--CTCCG-------CAAGTAAC---TG--A--T-----------AACT--TTCCCACTTGAATCAG-G-----GT--G-AGAGAC-----------GAATGA-TAATGAGACGCAATGT--CGTAT----ATCAATCATCACGGAG---ACTGTTGCCGGGCGGGG-ATTCGAACTCACGAT
Reference ( gi|6 ) : TATGTCGGCGTTAGTACTAATCTGACAGAAATGAGTATTTAACATCA-T-TC--T-ATG--CCATCCAT-GACT-A-CAG-CTGTAAATCAATTAACAT----AC-TAATCCCCATTCTT-TC-----CAG--GG-A--AC--GGA-CCC--GAT-TAGCTCAGTCGGTAAT---GCGTCTGACTATTACTCCAGGG-GTC-----TTCAGTTCGAAT-CCTCGCCCAGA-ATCAGTC-----TCCGT----GGTGATTGATATA----C--GACAT--TGTGTCTTATT----ATCATTCGTTTCTCACCGCTGATCCAAGTGGGAAAA--TT---ACCAGTTACTTACGGAGA-TGGGAC--GTGCTCGAGTA-T-T--GG-T-A-ACCTT---TCAG-GATCCCAGGAAAC-AGTGGTTA-T------GTTAACTGA--------------TC--------------G-------------------------ATG---G-----------C-----------GC---------------TATTCAA---TCAAT-CAAT-TAA------------TTCCTGGGATTGT--GGT--ATTTTAACCGGTACTC----AACCAC-A---C-------------CC-A-T--CTCGG-------C----------TG--A--C-----------AATT--T----------------G-----GT--G-AGAGAC-----------GAATGA-TAATGAAACGCAGTGT--TGTAA----AGCAATCATCACATAG---GCTGTCGCTGGGCGGGG-ATTTAAACTTGCGATGATATGTCTTGGTTGT
gi|7 : TGAATATTTAGCGTTA-T-TT--TTATG--CCATCGAG-AGCTAA-CAG-ACG---ATCAGTTAAC-------C-TAA---CCACTGTT-TC-----CTG--GG-A--
gi|5 : aatttgatttctaatgagtgtgaacttaacctaagccatgaaaattgttttctcaatgcatcatctattttatcattataagcgtaataataaaatgaggccttaaattttgtataataatcaagttgagacatgtatgattgattgatTGAATATTAAGCGTCA-T-TT--TTATG--CCATCGAG-GGCTAA-CAG-TCG---ATCAGTTAAC-------C-GAA---CCACTGTT-TC-----CTG--GG-A--tcctgaaaggttaaccaatactcgaggacaccccatttctgcaagtaactgataactttcccacttgaaccagcagtgagaaacgaatgataatgcgacacaatgttgtatatcagtcatcgaggagaatgctgtcgggcggggattcaaactcacgacccctggattgatagtcagacgcataactgaccggctcatcgtgcccgccatattatgtatgaattgatcatatatcatccctttagtaatggtaaatacggtcaaacctgtataagtggtca
gi|19 : aaataattacatacctatactatatcaaaagaatgcaattaaacataagctgacttgtctgtggaccagtatctaatttttaaagggaatgcaggatggatgtaacgtcattttaaaattgagattgattgatTGAATATTTAGCATCATT-TT--T-ATG--CCATCAAG-GGCTAA-CAGAC----AATCAGTTAAC-------C-TAA---CCACTATT-TC-----CTG--GG-A--ccctgaaaggttaaccaacactttagcacaccccatctccgcaagtaactgataacttttccactttaatcagtgtagaggcgaatgataatgagacacaatgttgtatatcaatcatcacggtgactgttgccggaaggggattcgaaatcaagacccttgaattgatagtcagacgcgttaccgactgagcttatcggatccggcttttgaaattgggatatataaatataattatgtttatggaagatttctatatctctcaaagcagattatataacatgtatacatgcaagcaagcattttgaatgtggtttaacgccattaataacac
gi|13 : tcaaagaacttatcggcagcgactgaaagattgattgatTGAATATTTAGCATCATT-TT--T-ATG--CCATCAAG-GGCTAA-CAG-ACG---ATCAGTTAAC-------C-TAA---CCACTGTT-TC-----CTG--GG-A--ttaaccagtacttgagcacaccccatctccgcaagtaactgataactttcccacttgaatcagcggtgaaagacaaatgataatgagacacaatgtcgtatttcaatcatcatggactgttgccgggcggggattcaaattcacgacccctggattgatagtcagacgtgtaaccgactgagctaatcgggccgggccgtgcgactgaaagaaaagaaaaatgcagagtatttacagagagaacgagatcgaataag
gi|4 : cacaccaaatatgctgttctaccaaaaaaacgggcacaagatctctgaacttgctaaaccatcttgctaatataattgattgattgattgatTGAATATTTTGCATCA-T-TT--TAATG--CCATTGGG-GGCTAA-CAG-ATG---ATCAGTTAAC-------C-TAA---CCACTGTT-TC-----CTG--GG-A--ttaacctgtactcgagcacaccccatctctgcaagtaactgacaacttccccactcgaatcagtggttagagacgaatgatgagacacaatgttgtgtatcaatcatcacggagtcttttgccgggcggagatttgaactcatgacccctggattgatagtcagacgcgtatccgactgagctaaccgggacccagcttgcttatataaataaaaaatatcaaaatgtcagccttagcactggcagaaatatagagaa
gi|14 : tacatatattcatatatttttttggttggtaacttgaaaacagttaatttcaaatacagtttccggttaaatatataaaagtattttcctctccattttttgtgcacttttacgagtaggtttgattgatTGAATATTTAGCGTCA-TATT--T-ATG--CCATTGAG-GACT-A---------ATATCAGTTAAC-------C-AAA---CCACTCTT-TT-----CTG--GA-A--tcctgatggttaaccagccctcgggcacaccaatctttgcaagttactgttaactttcccacttgaatcagtagtgagagatgaatgataatgagacacaatgtcgtatatcaattatcatggggactgttgtctgttggggattcgaactcacaacccctggcttgatagtcagacatgtaaccaactgagctaaacaggcccagtttatgagtaggaagacatctgagaagtatttataagaaaagttttagcaaatttcatgagctaaaatatcctgttgtataagtgtatcagtgtatatgcaaccatgtcttgtttaggtgtatatttgctatgttattgtaaaagtgactt
gi|11 : actggagaaaaggacttgtaaccaaccccatcaaattgtttatagaagaatgtataaactacaataggatttattgaacacgtgattacgttagattgaagcgttacggatgatataacttattgtttgttTGAATATTTGGCGTCA-T-TT--TTGTG--CCATCGAA-GGCT-AGCAG-ACG---ATCAGTTAACCTAACCAC-TAA---CCACTGTT-TC-----CTG--GG-A--tcctgaaagattaaccaatattcaagcacatcgatatccgcaagtaactgataactttccaacttgaatcagtggtgagagacgaatgataatgagacgcagtgtcataattatatcaatcgtcacggagactgttgccgaacggcgattcgaactccctatccctgaatggatagtcaggcacactaccgaccgagctaaccgggtcaagctatat
gi|12 : ggtggctttgctctctggaactgtaggagtaaaaattcatttaataattgattgatTGAATATTTAGCATCATT-TT--T-ATG--CCAT-CATGGGCTAA-CAG-ACG---ATCAGTTAAT-------C-TAA---CCACTGTT-TC-----Ctcctaaaaggttaaccagtactcaagcacgccccatctctgtaagttactgataactttctcatgtgagagacaaatgataatgaaatcaatatcgcatatcaaacatcatggagattgtggccgggcggggattcgaactcacgaccactggattgacagtcagacatgctaacaactgaactaattaggcccagcttcattcaataagaagatgactatcttttgtcacattgtttggggattggaagggagataacccatcattgcacagttctatagcgcttacatataaat
gi|3 : aaataatttcccggacaaaccttatacttgtatacaatggattgcttaaacatactgaatctttatgtatgttgtttaggtacagtagatcatctctttttttttgtcaaacaatttgttgcaagtaaattgattgattgatTGAATATTTAGCATCA-T-TT--T--TGTTCCACCGAG-GGCTAA-CAG-ATG---ATCAGTTAAC-------C-TAA---CCACTGTT-TC-----CTA--GG-A--tgcgattctaaaatgttaaccagtactcaagcactagccatctccgcaaataactgacaacttccccacttgaatcagcggtgaaagacgaatgataatgagacacaatgtcatatatcaatcattatggagactgttgcataatccccggatttataatatggcgtgcaaccaactgagctaatcgggcccggcctgttgtgagtaaagaaatagaga
gi|17 : aaacggagtgatagaggcattcaatgaaaatgcagtataaagtaaagtatcaaaaataaaagtatattcaaatctaacaaccatttgatggcactgagttagttcacagcgtggatatggttatactgattaattgattgtttgatTGAATATTAAGCATCAAT-TT--T-ATG--CCATTGAG-GACTAA-CAG-ATG---ATCAGTTAAC-------C-TAA---CCATTCTT-TC-----CTG--TG-A--TCCTGGA-----------AGGTTAGCCTGTACTCAAGCATAT--CCAT--CTCCACAA-GTA-----TTT-GTTAAATT-TTTCACTT-GA-ATCAG--------CAGTGAGAGATGATTGATA-A----T--GAGATGCTATGTCTTA-T----ATCAATCATtcctgaaaggttaaccagaaatcaagcaaaaccagtctccgcaagtaactgataactttcccacttgaatcagcagtgaaaaacgaatgataatgagacacaatgtcttatatcaatcatcacggagactgttgccggcggggatttgacccttatatgaccactatacatccctacccatcagatagtccaaacttcagtcccttactcatgttcatgtagagatttgctatgatcagacaatgcattagacctcgattctcatacaaatggatacgaaaatgaaaaaaaatccaattttctaatatgatttcaatgtaaaatctcacatatatgaaaagcatttgaatataactggcctagtggtttcagagaaagtactgctaatggacaacacacaa
gi|16 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttatTGAATATTTAGCATCA-T-TTTAT-ATG--CCATCGAG-GGCT-A-catggagactgttgccgggcaggaattcaaactcactactctctgttgatagtcagacgtgctactgactgactgtaccaggcctgggttccaggtaaggattcatgactactt
gi|22 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatggttgattgattgatTGAATATTTAGCGTCA-T-TT--TTATG--CCATCGAG-GGCTAA-CAGAC----AATCAGTTCAC-------C-TAA---CCACTTTT-TC-----CTG--GG-A--accagtactcacgcacaccccatctctgcatgtaactgataactttcccatttaaatcagaggtgataaacgaatgataaagagatacaatgttgtatatcaatcatcacggaccttggattgataatcagacgcgtaacggactgagctaatcgggcccggcttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|15 : tgctgtttattaattgtttcttattgtctcaatacatgtgtgtagggaaatcccaatattttatatgaacctaattcaatttttatataaataatctatcatgtgttgttttctgaacagtcagaacgatgattgattgatAATATTTAGCATCATT-TT--T-ATG--CCATCGAG-GGCTAA-TAG-AGG---ATCAGTT---AT----TC-TA---TCCACTGTT-TC-----CTG--GG-A--tcctgaaagctaaaccagtactcgagcacaccccatcttcgcaaataactgattacaactttcctact
gi|16 : gtcagaccatcgctttgctttcttgagaaatccgcagaaaatgaggaaaatgattgattgactgattgatttTTAATAT----GCATCACTCCCAT------C-----TAG--TA-A--GCC-GGG-CCC--GAT-TAGCTCAGTCCGTTAC---GCGTCTGATTATCAATCCAAGG-tcctggtaggttaaccagtgttcgggaaatcccaatccccgtcccccacttgaatcagcgatgaaagacaaatgataatgagacacaatgacgtgtatcaatcatcccggagactgttgccaggtggggaattcgaacacacgatccctcgattgatagtcagacgcgtaaccgactgagccgatcggcccctgcttaaaatgaggaaaaggttaaaaaaagaggtaaaaacaacaatactgcttttacagtaaca
gi|36 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatggttgattgattgattgaatatttagcatcattttatatgccatcgagggctaaccagtactcacgcacaccccatctctgcatgtaactgataactttcccatttaaatcagaggtgataaacgaatgataaagagatacaatgttgtatatcaatcatcacggaAACCCCCATTCTTATTGG---CAG--GC-A--GC--TGAGCCT--GGT-TAGCTCATTTGGTAAT---GTGTCTGACTcataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|15 : TCCTCATTTTA-AG-----CAG--GG-G-----------CC--GAT-CGGCTCAGTCGGTTAC---GCGTCTGACTATCAATCGAGGG-ATC-----GTGTGTTCGAATTCCCCACCTGGC-AACAGTC-----TCCGG----GATGATTGATACA----C--GTCAT--TGTGTCTCATT----ATCATTTGTCTTTCATCGCTGATTCAAGTGGGGG--------------------ACGGGGATTGGGAT---TTCCCGAACA-C-T--GGTT-A-ACCTA---CCAG-GATCCCAGGAAAC-AGTGGATA-G------AATAACTGATCCTCTATTAGCCCTC--------------G-------------------------ATG---G-----------CATAAAAATGATGCTAAA-----------TATTAAA---TCAAT-CAGT-CAA------------T
gi|17 : gtcagaccatcgctttgctttcttgagaaatccgcagaaaatgaggaaaatgattgATCCTT-AC-----C-T--GG-A--ACCCAGG-CCT--GGTACAG-TCAGTCAGTAGC---ACGTCTGACTATCAA--CAGAGAGTA-----GTGAGTTTGAAT-TCCTGCCCGGC-AACAGTC-----TCCAT----GATGATTGATATA----A--GACAT--AGCATCTCATT----ATCAATCATCTCTCACTGCTGATTCAAGTGAAAAAT--TT---AACAAATACTTGTGGAGA-TGG-AT--ATGCTTGAGTA-C-A--GGCT-A-ACCTT---CCAG-GATCACAGGAAAG-AATGGTTA-G------GTTAACTGA--------------TC--------------aaaggttaaaaaaagaggtaaaaacaacaatactgcttttacagtaaca
gi|32 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttattgaatattaagcatcaattttatgccattgaggactaacagatATTTTT-TT-----TGT--GA-A--AT--GGC-TCCCAGGT-TAGCTGAGTCTGCAGT---GTGTCTAACTATCAATCCAGGG-Gtcatgactactt
gi|19 : gTTCTT-TCAGTCGCAC--GG-C--CC--GG--CCC--GAT-TAGCTCAGTCGGTTAC---ACGTCTGACTATCAATCCAGGG-GTC-----GTGAATTTGAAT-CCCCGCCCGGC-AACAGTC-------CAT----GATGATTGAAATA----C--GACAT--TGTGTCTCATT----ATCATTTGTCTTTCACCGCTGATTCAAGTGGGAAAG--TT---ATCAGTTACTTGCGGAGA-TGGGGT--GTGCTCAAGTA-C-T--GG-T-T-A-------------ATCCCAGGAAAT-AGTGGTTA-G------GTTAACTGATTGTCTGTTAGCCCTT--------------G-------------------------ATG---G-----------CATAAAAATGATGCTAAA-----------TATTCAA---TCAAT-CAAT-tacaataa
gi|20 : tcaaagaacttatcggcagcgactgaaagTTCTT-TC------AG--GATG--CC--GGG-TCT--GAT-TAGCGCAGTCGGTTAT---TCGTCTGACTATCAATCCAGGG-GTC-----GTGAGTTGGAAT-CCCCGCCCGGC-AACAGTC-----TCCTT----GATGATTGATAAA----A--GACAT--TGTGACTCATT----ATCATTTATCTCTCACCGCTGATaagaaaaatgcagagtatttacagagagaacgagatcgaataag
gi|27 : aTTTTT-TC-----TAG--C------C--GGG-TCT--GAC-TCGCGCTGTTGGTAAT---GCGTCTGTTTGTCAGTCCAatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagttaacggtcacatatgacagcggttagagataaatgataatgagtcacaatgtcgtatatcaatcatcacggagactgttgccgggcagggacttaaccaaagagactggtaggctactagtatattaaaatttc
gi|9 : acgattatTT-TC-----TAGCAGG-ATGCC--AGG-CCC--GAT-TAGCGCATTCGTTTAT---ACATCTGACTATCAATCCAGGG-GTC-----GTGAGTTGGAAT-CCCCGCCCGGC-AACAGTA-----TCTGT----GATGATTTATATA----C--AACAT--TGTGTCTCATT----ATCATTCGTCTCTCACCGCTGATTTAAGTGGGAAAG--TT---ATCAGTTACTTGCAGAGA-CGGGGT--GTGCTCGAGTA-C-T--GGTT-A-ACCTT---CAAG-GATCCCAGGAAGC-AGTGGTTA-T------GTTAACTGA--------------TC--------------G-------------------------aatgtagcgaatatcatagtacgaaa
gi|10 : catgtaatgccatcgagggctaacagaT-CC-----CAG--AG-ACAGCA-GGG-CCT--GAT-TAGCTCAGTCGTTAGC---GCGTCTGACTATCAATCCAAGG-GTC-----GTGAGTTTGAAT-CCCTGCCCAGT-CTGAATC-----CATGT----GATGGTTGATATA----T--GACAT--TG------------------------CTCACTGCTGATTCAAGTGGGAAAG--GT---ATAAGTTACTTGTGGAGA-TGGGGT--GTGCTCGATTA-C-T--AGTT-A-AACTT---CCAT-GATCCAAAGAAAC---TCGTTA-C------GTTAAtcaagctacatatgaagagagaaatggcatcttttttgtgactgtcaaaataagaaccagtttaagttaacgttcacgtatgacagtagatcatcatatttacatgtacacgtcgtatatgctgaagacatgctggtatatactggtacatatgttattgtaaaatgtggatt
gi|4 : tagtaaatatttgtttttataatgataaatgcataaattcatttataggcatgaaaatctagtctatgatattgttgaagccttataaaaggttataattagtccaagacttgctgtatatttgtcttgttacatggatatttctatgtctac-A--ACT-GGG-CCT--GTT-TAGCTCAGTTGGTTAC---ATGTCTGACTATCAAGCCAGGG-GTT-----GTGAGTTCGAAT-CCCCAAC-AGACAACAGTC-----CCCAT----GATAATTGATATA----C--GACAT--TGTGTCTCATT----ATCATTCATCTCTCACTACTGATTCAAGTGGGAAAG--TT---AACAGTAACTTGCAAAGA-TTGG-T--GTGCCCGAGGG-C-T--GGTT-A-ACC-A---TCAG-GATCCCAGGAAAC-AGTGGTTA-G------GTTAACTGA--------------TC--------------ttctacaccaaatactacaccttgaatatcaagttgaattttctttgggttacttaaaca
gi|23 : tacatatattcatatatttttttggttggtaacttgaaaacagttaatttcaaatacagtttccggttaaatatataaaagtattttcctctccattttttgtgcacttttacgagtaggtttgattgattgaatattttgcatcattttaatgccattgggggctaacagat-A--ACT-GGA-TCCT-GAG-TATCTCAGTCGGTAAC---GTTTCTTACAGTCACTCAATGG-GTCGCGGATTTAAATC-AAT-CCTTG-TCAGG-ATCtatgagtaggaagacatctgagaagtatttataagaaaagttttagcaaatttcatgagctaaaatatcctgttgtataagtgtatcagtgtatatgcaaccatgtcttgtttaggtgtatatttgctatgttattgtaaaagtgactt
gi|18 : atctctgcaagtcactgacttcttccccaagtcactgatttcttcctcatatagacactcctgagagattcgtggctacatatcataC--GGG-CCT--GGT-TAGCTCAGTCGGTTAC---GCGTCTGACTATCAATCCAGGG-GTC-----GTGAGTTCGAGT-CCCCGCCCGGC-AACAGTG-----TCCGT----GATGATTGATATA----C--GACAT--TGTGTTTCATA----ATCATTTGTCTCTGATCGCTAATTCAAGTGGGAAAG--TC---ATCAGCTACTTGCGGAGA-TGGGGT--GTGCTCGAGTA-C-T--GGTT-A-ACCTT---TCAG-GATCCCAGAAAAC-TGTGGTTA-G------GTTAACTGA--------------TC--------------GTCTGTTAGCGTTCGGTGGCATACAAATG---G-----------C-----------GCTAGA-----------TATTCAA---TCAAT-AAAT-gtgcataataaagattgttccaaatggcgatgagtatatatttc
gi|7 : aatttattgaatatgttgttgaagtatgtttcagttgggagC--GGG-CAC--GAT-GAGC-CGGTCAGTTAT---GCGTCTGACTATCAATCCAGGG-GTC-----GTGAGTTTGAAT-CCCCGCCCGAC-AGCATTC-----TCCTC----GATGACTGATATA----C--AACAT--TGTGTCGCATT----ATCATTCGTTTCTCACTGCTGGTTCAAGTGGGAAAG--TT---ATCAGTTACTTGCAGAAA-TGGGGT--GTCCTCGAGTA-T-T--GGTT-A-ACCTT---TCAG-GATCCCAGGAAAC-AGTGGTTA-G------GTTAACTGATCGTCTGTTAGCTCTC--------------G-------------------------ATG---GCATAAAAATAAC-----------GCTAAA-----------TATTCAA---TCAAT-CAAT-CAgcttttttgttgggggaatgttgttgattacaaatatacaca
gi|5 : aatttgatttctaatgagtgtgaacttaacctaagccatgaaaattgttttctcaatgcatcatctattttatcattataagcgtaataataaaatgaggccttaaattttgtataataatcaagttgagacatgtaC--GGA-TCC--GAT-AAGCTCAGTCGGTAAC---GCGTCTGACTATCAATTCAAGG-GTC-----TTGATTTCGAAT-CCCCTTCCGGC-AACAGTC-----ACCGT----GATGATTGATATA----C--AACAT--TGTGTCTCATT----ATCATTCGCCTCT-A-CACTGATTAAAGTGGAAAAG--TT---ATCAGTTACTTGCGGAGA-TGGGGT--GTGCTAAAGTG-T-T--GGTT-A-ACCTT---TCAG-GGTCCCAGGAAAC-AGTGGTTC-G------GTTAACTGA--------------TC--------------GACTGTTAGCCCTCGATGGCATAAAAATG---A-----------C-----------GCTTAA-----------TATTCAA---TCAAT-CAAT-ccatattatgtatgaattgatcatatatcatccctttagtaatggtaaatacggtcaaacctgtataagtggtca
gi|12 : aaataattacatacctatactatatcaaaagaatgcaattaaacataagctgacttgtctgtggaccagtatctaatttttaaagggaatgcaggatggatgtaacgtcattttaaaattgagC--GGG-CCC--GAT-TAGCTCAGTTGGTTGC---ACGCCATATTATAAATCCGGGG-ATT---------------AT-----GC----A-A-CAGTC-----TCCAT----AATGATTGATATA----T--GACAT--TGTGTCTCATT----ATCATTCGTCTTTCACCGCTGATTCAAGTGGGGAAG--TT---GTCAGTTATTTGCGGAGA-TGGCTA--GTGCTTGAGTA-C-T--GGTT-A-ACATT---TTAG-AATCGCAGGAAAC-AGTGGTTA-G------ATTAACTGA--------------TCGTCTGTTAGCCCATG-------------------------ATG---G-----------CATAAAAATGATGCTAAA-----------TATTCAA---TCAAT-CAAT-CAA------------TTgcttttgaaattgggatatataaatataattatgtttatggaagatttctatatctctcaaagcagattatataacatgtatacatgcaagcaagcattttgaatgtggtttaacgccattaataacac
gi|21 : aaataatttcccggacaaaccttatacttgtatacaatggattgcttaaacatactgaatctttatgtatgttgtttaggtacagtagatcatctctttttttttgtcaaacaatttgttgcaagtaC--GG--CCC--AAT-TAGCTTAGTCGGTAGT---GCGTCTAA--ATCAATTAAGGG-ATC-----GTGAGTTCGAAT-CCCCGTC----------------------------TGAT-----CA----C--AACAA--TTCGTCTCATT----GTC-TTCATCTCTCATACCTGATTAAGGTGGGATAG--TT---ATCAGTTAATT------------GT--GTGTTTGAGTA-C-T--GGCT-C-ATCTTCACCCGGTGATTCCAGGAAAT-AGTGGTTA-G------GTTAACTGA--------------TC--------------GT------------------------ATGCTAG-----------C-----------CC---------------TCTTAAATGTTCAAA-CAAgcctgttgtgagtaaagaaatagaga
gi|13 : taaagcggcacagagcaaagacttctgt--GGT-CCC--GGT-TAGCTCAGTCGGATAC---GCGTCTGACTATCAATCCAGGG-GTC-----ATGAGTTCAAAT-CTCCGCCCGGC-AAAAGAC-----TCCGT----GATGATTGATACA----C--AACAT--TGTGTC---TC----ATCATTCGTCTCTAACCACTGATTCGAGTGGGGAAG--TT---GTCAGTTACTTGCAGAGA-TGGGGT--GTGCTCGAGTA-C-A--GG-T-T-A-------------ATCCCAGGAAAC-AGTGGTTA-G------GTTAACTGA--------------TCGTCTGTTAGCCCTTG-------------------------ATG---G-----------CATAAAAATGATGCTAAA-----------TATTCAA---TCAAT-CAAT-CAA------------Tggctagatcaaagagtacattgagatcatagtcgtctagggacgtgtcacttattgt
gi|11 : cacaccaaatatgctgttctaccaaaaaaacgggcacaagatctctgaacttgctaaaccatcttgctaatataattg--GGG-CCT--AAT-TAGTTCAGTTGTTAGC---ATGTCTGACTGTCAATCCAGTG-GTC-----GTGAGTTCGAAT-CCCCGCCCGGC-CACAATC-----TCCAT----GATGTTTGATATG----C--GATAT--TG-ATTTCATT----ATCATTTGTCTCTCAC-----------ATGAGAAAG--TT---ATCAGTAACTTACAGAGA-TGGGGC--GTGCTTGAGTA-C-T--GGTT-A-ACCTT---TTAG-GATCCCAGGAAAC-AGTGGTTAGTGGTTAGGTTAACTGATCGTCTGCTAGCCTTC--------------G-------------------------ATG---G-----------C-----------ACAAAAATGACGCCAAATATTCAA---TCAAT-CAAT-TAcagcttgcttatataaataaaaaatatcaaaatgtcagccttagcactggcagaaatatagagaa
gi|14 : ggtggctttgctctctggaactgtaggagtaaaaattcatttaaGA-CCC--GGT-TAGCTCGGTCGGTAGT---GTGCCTGACTATCCATTCAGGG-ATA-----GGGAGTTCGAAT-CGCCGTTCGGC-AACAGTC-----TCCGT----GACGATTGATATAATTAT--GACAC--TGCGTCTCATT----ATCATTCGTCTCTCACCACTGATTCAAGTTGGAAAG--TT---ATCAGTTACTTGCGGATA-T-CGAT--GTGCTTGAATA-T-T--GGTT-A-ATCTT---TCAG-GATTCCAGAAAAG-AGTGGTTT-G------GTTAACTGA--------------Tagcttcattcaataagaagatgactatcttttgtcacattgtttggggattggaagggagataacccatcattgcacagttctatagcgcttacatataaat
gi|25 : actggagaaaaggacttgtaaccaaccccatcaaattgtttatagaagaatgtataaactacaataggatttattgaacacgtgattacgttagattgaagcgttacggatgatataacttattgtttgtttgaatatttagcgtcatatttatgccattgaggactaat--GGT-TAGCTCAGTCGGTAGT---GTATCaagctatat
gi|1 : actcttgcctgttcgggattcaaactggattAATTTGAAG-CC-CGCCCAGC-CACAATC-----TCCAC----GATGATTGATATA----TAGGACAT--TACATCTCATT----GTTATTTGTCTCTCATTGCTCTTTCAAGTGGGAATG--TT---ATCAATTCCTTTAGGAGA-TGG-------------GTA-TATAAGA-T-A-ACCT-----------TCCGAGGAAAG-AGAAGTT-------------GCTGA--------------TC--------------G-------------------------aagcacagttcaaattagtatcacaaaaaccatgaggtgttatttata
gi|3 : ctgaaataattaacatacagacttaccaatgttgcatatcctatctgatttatttgtttgtttgaatatttagcataatttttatgtcatcaagggaaaacagaTCAAAT-CCCCGCCGGCA-A-CAGTC-----TCCGT----GATGATTGATATA----A--GACAT--TGTGTCTCATT----ATCATTCGTTTTTCACTGCTGATTCAAGTGGGAAAG--TT---ATCAGTTACTTGCGGAGA-CTGGTT--TTGCTTGATTT-C-T--GGTT-A-ACCTT---TCAG-GATCCTAGGAAAC-AGTGGTTA-G------GTTAACTGA--------------TC--------------cagataggctaccaactcagctaaccatctcttgtcaggctaaatatttacaaaatgacaagaaaataatcaacatcttggttacctagtcaggcaaaattcacaagcaaccgacataagttgtatgttactttttaatgttttatactgtttttgaccttgcaaagtggtctttaatgaaaagcattgcagtttgaggcaaaccttccaaacgactttcttgtgttttttaacaatgacattgcagtatacaaattttgtaataaataaaagaaattaaaaatgcaattaaaaaacacaattatgacattgctctacatataaacgagataactgaaactaagataagtgaaggtgagattttcacgagactttgtacacaaata
gi|16 : aaacggagtgatagaggcattcaatgaaaatgcagtataaagtaaagtatcaaaaataaaagtatattcaaatctaacaaccatttgatggcactgagttagttcacagcgtggatatggttatactgattaattgattgtttgattgaatatttagcatcatttttgttccaccgagggctaacagat-ATCAATCCAAGGTCCGT----GATGATTGATATA----C--AACAT--TGTATCTCTTT----ATCATTCGTTTATCACCTCTGATTTAAATGGGAAAG--TT---ATCAGTTACATGCAGAGA-TGGGGT--GTGCGTGAGTA-C-T--GG-T-T-AGCCC---TC---GATGGCATATAA--AATG---A-T------GCTAA---A-------------------------------------------------------------------------------------------------------TATTCAA---TCAAT-CAAT-CAA------------cccttatatgaccactatacatccctacccatcagatagtccaaacttcagtcccttactcatgttcatgtagagatttgctatgatcagacaatgcattagacctcgattctcatacaaatggatacgaaaatgaaaaaaaatccaattttctaatatgatttcaatgtaaaatctcacatatatgaaaagcatttgaatataactggcctagtggtttcagagaaagtactgctaatggacaacacacaa
gi|2 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatggCAT--TGCGTCTCATTGAGTATCATTCAACTATCTCTGCTACTTCA--TGAGAAAATGTT---ATCATTTACATGC-------GGGGC--GTGTTCGAGCA-C-C--GG-------------TCA-------CAGCAATT-AGTTGTTA-A------GTTAACTGG--------------TT--------------G-------------------------aatcagacgcgtaacggactgagctaatcgggcccggcttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|22 : agtattacaaataatttatataccgatatattctttttttattgataaactcagattttgaagttcatctgcagtatttatagagacatgtacttttgaaacactaaacacatagccaatggttttaaaagtgtcctgtttccatgatagatattcctctgttagtccaaatatgcaggaaaaatatatggttggcaagatttttttttctcacaaattcaatggtttgctgacaccgcttcatatttgacaattctgcccatttgttgcagtttatctttacgcatctttacactgctatttctgcatccaacactttccaatgtcatccaaacgtgacagaactaatgaaaatgttcaaatatgtacaaagaaatatgaccattttaagcaatttcaacaaaaacatatcaatcgatatacaaagcatgtgtgcatttatgcttgatttgattgtttgaatatttagcgtcaatttttgccatggagggctaaaaggAGTAGGAAAG--TTGTAATCAGTTATTTGCGAAGA-TGGGGT--GTGCTCGAGTA-C-T--GG-T-TTAGCTT---TCAG-GATCCCAGGAAAA-AGTGGTTA-G------GTGAACTGATTGTCTGTTAGCCCTC--------------G-------------------------ATG---GCATAAAAATGAC-----------GCTAAA-----------TATTCAA---TCAAT-CAAT-CAgattgatagtaaggtgtcac
gi|41 : tgctgtttattaattgtttcttattgtctcaatacatgtgtgtagggaaatcccaatattttatatgaacctaattcaatttttatataaataatctatcatgtgttgttttctgaacagtcagaacgaCAGCTACATGCAAAGA-TGG-AT--GTGCTCGAGTA-C-TCAGG-T-A-ACCTT---T
gi|31 : TATGGAGA-T---ATTTGTGCTGGAGTT-C-T--AG-TTA-ACTTT---CCAG-AATTCCAG-AAACGAGTTGTTA-T------GTTGACTGG--------------T
gi|44 : GGAGA--GGGAT--GTGCTCGAGTACT-C--GT-T-A-ACCT-----------TCCCAGAAAAactct
gi|5 : A--------------TC--------------G-------------------------A-G---G-----------------------GC---------------TAA-CAG---TCGAT-CAGT-TAACCGAACCACTGTTTCCTGGGACCCT--GAA--AGGTTAACCAACACTT----TAGCAC-A---C-------------CCCA-T--CTCCG-------CAAGTAAC---TG--A--T-----------AACT--TTTCCACTTTAATC---A-----GT--GTAGAGGC-----------GAATGA-TAATGAGACACAATGT--TGTAT----ATCAATCATCACGGTG---ACTGTTGCCGGAAGGGG-ATTCGAAtg
gi|14 : aaataattacatacctatactatatcaaaagaatgcaattaaacataagctgacttgtctgtggaccagtatctaatttttaaagggaatgcaggatggatgtaacgtcattttaaaattgagattgattgattgaatattaagcgtcatttttatgccTTAA---CCAAA-CCAC-TCT------------TTTCTGGAATCCT--GAA--AGATTAACCAATATTC----AAGCAC-A---T-------------CG-A-T--ATCCG-------CAAGTAAC---TG--A--T-----------AACT--TTCCAACTTGAATCAGTG-----GT--G-AGAGAC-----------GAATGA-TAATGAGACGCAGTGT--CATAATTATATCAATCGTCACGGAG---ACTGTTGCCGAACGGCG-ATTCGAACTatcaagacccttgaattgatagtcagacgcgttaccgactgagcttatcggatccggcttttgaaattgggatatataaatataattatgtttatggaagatttctatatctctcaaagcagattatataacatgtatacatgcaagcaagcattttgaatgtggtttaacgccattaataacac
gi|19 : actggagaaaaggacttgtaaccaaccccatcaaattgtttatagaagaatgtataaactacaataggatttattgaacacgtgattacgttagattgaagcgttacggatgatataacttattgtttgtttgaatatttagcgtcatatttatgccattgaggactaatatcagCAA---TCAGT-TAACCTAACCACTAT-----TTCCTGGGATT--------------AACCAGTACTT----GAGCAC-A---C-------------CCCA-T--CTCCG-------CAAGTAAC---TG--A--T-----------AACT--TTCCCACTTGAATCAGCG-----GT--G-AAAGAC-----------AAATGA-TAATGAGACACAATGT--CGTAT----TTCAATCAT--CATGG---ACTGTTGCCGGGCGGGG-ATTCAAATTCACGAccctatccctgaatggatagtcaggcacactaccgaccgagctaaccgggtcaagctatat
gi|12 : tcaaagaacttatcggcagcgactgaaagattgattgattgaatatttagcatcatttttatgccatcaagggctaacagaCGA---TCAGT-TAATCTAACCACTGT-----TTCCTGCGATTCT--AAA--ATGTTAACCAGTACTC----AAGCACTA---G-------------CC-A-T--CTCCG-------CAAATAAC---TG--A--C-----------AACT--TCCCCACTTGAATCAGCG-----GT--G-AAAGAC-----------GAATGA-TAATGAGACACAATGT--CATAT----ATCAATCATTATGGAG---ACTGTTGCcccctggattgatagtcagacgtgtaaccgactgagctaatcgggccgggccgtgcgactgaaagaaaagaaaaatgcagagtatttacagagagaacgagatcgaataag
gi|22 : aaataatttcccggacaaaccttatacttgtatacaatggattgcttaaacatactgaatctttatgtatgttgtttaggtacagtagatcatctctttttttttgtcaaacaatttgttgcaagtaaattgattgattgattgaatatttagcatcatttttatgccatcatgggctaacagaCAA---TCAGTTCACC-TAACCACTTT-----TTCCTGGGATCCT--GAA--AGCTAAACCAGTACTC----GAGCAC-AC--C-------------CC-A-T--CTataatccccggatttataatatggcgtgcaaccaactgagctaatcgggcccggcctgttgtgagtaaagaaatagaga
gi|15 : tgctgtttattaattgtttcttattgtctcaatacatgtgtgtagggaaatcccaatattttatatgaacctaattcaatttttatataaataatctatcatgtgttgttttctgaacagtcagaacgatgattgattgattgaatatttagcgtcatttttatgccatcgagggctaacaga---TCTAT-CCAC-TGT------------TTCCTGGGATCCT--GGT--AGGTTAACCAGTGTTCGGGAAATCCC-AATCC-------------CC-G-TCCCCCAC-------T----------TG--AATC-----------AG----C----------------G-----AT--G-AAAGAC-----------AAATGA-TAATGAGACACAATGA--CGTGT----ATCAATCATCCCGGAG---ACTGTTGCCAGGTGGGGAATTCGAACACACGATtcgcaaataactgattacaactttcctact
gi|21 : gtcagaccatcgctttgctttcttgagaaatccgcagaaaatgaggaaaatgattgattgactgattgatttaatatttagcatcatttttatgccatcgagggctaatagaggatcagttatAC-TAT------------TTCCTGGAATCACCGGGTGAAGATGAGCCAGTACTC----AAACAC-A---CAATTAACTGATAACT-A-T--CCCAC-------C----------T------T-----------AATC--A----------------G-----GTATG-AGAGAT-----------GAA-GA-CAATGAGACGAATTGT--TGT---------GATCA---------------------GACGGGG-ATTCGAACTCACGATccctcgattgatagtcagacgcgtaaccgactgagccgatcggcccctgcttaaaatgaggaaaaggttaaaaaaagaggtaaaaacaacaatactgcttttacagtaaca
gi|18 : taaagcggcacagagcaaagacttctgtttgtttgaacatttaagagggctagcatacgatcagttaacctaacc------------TTTCTGGGATCCT--GAA--AGGTTAACCAGTACTC----GAGCAC-A---C-------------CCCA-T--CTCCG-------CAAGTAGCTGATG--A--CTTTCCCACTTGAATTAGC----------------G-----AT--C-AGAGAC-----------AAATGA-TTATGAAACACAATGT--CGTAT----ATCAATCATCACGGAC---ACTGTTGCCGGGCGGGG-ACTCGAACTCACGAcccttaattgatttagacgcactaccgactaagctaattgggccgggctagatcaaagagtacattgagatcatagtcgtctagggacgtgtcacttattgt
gi|9 : aatttattgaatatgttgttgaagtatgtttcagttgggagatttattgattgaatatctagcgccatttgtatgccaccgaacgctaacagacgatcagttaacctaaccacagt------------TTCCTGGGATCCT--TGA--AGGTTAACCAGTACTC----GAGCAC-A---C-------------CCCG-T--CTCTG-------CAAGTAAC---TG--A--T-----------AACT--TTCCCACTTAAATCAGCG-----GT--G-AGAGAC-----------GAATGA-TAATGAGACACAATGT--TGTAT----ATAAATCATCACAGAT---ACTGTTGCCGGGCGGGG-ATTCCAACTCACGAcccctggattgatagtcagacgcgtaaccgactgagctaaccaggcccggcttttttgttgggggaatgttgttgattacaaatatacaca
gi|7 : catgtaatgccatcgagggctaacagacgatcagttaacataaccactgc------------TTCCTGGGATCCT--GAA--AGGTTAACCAATACTC----GAGGAC-A---C-------------CCCA-T--TTCTG-------CAAGTAAC---TG--A--T-----------AACT--TTCCCACTTGAACCAGCA-----GT--G-AGAAAC-----------GAATGA-TAATGCGACACAATGT--TGTAT----ATCAGTCATCGAGGAGAATGCTGTC---GGGCGGGG-ATTCAAACTCACGAcccctggattgatagtcagatgtataaacgaatgcgctaatcgggcctggcatcctgctagaaatcaagctacatatgaagagagaaatggcatcttttttgtgactgtcaaaataagaaccagtttaagttaacgttcacgtatgacagtagatcatcatatttacatgtacacgtcgtatatgctgaagacatgctggtatatactggtacatatgttattgtaaaatgtggatt
gi|13 : aatttgatttctaatgagtgtgaacttaacctaagccatgaaaattgttttctcaatgcatcatctattttatcattataagcgtaataataaaatgaggccttaaattttgtataataatcaagttgagacatgtatgattgattgattgaatatttagcgttatttttatgccatcgagagctaacagacgatcagttaacctaaccactgt------------TTCCTGGGATT--------------AACCTGTACTC----GAGCAC-A---C-------------CCCA-T--CTCTG-------CAAGTAAC---TG--A--C-----------AACT--TCCCCACTCGAATCAGTG-----GT--T-AGAGAC-----------GAATGA-T---GAGACACAATGT--TGTGT----ATCAATCATCACGGAG---TCTTTTGCCGGGCGGAG-ATTTGAACTCATGAcccctggattgatagtcagacgcataactgaccggctcatcgtgcccgccatattatgtatgaattgatcatatatcatccctttagtaatggtaaatacggtcaaacctgtataagtggtca
gi|4 : cacaccaaatatgctgttctaccaaaaaaacgggcacaagatctctgaacttgctaaaccatcttgctaatataattgattgattgattgattgaatatttagcatcatttttatgccatcaagggctaacagacgatcagttaacctaaccactgt------------TTCCTGGGATCCT--GAT--GGTT-AACCAGCCCTC----GGGCAC-A---C-------------CA-A-T--CTTTG-------CAAGTTACTGTTA--A--CTTTCCCACTTGAATCAGT----------------A-----GT--G-AGAGAT-----------GAATGA-TAATGAGACACAATGT--CGTAT----ATCAATTATCATGGGG---ACTGTTGTCTGTTGGGG-ATTCGAACTCACAAcccctggattgatagtcagacgcgtatccgactgagctaaccgggacccagcttgcttatataaataaaaaatatcaaaatgtcagccttagcactggcagaaatatagagaa
gi|11 : tacatatattcatatatttttttggttggtaacttgaaaacagttaatttcaaatacagtttccggttaaatatataaaagtattttcctctccattttttgtgcacttttacgagtaggtttgattgattgaatattttgcatcattttaatgccattgggggctaacagatgatcagttaacctaaccactgt------------TTCCTGGGATCCT--AAA--AGGTTAACCAGTACTC----AAGCAC-G---C-------------CCCA-T--CTCTGTAAGTTAC----------TG--A--T-----------AACT--T----------------TCTCATGT--G-AGAGAC-----------AAATGA-TAATGAAAT-CAATAT--CGCAT----ATCAAACATCATGGAG---ATTGTGGCCGGGCGGGG-ATTCGAACTCACGAcccctggcttgatagtcagacatgtaaccaactgagctaaacaggcccagtttatgagtaggaagacatctgagaagtatttataagaaaagttttagcaaatttcatgagctaaaatatcctgttgtataagtgtatcagtgtatatgcaaccatgtcttgtttaggtgtatatttgctatgttattgtaaaagtgactt
gi|3 : ggtggctttgctctctggaactgtaggagtaaaaattcatttaataattgattgattgaatatttggcgtcatttttgtgccatcgaaggctagcagacgatcagttaacctaaccactaaccactgt------------TTCCTAGGATCCT--GAA--AGGTTAACCAGAAATC----AAGCAA-A---A-------------CC-AGT--CTCCG-------CAAGTAAC---TG--A--T-----------AACT--TTCCCACTTGAATCAGCA-----GT--G-AAAAAC-----------GAATGA-TAATGAGACACAATGT--CTTAT----ATCAATCATCACGGAG---ACTGTTGCC-GGCGGGG-ATTTGAccactggattgacagtcagacatgctaacaactgaactaattaggcccagcttcattcaataagaagatgactatcttttgtcacattgtttggggattggaagggagataacccatcattgcacagttctatagcgcttacatataaat
gi|17 : aaacggagtgatagaggcattcaatgaaaatgcagtataaagtaaagtatcaaaaataaaagtatattcaaatctaacaaccatttgatggcactgagttagttcacagcgtggatatggttatactgattaattgattgtttgattgaatatttagcatcatttttgttccaccgagggctaacagatgatcagttaacctaaccactgt------------TTCCTGTGATCCT--GGA--AGGTTAGCCTGTACTC----AAGCAT-A---T-------------CC-A-T--CTCCA-------CAAGTATT---TGTTA--------------AATT--TTTCACTTGAATCAGC-A-----GT--G-AGAGAT-----------GATTGA-TAATGAGATGCTATGT--CTTAT----ATCAATCATCATGGAG---ACTGTTGCCGGGCAGGA-ATTCAAACTcccttatatgaccactatacatccctacccatcagatagtccaaacttcagtcccttactcatgttcatgtagagatttgctatgatcagacaatgcattagacctcgattctcatacaaatggatacgaaaatgaaaaaaaatccaattttctaatatgatttcaatgtaaaatctcacatatatgaaaagcatttgaatataactggcctagtggtttcagagaaagtactgctaatggacaacacacaa
gi|10 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttattgaatattaagcatcaattttatgccattgaggactaacagatgatcagttaacctaaccattct------------TTCTTTGGATCAT--GGA--AGTTTAACTAGTAATC----GAGCAC-A---C-------------CCCA-T--CTCCA-------C----------AA--G--T-----------AACT--T------------------------------ATACCTTTCCCACTTGAATCAGCAGTGA---GCAATGT--CATAT----ATCAACCATCACATGG---ATTCAGACTGGGCAGGG-ATTCAAACTCACGAcactactctctgttgatagtcagacgtgctactgactgactgtaccaggcctgggttccaggtaaggattcatgactactt
gi|16 : tagtaaatatttgtttttataatgataaatgcataaattcatttataggcatgaaaatctagtctatgatattgttgaagccttataaaaggttataattagtccaagacttgctgtatatttgtcttgttacatggatatttctatgtctacttaacgtaacgagtTAACCAGTACTC----ACGCAC-A---C-------------CCCA-T--CTCTG-------CATGTAAC---TG--A--T-----------AACT--TTCCCATTTAAATCAGAG-----GT--G-ATAAAC-----------GAATGA-TAAAGAGATACAATGT--TGTAT----ATCAATCATCACcccttggattgatagtcagacgcgctaacgactgagctaatcaggccctgctgtctctgggattctacaccaaatactacaccttgaatatcaagttgaattttctttgggttacttaaaca
gi|20 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatggttgattgattgattgaatatttagcatcattttatatgccatcgagggc----------TG--A--C-----------AGC--------------------G-----GT--T-AGAGAT-----------AAATGA-TAATGAGTCACAATGT--CGTAT----ATCAATCATCACGGAG---ACTGTTGCCGGGCAGGG-ACTTAAggaccttggattgataatcagacgcgtaacggactgagctaatcgggcccggcttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|1 : aatcagcggtgagagataaatgataatgagtcacaatgtcttttatcaatcatcaaggagactgttgccgggcggggattccaactcacgacccctggattgatagtcagacgaataaccgactgcgctaatcagacccggcatcctgaaagaaatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagttaacggtcacataT--G-AGAGAC-----------AAATAA-CAATGAGATGTAATGTCCTATAT----ATCAATCATCGTGGAG---ATTGTGGCTGGGC-GGG-CTTCAAATTccaaagagactggtaggctactagtatattaaaatttc
17 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|8 ): AAAAAAAAACTATATTTGCTTATCATAACTACATAAACATGCAATAGAAACATCCATGTCAAGTTTCAGTTGAATTGGCCTAGTGGTTTCAGAGAAAGTGCTGCTAACAGACGACAGACGACGGATAACGCGCAATCATAAAAGCTCTTCTGGCCAAAAAAAAGGCTTATGTAATTTGGTTTTGAAATATTTCAAAATGGTTCATAATGCTTGTGATTTCTTGCTGCAGATGAGTAGAACAAAAGTTGGCATGGCATATACTGCAATAAGACATCACTGGTGTCAAGAAAGTGAATTTTATAAGAATTCAATATATGCATTTATTGATGAGCATTCATTTTTCAAAAAATCTCAGGGTTCACTGCACCCCTTTAAAACAAGAGGCCCAAGAGGGCCTGAGGACGCTCTACTGACTCATAGTGGCCATAGCACTTTTTGAAATTCTACTATGCAATAGAAAT
Unaligned ( gi|24 ): ACTCCCTACCCTTGGATTAATGCTCAGATTGCTACCAACTGAACTGATAAGACTGCGAGTTGTGTTTGAAAATAATTTGTTTTTATTTTGATACAGTTGTTTGAGGCAATT
Unaligned ( gi|26 ): ACATATATTCGTTTTTGTAGGTAAATTGAAAACAGTTAATTTCAAATACAGTCTCTGGTTAAATATATAAAAGTATTTTTCTCTCCATTTTTTGTGCACT
Unaligned ( gi|28 ): TGACCGCCATTTTTCCAAACAGGTTTGATTTGTTTGAATAAAATGCGTCATTTTATGCCATCGGGTGTTAACATTTGATCATCT
Unaligned ( gi|29 ): TGAGAAGTATTCATAGGACAATTTTTAGCAAATTCCATGTGCTGAAATCTCCTGTTGTATAAGTGTATTAGTGTAGGCGCAAC
Unaligned ( gi|30 ): CAGGCGGGGATGGGACCGCATGACCCAAAGATTTACAGCCAGAAGCGCTACTGAGCTAGCCGGAACAGGCTTAATATAT
Unaligned ( gi|33 ): TAAACAATATATAACATCAAGAGAAACAACCGGTATTACATCTAAATAGCGTGTTTTTGGAACGTTTTTAT
Unaligned ( gi|34 ): TTAAAAGTCACAACCCTTAGTCAGGATTGATAGTCAGACCCGCTGACAGTTGACCAGGACAGGCTG
Unaligned ( gi|35 ): AGGATGACAAAACTTGTTTGTTTGAATGCTTAGTGTCATGTTATGACATCAAGGGATAATATGC
Unaligned ( gi|37 ): GTTTGTTGGAATATTTAACATAATTTTTATGCCAAAGAGAATGATGATCATC
Unaligned ( gi|38 ): TGTTTGTTAGAATATTTAGCGTCATTTTTATGCCCCATGGATTGATAGTCA
Unaligned ( gi|39 ): TATTAAGCATCATCGTTTTATGCCAGCAAGTGCCAACAGACAATTTTAGT
Unaligned ( gi|40 ): AATTGATTGTTTGAATTTGTTTAAATATTTAGCATCATTTTTATGACA
Unaligned ( gi|42 ): ATATTTAGCATCATTTTTTTTTTGCCATAAAGGGTTAACAGTCTAT
Unaligned ( gi|43 ): TGTTTGTTTGAATATTTAGCATGATTTTTGTGCCATAAAACAAAAC
Unaligned ( gi|45 ): AGTCCTTTATGATGCAGTTGAGATAAGATAATCCAATG
Unaligned ( gi|46 ): GCATCATTTTATGCCATCGGATGTTAACATTTGAT
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 3333333333333333333333333333333333
lowQualScore : 2222 111 222 222 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 444444444 1 4 2222222222222222222222222222222222 222 22 11 11
lowQualScore : 1 1 0000 888 0 1 444 333 333 0 1 1 77777777 4 1 2 44444 1 1 2 4444 22 4444 22 5 4444 22 333 2 22 555555 1 6666666 2 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 333 2 33 666666666 6 6 5 0 3333333333333333333333333333333333 6 6 6 333 11 6 6 6 22 22
lowQualScore : . . .... ... . . ... ... ... . . . ........ . . . ..... . . . .... .. .... .. . .... .. ... . .. ...... . ....... . ............................................................................................................................. ... . .. ......... . . . . .................................. . . . ... .. . . . .. ..
lowQualScore : 4 4 6666 888 7 0 000 333 333 7 0 0 55555555 2 6 1 22222 7 8 2 2222 88 2222 88 4 0000 66 333 5 55 999999 9 5555555 0 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 999 4 44 000000000 0 0 0 0 0000000000000000000000000000000000 0 0 0 000 00 0 0 0 00 00
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---CTAA---CCATTCTTTCCNG--GGAC--C-GGGCCCGAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATATA----C--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACA-CCCATCTCGG-------CTGACAATTT---------------GGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGAT
Reference ( family-355 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---CTAA---CCACTNTTTCCNG--GGAN--C-GGGCCCGAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATATA----C--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATCCTGAAAGGTTAACCAGTACTCGAGCACACCCCATCTCCGCAAGTAACTGATAACTTTCCCACTTGAATCAGGGTGAGAGACGAATGATAATGAGACGCAATGTCGTATATCAATCATCACGGAGACTGTTGCCGGGCGGGGATTCGAACTCACGAT
gi|1 : GGT-TAGCTGAGTTGGTAGC--------CTATC-------------------TGAATTTGAAG-CCC-GCCCAGCCACAATC----TCC--ACGATGATTGATATA----TAGGACATTACATCTCATT----GTTATTTGTCTCTCATTGCTCTTTCAAGTGGGAAT--GTT---ATCAATTCCTTTAGGAGAT-GGGTAT------ATA----AGATAACCT-----------TCCGAGGAAAG-------AG-----AAGTT-GCT-GA--------------T--------------CGTCTGTTTTCCCTTG-------------------------A-------------------------TG---A-----------CATAAAAATTATGC---TAAATATTCAAACAAAC-AA--
gi|10 : ctgaaataattaacatacagacttaccaatgttgcatatcctatctgatttat-GGGCCTGAT-TAGCTCAGTCGTTAGCGCGTCTGACTATCAATCC-----AAGG-GTCGTGAGTTTGAAT-CCCTGCC------CAGTCTGAATCCATGTGATGGTTGATATA----T--GACATTG------------------------CTCACTGCTGATTCAAGTGGGAAA--GGT---ATAAGTTACTTGTGGAGATGGGGTGTGCTCGATTACT--AGTTAAACTTC---CAT-GATCCAAAGAAAC---------TCGTTACGTTAAGTAGA--------------C-------------------------------------------------------A-------------------------TA---G-----------------------------AAATATCCAatctcttgtcaggctaaatatttacaaaatgacaagaaaataatcaacatcttggttacctagtcaggcaaaattcacaagcaaccgacataagttgtatgttactttttaatgttttatactgtttttgaccttgcaaagtggtctttaatgaaaagcattgcagtttgaggcaaaccttccaaacgactttcttgtgttttttaacaatgacattgcagtatacaaattttgtaataaataaaagaaattaaaaatgcaattaaaaaacacaattatgacattgctctacatataaacgagataactgaaactaagataagtgaaggtgagattttcacgagactttgtacacaaata
gi|11 : tagtaaatatttgtttttataatgataaatgcataaattcatttataggcatgaaaatctagtctatgatattgttgaagccttataaaaggttataattagtccaagacttgctgtatatttgtcttgttaca-GGGCCTAAT-TAGTTCAGTTGTTAGCATGTCTGACTGTCAATCC-----AGTG-GTCGTGAGTTCGAAT-CCCCGCCCGGCCACAATC----TCC--ATGATGTTTGATATG----C--GATATTG-ATTTCATT----ATCATTTGTCTCTCAC-----------ATGAGAAA--GTT---ATCAGTAACTTACAGAGATGGGGCGTGCTTGAGTACT--GGTTAACCTTT---TAG-GATCCCAGGAAACAGTGGTTAGTGGTTAGGTTAACT-GA--------------T--------------C--------------GTCTGCTAGCCTTCGATGGCACAAAAA-------------------------TG---A-----------C-----------GC---CAAATATTCAATCAATC-AA--TTAtgctgtctctgggattctacaccaaatactacaccttgaatatcaagttgaattttctttgggttacttaaaca
gi|12 : ggtggctttgctctctggaactgtaggagtaaaaattcatttaaGGC--C-GGGCCCGAT-TAGCTCAGTTGGTTGCACGCCATATTATAAATCC-----GGGG-ATTATG--------------------CAACAGTC----TCC--ATAATGATTGATATA----T--GACATTGTGTCTCATT----ATCATTCGTCTTTCACCGCTGATTCAAGTGGGGAA--GTT---GTCAGTTATTTGCGGAGATGGCTAGTGCTTGAGTACT--GGTTAACATTT---TAG-AATCGCAGGAAAC-------AGTGGTTAGATTAACT-GA--------------T--------------CGTCTGTTAGCCCATG-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCAATTagcttcattcaataagaagatgactatcttttgtcacattgtttggggattggaagggagataacccatcattgcacagttctatagcgcttacatataaat
gi|13 : aaataatttcccggacaaaccttatacttgtatacaatggattgcttaaacatactgaatctttatgtatgttgtttaggtacagtagatcatctctttttttttgtcaaacaatttgttgcaagta-GGTCCCGGT-TAGCTCAGTCGGATACGCGTCTGACTATCAATCC-----AGGG-GTCATGAGTTCAAAT-CTCCGCCCGGCAAAAGAC----TCC--GTGATGATTGATACA----C--AACATTGTGTCTC-------ATCATTCGTCTCTAACCACTGATTCGAGTGGGGAA--GTT---GTCAGTTACTTGCAGAGATGGGGTGTGCTCGAGTACA--GGTTA--------------ATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------CGTCTGTTAGCCCTTG-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCAATtgttgtgagtaaagaaatagaga
gi|14 : cacaccaaatatgctgttctaccaaaaaaacgggcacaagatctctgaacttgctaaaccatcttgctaatataattgGACCCGGT-TAGCTCGGTCGGTAGTGTGCCTGACTATCCATTC-----AGGG-ATAGGGAGTTCGAAT-CGCCGTTCGGCAACAGTC----TCC--GTGACGATTGATATAATTAT--GACACTGCGTCTCATT----ATCATTCGTCTCTCACCACTGATTCAAGTTGGAAA--GTT---ATCAGTTACTTGCGGATAT-CGATGTGCTTGAATATT--GGTTAATCTTT---CAG-GATTCCAGAAAAG-------AGTGGTTTGGTTAACT-GATATTAGTCC-----T--------------C--------------A-------------------------A-------------------------TG---GCATAAATATGAC-----------GC---TAAATATTCAAACAAAC-AA--TAAGTTcagcttgcttatataaataaaaaatatcaaaatgtcagccttagcactggcagaaatatagagaa
gi|15 : actggagaaaaggacttgtaaccaaccccatcaaattgtttatagaagaatgtataaactacaataggatttattgaacacgtgattacgttagattgaagcgttacggatgatat-GGGGCCGAT-CGGCTCAGTCGGTTACGCGTCTGACTATCAATCG-----AGGG-ATCGTGTGTTCGAATTCCCCACCTGGCAACAGTC----TCC--GGGATGATTGATACA----C--GTCATTGTGTCTCATT----ATCATTTGTCTTTCATCGCTGATTCAAGTGGGGGA--------------------CGGGGATTGGGATTTCCCGAACACT--GGTTAACCTAC---CAG-GATCCCAGGAAAC-------AGTGGATAGAATAACT-GATCCTCTATTAGCCCT--------------C--------------G-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTAAATCAATC-AG--TCAATaagctatat
gi|16 : gtcagaccatcgctttgctttcttgagaaatccgcagaaaatgaggaaaatgattg----TCC--GTGATGATTGATATA----C--AACATTGTATCTCTTT----ATCATTCGTTTATCACCTCTGATTTAAATGGGAAA--GTT---ATCAGTTACATGCAGAGATGGGGTGTGCGTGAGTACT--GGTTAGCCCTC-------GAT----GG---C-------A-----TA---TAA-------------------------------------------------A-------------------------A-------------------------TG---A-----------T-----------GC---TAAATATTCAATCAATC-AA--TCAAtgcttaaaatgaggaaaaggttaaaaaaagaggtaaaaacaacaatactgcttttacagtaaca
gi|16 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatgg--C-GGGCCCGAT-TAGCTCAGTCCGTTACGCGTCTGATTATCAATCC-----AAGG-TCCGTGAccttggattgataatcagacgcgtaacggactgagctaatcgggcccggcttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|17 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatggttgattgattgattgaatatttagcatcattttatatgccatcgagggctaaccagtactcacgcacaccccatctctgcatgtaactgataactttcccatttaaatcagaggtgataaacgaatgataaagagatacaatgttgtatatcaatcaTGAATATTAAGCATCAA---T---TTTATGCCATTGAGGACTAACAGATG---ATCAGTTAAC---CTAA---CCATTCTTTCCTG--TGAT--C-gcttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|17 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttatTTACCTG--GAAC--CCAGGCCTGGTACAG-TCAGTCAGTAGCACGTCTGACTATCAA--C-----AGAGAGTAGTGAGTTTGAAT-TCCTGCCCGGCAACAGTC----TCC--ATGATGATTGATATA----A--GACATAGCATCTCATT----ATCAATCATCTCTCACTGCTGATTCAAGTGAAAAA--TTT---AACAAATACTTGTGGAGAT-GGATATGCTTGAGTACA--GGCTAACCTTC---CAG-GATCACAGGAAAG-------AATGGTTAGGTTAACT-GA--------------T--------------C--------------ctggaaggttagcctgtactcaagcatatccatctccacaagtatttgttaaatttttcacttgaatcagcagtgagagatgattgataatgagatgctatgtcttatatcaatcatcatggagactgttgccgggcaggaattcaaactcactactctctgttgatagtcagacgtgctactgactgactgtaccaggcctgggttccaggtaaggattcatgactactt
gi|18 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttattgaatattaagcatcaattttatgccattgaggactaacagat--C-GGGCCTGGT-TAGCTCAGTCGGTTACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAGT-CCCCGCCCGGCAACAGTG----TCC--GTGATGATTGATATA----C--GACATTGTGTTTCATA----ATCATTTGTCTCTGATCGCTAATTCAAGTGGGAAA--GTC---ATCAGCTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGAAAAC-------TGTGGTTAGGTTAACT-GA--------------T--------------C--------------GTCTGTTAGCGTTCGGTGGCATACAAA-------------------------TG---G-----------C-----------GC---TAGATATTCAATCAATA-AA--TCggattcatgactactt
gi|19 : aatttattgaatatgttgttgaagtatgtttcagttgggaGGCCCGAT-TAGCTCAGTCGGTTACACGTCTGACTATCAATCC-----AGGG-GTCGTGAATTTGAAT-CCCCGCCCGGCAACAGTC------C--ATGATGATTGAAATA----C--GACATTGTGTCTCATT----ATCATTTGTCTTTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCAAGTACT--GGTTA--------------ATCCCAGGAAAT-------AGTGGTTAGGTTAACT-GATTGTCTGTTAGCCCT--------------T--------------G-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCgcttttttgttgggggaatgttgttgattacaaatatacaca
gi|2 : tcaaagaacttatcggcagcgactgaaaCATTGCGTCTCATTGAGTATCATTCAACTATCTCTGCTACTTCA--TGAGAAAATGTT---ATCATTTACATGC------GGGGCGTGTTCGAGCACC--GGTCA------------------CAGCAATT-------AGTTGTTAAGTTAACT-GG--------------T--------------T--------------GCCTTTTAGCCCTCC-----------A-------------------------TG---GCAAAAATTGA-C-----------GC---TAAATATTCAAACAATCAAA--TCAAgggccgtgcgactgaaagaaaagaaaaatgcagagtatttacagagagaacgagatcgaataag
gi|20 : agtattacaaataatttatataccgatatattctttttttattgataaactcagattttgaagttcatctgcagtatttatagagacatgtacttttgaaacactaaacacatagccaatggttttaaaagtgtcctgtttccatgatagatattcctctgttagtccaaatatgcaggaaaaatatatggttggcaagatttttttttctcacaaattcaatggtttgctgacaccgcttcatatttgacaattctgcccatttgttgcagtttatctttacgcatctttacactgctatttctgcatccaacactttccaatgtcatccaaacgtgacagaactaatgaaaatgttcaaatatgtacaaagaaatatgaccattttaagcaatttcaacaaaaacatatcaatcgatatacaaagcatgtgtgcatttatgcTCTTTCAGG--ATGC--C-GGGTCTGAT-TAGCGCAGTCGGTTATTCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTGGAAT-CCCCGCCCGGCAACAGTC----TCC--TTGATGATTGATAAA----A--GACATTGTGACTCATT----ATCATTTATCTCTCACCGCTGATTgattgatagtaaggtgtcac
gi|20 : AGT-CCCTGCCCGGCAACAGTC----TCC--GTGATGATTGATATA----C--GACATTGTGACTCATT----ATCATTTATCTCTAACCGCTG--TCATATGTGACC--GTT---Aaatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagttaacggtcacatatgacagcggttagagataaatgataatgagtcacaatgtcgtatatcaatcatcacggagactgttgccgggcagggacttaaccaaagagactggtaggctactagtatattaaaatttc
gi|21 : aatcagcggtgagagataaatgataatgagtcacaatgtcttttatcaatcatcaaggagactgttgccgggcggggattccaactcacgacccctggattgatagtcagacgaataaccgactgcgctaatcagacccggcatcctgaaagaaatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagtGGCCCAAT-TAGCTTAGTCGGTAGTGCGTCTAA--ATCAATTA-----AGGG-ATCGTGAGTTCGAAT-CCCCGTC----------------------------TGAT-CA----C--AACAATTCGTCTCATT----GTC-TTCATCTCTCATACCTGATTAAGGTGGGATA--GTT---ATCAGTTAATTG-----------TGTGTTTGAGTACT--GGCTCATCTTCACCCGGTGATTCCAGGAAAT-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------GT------------------------A-------------------------TGCTAG-----------C-----------CCTCTTAAATGTTCAAACAAAC-Ataaccaaagagactggtaggctactagtatattaaaatttc
gi|22 : taaagcggcacagagcaaagacttcAGTAGGAAA--GTTGTAATCAGTTATTTGCGAAGATGGGGTGTGCTCGAGTACT--GGTTTAGCTTT---CAG-GATCCCAGGAAAA-------AGTGGTTAGGTGAACT-GATTGTCTGTTAGCCCT--------------C--------------G-------------------------A-------------------------TG---GCATAAAAATGAC-----------GC---TAAATATTCAATCAATC-AA--TCAgggctagatcaaagagtacattgagatcatagtcgtctagggacgtgtcacttattgt
gi|23 : tgctgtttattaattgtttcttattgtctcaatacatgtgtgtagggaaatcccaatattttatatgaacctaattcaatttttatataaataatctatcatgtgttgttttctgaacagtcagaacgaCCTGAG-TATCTCAGTCGGTAACGTTTCTTACAGTCACTCA-----ATGG-GTCGCGGATTTAAAT-C
gi|25 : atctctgcaagtcactgacttcttccccaagtcactgatttcttcctcatatagacactcctgagagattcgtggctacatatcatagatcctgacaaggatt--GAAC--T-GTGCTTGGT-TAGCTCAGTCGGTAGTG--------TATCAATCC----------------AGTTTGAAT-CCCGAACAGGCAAGAGTatccagttgtgcataataaagattgttccaaatggcgatgagtatatatttc
gi|27 : TTTTTCTAG-----C--C-GGGTCTGAC-TCGCGCTGTTGGTAATGCGTCTGTTTGTCAGTCC-----AATA-ATCGTaaattagtatcacaaaaaccatgaggtgttatttata
gi|28 : GCGTCA----T---TTTATGCCATCGGGTGTTAACATTTG---ATCAaaatgtagcgaatatcatagtacgaaa
gi|3 : tgaccgccatttttccaaacaggtttgatttgtttgaataaaatTCAAAT-CCCCGCC-GGCAACAGTC----TCC--GTGATGATTGATATA----A--GACATTGTGTCTCATT----ATCATTCGTTTTTCACTGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGACTGGTTTTGCTTGATTTCT--GGTTAACCTTT---CAG-GATCCTAGGAAAC-------AGTGGTTAGGTTAACT-GATCATCTGTTAGCCCT--------------C--------------G-------------------------G-------------------------TG---GAACAAAAATGAT-----------GC---TAAATATTCAATCAAAC-AA--TCAATTtct
gi|30 : aaacggagtgatagaggcattcaatgaaaatgcagtataaagtaaagtatcaaaaataaaagtatattcaaatctaacaaccatttgatggcactgagttagttcacagcgtggatatggttatactgattCCGGC-TAGCTCAGTAG----CGCTTCTGGCTGTAAATCT-----TTGG-GTCATGCGGTCCCAT-CCCCGCCTGcccttatatgaccactatacatccctacccatcagatagtccaaacttcagtcccttactcatgttcatgtagagatttgctatgatcagacaatgcattagacctcgattctcatacaaatggatacgaaaatgaaaaaaaatccaattttctaatatgatttcaatgtaaaatctcacatatatgaaaagcatttgaatataactggcctagtggtttcagagaaagtactgctaatggacaacacacaa
gi|32 : CCAGGT-TAGCTGAGTCTGCAGTGTGTCTAACTATCAATCC-----AGGG-Gaacaggcttaatatat
gi|34 : gCCTGGT-CAACT--GTCAG---CGGGTCTGACTATCAATCCTGACTAAGG-GTTGTGACTTgagccatttcacaaaaaaaattacaataa
gi|36 : ttaaCAG--GCAG--CTGAGCCTGGT-TAGCTCATTTGGTAATGTGTCTGACTacaggctg
gi|38 : aacccccattcttattggGAATATTTAGCGTCAT---T---TTTATGCC
gi|39 : tgtttgttaTATTAAGCATCA----TCGTTTTATGCCAGCAAGTGCCAACAGACA---ATccatggattgatagtca
gi|4 : AC--T-GGGCCTGTT-TAGCTCAGTTGGTTACATGTCTGACTATCAAGCC-----AGGG-GTTGTGAGTTCGAAT-CCCCAACAGACAACAGTC----CCC--ATGATAATTGATATA----C--GACATTGTGTCTCATT----ATCATTCATCTCTCACTACTGATTCAAGTGGGAAA--GTT---AACAGTAACTTGCAAAGAT-TGGTGTGCCCGAGGGCT--GGTTAACC-AT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------TCATCTGTTAGCCCCC--------------A-------------------------A-------------------------TG---G-----------CATTAAAATGATGC---AAAATATTCAATCAATC-AA--tttagt
gi|41 : tacatatattcatatatttttttggttggtaacttgaaaacagttaatttcaaatacagtttccggttaaatatataaaagtattttcctctccattttttgtgcacttttacgagtaggtCAGCTACATGCAAAGATGGA-TGTGCTCGAGTACTCAGG-TAACCTTT---ttatgagtaggaagacatctgagaagtatttataagaaaagttttagcaaatttcatgagctaaaatatcctgttgtataagtgtatcagtgtatatgcaaccatgtcttgtttaggtgtatatttgctatgttattgtaaaagtgactt
gi|42 : ATATTTAGCATCATTTTT---TTTTTGCCATAAAGGGTTAACAG
gi|44 : GGAGA-GGGATGTGCTCGAGTACT--CGTTAACCT-----------TCCCAGAAAAtctat
gi|46 : GCATCA----T---TTTATGCCATCGGATGTTAACAtg
gi|5 : --C-GGATCCGAT-AAGCTCAGTCGGTAACGCGTCTGACTATCAATTC-----AAGG-GTCTTGATTTCGAAT-CCCCTTCCGGCAACAGTC----ACC--GTGATGATTGATATA----C--AACATTGTGTCTCATT----ATCATTCGCCTCT-A-CACTGATTAAAGTGGAAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTAAAGTGTT--GGTTAACCTTT---CAG-GGTCCCAGGAAAC-------AGTGGTTCGGTTAACT-GA--------------T--------------C--------------G-------------------------ACTGTTAGCCCTCGATGGCATAAAAATG---A-----------C-----------GC---TTAATATTCAATCAATC-AATCTCAATTtttgat
gi|6 : aaataattacatacctatactatatcaaaagaatgcaattaaacataagctgacttgtctgtggaccagtatctaatttttaaagggaatgcaggatggatgtaacgtcattttaaTGAGTATTTAACATCA----T---TCTATGCCATCCATGACTA-CAGCTGTAAATCAATTAACATACTAATCCCCATTCTTTCCAG--GGAA--C-GGACCCGAT-TAGCTCAGTCGGTAATGCGTCTGACTATTACTCC-----AGGG-GTCTTCAGTTCGAAT-CCTCGCCCAGAATCAGTC----TCC--GTGGTGATTGATATA----C--GACATTGTGTCTTATT----ATCATTCGTTTCTCACCGCTGATCCAAGTGGGAAA--ATT---ACCAGTTACTTACGGAGATGGGACGTGCTCGAGTATT--GG-TAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTATGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC-------TATTCAATCAATC-AA--TTAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACA-CCCATCTCGG-------CTGACAATTT---------------GGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGATgcttttgaaattgggatatataaatataattatgtttatggaagatttctatatctctcaaagcagattatataacatgtatacatgcaagcaagcattttgaatgtggtttaacgccattaataacac
gi|7 : tatgtcggcgttagtactaatctgacagaaa--C-GGGCACGAT-GAGC-CGGTCAGTTATGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTTGAAT-CCCCGCCCGACAGCATTC----TCC--TCGATGACTGATATA----C--AACATTGTGTCGCATT----ATCATTCGTTTCTCACTGCTGGTTCAAGTGGGAAA--GTT---ATCAGTTACTTGCAGAAATGGGGTGTCCTCGAGTATT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GATCGTCTGTTAGCTCT--------------C--------------G-------------------------A-------------------------TG---GCATAAAAATAAC-----------GC---TAAATATTCAATCAATC-AA--TCAgatatgtcttggttgt
gi|9 : aatttgatttctaatgagtgtgaacttaacctaagccatgaaaattgttttctcaatgcatcatctattttatcattataagcgtaataataaaatgaggccttaaattttgtataataatcaagttgagacatgtaCA----T---GTAATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---ATAA---CCACTGCTTCCTG--GGAT--C-ccatattatgtatgaattgatcatatatcatccctttagtaatggtaaatacggtcaaacctgtataagtggtca
gi|9 : TTTCTAGCAGGATGCC-AGGCCCGAT-TAGCGCATTCGTTTATACATCTGACTATCAATCC-----AGGG-GTCGTGAGTTGGAAT-CCCCGCCCGGCAACAGTA----TCT--GTGATGATTTATATA----C--AACATTGTGTCTCATT----ATCATTCGTCTCTCACCGCTGATTTAAGTGGGAAA--GTT---ATCAGTTACTTGCAGAGACGGGGTGTGCTCGAGTACT--GGTTAACCTTC---AAG-GATCCCAGGAAGC-------AGTGGTTATGTTAACT-GA--------------T--------------C--------------G-------------------------cttgaaggttaaccagtactcgagcacaccccgtctctgcaagtaactgataactttcccacttaaatcagcggtgagagacgaatgataatgagacacaatgttgtatataaatcatcacagatactgttgccgggcggggattccaactcacgacccctggattgatagtcagatgtataaacgaatgcgctaatcgggcctggcatcctgctagaaatcaagctacatatgaagagagaaatggcatcttttttgtgactgtcaaaataagaaccagtttaagttaacgttcacgtatgacagtagatcatcatatttacatgtacacgtcgtatatgctgaagacatgctggtatatactggtacatatgttattgtaaaatgtggatt
11 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AAAAAAAAACTATATTTGCTTATCATAACTACATAAACATGCAATAGAAACATCCATGTCAAGTTTCAGTTGAATTGGCCTAGTGGTTTCAGAGAAAGTGCTGCTAACAGACGACAGACGACGGATAACGCGCAATCATAAAAGCTCTTCTGGCCAAAAAAAAGGCTTATGTAATTTGGTTTTGAAATATTTCAAAATGGTTCATAATGCTTGTGATTTCTTGCTGCAGATGAGTAGAACAAAAGTTGGCATGGCATATACTGCAATAAGACATCACTGGTGTCAAGAAAGTGAATTTTATAAGAATTCAATATATGCATTTATTGATGAGCATTCATTTTTCAAAAAATCTCAGGGTTCACTGCACCCCTTTAAAACAAGAGGCCCAAGAGGGCCTGAGGACGCTCTACTGACTCATAGTGGCCATAGCACTTTTTGAAATTCTACTATGCAATAGAAAT
Unaligned ( gi|24 ): ACTCCCTACCCTTGGATTAATGCTCAGATTGCTACCAACTGAACTGATAAGACTGCGAGTTGTGTTTGAAAATAATTTGTTTTTATTTTGATACAGTTGTTTGAGGCAATT
Unaligned ( gi|26 ): ACATATATTCGTTTTTGTAGGTAAATTGAAAACAGTTAATTTCAAATACAGTCTCTGGTTAAATATATAAAAGTATTTTTCTCTCCATTTTTTGTGCACT
Unaligned ( gi|29 ): TGAGAAGTATTCATAGGACAATTTTTAGCAAATTCCATGTGCTGAAATCTCCTGTTGTATAAGTGTATTAGTGTAGGCGCAAC
Unaligned ( gi|31 ): TATGGAGATATTTGTGCTGGAGTTCTAGTTAACTTTCCAGAATTCCAGAAACGAGTTGTTATGTTGACTGGTACTCT
Unaligned ( gi|33 ): TAAACAATATATAACATCAAGAGAAACAACCGGTATTACATCTAAATAGCGTGTTTTTGGAACGTTTTTAT
Unaligned ( gi|35 ): AGGATGACAAAACTTGTTTGTTTGAATGCTTAGTGTCATGTTATGACATCAAGGGATAATATGC
Unaligned ( gi|37 ): GTTTGTTGGAATATTTAACATAATTTTTATGCCAAAGAGAATGATGATCATC
Unaligned ( gi|40 ): AATTGATTGTTTGAATTTGTTTAAATATTTAGCATCATTTTTATGACA
Unaligned ( gi|43 ): TGTTTGTTTGAATATTTAGCATGATTTTTGTGCCATAAAACAAAAC
Unaligned ( gi|45 ): AGTCCTTTATGATGCAGTTGAGATAAGATAATCCAATG
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 2222 111 2222222222222 11111 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555
lowQualScore : 1 1 0000 888 0 111 6 2222222222222 3 55 44444 1 8888888 22 3 1 1 1 2 44444 1 1 2 4444 22 4444 22 5 4444 22 333 2 22 555555 1 6666666 2 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 333 2 33
lowQualScore : . . .... ... . ... . ............. . .. ..... . ....... .. . . . . . ..... . . . .... .. .... .. . .... .. ... . .. ...... . ....... . ............................................................................................................................. ... . ..
lowQualScore : 4 4 6666 888 7 777 5 8888888888888 6 00 11111 0 1111111 66 6 7 6 6 1 22222 7 8 2 2222 88 2222 88 4 0000 66 333 5 55 999999 9 5555555 0 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 999 4 44
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---CT-AA---C-CATTCTT-T--C-----CNG--GGA--C--C-GGG-CCC-GAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATA----TAC--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGAT
Reference ( family-355 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---CT-AA---C-CATTCTT-T--C-----CNG--GGA--C--C-GGG-CCC-GAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATA----TAC--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGAT
gi|1 : -GGT-TAGCTGAGTTGGTAGC--------CTATC-------------------TGAATTTGAAG-CCC-GCCCAGCCACAATC----TCC--ACGATGATTGATA----TATAGGACATTACATCTCATT----GTTATTTGTCTCTCATTGCTCTTTCAAGTGGGAAT--GTT---ATCAATTCCTTTAGGAGAT-GGGTAT------ATA----AGATAACCT-----------TCCGAGGAAAG-------AG-----AAGTT-GCT-GA--------------T--------------CGTCTGTTTTCCCTTG-------------------------A-------------------------TG---A-----------CATAAAAATTATGC---TAAATATTCAAACAAAC-AA--
gi|10 : ctgaaataattaacatacagacttaccaatgttgcatatcctatctgatttatT-C--C-----CAG--AGA--CAGCAGGG-CCT-GAT-TAGCTCAGTCGTTAGCGCGTCTGACTATCAATCC-----AAGG-GTCGTGAGTTTGAAT-CCCTGCC------CAGTCTGAATCCATGTGATGGTTGATA----TAT--GACATTG------------------------CTCACTGCTGATTCAAGTGGGAAA--GGT---ATAAGTTACTTGTGGAGATGGGGTGTGCTCGATTACT--AGTTAAACTTC---CAT-GATCCAAAGAAAC---------TCGTTACGTTAAGTAGA--------------C-------------------------------------------------------A-------------------------TA---G-----------------------------AAATATCCAatctcttgtcaggctaaatatttacaaaatgacaagaaaataatcaacatcttggttacctagtcaggcaaaattcacaagcaaccgacataagttgtatgttactttttaatgttttatactgtttttgaccttgcaaagtggtctttaatgaaaagcattgcagtttgaggcaaaccttccaaacgactttcttgtgttttttaacaatgacattgcagtatacaaattttgtaataaataaaagaaattaaaaatgcaattaaaaaacacaattatgacattgctctacatataaacgagataactgaaactaagataagtgaaggtgagattttcacgagactttgtacacaaata
gi|11 : tagtaaatatttgtttttataatgataaatgcataaattcatttataggcatgaaaatctagtctatgatattgttgaagccttataaaaggttataattagtccaagacttgctgtatatttgtcttgttaca--C--T-GGG-CCT-AAT-TAGTTCAGTTGTTAGCATGTCTGACTGTCAATCC-----AGTG-GTCGTGAGTTCGAAT-CCCCGCCCGGCCACAATC----TCC--ATGATGTTTGATA----TGC--GATATTG-ATTTCATT----ATCATTTGTCTCTCAC-----------ATGAGAAA--GTT---ATCAGTAACTTACAGAGATGGGGCGTGCTTGAGTACT--GGTTAACCTTT---TAG-GATCCCAGGAAACAGTGGTTAGTGGTTAGGTTAACT-GA--------------T--------------C--------------GTCTGCTAGCCTTCGATGGCACAAAAA-------------------------TG---A-----------C-----------GC---CAAATATTCAATCAATC-AA--TTAttctacaccaaatactacaccttgaatatcaagttgaattttctttgggttacttaaaca
gi|12 : ggtggctttgctctctggaactgtaggagtaaaaattcatttaaGG--C--C-GGG-CCC-GAT-TAGCTCAGTTGGTTGCACGCCATATTATAAATCC-----GGGG-ATTATG--------------------CAACAGTC----TCC--ATAATGATTGATA----TAT--GACATTGTGTCTCATT----ATCATTCGTCTTTCACCGCTGATTCAAGTGGGGAA--GTT---GTCAGTTATTTGCGGAGATGGCTAGTGCTTGAGTACT--GGTTAACATTT---TAG-AATCGCAGGAAAC-------AGTGGTTAGATTAACT-GA--------------T--------------CGTCTGTTAGCCCATG-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCAATTcttcattcaataagaagatgactatcttttgtcacattgtttggggattggaagggagataacccatcattgcacagttctatagcgcttacatataaat
gi|13 : aaataatttcccggacaaaccttatacttgtatacaatggattgcttaaacatactgaatctttatgtatgttgtttaggtacagtagatcatctctttttttttgtcaaacaatttgttgcaagta--C--T-GGGTCCC-GGT-TAGCTCAGTCGGATACGCGTCTGACTATCAATCC-----AGGG-GTCATGAGTTCAAAT-CTCCGCCCGGCAAAAGAC----TCC--GTGATGATTGATA----CAC--AACATTGTGTCTC-------ATCATTCGTCTCTAACCACTGATTCGAGTGGGGAA--GTT---GTCAGTTACTTGCAGAGATGGGGTGTGCTCGAGTACA--GGTTA--------------ATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------CGTCTGTTAGCCCTTG-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCAATtgttgtgagtaaagaaatagaga
gi|14 : cacaccaaatatgctgttctaccaaaaaaacgggcacaagatctctgaacttgctaaaccatcttgctaatataattgGA-CCC-GGT-TAGCTCGGTCGGTAGTGTGCCTGACTATCCATTC-----AGGG-ATAGGGAGTTCGAAT-CGCCGTTCGGCAACAGTC----TCC--GTGACGATTGATATAATTAT--GACACTGCGTCTCATT----ATCATTCGTCTCTCACCACTGATTCAAGTTGGAAA--GTT---ATCAGTTACTTGCGGATAT-CGATGTGCTTGAATATT--GGTTAATCTTT---CAG-GATTCCAGAAAAG-------AGTGGTTTGGTTAACT-GATATTAGTCC-----T--------------C--------------A-------------------------A-------------------------TG---GCATAAATATGAC-----------GC---TAAATATTCAAACAAAC-AA--TAAGTTcttgcttatataaataaaaaatatcaaaatgtcagccttagcactggcagaaatatagagaa
gi|15 : actggagaaaaggacttgtaaccaaccccatcaaattgtttatagaagaatgtataaactacaataggatttattgaacacgtgattacgttagattgaagcgttacggatgatat-GGG-GCC-GAT-CGGCTCAGTCGGTTACGCGTCTGACTATCAATCG-----AGGG-ATCGTGTGTTCGAATTCCCCACCTGGCAACAGTC----TCC--GGGATGATTGATA----CAC--GTCATTGTGTCTCATT----ATCATTTGTCTTTCATCGCTGATTCAAGTGGGGGA--------------------CGGGGATTGGGATTTCCCGAACACT--GGTTAACCTAC---CAG-GATCCCAGGAAAC-------AGTGGATAGAATAACT-GATCCTCTATTAGCCCT--------------C--------------G-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTAAATCAATC-AG--TCAATaagctatat
gi|16 : gtcagaccatcgctttgctttcttgagaaatccgcagaaaatgaggaaaatgattg----TCC--GTGATGATTGATA----TAC--AACATTGTATCTCTTT----ATCATTCGTTTATCACCTCTGATTTAAATGGGAAA--GTT---ATCAGTTACATGCAGAGATGGGGTGTGCGTGAGTACT--GGTTAGCCCTC-------GAT----GG---C-------A-----TA---TAA-------------------------------------------------A-------------------------A-------------------------TG---A-----------T-----------GC---TAAATATTCAATCAATC-AA--TCAAtgcttaaaatgaggaaaaggttaaaaaaagaggtaaaaacaacaatactgcttttacagtaaca
gi|16 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatgg--C--C-GGG-CCC-GAT-TAGCTCAGTCCGTTACGCGTCTGATTATCAATCC-----AAGG-TCCGTGAccttggattgataatcagacgcgtaacggactgagctaatcgggcccggcttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|17 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatggttgattgattgattgaatatttagcatcattttatatgccatcgagggctaaccagtactcacgcacaccccatctctgcatgtaactgataactttcccatttaaatcagaggtgataaacgaatgataaagagatacaatgttgtatatcaatcaTGAATATTAAGCATCAA---T---TTTATGCCATTGAGGACTAACAGATG---ATCAGTTAAC---CT-AA---C-CATTCTT-T--C-----CTG--TGA--T--C-cttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|17 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttatATCCTT-A--C-----CTG--GAA--C--CCAGG-CCT-GGTACAG-TCAGTCAGTAGCACGTCTGACTATCAA--C-----AGAGAGTAGTGAGTTTGAAT-TCCTGCCCGGCAACAGTC----TCC--ATGATGATTGATA----TAA--GACATAGCATCTCATT----ATCAATCATCTCTCACTGCTGATTCAAGTGAAAAA--TTT---AACAAATACTTGTGGAGAT-GGATATGCTTGAGTACA--GGCTAACCTTC---CAG-GATCACAGGAAAG-------AATGGTTAGGTTAACT-GA--------------T--------------C--------------ctggaaggttagcctgtactcaagcatatccatctccacaagtatttgttaaatttttcacttgaatcagcagtgagagatgattgataatgagatgctatgtcttatatcaatcatcatggagactgttgccgggcaggaattcaaactcactactctctgttgatagtcagacgtgctactgactgactgtaccaggcctgggttccaggtaaggattcatgactactt
gi|18 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttattgaatattaagcatcaattttatgccattgaggactaacagat--C--C-GGG-CCT-GGT-TAGCTCAGTCGGTTACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAGT-CCCCGCCCGGCAACAGTG----TCC--GTGATGATTGATA----TAC--GACATTGTGTTTCATA----ATCATTTGTCTCTGATCGCTAATTCAAGTGGGAAA--GTC---ATCAGCTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGAAAAC-------TGTGGTTAGGTTAACT-GA--------------T--------------C--------------GTCTGTTAGCGTTCGGTGGCATACAAA-------------------------TG---G-----------C-----------GC---TAGATATTCAATCAATA-AA--TCtcatgactactt
gi|19 : aatttattgaatatgttgttgaagtatgtttcagttgggaTTCTT-T--CAGTCGCAC--GGC--C--C-GG--CCC-GAT-TAGCTCAGTCGGTTACACGTCTGACTATCAATCC-----AGGG-GTCGTGAATTTGAAT-CCCCGCCCGGCAACAGTC------C--ATGATGATTGAAA----TAC--GACATTGTGTCTCATT----ATCATTTGTCTTTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCAAGTACT--GGTTA--------------ATCCCAGGAAAT-------AGTGGTTAGGTTAACT-GATTGTCTGTTAGCCCT--------------T--------------G-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCcttttttgttgggggaatgttgttgattacaaatatacaca
gi|2 : tcaaagaacttatcggcagcgactgaaaCATTGCGTCTCATTGAGTATCATTCAACTATCTCTGCTACTTCA--TGAGAAAATGTT---ATCATTTACATGC------GGGGCGTGTTCGAGCACC--GGTCA------------------CAGCAATT-------AGTTGTTAAGTTAACT-GG--------------T--------------T--------------GCCTTTTAGCCCTCC-----------A-------------------------TG---GCAAAAATTGA-C-----------GC---TAAATATTCAAACAATCAAA--TCAAaagaaaaatgcagagtatttacagagagaacgagatcgaataag
gi|20 : agtattacaaataatttatataccgatatattctttttttattgataaactcagattttgaagttcatctgcagtatttatagagacatgtacttttgaaacactaaacacatagccaatggttttaaaagtgtcctgtttccatgatagatattcctctgttagtccaaatatgcaggaaaaatatatggttggcaagatttttttttctcacaaattcaatggtttgctgacaccgcttcatatttgacaattctgcccatttgttgcagtttatctttacgcatctttacactgctatttctgcatccaacactttccaatgtcatccaaacgtgacagaactaatgaaaatgttcaaatatgtacaaagaaatatgaccattttaagcaatttcaacaaaaacatatcaatcgatatacaaagcatgtgtgcatttatgcTTCTT-T--C-----AGG--ATG--C--C-GGG-TCT-GAT-TAGCGCAGTCGGTTATTCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTGGAAT-CCCCGCCCGGCAACAGTC----TCC--TTGATGATTGATA----AAA--GACATTGTGACTCATT----ATCATTTATCTCTCACCGCTGATTgattgatagtaaggtgtcac
gi|20 : AGT-CCCTGCCCGGCAACAGTC----TCC--GTGATGATTGATA----TAC--GACATTGTGACTCATT----ATCATTTATCTCTAACCGCTG--TCATATGTGACC--GTT---Aatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagttaacggtcacatatgacagcggttagagataaatgataatgagtcacaatgtcgtatatcaatcatcacggagactgttgccgggcagggacttaaccaaagagactggtaggctactagtatattaaaatttc
gi|21 : aatcagcggtgagagataaatgataatgagtcacaatgtcttttatcaatcatcaaggagactgttgccgggcggggattccaactcacgacccctggattgatagtcagacgaataaccgactgcgctaatcagacccggcatcctgaaagaaatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagtAGACG---ACTA--TGAT---CTCAA---TGTACTCTT-TGAT-----CTA--G----C--C-CGG-CCC-AAT-TAGCTTAGTCGGTAGTGCGTCTAA--ATCAATTA-----AGGG-ATCGTGAGTTCGAAT-CCCCGTC----------------------------TGAT-----CAC--AACAATTCGTCTCATT----GTC-TTCATCTCTCATACCTGATTAAGGTGGGATA--GTT---ATCAGTTAATTG-----------TGTGTTTGAGTACT--GGCTCATCTTCACCCGGTGATTCCAGGAAAT-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------GT------------------------A-------------------------TGCTAG-----------C-----------CCTCTTAAATGTTCAAACAAAC-Ataaccaaagagactggtaggctactagtatattaaaatttc
gi|22 : taaagcggcacagagcaaagacttcAGTAGGAAA--GTTGTAATCAGTTATTTGCGAAGATGGGGTGTGCTCGAGTACT--GGTTTAGCTTT---CAG-GATCCCAGGAAAA-------AGTGGTTAGGTGAACT-GATTGTCTGTTAGCCCT--------------C--------------G-------------------------A-------------------------TG---GCATAAAAATGAC-----------GC---TAAATATTCAATCAATC-AA--TCAagggacgtgtcacttattgt
gi|23 : tgctgtttattaattgtttcttattgtctcaatacatgtgtgtagggaaatcccaatattttatatgaacctaattcaatttttatataaataatctatcatgtgttgttttctgaacagtcagaacgaA--C--T-GGA-TCCTGAG-TATCTCAGTCGGTAACGTTTCTTACAGTCACTCA-----ATGG-GTCGCGGATTTAAAT-C
gi|25 : atctctgcaagtcactgacttcttccccaagtcactgatttcttcctcatatagacactcctgagagattcgtggctacatatcatagatcctgacaaggatt--GAA--C--T-GTG-CTT-GGT-TAGCTCAGTCGGTAGTG--------TATCAATCC----------------AGTTTGAAT-CCCGAACAGGCAAGAGTtgtgcataataaagattgttccaaatggcgatgagtatatatttc
gi|27 : TTTTT-T--C-----TAG-------C--C-GGG-TCT-GAC-TCGCGCTGTTGGTAATGCGTCTGTTTGTCAGTCC-----AATA-ATCGTaaattagtatcacaaaaaccatgaggtgttatttata
gi|28 : GCGTCA----T---TTTATGCCATCGGGTGTTAACATTTG---ATCAaatgtagcgaatatcatagtacgaaa
gi|3 : tgaccgccatttttccaaacaggtttgatttgtttgaataaaatTCAAAT-CCCCGCC-GGCAACAGTC----TCC--GTGATGATTGATA----TAA--GACATTGTGTCTCATT----ATCATTCGTTTTTCACTGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGACTGGTTTTGCTTGATTTCT--GGTTAACCTTT---CAG-GATCCTAGGAAAC-------AGTGGTTAGGTTAACT-GATCATCTGTTAGCCCT--------------C--------------G-------------------------G-------------------------TG---GAACAAAAATGAT-----------GC---TAAATATTCAATCAAAC-AA--TCAATTtct
gi|30 : aaacggagtgatagaggcattcaatgaaaatgcagtataaagtaaagtatcaaaaataaaagtatattcaaatctaacaaccatttgatggcactgagttagttcacagcgtggatatggttatactgattCC-GGC-TAGCTCAGTAG----CGCTTCTGGCTGTAAATCT-----TTGG-GTCATGCGGTCCCAT-CCCCGCCTGcccttatatgaccactatacatccctacccatcagatagtccaaacttcagtcccttactcatgttcatgtagagatttgctatgatcagacaatgcattagacctcgattctcatacaaatggatacgaaaatgaaaaaaaatccaattttctaatatgatttcaatgtaaaatctcacatatatgaaaagcatttgaatataactggcctagtggtttcagagaaagtactgctaatggacaacacacaa
gi|32 : -CCA-GGT-TAGCTGAGTCTGCAGTGTGTCTAACTATCAATCC-----AGGG-Gaacaggcttaatatat
gi|34 : g-CCT-GGT-CAACT--GTCAG---CGGGTCTGACTATCAATCCTGACTAAGG-GTTGTGACTTgagccatttcacaaaaaaaattacaataa
gi|36 : ttaaAAC---CC------C-CATTCTTAT--TGG---CAG--GCAG-C--T-GAG-CCT-GGT-TAGCTCATTTGGTAATGTGTCTGACTacaggctg
gi|38 : GAATATTTAGCGTCAT---T---TTTATGCC
gi|39 : tgtttgttaTATTAAGCATCA----TCGTTTTATGCCAGCAAGTGCCAACAGACA---ATccatggattgatagtca
gi|4 : A--C--T-GGG-CCT-GTT-TAGCTCAGTTGGTTACATGTCTGACTATCAAGCC-----AGGG-GTTGTGAGTTCGAAT-CCCCAACAGACAACAGTC----CCC--ATGATAATTGATA----TAC--GACATTGTGTCTCATT----ATCATTCATCTCTCACTACTGATTCAAGTGGGAAA--GTT---AACAGTAACTTGCAAAGAT-TGGTGTGCCCGAGGGCT--GGTTAACC-AT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------TCATCTGTTAGCCCCC--------------A-------------------------A-------------------------TG---G-----------CATTAAAATGATGC---AAAATATTCAATCAATC-AA--tttagt
gi|41 : tacatatattcatatatttttttggttggtaacttgaaaacagttaatttcaaatacagtttccggttaaatatataaaagtattttcctctccattttttgtgcacttttacgagtaggtCAGCTACATGCAAAGATGGA-TGTGCTCGAGTACTCAGG-TAACCTTT---ttatgagtaggaagacatctgagaagtatttataagaaaagttttagcaaatttcatgagctaaaatatcctgttgtataagtgtatcagtgtatatgcaaccatgtcttgtttaggtgtatatttgctatgttattgtaaaagtgactt
gi|42 : ATATTTAGCATCATTTTT---TTTTTGCCATAAAGGGTTAACAG
gi|44 : GGAGA-GGGATGTGCTCGAGTACT--CGTTAACCT-----------TCCCAGAAAAtctat
gi|46 : GCATCA----T---TTTATGCCATCGGATGTTAACAtg
gi|5 : --C--C-GGA-TCC-GAT-AAGCTCAGTCGGTAACGCGTCTGACTATCAATTC-----AAGG-GTCTTGATTTCGAAT-CCCCTTCCGGCAACAGTC----ACC--GTGATGATTGATA----TAC--AACATTGTGTCTCATT----ATCATTCGCCTCT-A-CACTGATTAAAGTGGAAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTAAAGTGTT--GGTTAACCTTT---CAG-GGTCCCAGGAAAC-------AGTGGTTCGGTTAACT-GA--------------T--------------C--------------G-------------------------ACTGTTAGCCCTCGATGGCATAAAAATG---A-----------C-----------GC---TTAATATTCAATCAATC-AATCTCAATTtttgat
gi|6 : aaataattacatacctatactatatcaaaagaatgcaattaaacataagctgacttgtctgtggaccagtatctaatttttaaagggaatgcaggatggatgtaacgtcattttaaTGAGTATTTAACATCA----T---TCTATGCCATCCATGACTA-CAGCTGTAAATCAATTAACATACT-AATCCC-CATTCTT-T--C-----CAG--GGA--A--C-GGA-CCC-GAT-TAGCTCAGTCGGTAATGCGTCTGACTATTACTCC-----AGGG-GTCTTCAGTTCGAAT-CCTCGCCCAGAATCAGTC----TCC--GTGGTGATTGATA----TAC--GACATTGTGTCTTATT----ATCATTCGTTTCTCACCGCTGATCCAAGTGGGAAA--ATT---ACCAGTTACTTACGGAGATGGGACGTGCTCGAGTATT--GG-TAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTATGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC-------TATTCAATCAATC-AA--TTAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGATcttttgaaattgggatatataaatataattatgtttatggaagatttctatatctctcaaagcagattatataacatgtatacatgcaagcaagcattttgaatgtggtttaacgccattaataacac
gi|7 : tatgtcggcgttagtactaatctgacagaaa--C-GGG-CAC-GAT-GAGC-CGGTCAGTTATGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTTGAAT-CCCCGCCCGACAGCATTC----TCC--TCGATGACTGATA----TAC--AACATTGTGTCGCATT----ATCATTCGTTTCTCACTGCTGGTTCAAGTGGGAAA--GTT---ATCAGTTACTTGCAGAAATGGGGTGTCCTCGAGTATT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GATCGTCTGTTAGCTCT--------------C--------------G-------------------------A-------------------------TG---GCATAAAAATAAC-----------GC---TAAATATTCAATCAATC-AA--TCAgatatgtcttggttgt
gi|9 : aatttgatttctaatgagtgtgaacttaacctaagccatgaaaattgttttctcaatgcatcatctattttatcattataagcgtaataataaaatgaggccttaaattttgtataataatcaagttgagacatgtaCA----T---GTAATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---AT-AA---C-CACTGCT-T--C-----CTG--GGA--T--C-ccatattatgtatgaattgatcatatatcatccctttagtaatggtaaatacggtcaaacctgtataagtggtca
gi|9 : TT-T--C-----TAGCAGGATGC--C-AGG-CCC-GAT-TAGCGCATTCGTTTATACATCTGACTATCAATCC-----AGGG-GTCGTGAGTTGGAAT-CCCCGCCCGGCAACAGTA----TCT--GTGATGATTTATA----TAC--AACATTGTGTCTCATT----ATCATTCGTCTCTCACCGCTGATTTAAGTGGGAAA--GTT---ATCAGTTACTTGCAGAGACGGGGTGTGCTCGAGTACT--GGTTAACCTTC---AAG-GATCCCAGGAAGC-------AGTGGTTATGTTAACT-GA--------------T--------------C--------------G-------------------------cttgaaggttaaccagtactcgagcacaccccgtctctgcaagtaactgataactttcccacttaaatcagcggtgagagacgaatgataatgagacacaatgttgtatataaatcatcacagatactgttgccgggcggggattccaactcacgacccctggattgatagtcagatgtataaacgaatgcgctaatcgggcctggcatcctgctagaaatcaagctacatatgaagagagaaatggcatcttttttgtgactgtcaaaataagaaccagtttaagttaacgttcacgtatgacagtagatcatcatatttacatgtacacgtcgtatatgctgaagacatgctggtatatactggtacatatgttattgtaaaatgtggatt
11 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AAAAAAAAACTATATTTGCTTATCATAACTACATAAACATGCAATAGAAACATCCATGTCAAGTTTCAGTTGAATTGGCCTAGTGGTTTCAGAGAAAGTGCTGCTAACAGACGACAGACGACGGATAACGCGCAATCATAAAAGCTCTTCTGGCCAAAAAAAAGGCTTATGTAATTTGGTTTTGAAATATTTCAAAATGGTTCATAATGCTTGTGATTTCTTGCTGCAGATGAGTAGAACAAAAGTTGGCATGGCATATACTGCAATAAGACATCACTGGTGTCAAGAAAGTGAATTTTATAAGAATTCAATATATGCATTTATTGATGAGCATTCATTTTTCAAAAAATCTCAGGGTTCACTGCACCCCTTTAAAACAAGAGGCCCAAGAGGGCCTGAGGACGCTCTACTGACTCATAGTGGCCATAGCACTTTTTGAAATTCTACTATGCAATAGAAAT
Unaligned ( gi|24 ): ACTCCCTACCCTTGGATTAATGCTCAGATTGCTACCAACTGAACTGATAAGACTGCGAGTTGTGTTTGAAAATAATTTGTTTTTATTTTGATACAGTTGTTTGAGGCAATT
Unaligned ( gi|26 ): ACATATATTCGTTTTTGTAGGTAAATTGAAAACAGTTAATTTCAAATACAGTCTCTGGTTAAATATATAAAAGTATTTTTCTCTCCATTTTTTGTGCACT
Unaligned ( gi|29 ): TGAGAAGTATTCATAGGACAATTTTTAGCAAATTCCATGTGCTGAAATCTCCTGTTGTATAAGTGTATTAGTGTAGGCGCAAC
Unaligned ( gi|31 ): TATGGAGATATTTGTGCTGGAGTTCTAGTTAACTTTCCAGAATTCCAGAAACGAGTTGTTATGTTGACTGGTACTCT
Unaligned ( gi|33 ): TAAACAATATATAACATCAAGAGAAACAACCGGTATTACATCTAAATAGCGTGTTTTTGGAACGTTTTTAT
Unaligned ( gi|35 ): AGGATGACAAAACTTGTTTGTTTGAATGCTTAGTGTCATGTTATGACATCAAGGGATAATATGC
Unaligned ( gi|37 ): GTTTGTTGGAATATTTAACATAATTTTTATGCCAAAGAGAATGATGATCATC
Unaligned ( gi|40 ): AATTGATTGTTTGAATTTGTTTAAATATTTAGCATCATTTTTATGACA
Unaligned ( gi|43 ): TGTTTGTTTGAATATTTAGCATGATTTTTGTGCCATAAAACAAAAC
Unaligned ( gi|45 ): AGTCCTTTATGATGCAGTTGAGATAAGATAATCCAATG
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 2222 111 2222222222222 11111 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555
lowQualScore : 1 1 0000 888 0 111 6 2222222222222 3 55 44444 1 8888888 22 3 1 1 1 2 44444 1 1 2 4444 22 4444 22 5 4444 22 333 2 22 555555 1 6666666 2 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 333 2 33
lowQualScore : . . .... ... . ... . ............. . .. ..... . ....... .. . . . . . ..... . . . .... .. .... .. . .... .. ... . .. ...... . ....... . ............................................................................................................................. ... . ..
lowQualScore : 4 4 6666 888 7 777 5 8888888888888 6 00 11111 0 1111111 66 6 7 6 6 1 22222 7 8 2 2222 88 2222 88 4 0000 66 333 5 55 999999 9 5555555 0 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 999 4 44
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---CT-AA---C-CATTCTT-T--C-----CNG--GGA--C--C-GGG-CCC-GAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATA----TAC--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGAT
Reference ( family-355 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---CT-AA---C-CATTCTT-T--C-----CNG--GGA--C--C-GGG-CCC-GAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATA----TAC--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGAT
gi|1 : -GGT-TAGCTGAGTTGGTAGC--------CTATC-------------------TGAATTTGAAG-CCC-GCCCAGCCACAATC----TCC--ACGATGATTGATA----TATAGGACATTACATCTCATT----GTTATTTGTCTCTCATTGCTCTTTCAAGTGGGAAT--GTT---ATCAATTCCTTTAGGAGAT-GGGTAT------ATA----AGATAACCT-----------TCCGAGGAAAG-------AG-----AAGTT-GCT-GA--------------T--------------CGTCTGTTTTCCCTTG-------------------------A-------------------------TG---A-----------CATAAAAATTATGC---TAAATATTCAAACAAAC-AA--
gi|10 : ctgaaataattaacatacagacttaccaatgttgcatatcctatctgatttatT-C--C-----CAG--AGA--CAGCAGGG-CCT-GAT-TAGCTCAGTCGTTAGCGCGTCTGACTATCAATCC-----AAGG-GTCGTGAGTTTGAAT-CCCTGCC------CAGTCTGAATCCATGTGATGGTTGATA----TAT--GACATTG------------------------CTCACTGCTGATTCAAGTGGGAAA--GGT---ATAAGTTACTTGTGGAGATGGGGTGTGCTCGATTACT--AGTTAAACTTC---CAT-GATCCAAAGAAAC---------TCGTTACGTTAAGTAGA--------------C-------------------------------------------------------A-------------------------TA---G-----------------------------AAATATCCAatctcttgtcaggctaaatatttacaaaatgacaagaaaataatcaacatcttggttacctagtcaggcaaaattcacaagcaaccgacataagttgtatgttactttttaatgttttatactgtttttgaccttgcaaagtggtctttaatgaaaagcattgcagtttgaggcaaaccttccaaacgactttcttgtgttttttaacaatgacattgcagtatacaaattttgtaataaataaaagaaattaaaaatgcaattaaaaaacacaattatgacattgctctacatataaacgagataactgaaactaagataagtgaaggtgagattttcacgagactttgtacacaaata
gi|11 : tagtaaatatttgtttttataatgataaatgcataaattcatttataggcatgaaaatctagtctatgatattgttgaagccttataaaaggttataattagtccaagacttgctgtatatttgtcttgttaca--C--T-GGG-CCT-AAT-TAGTTCAGTTGTTAGCATGTCTGACTGTCAATCC-----AGTG-GTCGTGAGTTCGAAT-CCCCGCCCGGCCACAATC----TCC--ATGATGTTTGATA----TGC--GATATTG-ATTTCATT----ATCATTTGTCTCTCAC-----------ATGAGAAA--GTT---ATCAGTAACTTACAGAGATGGGGCGTGCTTGAGTACT--GGTTAACCTTT---TAG-GATCCCAGGAAACAGTGGTTAGTGGTTAGGTTAACT-GA--------------T--------------C--------------GTCTGCTAGCCTTCGATGGCACAAAAA-------------------------TG---A-----------C-----------GC---CAAATATTCAATCAATC-AA--TTAttctacaccaaatactacaccttgaatatcaagttgaattttctttgggttacttaaaca
gi|12 : ggtggctttgctctctggaactgtaggagtaaaaattcatttaaGG--C--C-GGG-CCC-GAT-TAGCTCAGTTGGTTGCACGCCATATTATAAATCC-----GGGG-ATTATG--------------------CAACAGTC----TCC--ATAATGATTGATA----TAT--GACATTGTGTCTCATT----ATCATTCGTCTTTCACCGCTGATTCAAGTGGGGAA--GTT---GTCAGTTATTTGCGGAGATGGCTAGTGCTTGAGTACT--GGTTAACATTT---TAG-AATCGCAGGAAAC-------AGTGGTTAGATTAACT-GA--------------T--------------CGTCTGTTAGCCCATG-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCAATTcttcattcaataagaagatgactatcttttgtcacattgtttggggattggaagggagataacccatcattgcacagttctatagcgcttacatataaat
gi|13 : aaataatttcccggacaaaccttatacttgtatacaatggattgcttaaacatactgaatctttatgtatgttgtttaggtacagtagatcatctctttttttttgtcaaacaatttgttgcaagta--C--T-GGGTCCC-GGT-TAGCTCAGTCGGATACGCGTCTGACTATCAATCC-----AGGG-GTCATGAGTTCAAAT-CTCCGCCCGGCAAAAGAC----TCC--GTGATGATTGATA----CAC--AACATTGTGTCTC-------ATCATTCGTCTCTAACCACTGATTCGAGTGGGGAA--GTT---GTCAGTTACTTGCAGAGATGGGGTGTGCTCGAGTACA--GGTTA--------------ATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------CGTCTGTTAGCCCTTG-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCAATtgttgtgagtaaagaaatagaga
gi|14 : cacaccaaatatgctgttctaccaaaaaaacgggcacaagatctctgaacttgctaaaccatcttgctaatataattgGA-CCC-GGT-TAGCTCGGTCGGTAGTGTGCCTGACTATCCATTC-----AGGG-ATAGGGAGTTCGAAT-CGCCGTTCGGCAACAGTC----TCC--GTGACGATTGATATAATTAT--GACACTGCGTCTCATT----ATCATTCGTCTCTCACCACTGATTCAAGTTGGAAA--GTT---ATCAGTTACTTGCGGATAT-CGATGTGCTTGAATATT--GGTTAATCTTT---CAG-GATTCCAGAAAAG-------AGTGGTTTGGTTAACT-GATATTAGTCC-----T--------------C--------------A-------------------------A-------------------------TG---GCATAAATATGAC-----------GC---TAAATATTCAAACAAAC-AA--TAAGTTcttgcttatataaataaaaaatatcaaaatgtcagccttagcactggcagaaatatagagaa
gi|15 : actggagaaaaggacttgtaaccaaccccatcaaattgtttatagaagaatgtataaactacaataggatttattgaacacgtgattacgttagattgaagcgttacggatgatat-GGG-GCC-GAT-CGGCTCAGTCGGTTACGCGTCTGACTATCAATCG-----AGGG-ATCGTGTGTTCGAATTCCCCACCTGGCAACAGTC----TCC--GGGATGATTGATA----CAC--GTCATTGTGTCTCATT----ATCATTTGTCTTTCATCGCTGATTCAAGTGGGGGA--------------------CGGGGATTGGGATTTCCCGAACACT--GGTTAACCTAC---CAG-GATCCCAGGAAAC-------AGTGGATAGAATAACT-GATCCTCTATTAGCCCT--------------C--------------G-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTAAATCAATC-AG--TCAATaagctatat
gi|16 : gtcagaccatcgctttgctttcttgagaaatccgcagaaaatgaggaaaatgattg----TCC--GTGATGATTGATA----TAC--AACATTGTATCTCTTT----ATCATTCGTTTATCACCTCTGATTTAAATGGGAAA--GTT---ATCAGTTACATGCAGAGATGGGGTGTGCGTGAGTACT--GGTTAGCCCTC-------GAT----GG---C-------A-----TA---TAA-------------------------------------------------A-------------------------A-------------------------TG---A-----------T-----------GC---TAAATATTCAATCAATC-AA--TCAAtgcttaaaatgaggaaaaggttaaaaaaagaggtaaaaacaacaatactgcttttacagtaaca
gi|16 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatgg--C--C-GGG-CCC-GAT-TAGCTCAGTCCGTTACGCGTCTGATTATCAATCC-----AAGG-TCCGTGAccttggattgataatcagacgcgtaacggactgagctaatcgggcccggcttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|17 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatggttgattgattgattgaatatttagcatcattttatatgccatcgagggctaaccagtactcacgcacaccccatctctgcatgtaactgataactttcccatttaaatcagaggtgataaacgaatgataaagagatacaatgttgtatatcaatcaTGAATATTAAGCATCAA---T---TTTATGCCATTGAGGACTAACAGATG---ATCAGTTAAC---CT-AA---C-CATTCTT-T--C-----CTG--TGA--T--C-cttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|17 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttatATCCTT-A--C-----CTG--GAA--C--CCAGG-CCT-GGTACAG-TCAGTCAGTAGCACGTCTGACTATCAA--C-----AGAGAGTAGTGAGTTTGAAT-TCCTGCCCGGCAACAGTC----TCC--ATGATGATTGATA----TAA--GACATAGCATCTCATT----ATCAATCATCTCTCACTGCTGATTCAAGTGAAAAA--TTT---AACAAATACTTGTGGAGAT-GGATATGCTTGAGTACA--GGCTAACCTTC---CAG-GATCACAGGAAAG-------AATGGTTAGGTTAACT-GA--------------T--------------C--------------ctggaaggttagcctgtactcaagcatatccatctccacaagtatttgttaaatttttcacttgaatcagcagtgagagatgattgataatgagatgctatgtcttatatcaatcatcatggagactgttgccgggcaggaattcaaactcactactctctgttgatagtcagacgtgctactgactgactgtaccaggcctgggttccaggtaaggattcatgactactt
gi|18 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttattgaatattaagcatcaattttatgccattgaggactaacagat--C--C-GGG-CCT-GGT-TAGCTCAGTCGGTTACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAGT-CCCCGCCCGGCAACAGTG----TCC--GTGATGATTGATA----TAC--GACATTGTGTTTCATA----ATCATTTGTCTCTGATCGCTAATTCAAGTGGGAAA--GTC---ATCAGCTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGAAAAC-------TGTGGTTAGGTTAACT-GA--------------T--------------C--------------GTCTGTTAGCGTTCGGTGGCATACAAA-------------------------TG---G-----------C-----------GC---TAGATATTCAATCAATA-AA--TCtcatgactactt
gi|19 : aatttattgaatatgttgttgaagtatgtttcagttgggaTTCTT-T--CAGTCGCAC--GGC--C--C-GG--CCC-GAT-TAGCTCAGTCGGTTACACGTCTGACTATCAATCC-----AGGG-GTCGTGAATTTGAAT-CCCCGCCCGGCAACAGTC------C--ATGATGATTGAAA----TAC--GACATTGTGTCTCATT----ATCATTTGTCTTTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCAAGTACT--GGTTA--------------ATCCCAGGAAAT-------AGTGGTTAGGTTAACT-GATTGTCTGTTAGCCCT--------------T--------------G-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCcttttttgttgggggaatgttgttgattacaaatatacaca
gi|2 : tcaaagaacttatcggcagcgactgaaaCATTGCGTCTCATTGAGTATCATTCAACTATCTCTGCTACTTCA--TGAGAAAATGTT---ATCATTTACATGC------GGGGCGTGTTCGAGCACC--GGTCA------------------CAGCAATT-------AGTTGTTAAGTTAACT-GG--------------T--------------T--------------GCCTTTTAGCCCTCC-----------A-------------------------TG---GCAAAAATTGA-C-----------GC---TAAATATTCAAACAATCAAA--TCAAaagaaaaatgcagagtatttacagagagaacgagatcgaataag
gi|20 : agtattacaaataatttatataccgatatattctttttttattgataaactcagattttgaagttcatctgcagtatttatagagacatgtacttttgaaacactaaacacatagccaatggttttaaaagtgtcctgtttccatgatagatattcctctgttagtccaaatatgcaggaaaaatatatggttggcaagatttttttttctcacaaattcaatggtttgctgacaccgcttcatatttgacaattctgcccatttgttgcagtttatctttacgcatctttacactgctatttctgcatccaacactttccaatgtcatccaaacgtgacagaactaatgaaaatgttcaaatatgtacaaagaaatatgaccattttaagcaatttcaacaaaaacatatcaatcgatatacaaagcatgtgtgcatttatgcTTCTT-T--C-----AGG--ATG--C--C-GGG-TCT-GAT-TAGCGCAGTCGGTTATTCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTGGAAT-CCCCGCCCGGCAACAGTC----TCC--TTGATGATTGATA----AAA--GACATTGTGACTCATT----ATCATTTATCTCTCACCGCTGATTgattgatagtaaggtgtcac
gi|20 : AGT-CCCTGCCCGGCAACAGTC----TCC--GTGATGATTGATA----TAC--GACATTGTGACTCATT----ATCATTTATCTCTAACCGCTG--TCATATGTGACC--GTT---Aatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagttaacggtcacatatgacagcggttagagataaatgataatgagtcacaatgtcgtatatcaatcatcacggagactgttgccgggcagggacttaaccaaagagactggtaggctactagtatattaaaatttc
gi|21 : aatcagcggtgagagataaatgataatgagtcacaatgtcttttatcaatcatcaaggagactgttgccgggcggggattccaactcacgacccctggattgatagtcagacgaataaccgactgcgctaatcagacccggcatcctgaaagaaatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagtAGACG---ACTA--TGAT---CTCAA---TGTACTCTT-TGAT-----CTA--G----C--C-CGG-CCC-AAT-TAGCTTAGTCGGTAGTGCGTCTAA--ATCAATTA-----AGGG-ATCGTGAGTTCGAAT-CCCCGTC----------------------------TGAT-----CAC--AACAATTCGTCTCATT----GTC-TTCATCTCTCATACCTGATTAAGGTGGGATA--GTT---ATCAGTTAATTG-----------TGTGTTTGAGTACT--GGCTCATCTTCACCCGGTGATTCCAGGAAAT-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------GT------------------------A-------------------------TGCTAG-----------C-----------CCTCTTAAATGTTCAAACAAAC-Ataaccaaagagactggtaggctactagtatattaaaatttc
gi|22 : taaagcggcacagagcaaagacttcAGTAGGAAA--GTTGTAATCAGTTATTTGCGAAGATGGGGTGTGCTCGAGTACT--GGTTTAGCTTT---CAG-GATCCCAGGAAAA-------AGTGGTTAGGTGAACT-GATTGTCTGTTAGCCCT--------------C--------------G-------------------------A-------------------------TG---GCATAAAAATGAC-----------GC---TAAATATTCAATCAATC-AA--TCAagggacgtgtcacttattgt
gi|23 : tgctgtttattaattgtttcttattgtctcaatacatgtgtgtagggaaatcccaatattttatatgaacctaattcaatttttatataaataatctatcatgtgttgttttctgaacagtcagaacgaA--C--T-GGA-TCCTGAG-TATCTCAGTCGGTAACGTTTCTTACAGTCACTCA-----ATGG-GTCGCGGATTTAAAT-C
gi|25 : atctctgcaagtcactgacttcttccccaagtcactgatttcttcctcatatagacactcctgagagattcgtggctacatatcatagatcctgacaaggatt--GAA--C--T-GTG-CTT-GGT-TAGCTCAGTCGGTAGTG--------TATCAATCC----------------AGTTTGAAT-CCCGAACAGGCAAGAGTtgtgcataataaagattgttccaaatggcgatgagtatatatttc
gi|27 : TTTTT-T--C-----TAG-------C--C-GGG-TCT-GAC-TCGCGCTGTTGGTAATGCGTCTGTTTGTCAGTCC-----AATA-ATCGTaaattagtatcacaaaaaccatgaggtgttatttata
gi|28 : GCGTCA----T---TTTATGCCATCGGGTGTTAACATTTG---ATCAaatgtagcgaatatcatagtacgaaa
gi|3 : tgaccgccatttttccaaacaggtttgatttgtttgaataaaatTCAAAT-CCCCGCC-GGCAACAGTC----TCC--GTGATGATTGATA----TAA--GACATTGTGTCTCATT----ATCATTCGTTTTTCACTGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGACTGGTTTTGCTTGATTTCT--GGTTAACCTTT---CAG-GATCCTAGGAAAC-------AGTGGTTAGGTTAACT-GATCATCTGTTAGCCCT--------------C--------------G-------------------------G-------------------------TG---GAACAAAAATGAT-----------GC---TAAATATTCAATCAAAC-AA--TCAATTtct
gi|30 : aaacggagtgatagaggcattcaatgaaaatgcagtataaagtaaagtatcaaaaataaaagtatattcaaatctaacaaccatttgatggcactgagttagttcacagcgtggatatggttatactgattCC-GGC-TAGCTCAGTAG----CGCTTCTGGCTGTAAATCT-----TTGG-GTCATGCGGTCCCAT-CCCCGCCTGcccttatatgaccactatacatccctacccatcagatagtccaaacttcagtcccttactcatgttcatgtagagatttgctatgatcagacaatgcattagacctcgattctcatacaaatggatacgaaaatgaaaaaaaatccaattttctaatatgatttcaatgtaaaatctcacatatatgaaaagcatttgaatataactggcctagtggtttcagagaaagtactgctaatggacaacacacaa
gi|32 : -CCA-GGT-TAGCTGAGTCTGCAGTGTGTCTAACTATCAATCC-----AGGG-Gaacaggcttaatatat
gi|34 : g-CCT-GGT-CAACT--GTCAG---CGGGTCTGACTATCAATCCTGACTAAGG-GTTGTGACTTgagccatttcacaaaaaaaattacaataa
gi|36 : ttaaAAC---CC------C-CATTCTTAT--TGG---CAG--GCAG-C--T-GAG-CCT-GGT-TAGCTCATTTGGTAATGTGTCTGACTacaggctg
gi|38 : GAATATTTAGCGTCAT---T---TTTATGCC
gi|39 : tgtttgttaTATTAAGCATCA----TCGTTTTATGCCAGCAAGTGCCAACAGACA---ATccatggattgatagtca
gi|4 : A--C--T-GGG-CCT-GTT-TAGCTCAGTTGGTTACATGTCTGACTATCAAGCC-----AGGG-GTTGTGAGTTCGAAT-CCCCAACAGACAACAGTC----CCC--ATGATAATTGATA----TAC--GACATTGTGTCTCATT----ATCATTCATCTCTCACTACTGATTCAAGTGGGAAA--GTT---AACAGTAACTTGCAAAGAT-TGGTGTGCCCGAGGGCT--GGTTAACC-AT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------TCATCTGTTAGCCCCC--------------A-------------------------A-------------------------TG---G-----------CATTAAAATGATGC---AAAATATTCAATCAATC-AA--tttagt
gi|41 : tacatatattcatatatttttttggttggtaacttgaaaacagttaatttcaaatacagtttccggttaaatatataaaagtattttcctctccattttttgtgcacttttacgagtaggtCAGCTACATGCAAAGATGGA-TGTGCTCGAGTACTCAGG-TAACCTTT---ttatgagtaggaagacatctgagaagtatttataagaaaagttttagcaaatttcatgagctaaaatatcctgttgtataagtgtatcagtgtatatgcaaccatgtcttgtttaggtgtatatttgctatgttattgtaaaagtgactt
gi|42 : ATATTTAGCATCATTTTT---TTTTTGCCATAAAGGGTTAACAG
gi|44 : GGAGA-GGGATGTGCTCGAGTACT--CGTTAACCT-----------TCCCAGAAAAtctat
gi|46 : GCATCA----T---TTTATGCCATCGGATGTTAACAtg
gi|5 : --C--C-GGA-TCC-GAT-AAGCTCAGTCGGTAACGCGTCTGACTATCAATTC-----AAGG-GTCTTGATTTCGAAT-CCCCTTCCGGCAACAGTC----ACC--GTGATGATTGATA----TAC--AACATTGTGTCTCATT----ATCATTCGCCTCT-A-CACTGATTAAAGTGGAAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTAAAGTGTT--GGTTAACCTTT---CAG-GGTCCCAGGAAAC-------AGTGGTTCGGTTAACT-GA--------------T--------------C--------------G-------------------------ACTGTTAGCCCTCGATGGCATAAAAATG---A-----------C-----------GC---TTAATATTCAATCAATC-AATCTCAATTtttgat
gi|6 : aaataattacatacctatactatatcaaaagaatgcaattaaacataagctgacttgtctgtggaccagtatctaatttttaaagggaatgcaggatggatgtaacgtcattttaaTGAGTATTTAACATCA----T---TCTATGCCATCCATGACTA-CAGCTGTAAATCAATTAACATACT-AATCCC-CATTCTT-T--C-----CAG--GGA--A--C-GGA-CCC-GAT-TAGCTCAGTCGGTAATGCGTCTGACTATTACTCC-----AGGG-GTCTTCAGTTCGAAT-CCTCGCCCAGAATCAGTC----TCC--GTGGTGATTGATA----TAC--GACATTGTGTCTTATT----ATCATTCGTTTCTCACCGCTGATCCAAGTGGGAAA--ATT---ACCAGTTACTTACGGAGATGGGACGTGCTCGAGTATT--GG-TAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTATGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC-------TATTCAATCAATC-AA--TTAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGATcttttgaaattgggatatataaatataattatgtttatggaagatttctatatctctcaaagcagattatataacatgtatacatgcaagcaagcattttgaatgtggtttaacgccattaataacac
gi|7 : tatgtcggcgttagtactaatctgacagaaa--C-GGG-CAC-GAT-GAGC-CGGTCAGTTATGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTTGAAT-CCCCGCCCGACAGCATTC----TCC--TCGATGACTGATA----TAC--AACATTGTGTCGCATT----ATCATTCGTTTCTCACTGCTGGTTCAAGTGGGAAA--GTT---ATCAGTTACTTGCAGAAATGGGGTGTCCTCGAGTATT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GATCGTCTGTTAGCTCT--------------C--------------G-------------------------A-------------------------TG---GCATAAAAATAAC-----------GC---TAAATATTCAATCAATC-AA--TCAgatatgtcttggttgt
gi|9 : aatttgatttctaatgagtgtgaacttaacctaagccatgaaaattgttttctcaatgcatcatctattttatcattataagcgtaataataaaatgaggccttaaattttgtataataatcaagttgagacatgtaCA----T---GTAATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---AT-AA---C-CACTGCT-T--C-----CTG--GGA--T--C-ccatattatgtatgaattgatcatatatcatccctttagtaatggtaaatacggtcaaacctgtataagtggtca
gi|9 : TT-T--C-----TAGCAGGATGC--C-AGG-CCC-GAT-TAGCGCATTCGTTTATACATCTGACTATCAATCC-----AGGG-GTCGTGAGTTGGAAT-CCCCGCCCGGCAACAGTA----TCT--GTGATGATTTATA----TAC--AACATTGTGTCTCATT----ATCATTCGTCTCTCACCGCTGATTTAAGTGGGAAA--GTT---ATCAGTTACTTGCAGAGACGGGGTGTGCTCGAGTACT--GGTTAACCTTC---AAG-GATCCCAGGAAGC-------AGTGGTTATGTTAACT-GA--------------T--------------C--------------G-------------------------cttgaaggttaaccagtactcgagcacaccccgtctctgcaagtaactgataactttcccacttaaatcagcggtgagagacgaatgataatgagacacaatgttgtatataaatcatcacagatactgttgccgggcggggattccaactcacgacccctggattgatagtcagatgtataaacgaatgcgctaatcgggcctggcatcctgctagaaatcaagctacatatgaagagagaaatggcatcttttttgtgactgtcaaaataagaaccagtttaagttaacgttcacgtatgacagtagatcatcatatttacatgtacacgtcgtatatgctgaagacatgctggtatatactggtacatatgttattgtaaaatgtggatt
blockSeqs : T G TTTT CGT TAA A ATACTAATCCC A GA AGTCG T CAGGATG . C T T A A TGACT A T C TGAA AT TAAT . T GAGT AT GTA G CA TCACCC T AGTGGTT A TCGTCTGCTAGCCTTCGATGGCACAAAAATGAC TCT A TC
blockSeqs : A G T . . G CTCAATG . . GG T GCAG . . . . . A . . . C . . . . T . . . G . TCC . . . TCGTCTGTTAGCCCATGATGGCATAAAAATGAT . . .
blockSeqs : T A . . . . ATAAC . . . A TGA . . . . . T . . . C . . . . C . . . G . TTT . . . TCGTCTGTTAGCCCTTGATGGCATAAAAATGAT . . .
blockSeqs : T A . . . CCC . . . G GAA . . . . . T . . . T . . . . T . . . G . TTT . . . TCCTCTATTAGCCCTCGATGGCATAAAAATGAT . . .
blockSeqs : A . . . . . . T GGC . . . . . A . . . C . . . . T . . . T . TTC . . . TCGTCTGTTAGCGTTCGGTGGCATACAAATGGC . . .
blockSeqs : A . . . . . A ATG . . . . . T . . . C . . . . C . . . G . ACC . . . TTGTCTGTTAGCCCTTGATGGCATAAAAATGAT . . .
blockSeqs : . . . . . A GAA . . . . . T . . . C . . . . T . . . G . TCC . . . TTGTCTGTTAGCCCTCGATGGCATAAAAATGAC . . .
blockSeqs : . . . A GGA . . . . . A . . . C . . . . T . . . G . TTC . . . TCATCTGTTAGCCCTCGGTGGAACAAAAATGAT . . .
blockSeqs : . . . T GGA . . . . . T . . . C . . . . C . . . G . TTC . . . TCATCTGTTAGCCCCCAATGGCATTAAAATGAT . . .
blockSeqs : . . . A G . . . . . T . . . A . . . . T . . . G . TTC . . . TCGACTGTTAGCCCTCGATGGCATAAAAATGAC . . .
blockSeqs : . . . . . . T . . . T . . . . T . . . T . ATC . . . TCGTCTGTTAGCTCTCGATGGCATAAAAATAAC . . .
blockSeqs : . . . . . A . . . A . . . . C . . . G . TTC . . . TTGCCTTTTAGCCCTCCATGGCAAAAATTGAC . . .
blockSeqs : . . . . . A . . . C . . . . T . . . G . TTC . . . TATTAGTCCTCAATGGCATAAATATGAC . . .
blockSeqs : . . . . . A . . . C . . . . T . . . G . TTC . . . TCGTATGCTAGC . . .
blockSeqs : . . . . . A . . . C . . . . T . . . G . TCA . . . TCGATGGC . . .
blockSeqs : . . . . . A . . . C . . . . T . . . G . TC . . . AATGAT . .
blockSeqs : . . . . . A . . . . . . . . T . . . G . . . . . CATAG .
blockSeqs : . . . . . T . . . . . . . . T . . . . . . . . .
blockSeqs : . . . . . A . . . . . . . . . . . . . . . . . .
blockSeqs : . . . . . A . . . . . . . . . . . .
blockSeqs : . . . . T . . . . .
blockSeqs : . . . T . .
blockSeqs : . . . . .
blockSeqs : . . .
blockSeqCons : **** CTC********** ** ** TTC***
originalCons : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC---CT-AA---C-CATTCTT-T--C-----CNG--GGA--C--C-GGG-CCC-GAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATA----TAC--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGAT
finalCons : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAACCTC----------CATTCTT-T--C-----CNG--GGA--C--C-GGG-CCC-GAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATA----TAC--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTTC---AG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGAT
11 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AAAAAAAAACTATATTTGCTTATCATAACTACATAAACATGCAATAGAAACATCCATGTCAAGTTTCAGTTGAATTGGCCTAGTGGTTTCAGAGAAAGTGCTGCTAACAGACGACAGACGACGGATAACGCGCAATCATAAAAGCTCTTCTGGCCAAAAAAAAGGCTTATGTAATTTGGTTTTGAAATATTTCAAAATGGTTCATAATGCTTGTGATTTCTTGCTGCAGATGAGTAGAACAAAAGTTGGCATGGCATATACTGCAATAAGACATCACTGGTGTCAAGAAAGTGAATTTTATAAGAATTCAATATATGCATTTATTGATGAGCATTCATTTTTCAAAAAATCTCAGGGTTCACTGCACCCCTTTAAAACAAGAGGCCCAAGAGGGCCTGAGGACGCTCTACTGACTCATAGTGGCCATAGCACTTTTTGAAATTCTACTATGCAATAGAAAT
Unaligned ( gi|24 ): ACTCCCTACCCTTGGATTAATGCTCAGATTGCTACCAACTGAACTGATAAGACTGCGAGTTGTGTTTGAAAATAATTTGTTTTTATTTTGATACAGTTGTTTGAGGCAATT
Unaligned ( gi|26 ): ACATATATTCGTTTTTGTAGGTAAATTGAAAACAGTTAATTTCAAATACAGTCTCTGGTTAAATATATAAAAGTATTTTTCTCTCCATTTTTTGTGCACT
Unaligned ( gi|29 ): TGAGAAGTATTCATAGGACAATTTTTAGCAAATTCCATGTGCTGAAATCTCCTGTTGTATAAGTGTATTAGTGTAGGCGCAAC
Unaligned ( gi|31 ): TATGGAGATATTTGTGCTGGAGTTCTAGTTAACTTTCCAGAATTCCAGAAACGAGTTGTTATGTTGACTGGTACTCT
Unaligned ( gi|33 ): TAAACAATATATAACATCAAGAGAAACAACCGGTATTACATCTAAATAGCGTGTTTTTGGAACGTTTTTAT
Unaligned ( gi|35 ): AGGATGACAAAACTTGTTTGTTTGAATGCTTAGTGTCATGTTATGACATCAAGGGATAATATGC
Unaligned ( gi|37 ): GTTTGTTGGAATATTTAACATAATTTTTATGCCAAAGAGAATGATGATCATC
Unaligned ( gi|40 ): AATTGATTGTTTGAATTTGTTTAAATATTTAGCATCATTTTTATGACA
Unaligned ( gi|43 ): TGTTTGTTTGAATATTTAGCATGATTTTTGTGCCATAAAACAAAAC
Unaligned ( gi|45 ): AGTCCTTTATGATGCAGTTGAGATAAGATAATCCAATG
Alignments
lowQualScore : 22222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 2222 111 444444444444 11111 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555
lowQualScore : 1 1 0000 888 0 111 6 333333333333 9999 3 55 44444 1 8888888 22 3 1 1 1 2 44444 1 1 2 4444 22 4444 22 5 4444 22 333 2 22 555555 1 6666666 2 55555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 333 2 33
lowQualScore : . . .... ... . ... . ............ .... . .. ..... . ....... .. . . . . . ..... . . . .... .. .... .. . .... .. ... . .. ...... . ....... . ............................................................................................................................. ... . ..
lowQualScore : 4 4 6666 888 7 777 5 000000000000 4444 6 00 11111 0 1111111 66 6 7 6 6 1 22222 7 8 2 2222 88 2222 88 4 0000 66 333 5 55 999999 9 5555555 0 77777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 999 4 44
consensus : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC--------CTAACCAT----TCTT-T--C-----CNG--GGA--C--C-GGG-CCC-GAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATATA----C--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGAT
Reference ( family-355 ) : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAATATTTAGCGTCA----T---TTTATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC--------CT--CCAT----TCTT-T--C-----CNG--GGA--C--C-GGG-CCC-GAT-TAGCTCAGTCGGTNACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAAT-CCCCGCCCGGCAACAGTC----TCC--GTGATGATTGATATA----C--GACATTGCGTCTCATT----ATCATTCGTCTCTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC---TAAATATTCAATCAATC-AA--TCAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGAT
gi|1 : -GGT-TAGCTGAGTTGGTAGC--------CTATC-------------------TGAATTTGAAG-CCC-GCCCAGCCACAATC----TCC--ACGATGATTGATATA----TAGGACATTACATCTCATT----GTTATTTGTCTCTCATTGCTCTTTCAAGTGGGAAT--GTT---ATCAATTCCTTTAGGAGAT-GGGTAT------ATA----AGATAACCT-----------TCCGAGGAAAG-------AG-----AAGTT-GCT-GA--------------T--------------CGTCTGTTTTCCCTTG-------------------------A-------------------------TG---A-----------CATAAAAATTATGC---TAAATATTCAAACAAAC-AA--
gi|10 : ctgaaataattaacatacagacttaccaatgttgcatatcctatctgatttatT-C--C-----CAG--AGA--CAGCAGGG-CCT-GAT-TAGCTCAGTCGTTAGCGCGTCTGACTATCAATCC-----AAGG-GTCGTGAGTTTGAAT-CCCTGCC------CAGTCTGAATCCATGTGATGGTTGATATA----T--GACATTG------------------------CTCACTGCTGATTCAAGTGGGAAA--GGT---ATAAGTTACTTGTGGAGATGGGGTGTGCTCGATTACT--AGTTAAACTTC---CAT-GATCCAAAGAAAC---------TCGTTACGTTAAGTAGA--------------C-------------------------------------------------------A-------------------------TA---G-----------------------------AAATATCCAatctcttgtcaggctaaatatttacaaaatgacaagaaaataatcaacatcttggttacctagtcaggcaaaattcacaagcaaccgacataagttgtatgttactttttaatgttttatactgtttttgaccttgcaaagtggtctttaatgaaaagcattgcagtttgaggcaaaccttccaaacgactttcttgtgttttttaacaatgacattgcagtatacaaattttgtaataaataaaagaaattaaaaatgcaattaaaaaacacaattatgacattgctctacatataaacgagataactgaaactaagataagtgaaggtgagattttcacgagactttgtacacaaata
gi|11 : tagtaaatatttgtttttataatgataaatgcataaattcatttataggcatgaaaatctagtctatgatattgttgaagccttataaaaggttataattagtccaagacttgctgtatatttgtcttgttaca--C--T-GGG-CCT-AAT-TAGTTCAGTTGTTAGCATGTCTGACTGTCAATCC-----AGTG-GTCGTGAGTTCGAAT-CCCCGCCCGGCCACAATC----TCC--ATGATGTTTGATATG----C--GATATTG-ATTTCATT----ATCATTTGTCTCTCAC-----------ATGAGAAA--GTT---ATCAGTAACTTACAGAGATGGGGCGTGCTTGAGTACT--GGTTAACCTTT---TAG-GATCCCAGGAAACAGTGGTTAGTGGTTAGGTTAACT-GA--------------T--------------C--------------GTCTGCTAGCCTTCGATGGCACAAAAA-------------------------TG---A-----------C-----------GC---CAAATATTCAATCAATC-AA--TTAttctacaccaaatactacaccttgaatatcaagttgaattttctttgggttacttaaaca
gi|12 : ggtggctttgctctctggaactgtaggagtaaaaattcatttaaGG--C--C-GGG-CCC-GAT-TAGCTCAGTTGGTTGCACGCCATATTATAAATCC-----GGGG-ATTATG--------------------CAACAGTC----TCC--ATAATGATTGATATA----T--GACATTGTGTCTCATT----ATCATTCGTCTTTCACCGCTGATTCAAGTGGGGAA--GTT---GTCAGTTATTTGCGGAGATGGCTAGTGCTTGAGTACT--GGTTAACATTT---TAG-AATCGCAGGAAAC-------AGTGGTTAGATTAACT-GA--------------T--------------CGTCTGTTAGCCCATG-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCAATTcttcattcaataagaagatgactatcttttgtcacattgtttggggattggaagggagataacccatcattgcacagttctatagcgcttacatataaat
gi|13 : aaataatttcccggacaaaccttatacttgtatacaatggattgcttaaacatactgaatctttatgtatgttgtttaggtacagtagatcatctctttttttttgtcaaacaatttgttgcaagta--C--T-GGGTCCC-GGT-TAGCTCAGTCGGATACGCGTCTGACTATCAATCC-----AGGG-GTCATGAGTTCAAAT-CTCCGCCCGGCAAAAGAC----TCC--GTGATGATTGATACA----C--AACATTGTGTCTC-------ATCATTCGTCTCTAACCACTGATTCGAGTGGGGAA--GTT---GTCAGTTACTTGCAGAGATGGGGTGTGCTCGAGTACA--GGTTA--------------ATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------T--------------CGTCTGTTAGCCCTTG-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCAATtgttgtgagtaaagaaatagaga
gi|14 : cacaccaaatatgctgttctaccaaaaaaacgggcacaagatctctgaacttgctaaaccatcttgctaatataattgGA-CCC-GGT-TAGCTCGGTCGGTAGTGTGCCTGACTATCCATTC-----AGGG-ATAGGGAGTTCGAAT-CGCCGTTCGGCAACAGTC----TCC--GTGACGATTGATATAATTAT--GACACTGCGTCTCATT----ATCATTCGTCTCTCACCACTGATTCAAGTTGGAAA--GTT---ATCAGTTACTTGCGGATAT-CGATGTGCTTGAATATT--GGTTAATCTTT---CAG-GATTCCAGAAAAG-------AGTGGTTTGGTTAACT-GATATTAGTCC-----T--------------C--------------A-------------------------A-------------------------TG---GCATAAATATGAC-----------GC---TAAATATTCAAACAAAC-AA--TAAGTTcttgcttatataaataaaaaatatcaaaatgtcagccttagcactggcagaaatatagagaa
gi|15 : actggagaaaaggacttgtaaccaaccccatcaaattgtttatagaagaatgtataaactacaataggatttattgaacacgtgattacgttagattgaagcgttacggatgatat-GGG-GCC-GAT-CGGCTCAGTCGGTTACGCGTCTGACTATCAATCG-----AGGG-ATCGTGTGTTCGAATTCCCCACCTGGCAACAGTC----TCC--GGGATGATTGATACA----C--GTCATTGTGTCTCATT----ATCATTTGTCTTTCATCGCTGATTCAAGTGGGGGA--------------------CGGGGATTGGGATTTCCCGAACACT--GGTTAACCTAC---CAG-GATCCCAGGAAAC-------AGTGGATAGAATAACT-GATCCTCTATTAGCCCT--------------C--------------G-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTAAATCAATC-AG--TCAATaagctatat
gi|16 : gtcagaccatcgctttgctttcttgagaaatccgcagaaaatgaggaaaatgattg----TCC--GTGATGATTGATATA----C--AACATTGTATCTCTTT----ATCATTCGTTTATCACCTCTGATTTAAATGGGAAA--GTT---ATCAGTTACATGCAGAGATGGGGTGTGCGTGAGTACT--GGTTAGCCCTC-------GAT----GG---C-------A-----TA---TAA-------------------------------------------------A-------------------------A-------------------------TG---A-----------T-----------GC---TAAATATTCAATCAATC-AA--TCAAtgcttaaaatgaggaaaaggttaaaaaaagaggtaaaaacaacaatactgcttttacagtaaca
gi|16 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatgg--C--C-GGG-CCC-GAT-TAGCTCAGTCCGTTACGCGTCTGATTATCAATCC-----AAGG-TCCGTGAccttggattgataatcagacgcgtaacggactgagctaatcgggcccggcttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|17 : acttcaccactgattaagtaataacattcaatacccagaccttgcgcaacagtgaggattttgaaggatgatacacagtaaattacatgatggttgattgattgattgaatatttagcatcattttatatgccatcgagggctaaccagtactcacgcacaccccatctctgcatgtaactgataactttcccatttaaatcagaggtgataaacgaatgataaagagatacaatgttgtatatcaatcaTGAATATTAAGCATCAA---T---TTTATGCCATTGAGGACTAACAGATG---ATCAGTTAAC--------CTAACCAT----TCTT-T--C-----CTG--TGA--T--C-cttactagatgggagtgatgcatattaacataaatgatacccttctttgaactatcattaaaaatataaaaggtttagtaccgtttaaatt
gi|17 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttatAT----CCTT-A--C-----CTG--GAA--C--CCAGG-CCT-GGTACAG-TCAGTCAGTAGCACGTCTGACTATCAA--C-----AGAGAGTAGTGAGTTTGAAT-TCCTGCCCGGCAACAGTC----TCC--ATGATGATTGATATA----A--GACATAGCATCTCATT----ATCAATCATCTCTCACTGCTGATTCAAGTGAAAAA--TTT---AACAAATACTTGTGGAGAT-GGATATGCTTGAGTACA--GGCTAACCTTC---CAG-GATCACAGGAAAG-------AATGGTTAGGTTAACT-GA--------------T--------------C--------------ctggaaggttagcctgtactcaagcatatccatctccacaagtatttgttaaatttttcacttgaatcagcagtgagagatgattgataatgagatgctatgtcttatatcaatcatcatggagactgttgccgggcaggaattcaaactcactactctctgttgatagtcagacgtgctactgactgactgtaccaggcctgggttccaggtaaggattcatgactactt
gi|18 : ccagacccattcacaaaacagagaaaatgaacattgtctgatacaagtaagatccagttaaggaattctttttattgaatattaagcatcaattttatgccattgaggactaacagat--C--C-GGG-CCT-GGT-TAGCTCAGTCGGTTACGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTCGAGT-CCCCGCCCGGCAACAGTG----TCC--GTGATGATTGATATA----C--GACATTGTGTTTCATA----ATCATTTGTCTCTGATCGCTAATTCAAGTGGGAAA--GTC---ATCAGCTACTTGCGGAGATGGGGTGTGCTCGAGTACT--GGTTAACCTTT---CAG-GATCCCAGAAAAC-------TGTGGTTAGGTTAACT-GA--------------T--------------C--------------GTCTGTTAGCGTTCGGTGGCATACAAA-------------------------TG---G-----------C-----------GC---TAGATATTCAATCAATA-AA--TCtcatgactactt
gi|19 : aatttattgaatatgttgttgaagtatgtttcagttgggaT----TCTT-T--CAGTCGCAC--GGC--C--C-GG--CCC-GAT-TAGCTCAGTCGGTTACACGTCTGACTATCAATCC-----AGGG-GTCGTGAATTTGAAT-CCCCGCCCGGCAACAGTC------C--ATGATGATTGAAATA----C--GACATTGTGTCTCATT----ATCATTTGTCTTTCACCGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTCAAGTACT--GGTTA--------------ATCCCAGGAAAT-------AGTGGTTAGGTTAACT-GATTGTCTGTTAGCCCT--------------T--------------G-------------------------A-------------------------TG---G-----------CATAAAAATGATGC---TAAATATTCAATCAATC-AA--TCcttttttgttgggggaatgttgttgattacaaatatacaca
gi|2 : tcaaagaacttatcggcagcgactgaaaCATTGCGTCTCATTGAGTATCATTCAACTATCTCTGCTACTTCA--TGAGAAAATGTT---ATCATTTACATGC------GGGGCGTGTTCGAGCACC--GGTCA------------------CAGCAATT-------AGTTGTTAAGTTAACT-GG--------------T--------------T--------------GCCTTTTAGCCCTCC-----------A-------------------------TG---GCAAAAATTGA-C-----------GC---TAAATATTCAAACAATCAAA--TCAAaagaaaaatgcagagtatttacagagagaacgagatcgaataag
gi|20 : agtattacaaataatttatataccgatatattctttttttattgataaactcagattttgaagttcatctgcagtatttatagagacatgtacttttgaaacactaaacacatagccaatggttttaaaagtgtcctgtttccatgatagatattcctctgttagtccaaatatgcaggaaaaatatatggttggcaagatttttttttctcacaaattcaatggtttgctgacaccgcttcatatttgacaattctgcccatttgttgcagtttatctttacgcatctttacactgctatttctgcatccaacactttccaatgtcatccaaacgtgacagaactaatgaaaatgttcaaatatgtacaaagaaatatgaccattttaagcaatttcaacaaaaacatatcaatcgatatacaaagcatgtgtgcatttatgcT----TCTT-T--C-----AGG--ATG--C--C-GGG-TCT-GAT-TAGCGCAGTCGGTTATTCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTGGAAT-CCCCGCCCGGCAACAGTC----TCC--TTGATGATTGATAAA----A--GACATTGTGACTCATT----ATCATTTATCTCTCACCGCTGATTgattgatagtaaggtgtcac
gi|20 : AGT-CCCTGCCCGGCAACAGTC----TCC--GTGATGATTGATATA----C--GACATTGTGACTCATT----ATCATTTATCTCTAACCGCTG--TCATATGTGACC--GTT---Aatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagttaacggtcacatatgacagcggttagagataaatgataatgagtcacaatgtcgtatatcaatcatcacggagactgttgccgggcagggacttaaccaaagagactggtaggctactagtatattaaaatttc
gi|21 : aatcagcggtgagagataaatgataatgagtcacaatgtcttttatcaatcatcaaggagactgttgccgggcggggattccaactcacgacccctggattgatagtcagacgaataaccgactgcgctaatcagacccggcatcctgaaagaaatcaagctacatatgaagtgtgaaatggcatcttttttgtggctgtcaaaatatgaacccgtttaagtAGACG---ACTA--TGAT--------CT--CAATGTACTCTT-TGAT-----CTA--G----C--C-CGG-CCC-AAT-TAGCTTAGTCGGTAGTGCGTCTAA--ATCAATTA-----AGGG-ATCGTGAGTTCGAAT-CCCCGTC----------------------------TGAT-CA----C--AACAATTCGTCTCATT----GTC-TTCATCTCTCATACCTGATTAAGGTGGGATA--GTT---ATCAGTTAATTG-----------TGTGTTTGAGTACT--GGCTCATCTTCACCCGGTGATTCCAGGAAAT-------AGTGGTTAGGTTAACT-GA--------------T--------------C--------------GT------------------------A-------------------------TGCTAG-----------C-----------CCTCTTAAATGTTCAAACAAAC-Ataaccaaagagactggtaggctactagtatattaaaatttc
gi|22 : taaagcggcacagagcaaagacttcAGTAGGAAA--GTTGTAATCAGTTATTTGCGAAGATGGGGTGTGCTCGAGTACT--GGTTTAGCTTT---CAG-GATCCCAGGAAAA-------AGTGGTTAGGTGAACT-GATTGTCTGTTAGCCCT--------------C--------------G-------------------------A-------------------------TG---GCATAAAAATGAC-----------GC---TAAATATTCAATCAATC-AA--TCAagggacgtgtcacttattgt
gi|23 : tgctgtttattaattgtttcttattgtctcaatacatgtgtgtagggaaatcccaatattttatatgaacctaattcaatttttatataaataatctatcatgtgttgttttctgaacagtcagaacgaA--C--T-GGA-TCCTGAG-TATCTCAGTCGGTAACGTTTCTTACAGTCACTCA-----ATGG-GTCGCGGATTTAAAT-C
gi|25 : atctctgcaagtcactgacttcttccccaagtcactgatttcttcctcatatagacactcctgagagattcgtggctacatatcatagatcctgacaaggatt--GAA--C--T-GTG-CTT-GGT-TAGCTCAGTCGGTAGTG--------TATCAATCC----------------AGTTTGAAT-CCCGAACAGGCAAGAGTtgtgcataataaagattgttccaaatggcgatgagtatatatttc
gi|27 : T----TTTT-T--C-----TAG-------C--C-GGG-TCT-GAC-TCGCGCTGTTGGTAATGCGTCTGTTTGTCAGTCC-----AATA-ATCGTaaattagtatcacaaaaaccatgaggtgttatttata
gi|28 : GCGTCA----T---TTTATGCCATCGGGTGTTAACATTTG---ATCAaatgtagcgaatatcatagtacgaaa
gi|3 : tgaccgccatttttccaaacaggtttgatttgtttgaataaaatTCAAAT-CCCCGCC-GGCAACAGTC----TCC--GTGATGATTGATATA----A--GACATTGTGTCTCATT----ATCATTCGTTTTTCACTGCTGATTCAAGTGGGAAA--GTT---ATCAGTTACTTGCGGAGACTGGTTTTGCTTGATTTCT--GGTTAACCTTT---CAG-GATCCTAGGAAAC-------AGTGGTTAGGTTAACT-GATCATCTGTTAGCCCT--------------C--------------G-------------------------G-------------------------TG---GAACAAAAATGAT-----------GC---TAAATATTCAATCAAAC-AA--TCAATTtct
gi|30 : aaacggagtgatagaggcattcaatgaaaatgcagtataaagtaaagtatcaaaaataaaagtatattcaaatctaacaaccatttgatggcactgagttagttcacagcgtggatatggttatactgattCC-GGC-TAGCTCAGTAG----CGCTTCTGGCTGTAAATCT-----TTGG-GTCATGCGGTCCCAT-CCCCGCCTGcccttatatgaccactatacatccctacccatcagatagtccaaacttcagtcccttactcatgttcatgtagagatttgctatgatcagacaatgcattagacctcgattctcatacaaatggatacgaaaatgaaaaaaaatccaattttctaatatgatttcaatgtaaaatctcacatatatgaaaagcatttgaatataactggcctagtggtttcagagaaagtactgctaatggacaacacacaa
gi|32 : -CCA-GGT-TAGCTGAGTCTGCAGTGTGTCTAACTATCAATCC-----AGGG-Gaacaggcttaatatat
gi|34 : g-CCT-GGT-CAACT--GTCAG---CGGGTCTGACTATCAATCCTGACTAAGG-GTTGTGACTTgagccatttcacaaaaaaaattacaataa
gi|36 : ttaaAAC--------CC--CCAT----TCTTAT--TGG---CAG--GCAG-C--T-GAG-CCT-GGT-TAGCTCATTTGGTAATGTGTCTGACTacaggctg
gi|38 : GAATATTTAGCGTCAT---T---TTTATGCC
gi|39 : tgtttgttaTATTAAGCATCA----TCGTTTTATGCCAGCAAGTGCCAACAGACA---ATccatggattgatagtca
gi|4 : A--C--T-GGG-CCT-GTT-TAGCTCAGTTGGTTACATGTCTGACTATCAAGCC-----AGGG-GTTGTGAGTTCGAAT-CCCCAACAGACAACAGTC----CCC--ATGATAATTGATATA----C--GACATTGTGTCTCATT----ATCATTCATCTCTCACTACTGATTCAAGTGGGAAA--GTT---AACAGTAACTTGCAAAGAT-TGGTGTGCCCGAGGGCT--GGTTAACC-AT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GA--------------TCATCTGTTAGCCCCC--------------A-------------------------A-------------------------TG---G-----------CATTAAAATGATGC---AAAATATTCAATCAATC-AA--tttagt
gi|41 : tacatatattcatatatttttttggttggtaacttgaaaacagttaatttcaaatacagtttccggttaaatatataaaagtattttcctctccattttttgtgcacttttacgagtaggtCAGCTACATGCAAAGATGGA-TGTGCTCGAGTACTCAGG-TAACCTTT---ttatgagtaggaagacatctgagaagtatttataagaaaagttttagcaaatttcatgagctaaaatatcctgttgtataagtgtatcagtgtatatgcaaccatgtcttgtttaggtgtatatttgctatgttattgtaaaagtgactt
gi|42 : ATATTTAGCATCATTTTT---TTTTTGCCATAAAGGGTTAACAG
gi|44 : GGAGA-GGGATGTGCTCGAGTACT--CGTTAACCT-----------TCCCAGAAAAtctat
gi|46 : GCATCA----T---TTTATGCCATCGGATGTTAACAtg
gi|5 : --C--C-GGA-TCC-GAT-AAGCTCAGTCGGTAACGCGTCTGACTATCAATTC-----AAGG-GTCTTGATTTCGAAT-CCCCTTCCGGCAACAGTC----ACC--GTGATGATTGATATA----C--AACATTGTGTCTCATT----ATCATTCGCCTCT-A-CACTGATTAAAGTGGAAAA--GTT---ATCAGTTACTTGCGGAGATGGGGTGTGCTAAAGTGTT--GGTTAACCTTT---CAG-GGTCCCAGGAAAC-------AGTGGTTCGGTTAACT-GA--------------T--------------C--------------G-------------------------ACTGTTAGCCCTCGATGGCATAAAAATG---A-----------C-----------GC---TTAATATTCAATCAATC-AATCTCAATTtttgat
gi|6 : aaataattacatacctatactatatcaaaagaatgcaattaaacataagctgacttgtctgtggaccagtatctaatttttaaagggaatgcaggatggatgtaacgtcattttaaTGAGTATTTAACATCA----T---TCTATGCCATCCATGACTA-CAGCTGTAAATCAATTAACATACTAATCC--CCAT----TCTT-T--C-----CAG--GGA--A--C-GGA-CCC-GAT-TAGCTCAGTCGGTAATGCGTCTGACTATTACTCC-----AGGG-GTCTTCAGTTCGAAT-CCTCGCCCAGAATCAGTC----TCC--GTGGTGATTGATATA----C--GACATTGTGTCTTATT----ATCATTCGTTTCTCACCGCTGATCCAAGTGGGAAA--ATT---ACCAGTTACTTACGGAGATGGGACGTGCTCGAGTATT--GG-TAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTATGTTAACT-GA--------------T--------------C--------------G-------------------------A-------------------------TG---G-----------C-----------GC-------TATTCAATCAATC-AA--TTAATTCCTGGGATTGTGGTATTTTAACCGGTACTCAACCACACCCATCTCGGCTGACAATTTGGTGAGAGACGAATGATAATGAAACGCAGTGTTGTAAAGCAATCATCACATAGGCTGTCGCTGGGCGGGGATTTAAACTTGCGATcttttgaaattgggatatataaatataattatgtttatggaagatttctatatctctcaaagcagattatataacatgtatacatgcaagcaagcattttgaatgtggtttaacgccattaataacac
gi|7 : tatgtcggcgttagtactaatctgacagaaa--C-GGG-CAC-GAT-GAGC-CGGTCAGTTATGCGTCTGACTATCAATCC-----AGGG-GTCGTGAGTTTGAAT-CCCCGCCCGACAGCATTC----TCC--TCGATGACTGATATA----C--AACATTGTGTCGCATT----ATCATTCGTTTCTCACTGCTGGTTCAAGTGGGAAA--GTT---ATCAGTTACTTGCAGAAATGGGGTGTCCTCGAGTATT--GGTTAACCTTT---CAG-GATCCCAGGAAAC-------AGTGGTTAGGTTAACT-GATCGTCTGTTAGCTCT--------------C--------------G-------------------------A-------------------------TG---GCATAAAAATAAC-----------GC---TAAATATTCAATCAATC-AA--TCAgatatgtcttggttgt
gi|9 : aatttgatttctaatgagtgtgaacttaacctaagccatgaaaattgttttctcaatgcatcatctattttatcattataagcgtaataataaaatgaggccttaaattttgtataataatcaagttgagacatgtaCA----T---GTAATGCCATCGAGGGCTAACAGACG---ATCAGTTAAC--------ATAACCAC----TGCT-T--C-----CTG--GGA--T--C-ccatattatgtatgaattgatcatatatcatccctttagtaatggtaaatacggtcaaacctgtataagtggtca
gi|9 : TT-T--C-----TAGCAGGATGC--C-AGG-CCC-GAT-TAGCGCATTCGTTTATACATCTGACTATCAATCC-----AGGG-GTCGTGAGTTGGAAT-CCCCGCCCGGCAACAGTA----TCT--GTGATGATTTATATA----C--AACATTGTGTCTCATT----ATCATTCGTCTCTCACCGCTGATTTAAGTGGGAAA--GTT---ATCAGTTACTTGCAGAGACGGGGTGTGCTCGAGTACT--GGTTAACCTTC---AAG-GATCCCAGGAAGC-------AGTGGTTATGTTAACT-GA--------------T--------------C--------------G-------------------------cttgaaggttaaccagtactcgagcacaccccgtctctgcaagtaactgataactttcccacttaaatcagcggtgagagacgaatgataatgagacacaatgttgtatataaatcatcacagatactgttgccgggcggggattccaactcacgacccctggattgatagtcagatgtataaacgaatgcgctaatcgggcctggcatcctgctagaaatcaagctacatatgaagagagaaatggcatcttttttgtgactgtcaaaataagaaccagtttaagttaacgttcacgtatgacagtagatcatcatatttacatgtacacgtcgtatatgctgaagacatgctggtatatactggtacatatgttattgtaaaatgtggatt
11 sequences could not be aligned to this reference sequence:
Unaligned ( gi|8 ): AAAAAAAAACTATATTTGCTTATCATAACTACATAAACATGCAATAGAAACATCCATGTCAAGTTTCAGTTGAATTGGCCTAGTGGTTTCAGAGAAAGTGCTGCTAACAGACGACAGACGACGGATAACGCGCAATCATAAAAGCTCTTCTGGCCAAAAAAAAGGCTTATGTAATTTGGTTTTGAAATATTTCAAAATGGTTCATAATGCTTGTGATTTCTTGCTGCAGATGAGTAGAACAAAAGTTGGCATGGCATATACTGCAATAAGACATCACTGGTGTCAAGAAAGTGAATTTTATAAGAATTCAATATATGCATTTATTGATGAGCATTCATTTTTCAAAAAATCTCAGGGTTCACTGCACCCCTTTAAAACAAGAGGCCCAAGAGGGCCTGAGGACGCTCTACTGACTCATAGTGGCCATAGCACTTTTTGAAATTCTACTATGCAATAGAAAT
Unaligned ( gi|24 ): ACTCCCTACCCTTGGATTAATGCTCAGATTGCTACCAACTGAACTGATAAGACTGCGAGTTGTGTTTGAAAATAATTTGTTTTTATTTTGATACAGTTGTTTGAGGCAATT
Unaligned ( gi|26 ): ACATATATTCGTTTTTGTAGGTAAATTGAAAACAGTTAATTTCAAATACAGTCTCTGGTTAAATATATAAAAGTATTTTTCTCTCCATTTTTTGTGCACT
Unaligned ( gi|29 ): TGAGAAGTATTCATAGGACAATTTTTAGCAAATTCCATGTGCTGAAATCTCCTGTTGTATAAGTGTATTAGTGTAGGCGCAAC
Unaligned ( gi|31 ): TATGGAGATATTTGTGCTGGAGTTCTAGTTAACTTTCCAGAATTCCAGAAACGAGTTGTTATGTTGACTGGTACTCT
Unaligned ( gi|33 ): TAAACAATATATAACATCAAGAGAAACAACCGGTATTACATCTAAATAGCGTGTTTTTGGAACGTTTTTAT
Unaligned ( gi|35 ): AGGATGACAAAACTTGTTTGTTTGAATGCTTAGTGTCATGTTATGACATCAAGGGATAATATGC
Unaligned ( gi|37 ): GTTTGTTGGAATATTTAACATAATTTTTATGCCAAAGAGAATGATGATCATC
Unaligned ( gi|40 ): AATTGATTGTTTGAATTTGTTTAAATATTTAGCATCATTTTTATGACA
Unaligned ( gi|43 ): TGTTTGTTTGAATATTTAGCATGATTTTTGTGCCATAAAACAAAAC
Unaligned ( gi|45 ): AGTCCTTTATGATGCAGTTGAGATAAGATAATCCAATG