lowQualScore : 111111111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 2 66666666 111111 1 33333333333 33333333333333 11111111 33333333333333333 11111 111 1111 1111111 1111111111 1 1 1111111 11111 222222222222222 1 2222222 11111111111111111 000000000000000000000000000000000000000000000000000 2222222222 11 11 111 11 22 2222222222222222222222 222222222222222222 1111 111111111 111111111 333333333333 111 1 11 1 1111111111 11111 444444444444444444444444444444 1111111 11111 1 3333333333333333333 222222222222 222222222222 111111 3333 7777777777 1111111 333 111 222 1111 6666666666666666666666666666666666666666666 111111 11 11 111 1 111 1 1 6666666666666666666666666666666666666666666666666666666666666666666666 1 6666666666666666666666666 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 11111 1 3333333333333333333333333333333333333333333 11 111 22 111 111111 333333333333333333333333333333333 1 111111111 111
lowQualScore : 3 55 5 0 33333333 9999 4 4 8 222222 4 4 6 11 55 777 4 55 2 00000000000 33333333333333 5 88888888 5 11111111111111111 1 7 11111 666 8888 7 4444444 4 4 5 7 8 77 0 9999 4 0 2 66 9999999999 66 2 7 1 66 5 0 6 00 777 99 888 5 6666666 88888 0 999999999999999 666 6 4 6 3 4 2222222 88888888888888888 1 999999999999999999999999999999999999999999999999999 44 3 4444444444 44 4 55 1 4 00 000 8 5 4 4 5 00 00 6 4 1111111111111111111111 44 555 444444444444444444 0000 333333333 666666666 44 77 333333333333 0 7 999 7 6 33 2 33 3 3 666 1 33 0 3 888888 3 9999999999 88888 1 999999999999999999999999999999 44 0000000 1 4 1 4 1 22222 66 1 3 5555555555555555555 88888 4 3 666666666666 555 6 666666666666 88888 000000 1 4 1 2 2222 11 1111111111 5 3333333 222 0 4 000 4 111 4444 0000000000000000000000000000000000000000000 666666 5 00 88 999 8 6 4 5 2 77 4 000 5 5 3 3 1 4 4 66 3333333333333333333333333333333333333333333333333333333333333333333333 77 1 55 0 66 7 0 2 0 3333333333333333333333333 0 6 6 88 3 1 666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 66 555 11111 3 66 4 7777777777777777777777777777777777777777777 11 000 33 77 99999 333 5 999999 333333333333333333333333333333333 3 3 4 0 3 5 1 8888 0 7 4 2 6 6 4 888888888 4 333
lowQualScore : . .. . . ........ .... . . . ...... . . . .. .. ... . .. . ........... .............. . ........ . ................. . . ..... ... .... . ....... . . . . . .. . .... . . . .. .......... .. . . . .. . . . .. ... .. ... . ....... ..... . ............... ... . . . . . ....... ................. . ................................................... .. . .......... .. . .. . . .. ... . . . . . .. .. . . ...................... .. ... .................. .... ......... ......... .. .. ............ . . ... . . .. . .. . . ... . .. . . ...... . .......... ..... . .............................. .. ....... . . . . . ..... .. . . ................... ..... . . ............ ... . ............ ..... ...... . . . . .... .. .......... . ....... ... . . ... . ... .... ........................................... ...... . .. .. ... . . . . . .. . ... . . . . . . . .. ...................................................................... .. . .. . .. . . . . ......................... . . . .. . . ............................................................................................. .. ... ..... . .. . ........................................... .. ... .. .. ..... ... . ...... ................................. . . . . . . . .... . . . . . . . ......... . ...
lowQualScore : 7 22 0 0 55555555 4444 4 4 4 888888 4 4 8 88 55 000 0 55 2 11111111111 44444444444444 0 11111111 0 33333333333333333 9 0 11111 999 3333 0 8888888 4 4 5 9 0 44 1 4444 4 6 7 11 4444444444 11 9 8 9 11 0 2 0 99 111 22 888 0 2222222 88888 4 111111111111111 111 2 8 9 7 1 9999999 55555555555555555 3 000000000000000000000000000000000000000000000000000 77 7 7777777777 99 0 55 4 0 33 444 2 7 0 0 3 11 77 0 0 1111111111111111111111 55 444 999999999999999999 4444 333333333 777777777 00 99 222222222222 4 2 555 4 0 66 8 99 2 1 222 4 11 8 4 888888 1 7777777777 11111 4 333333333333333333333333333333 66 8888888 2 0 5 0 1 66666 11 6 6 7777777777777777777 11111 2 3 444444444444 555 2 555555555555 00000 555555 2 4 1 0 0000 99 6666666666 0 3333333 111 7 3 000 8 222 2222 6666666666666666666666666666666666666666666 444444 0 77 77 333 5 7 8 7 1 99 0 000 4 0 8 8 0 4 3 11 0000000000000000000000000000000000000000000000000000000000000000000000 99 9 11 1 11 0 1 4 5 2222222222222222222222222 2 5 0 11 0 1 999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999 11 444 11111 3 11 0 8888888888888888888888888888888888888888888 00 444 44 55 11111 000 9 888888 000000000000000000000000000000000 3 3 5 2 3 7 9 9999 7 1 0 6 0 9 0 444444444 0 555
consensus : GTATTCCATCCATAATACTCAATGTTT-A-AAAACTAAAAAAACTTTTTA-TT----T-C-ATTTTC------CACATTAAATTCTGGATT-CAA-TCCCAAATTTTTA--GG---A-A--CTTTTAC-----TTT---TGTCCAAAG------------TACAA-TAT--------TCTG-AC---TNAA-G--------TCTTCCATA-----TTCAT-TTGGTT---ATTTTTT----TANT-C-ATTTCTTACAAAACATCTATTGTTATATACN-AGTAAGTAGACAAAA----CATCG-GAGATTACA--A----------ATATG--GCAANAATATTTCA--TTACAGGATCAG-AAAAAAA-TGTATG--TTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTT-N--CTTGTC--ACACTTTA---AAATAT-A-ACATATTGCAATAAGTNATCCTGAC------ATCAAA---------A---T---ATAAAA-------N------------GCAC-----------A---------------TTAACT-TTTTTAATACATCAACTG-------ATAATGCAA-AAA--TACCA-ATATATTAAAC-TTTTACCGTCTAAAA-TT-AAAAACAAATAG-AATATAA-TACCCCTA--CC----C------C--CT-TT---TT--T--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTA-ACAT-------G---TTACAATACGTTGTCCTGACATCAAATTATAAAATATAC--CATAGAAAAA-GT--ATATTANCTTTCTTAATACATCAGCTGACAAT------G-TAAAA---------ATACTAATACATC-AAACTTTTACCGTCT-------------AAAAT--T---------T--A-------GAATATTG-TACCCCT-ACCCCATTT-CGGCT--TTTTGCCAATTT-TGACAATTTT--AAAGGGTNTCAT----GTTACA-ATTA-G-------TTAGCC-TGATATCAAA------------TACT---AGG------TACAGCAGATCAA-GCAAATTATCCTTCTTACTATATCAATTATTAAT--T-TAGACTTTCTTCTG---AAAAA--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACA------TACAAATN-ACCA-CGAGTCCCTTTTTTCCATT-TCCCCGAACACNATTTAA--ATGT---CACTGGAAA-GGGNCATACAGCAACATTTACACGT-AGTAAGA--C------TG------------GAA---------C-----------CG------------A---TTC-T-C-GA-CCACACTGAGCTGTC-TAACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCAA---AA---A----CAGGCAAT----CGTCATTATCCCACAATCTTTA-TTCTTTAANAATATGACCACCGA----------------------C---------------------AT-----------------------A-----------------------ACCGTAA--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAA-A----ATCA--CGAAT---GATAATAA-CTTG------G----TAACT--CGTG--TGTAGAAAATTAAAA-----GTCTAAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTANGAA-AA----C-AA-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCA-AGTTACGGACTTATCCGAAGTTACCC-GA----T----TT-T-T-CCGATTTCGTTATGGA
Reference ( gi|2 ) : GTATTCCATCCATAACACTCAATGTTT-A-AAA-CTAAAAAAAAAT---A-TT----T-C-ATTGTC------CACATTAAATTCTGGATT-CAA-TCCGAAATTTTTA--GG---A-A--CTTTTAC-----TTT---TGTCCAAAG------------TTCAA-TAT--------TCTG-AC---TAGA-G--------TCTTCCGTA-----TTCAT-TCGGTT---GTTTCTT----TAAT-C-ATTTCTTATAAAACATCTATTTTTGTATACT-AGTAAGTAGACAAAA----CATTG-GAAATTATA--A----------ATATG--GCAAGACTATTTCA--TTACAGGATCAG-AAAAAAATTGTATG--TTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTT-C--CTTGTC--ACACTTTA---TAATAT-A-ACATGTTGTAATAAGTTATTCAGAC------TTCAAA---------A---T---ATAAAA-------T------------GCAC-----------A---------------TTAACT-TTTTTAATACATCAACTG-------AAGATGGAA-AAA--TACCA-ATATATCCAAC-TCTTATCGTCTAAAA-TT-AAGAGCAAATAT-AATACAA-TACCTCTA--CC----C------C--CT-TT---TT--T--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTA-ACAT-------T---CTACAATACGTTGACCCGACATCGAATTATAAAAAATAC--CACAGAAAAA-GT--ATATTATTTTTCTTATTACATCAGCTGACAAT------G-TAAAG---------ATACTAATATATC-GAGTTTTTACCATCT-------------AAAAC--T---------T--A-------GAATATTG-TACCCTT-ACCCCATTT-CGATT--TTTTGCCATTTT-TGACCATTTT--AAAGGGTTTCAT----GTTGCA-AGTA-G-------TTAGTC-TGATATCAAA------------TACT---AGG------TACAGCAGATCAA-GCAAATTATGCGTCTTACTATATCAATTATTAATTATCTAGACTTCCTTCTG---AAAAA-TACAACAA---CTAGTTTTGGGTTTACTTACGCCA----ATGT---A----TGT-C-------TGGCA------------------ATTCACA------TGCAAATT-ACCACCGAGTCCCTTTTTTTCATT-TCTCCAAACACAATTTAA--ATGT---CACTTGAAA-GGGACATACAGCAACATATACATGT-AGTAAAA--C------TG------------G-----------C-----------CG------------A---TTC-T-C-GA-TCACATCGAGCTGTC-CAACATGAACGTTCTATATTTTAACCCAGATAAAGGTTATCAA---GA---A----CAT----T----CGTCATTATTCCATAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT-----------------------A-----------------------ACCGTAA--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAA-A----AGTA--CGAAT---GTTAATAA-CTTG------G----TAACT--CGTA--TGTAGAAAATT--AA-----GTGTGAATCATCTTCGACGATTGCATTTTC----CTAAGAAAAC-C--CTATGAA-AA----C-AA-GCATCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCTA-ATTTACGGGCTTACCCGAAGTTACCC-GA----T----TT-T-T-CCGATTTCGTTATGGAA
gi|3 : GTATTCTATCAATAATACTCAATGTTA-A-AAAACTAAAAAGACTTTTTACTT----T-C-ATTTTC------CACATTAAATTCTAGATT-CAA-TTCCAAA-TTTTA--GG---A-A--CTTTTAC-----
gi|10 : agGTATTCAATCCATAATACTCAATGTTT-A-AAA-CTAAAAAAGGTTTT-A-TT----T-C-ATTTTC------CACATTAAATTCTGGATT-CAA-TCCCAAAGTTGTA--GG---A-A--ATTTCACCGGA-TAT---TGTTTAATGTTTTATGTATTTTTCAAGTATACTCCCTCTCTG-TC---CAAA-GTACAATATTCTTACTTAAATCTTCCATATTGATTTA-GTTATTTGTTTTAAC-C-ATTTCTTACAAAACATCTAGTGTTATATACT-AGTAGGTAGACAAAA----CATCG-GAGATTACA--A----------ATATG--GCAATAATATTTCA--TAACAGGTTCAGAAAAAAAAATGTATG--TTAGATCTTCATTTTCATTAATATT-ATAA---AATGGGCA-T-------TTA-A--CATGT----CACTTTG---AATTAC-A-ACATATTGCAATAAGTAATCCTGAC------ATCAAA---------A---T---ATAAAAGG-----TACAGTTGACAAAGCAC-----------A---------------CTAAC--GTTTTAATACATTAACTGTTAATGCAAAATACAA-AAATGTACCA-ATATAGTAAAC-ATTTACCGTCTAAAA-TT-AAAAACAAACAC-AATATAATTACCCCTA--CC----A------C--CTATTAAGTT--T--AAccgtatatttcttcaattatagtgtattttataagcaaaccccatttctgtccaaggaacaacattctgactcgcgtctgtcatattcatcaggttattttttttattcatttcttacaaaacatatattgttatatatcagtaatagacaaaacaacggaaattacaaaaatggcaagaatatttaattacaggatcttactttaaaatataaaaagtacagtagaaaaagcacattaacttttttatacatcaactgataatacaaaaataccaatatattcaactttaaccatctaagattaaaaacaaatataatataatacccctacccccttttaaacttttttttgccaattttcgaaattgacatgttacaataattgtcctgacatcaaattataaaatataccatagaaaaagtatatcatccttttaaaacatcagctgacaatgtaaaaatactaatacatcaatctttcaccgtctaaaacttacaatattgtacccctaccaaatttcggatttttgcaaattttgacaatttaatagggtgttatgtttcaattagttagcctgatatcaaacctgatatcgagtactaggtacagcagaccaagcaaatgatccttcttactttatcttacttctaaaaaaactaatttttggtttacatcagccaatgtgtgcctgccatttttcagtatttagtctattcacaaacacattaccaacaagtcccttttttcttttcctaccaacacaatttaaatatcactagaaaggggcataagcaacatttatgcattgtaagactggaatttggaaaagcaacgtttctccgaccactctgagctgtctaacatgaagtttctacatttcaaaccagattaaggtaatcaaaacaggcaatcgtcattatcccacaatctttattctttaacaatatgaccacaggcatcacagtgatcaattaagtcatgcaaccataaaactaaatggtacgaaaagcacgaatgataatattttataacacgtgtatagaaaattaagtctaaatcctcttggacgcatgcttttttataagaaaagcctcagaaaacaaagcgtccctggtgatcaagactgaaaaatcaggaaaattcccaagttacggacttatccgaagttattcgattttttccaatttgtg
gi|13 : TATTCCATGTATAATACTCACTATTT-ATAAA-CTGAAATAAACT------T----T-C-ATTCTC------CAGATTTAACTCTACATT-TAACTACAAA--TTTTA--GG---A-A--CGTTTACCGTATTTTATCTGTCCAAAG------------TACAA-CAA--------ACTG-AA---AGAA-G--------CCTTCTATA-----TTCAG-ATGGTT---ATTTGTT------AT-CCATTAATTAAAAATCATCTATTGTT--ATACC-AGTAACTAATCAAAA----CATTG-GAGATTACA--G----------ATATG--ACAATAATACATCA--TTACAGGATCAG-AAAA----TGTTTG--GTAAACCTTCTTATTCAATAACATC-ATCA---AGTG---A-T-------TTT-T--CTCGT----CACTTTA---AAATGT-A-ACATGTTGCATTAAGTTAATCTGAC------ATAAAA---------AAGGT---AGAGAA--------------------GAAA-----------A---------------TTCACT-TTacatatttattttataattt
gi|4 : ATTCCATCCATAATACTCAATGTTT-A-AAAACTAAAAAAAACA---C-TT----T-T-ATTTTC------AACATTCAATTCTGGATT-TAA-TTCCAAATTTTTA--GG---A-A--CTGTTAaa
gi|1 : ATTCCATTCATTATACTCAGTGTTG-A-AAAACTAAAAAC---T---C-TT----T-TTACTGTCTTTTAACACTTTAAATTCTGAATT-CAA-TCCTAAATTTTTA--GG---A-A--CTTTTAaagtatatttttccgtttggggtgtaatttataagtatacctcttctctgtccaaagtactatattctgtctcaagtctgctatattcatttggtcagggttttttttcgtttcttacaaaacatctatttttatattctagtaagtagacaatcaatgaagattcgaatatggcaataatattttattacaggatcagaaaaaaaatgtttgttagatcttcatatccataaatatcataaaacaggcattttacttgtcattttaaaatataacatattgaaattaataatcctggcgtcaatttcaaaatggaacagaagaatatgtactgtttttgctacattaactgttgatgcaaaaatacaaatataataaaagtttaccgtcttaaattaaaaactaatagaatataataccccaaccctctttttaacttttgccaattttcgaatattaacatgtcctgacatcagactataaaatataccatagaaaaagtatatcatctttcttaaaacgtcagttgacaatgtaaaaatactaatatatcaaacttctaaaacttgaaaaaaaaatagaatattgtacccctacttcatttcggctttccgccaattttgacaatttcaaagggtttcatcttacaattagcctgatatcaacctgatatcaaatactaggtagatctacaggagatcaatagatttatctttcttactatatacattatatagactttcttaaaaaaaaactaattttgggtttacatccgccattgtgtgtctgccattttacatttttttgtcaattcacaaacaaatactttttcatttcccaaacacaatttaagtgtcactggaaagggacatacagcaacatttaggcgtagtaagactggagtcgggaaagtcaacgattctccagccacactcagttgaacattcaacattttattccagattacggttatcaaaaacaggcaatcgtcattttcccacaatctttatcctttaacaatatgaccatcgacataacagtaattaagtgattcatgcaaccgtaaaacattgtgtttgaagacgatttattcgtgaaatgtcacgaaaaccacgatcgtgtgtagaaaattaaaagtctaaatcatttccg
gi|20 : TTCATCCTTAATACATAACGTTTGA-AAA-CTGTAAAAACATCTTA-TT----TTC-ATTTTT------CAAAATAACTTCTGGATT-CAA-TTCCAATTTTTTA--GG---A-A--CTTCTCC-----CTT---tcgtatatttttttcaattttggtttattttacaagtataccccctctgtgtgtaaggtacaatattctgactcaagtcttccatattcgttttttttttttattaatttcttacaaaacatcttttcttatatactagtaagtaggcaaaacattggagattataacaaaatacaaatacggcacgaatattctattttataatcagaaaaaaatatagatcgtcatatgcattaatataaaatgggcattttatttgtcactttaaatatgacatattgtaatactcctgacatcaaaatataaaaggtacagtagagaaagcacattaactgttttaatacatcaactgataatgcaaaaataccaatatatcaaacttataccgtcaaaaattaaaaacaaatagaatattataccactacaaccgttttgacttttgccaaatttgccaattttcgaaatttaacatgttacaatacgtcgccctgacatcaaactataaaatataccacagaaaaagtcatcatctttcctaatacatcagctgaaaatgtgacaatatttatacatcaaagttcatcacattgaaacaattagaatattgtacccctaccccattttggctttttgtcagttttgaagggtttcatgttacaattagttagccttttatcaattactaggtatggcagaccttcatactatatcagttatataaactttcttctgaaaaaaaaaacaacaacatctagtgtttggtttacatccgccaatgtatataaaaacaattcaaattcactggaaagagacatacagtaatatttacacatagtaagactggaatctagaaagtcaaacactctccgaccatactgacctgtctaacatgattgattttaaacaaaaacaggaaatcgtcattatacaatctgtattcttttaaaatatgaccaccgacgaaacagtgatcaattaattcatgcaaccgttaaacattgtggttttagacgatttattcgtgaaatgtcatgaaaatcacgaatgatacaattttgaaaactggtgtgaagaaaattaaaagtcttaatcattttcaacgcttgatttttttaataaaatactaagaaaagcaagcgtcccagatgatcaaggcttaaaacatagggaattttccaagttacgaacgtgtccgaagttaccctgttttccgatttaatcatagacgaaa
gi|9 : aCCATCCATAACA--------------AA-CTAAGAAAACTTTTTACTT----T-C-ATTGTT------CACATTAAATTCTGGATT-AAA-TCCCAAATTTTTA--GG---A-A--CTTTTAC-----Tatatttgttctgttttggtatactttataagtatatctcctctctattcaacgtacaataaaaggacacaagtcttccatattcagttgattatctttttattaatttct
gi|12 : ATGTTT-A-AAAACTAAAACGACTT---T-TTACCTT-C-ATTTTC------AACATTAAATTCTGGATT-CAA-TCCCAATTTTTTA--GG---A-A--GTTTTAC-----gtatattttttcagttttggtgtattttatatgtatacatatctttgtcctaagtataatattttgacagaagtctgccatattcagttggttatttttttattcattcctaataaaacatctgttgttatatataagtaagcagacaaaacattggaaattacaaatatggcaagaatatttaattacaggatcagaaaaaaaatgtttgttagatcttcatattcattaatagtataaaataggcattttttcttgtccttttaaaatataatatattgcaatacgtaatcctgacatcaaaatataaaacgtacagtagaaaaaagcatgttaacttttttaatacatcaattgataatgtaaaagtactaatatatttaacttttaccgtctaaaattaaaaacaaatagaaaaataatacccttaccccctttttaattttgccaatttacgaatatttacatgttacaatatgttgtcctgacatcaaattataaaatataccatag
gi|8 : cc-TT----T-C-ATAACC------GACATTCAATTTTCGATTACAT-TCC-AAATCTATACCGT---ATATTCTTTT-CGTG--TTTGCCTGTCCAAAG------------TGCAA-TAC--------ACCGCACGGATAAAAG--------CCCTCTATG-----TTCATGTTGGTA---TTTTTTG----TAAA-C-ATTTCTAACAAGTCGTATTTTGTTACATACA-AGTTCGTAGCCAAAA----CATCG-ACTATTACA--A----------TTA-G--AAAATAATATTACA--AAACAGAAATAT-AAAAACA-TGTATG--ATAGATTTTCATGTTCAATAACATC-ATTA---AATGGTAA-C-------TT-----GTTGTA--GCAAGTAATCCTGGTATAA-ACAT----TAA-AAGTCA--CAAA--------TTAAA---------A---------AAAA---------------------CAC-----------A---------------TTAA-------TAATGCA--------------AAGAT--AC-TAA--CACGACACATTTTCGGCGTCTCCAC-TTT--AA-TT--AGAATAAATA-----ATAA-T-------------------------CT-TC---CT--T--CAC-------------------CA----------TTTT---------CGAACA-TTATATAT------------AACAA-AAGTTATCCTGACATCAAGTAATAAAATGTAC--CCTAGAAATT-GT--TTATTAACTATCTTAGTAAATCATCTGAAAAT------G-TAAAA---------ACAGTAATACATC-AAACTGGTACCATCT-------------AAAAcgtatactttttcagttttggtgtattttataagcatattaatttcctctctgtccaaagtacagtattataactcatctaccatattcatctggttagtttttcattcatttcttacaaaacatctatttcaatatacaaataagtagacaaaacattcgaaattacaaatatgacaagaatatttccttacaggatcagaaaaaaatgtatgttagatcttcatattcattaatattatgaaattggcattttacctctcactttaaaatataatatattgcaataagtaattctgacgtcaaaatattga
gi|4 : cttatAATTTATA--AGTATA-C--CTCTT-------CTC---TGTCCAAAG------------TACTA-TAT--------TCTG-TC---TCAA-G--------TCTGCTATA-----TTCAT-TTGGTCAGGGTTTTTT----T--T-C-GTTTCTTACAAAACATCTATTTTTATATTCT-AGTAAGTAGACAAT-----CAATG-AAGATT-CG--A----------ATATG--GCAATAATATTTTA--TTACAGGATCAG-AAAAAAAATGTTTG--TTAGATCTTCATATCCATAAATATC-ATAA---AACAGGCA-T-------TTT-A--CTTGTC--AT--TTTA---AAATAT-A-ACATATTGAAATTAATAATCCTGGCGTCAATTTCAAA---------A---TGGAACAGAA--------------------GAAT-----------A---------------TGTACTGTTTTTGCTACATTAACTG-------TTGATGCAA-AAA--TACAA-ATATAATAAAA-GTTTACCGTCTTAAA-TT-AAAAACTAATAG-AATATAA-TACCCCAA--CC----C------T--CT-TT---TT-----AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTA-ACAT--------------------GT---CCTGACATCAGACTATAAAATATAC--CATAGAAAAA-GT--ATATCATCTTTCTTAAAACGTCAGTTGACAAT------G-TAAAA---------ATACTAATATATC-AAACTTCTAAAACTTGAAA---------AAAAA--A---------T--A-------GAATATTG-TACCCCT-ACTTCATTT-CGGCT--TTCCGCCAATTT-TGACAATTTC--AAAGGGTTTCAT----CTTACA-ATTA-GCCTGATATCAACC-TGATATCAAA------------TACT---AGGTAGATCTACAGGAGATCAA-TAGATTTATCTTTCTTACTATAT--AC-----ATTATATAGACTTTCTT------AAAAA----AA-AA---CTAATTTTGGGTTTACATCCGCCA----TTGT---G----TGT-C-------TGCCA------------------TTTTACATTTTTTTGTCAATTCACAAACAAATAC---TTTTTCATT-TC-CCAAACACAATTTAA--GTGT---CACTGGAAA-GGGACATACAGCAACATTTAGGCGT-AGTAAGA--C------TG------------GAGT--------CGGGAAAGTCAACG------------A---TTC-T-C-CAGCCACACTCAGT----------TGAACATTCAACATTTTATTCCAGATTACGGTTATCAA---AA---A----CAGGCAAT----CGTCATTTTCCCACAATCTTTA-TCCTTTAACAATATGACCATCGA----------------------C---------------------ATAACAGTAATTAAGTGATTCATGCA-----------------------ACCGTAA--AACATTGTGTTT-G-AAGACGATTTATTCGTG-----AAA-TG--TCACGAA-A----ACCA--CGA---------------------------------T--CGTG--TGTAGAAAATTAAAA-----GTCTAAATCATTTCCGtgtattgaaatgtaaattacaactgcttcatatttcatctgaccttcttgttttcatctcagtaaaacgctctgtctggactacagtcactgctatcaaacagatgtc
gi|12 : attccatccataatactcaatgtttaaaaactaaaaaaaacacttttattttcaacattcaattctggatttaattccaaatttttaggaactgttaaagtatatttttccgtttggggtgtTTTCC-----TCTC--TGTCCAAAG------------TACAG-TAT--------TATA-AC---TCA-----------TCTACCATA-----TTCAT-CTGGTT---AGTTTTT----CATT-C-ATTTCTTACAAAACATCTATTTCAATATACA-AATAAGTAGACAAAA----CATTC-GAAATTACA--A----------ATATG--ACAAGAATATTTCC--TTACAGGATCAG-AAAAAAA-TGTATG--TTAGATCTTCATATTCATTAATATT-ATGA---AATTGGCA-T-------TTTAC--C---TC--TCACTTTA---AAATAT-A-ATATATTGCAATAAGTAATTCTGAC------GTCAAA---------A---T---AT
gi|9 : ccatgtttaaaaactaaaacgactttttaccttcattttcaacattaaattctggattcaatcccaattttttaggaagttttaccgtatactttttcagttttggtgtattttataagcatattaaTAT-----CTT---TGTCCTAAG------------TATAA-TAT--------TTTG-AC---AGAA-G--------TCTGCCATA-----TTCAG-TTGGTT---ATTTTTT----TATT-C-ATTCCTAATAAAACATCTGTTGTTATATATA-AGTAAGCAGACAAAA----CATTG-GAAATTACA--A----------ATATG--GCAAGAATATTTAA--TTACAGGATCAG-AAAAAAAATGTTTG--TTAGATCTTCATATTCATTAATAGT-ATAA---AATAGGCATT-------TTT-T--CTTGTC---C-TTTTA---AAATAT-A-ATATATTGCAATACGTAATCCTGAC------ATCAAA---------A---T---ATAAAA-------C------------GTAC-----------AGTAGAAAAAAGCATGTTAACT-TTTTTAATACATCAATTG-------ATAATGTAA-AAG--TACTA-ATATATTTAAC-TTTTACCGTCTAAAA-TT-AAAAACAAATAGAAAAATAA-TACCCTTA--CC----C------C--C--TT---TT--T--AA-T---------TTT----GCCA---------ATTTA---------CGAATA-TTT-ACAT-------G---TTACAATATGTTGTCCTGACATCAAATTATAAAATATAC--CATAGtga
gi|3 : ccatccataacaaactaagaaaactttttactttcattgttcacattaaattctggattaaatcccaaatttttaggaacttttactgtatattttttcagttttggtgtattttatatgtatacaAT-----TTC---TGTCCAAGG------------AACAA-CAT--------TCTG-AC---TCGC-G--------TCTGTCATA-----TTCAT-CAGGTT---ATTTTTT----TTATTC-ATTTCTTACAAAACATATATTGTTATATATC-AGTAA-TAGACAAAA----CAACG-GAAATTACA--A----------AAATG--GCAAGAATATTTAA--TTACAGGATC
gi|1 : aggtattctatcaataatactcaatgttaaaaaactaaaaagactttttactttcattttccacattaaattctagattcaattccaaattttaggaacttttacccgtatatttcttcaattatagtgtattttataagcaaacccc---TGTGTAAGG------------TACAA-TAT--------TCTG-AC---TCAA-G--------TCTTCCATA-----TTCGT-T---TT---TTTTTTT----TATT-A-ATTTCTTACAAAACATCTTTTCTTATATACT-AGTAAGTAGGCAAAA----CATTG-GAGATTATA--ACAAAATACAAATACG--GCACGAATATTCTA--TTTTATAATCAG-AAAAAAAT---AT-----AGATCGTCATATGCATTAATAT----AA---AATGGGCA-T-------TTT-A--TTTGTC--AC--TTTA----AATAT-G-ACATATTGTAATAC----TCCTGAC------ATCAAA---------A---T---ATAAAAGGTACAGTAGAGAAA-----GCAC-----------A---------------TTAACT-GTTTTAATACATCAACTG-------ATAATGCAA-AAA--TACCA-ATATATCAAAC-TTATACCGTCAAAAA-TT-AAAAACAAATAG-AATATTA-TACCACTA--CA----A------C--C--GT---TT--T--GACTTTTGCCAAATTT----GCCA---------ATTTT---------CGAAAT-TTA-ACAT-------G---TTACAATACGTCGCCCTGACATCAAACTATAAAATATAC--CACAGAAAAA-GT---CATCATCTTTCCTAATACATCAGCTGAAAAT------G-TGACA---------ATATTTATACATCAAAGTTCATCACAT-T-------------GAAACAAT---------T--A-------GAATATTG-TACCCCT-ACCCCATTT-TGGCT--TTTTGTCAGTTT-TG-----------AAGGGTTTCAT----GTTACA-ATTA-G-------TTAGCC-TTTTATCAAT------------TACT---AGG------TATGGCAGACC--------T------TCATACTATATCAGTTA-TA------TAAACTTTCTTCTGAAAAAAAA-AACAACAACATCTAGTGTTTGGTTTACATCCGCCA----ATGT---A----TATAA-------AAACA------------------ATTCAAA------TTCAttactttaaaatataaaaagtacagtagaaaaagcacattaacttttttatacatcaactgataatacaaaaataccaatatattcaactttaaccatctaagattaaaaacaaatataatataatacccctacccccttttaaacttttttttgccaattttcgaaattgacatgttacaataattgtcctgacatcaaattataaaatataccatagaaaaagtatatcatccttttaaaacatcagctgacaatgtaaaaatactaatacatcaatctttcaccgtctaaaacttacaatattgtacccctaccaaatttcggatttttgcaaattttgacaatttaatagggtgttatgtttcaattagttagcctgatatcaaacctgatatcgagtactaggtacagcagaccaagcaaatgatccttcttactttatcttacttctaaaaaaactaatttttggtttacatcagccaatgtgtgcctgccatttttcagtatttagtctattcacaaacacattaccaacaagtcccttttttcttttcctaccaacacaatttaaatatcactagaaaggggcataagcaacatttatgcattgtaagactggaatttggaaaagcaacgtttctccgaccactctgagctgtctaacatgaagtttctacatttcaaaccagattaaggtaatcaaaacaggcaatcgtcattatcccacaatctttattctttaacaatatgaccacaggcatcacagtgatcaattaagtcatgcaaccataaaactaaatggtacgaaaagcacgaatgataatattttataacacgtgtatagaaaattaagtctaaatcctcttggacgcatgcttttttataagaaaagcctcagaaaacaaagcgtccctggtgatcaagactgaaaaatcaggaaaattcccaagttacggacttatccgaagttattcgattttttccaatttgtg
gi|20 : attccattcattatactcagtgttgaaaaactaaaaactctttttactgtcttttaacactttaaattctgaattcaatcctaaatttttaggaacttttatcgtatatttttttcaattttggtttattttacaagtataccccctctgA-G--------TCTTCCATA-----TTCAG-TTGATT---ATCTTTT----TATT-A-ATTTCTctggaaagagacatacagtaatatttacacatagtaagactggaatctagaaagtcaaacactctccgaccatactgacctgtctaacatgattgattttaaacaaaaacaggaaatcgtcattatacaatctgtattcttttaaaatatgaccaccgacgaaacagtgatcaattaattcatgcaaccgttaaacattgtggttttagacgatttattcgtgaaatgtcatgaaaatcacgaatgatacaattttgaaaactggtgtgaagaaaattaaaagtcttaatcattttcaacgcttgatttttttaataaaatactaagaaaagcaagcgtcccagatgatcaaggcttaaaacatagggaattttccaagttacgaacgtgtccgaagttaccctgttttccgatttaatcatagacgaaa
gi|7 : attcatccttaatacataacgtttgaaaactgtaaaaacatcttattttcatttttcaaaataacttctggattcaattccaattttttaggaacttctcccttatatttgttctgttttggtatactttataagtatatctcctctctattcaacgtacaataaaaggacacaGTATTCTCAACAAACAAACAAAATTCTC-TTGAGAAAATATATCA----------ATACAATGCAAAA-TATTTGACTTTACAGA--CA----AAATATTA-ATGCATCAAACTTT--TACTCTCTAAAATTTATAATTGAAAGAGTA-TAATACCCTTT-CGACTTTTCGTAAATTTTT---GAATAT-TTATACGTT---ACAAGTTGTCCTGAC------ATCAAA---------T---A---ATAAAA-------G------------GTCCCGAAAAAGTTTA---------------TAAACG-TCCTTAGTGTATCAGCTG-------ACAATGACACAAA--TATTA-ATATGTTAGAC-T-TTAAC-TCTAAAT-TTTAAAA--AAATG--AATGTGC-CACCGTTAATCC----CATTCGGC--TT-TT---TT--TCCAA-----------TTT----GACA---------ATTTTT--------CGAATG-GTA-ACATAGCGGTAT---C-ACAATATGTTGTCCTGGTATAAAAT-ATAAAAAAAAAGATACAGGAGAA-ATTTATATTAATTTTCTTTGTACATCCGCTGAAAAT------G-C--------------TACTAATATATG-AAAATTTTACCGTCT-------------AAAATGATG--------T--A-------TAATTTAG-GATCATT-ACGTGATCC-C--TT--TCTCGGCTTTTT-TG-CCA------A--------CAC----GTTACA-GTTA-A-------TTATTC-TTAAATCAAA------------TAAA---AGA------TAAAGTAAA
gi|5 : AATACATTGTCCTGAC------ATCAAATAACATACCA---T---AAAAAA-------G------------GTAT-----------A---------------TCATCT-TTCTTATTACATCAGCTG-------TTAATGTAA-AAG--TACTA-ATATATCAAAC-TTTCACCATCTAAAACTT-GAAAA-AAATAG-AATATTG-TTCCCCTA--CCAATTT------CGGCT-TT---TTGCC--AA-T---------TTT----GCCA---------ATTTT---------CGGGT--TT---CAT-------C---TTACAATATGTT--------ATCAAA-TACTAGGTATA----GCAGATCAA-GT--TAATTATCTTTCTTACTATATCAaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|3 : tttatattgtacagttccgctacggatgttacagaaattcgtttctcaaccacatttgtgtagcttagccaaccatatatcccctttttgacttttgacaattttgcctgtttccgaatacttttttaaAC------TTTAAA---------A---T---ATAAAAAGTACAGTAGAAAAA-----GCAC-----------A---------------TTAACT-TTTTTA-TACATCAACTG-------ATAATACAA-AAA--TACCA-ATATATTCAAC-TTTAACCATCTAAGA-TT-AAAAACAAATAT-AATATAA-TACCCCTA--CC----C------C--CT-TT---TA-----AACT---------TTTTTTTGCCA---------ATTTT---------CGAA-A-TTG-ACAT-------G---TTACAATA-ATTGTCCTGACATCAAATTATAAAATATAC--CATAGAAAAA-GT--ATATCATCCTT-TTAAAACATCAGCTGACAAT------G-TAAAA---------ATACTAATACATC-AATCTTTCACCGTCT-------------AAAAC--T---------T--A-------CAATATTG-TACCCCT-ACCAAATTT-CGGAT--TTTTGCAAATTT-TGACAATTTA--ATAGGGTGTTAT----GTTTCA-ATTA-G-------TTAGCC-TGATATCAAACCTGATATCGAGTACT---AGG------TACAGCAGACCAA-GCAAATGATCCTTCTTACT-------TTAT------------CTTACTTCTA---AAAA--------AA---CTAATTTTTGGTTTACATCAGCCA----ATGT---G----TGC-C-------TGCCATTTTTCAGTATTTAGTCTATTCACA------AACACATT-ACCAACAAGTCCCTTTTTTCTTTT-CCTACCAACACAATTTAA--ATAT---CACTAGAAA-GGGGCATA-AGCAACATTTATGCAT-TGTAAGA--C------TGGAATTTGGAAAAG-----------CAA---------CG------------T---TTC-TCC-GA-CCACTCTGAGCTGTC-TAACATGAAGTTTCTACATTTCAAACCAGATTAAGGTAATCAA---AACAGG----CAA----T----CGTCATTATCCCACAATCTTTA-TTCTTTAACAATATGACCACAGG----------------------C---------------------AT-----------------------C-----------------------ACAGTGATCAA---------T-T-AAGTC-ATGCAACCATAAAACTAAA-TG--GTACGAA-A----AGCA--CGAAT---GATAAT-A-TTTT------A----TAACA--CGTG--TATAGAAAATT--AA-----GTCTAAATCCTCTTGGACGCATGCTTTTTT----ATAAGAAAAG-C--CTCAGAA-AA----CAAA-GCGTCCCTGGTGATCAAGAC-TGAAAAA--TCAGGAAAATTCCCA-AGTTACGGACTTATCCGAAGTTATTC-GAT---T----TT-T-T-CCAATTTattttctagacattcatcttaaaacaaaaaaaaatacttttgggtttacatccgccattttatgttcgacatttgtcagtattttgtcaattcacatataaataaccacgattccctttattatttcctcaacactatttaaatgtcacttgaaagggccatacagcaacatatacatgtagtaagactggaatctggaaagtcaacgaatcttcgaccacactgagctgtctaacatgaacgttctacattttaacccagattaaggttatcaaatacaggcaatcgccattatcccacactctttatttttttaaaaataaaaccaccgacataatagtgatcagtaaattcaagcaaccgtaaaatattgtgttttaagacgatttattcgtgaaatgtcacgataatcacaaatgaaaatattttggtaactcgtgcgtagaaaattaaaagtctaaatcatcttcggcgcaggctttttccgaagaaaatcctaggaatagcaagcatcccacatgatcaagactaaaacattagggtaattcccaagttacggacttatccgaagttacccgattttctttgatgtcgttatggatcgaata
gi|6 : aggtattctatcaataatactcaatgttaaaaaactaaaaagactttttactttcattttccacattaaattctagattcaattccaaattttaggaacttttacccgtatatttcttcaattatagtgtattttataagcaaaccccatttctgtccaaggaacaacattctgactcgcgtctgtcatattcatcaggttattttttttattcatttcttacaaaacatatattgttatatatcagtaatagacaaaacaacggaaattacaaaaatggcaagaatatttaattacaggatcttA---------A---T---AGAAAA-------A------------GCAC-----------A---------------TTAACT-TTTT-AATACATCCACTG-------ATAATACAA-AAT--TACCA-ATATATTAAAC-ATTTACCGTCTAAAA-TT-AAAAACAAATAG-AATGTAA-TACCCCTA--CC----C------C--CT-TT---TT-----AACT---------TTT----GCCAGTTTTGCCAATTTT---------TGAATA-TTG-ACAT-------G---TTACAATACGTTGTTCTGACATCAAATTATAAAATATAC--CATAGAAAAA-GT--ATAT-----------------CAGCTGACAAT------G-TAAAA---------ATACTAATACATC-AAACTTTCACCATCTTAAACTTAAAAA-AAAAT--T---------T--A-------GAATATTG-TTCCCCT-ACCCCATTT-TGACT--TTTTGCCAATTT-TGACAATTTC--AAAGGGTTTCAT----GTTACA-ATTA-G-------TTAGCC-TGATATCAAG------------TACT---AGG------TACAGCAGATCAA-GCAAATTATCCTTCTTACTATATCAGTTA-CA------TAGACTTCTT-------AAAAA--ACAACAA---CTAATTTTGG-------TGTGTC------TGT---A----T-T-T-------TGTCA------------------ATTCAAA------TACAAATT-A--A-CGAGTCCC--TTTTCCATTCCCCCCAAACACAATTTAA--ATAT---CACTGGAGA-GGGGTATACAGCAACATTTACACCT-AGTAAGA--CAGGAATTG------------GGAAAGT-----CAA---------TG------------A---TTC-TCC-GA-CCATACTGAGCTGTCTTAACATGAAAGTTCTACATTTTAACCCAGATTATGGTTATCAA---AA---ACAGGCAG----T----TGTGATTATCCCACAATCTTTA-TTCTTTAACAATATGACAACGGA----------------------C---------------------ATAACTGATCAATTAAGTTATGA--A-----------------------ACCGTAA--AACATTGTGTTT-T-AATAATATTTATGCGCG-----AAA-TG--TCATGAA-A----ATCA--CTAAT---GATAATAT-TTTT------G----TAACA--GGTA--TGTAGAAAAATAAAA-----GTCTAAATCAACTTGGA-GTTTGCTTTTTA----ATAAGAAAAA-T--CTAAAAA-AAAC--C-AA-GCGTCTCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCAA-AGTTGCAGACTTATCTGAAGTTACTT-GATTTTT----TT-T-T-CCGAATTTGTTAgtg
gi|7 : A-AAA--TATTA-ATGCATCAAAC-TTTTACTCTCTAAAA-TT-TATAATTGAAAG-AGTATAA-TACC-------------------------CT---TT--C--GACT---------TTTC---GTAA---------ATTTT---------TGAATA-TTT-ATAC-------G---TTACAA---GTTGTCCTGACATCAAATAATAAAAGGTCC--C---GAAAAA-GT--TTATAAACGTCCTTAGTGTATCAGCTGACAAT------GACACAA---------ATATTAATATGTT--AGACTTTAAC-TCT-------------AAATT--T---------T--AAAAAAATGAATGTGC-CACCGTTAATCCCATTC-GGCTT--TTTTTCCA-ATT-TGACAATTTTTCGAATGGTAACATAGCGGTATCACAATATG-------TTGTCC-TGGTATAAAA------------TAgg
gi|5 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacTA--TC----C------C--CT-TT---TT-----GACT---------TTT----GACA---------ATTTTGCCTGTTTCCGAATACTT-----T-------T---TTAAAATACATTGTCCTGACATCAAAT-----AACATAC--CATAAAAAAG-GT--ATATCATCTTTCTTATTACATCAGCTGTTAAT------G-TAAAA---------GTACTAATATATC-AAACTTTCACCATCT-------------AAAAC--TTGAAAAAAAT--A-------GAATATTG-TTCCCCT-A-CCAATTT-CGGCT--TTTTGCCAATTT-TGCCAATTTT----CGGGTTTCAT----CTTACA-A-TA----------------TGTTATCAAA------------TACT---AGG------TATAGCAGATCAA-GTTAATTATCTTTCTTACTATATCAATT-T------TCTAGACATTCATCTT---AAAAC-AAAAAAAA---ATACTTTTGGGTTTACATCCGCCATTTTATGTTCGACATTTGT-CAGTATTTTGTCA------------------ATTCACA------TATAAATA-ACCA-CGATTCCCTTTATT--ATT-TCCTC-AACACTATTTAA--ATGT---CACTTGAAA-GGGCCATACAGCAACATATACATGT-AGTAAGA--C------TG------------GAAT--------CTGGAAAGTCAACG------------A---ATCTT-C-GA-CCACACTGAGCTGTC-TAACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCAA---AT---A----CAGGCAAT----CGCCATTATCCCACACTCTTTATTTTTTTAAAAATAAAACCACCGA----------------------C---------------------ATAATAGTGATCAGTAAATTCAAGCA-----------------------ACCGTAA--AATATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAT-A----ATCA--CAAAT---GAAAATAT-TTTG------G----TAACT--CGTG--CGTAGAAAATTAAAA-----GTCTAAATCATCTTCGGCGCAGGCTTTTTC----CGAAGAAAAT-C--CTAGGAATAG----C-AA-GCATCCCACATGATCAAGAC-TAAAACA--TTAGGGTAATTCCCA-AGTTACGGACTTATCCGAAGTTACCC-GA----T----TT-TCT-TTGATGTCGTTATGGAtaaaaaaaaagatacaggagaaatttatattaattttctttgtacatccgctgaaaatgctactaatatatgaaaattttaccgtctaaaatgatgtataatttaggatcattacgtgatccctttctcggcttttttgccaacacgttacagttaattattcttaaatcaaataaaagataaagtaaaaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|9 : tttatattgtacagttccgctacggatgttacagaaattcgtttctcaaccacatttgtgtagcttagccaaccataT-TT---TT--T----CT---------TGT-----CC-----------TTTT---------AAAATA-T-A-ATAT-------A---TTGCAATACGTAATCCTGACATCAAAATATAAAACGTAC--AGTAGAAAAAAGC--ATGTTAACTTTTTTAATACATCAATTGATAAT------G-TAAAA---------GTACTAATATATT-TAACTTTTACCGTCT-------------AAAAT--TAAAAACAAAT--A-------GAAAAATAATACCCTT-ACCCCCTTT----TTAATTTTGCCAATTTACGAATATTT-----A------CAT----GTTACA-A-TATG-------TTGTCC-TGACATCAAA------------Ttcgaata
gi|10 : ccatccataacaaactaagaaaactttttactttcattgttcacattaaattctggattaaatcccaaatttttaggaacttttactgtatattttttcagttttggtgtattttatatgtatacatatctttgtcctaagtataatattttgacagaagtctgccatattcagttggttatttttttattcattcctaataaaacatctgttgttatatataagtaagcagacaaaacattggaaattacaaatatggcaagaatatttaattacaggatcagaaaaaaaatgtttgttagatcttcatattcattaatagtataaaataggca---TT--T--AACA---------T------GTCA---------CTTT-----------GAATT-ACA-ACAT-------A---TTGCAATAAGTAATCCTGACATCAAAATATAAAAGGTAC--AGTTGACAAA-GC--ACACTAACGTT-TTAATACATTAACTGTTAAT------G-CAAAATACAAAAATGTACCAATATAGT-AAACATTTACCGTCT-------------AAAA---T---------T--A-------AAAtataaaatataccatag
gi|23 : gtattcaatccataatactcaatgtttaaaactaaaaaaggttttatttcattttccacattaaattctggattcaatcccaaagttgtaggaaatttcaccggatattgtttaatgttttatgtatttttcaagtatactccctctctgtccaaagtacaatattcttacttaaatcttccatattgatttagttatttgttttaaccatttcttacaaaacatctagtgttatatactagtaggtagacaaaacatcggagattacaaatatggcaataatatttcataacaggttcagaaaaaaaaatgtatgttagatcttcattttcattaatattataaaatgggcaTA-ACGT-------TTATCTGCAATAAG-------GACAT-AAATTATAAAGCATAC--CATAGTAAAA-GT--ATATTACGTTTCTTAATGCATCAGCTGACAAT------G-TAAAC---------ATATTAAAACGTC-AAACTTTCACCTTCG-------------AAAAT--T---------TGAA-------GAAacaaacacaatataattacccctaccacctattaagtttaaacatatttattttataattt
gi|28 : aTAC--CATAGAAAAA-TT--GTGTTGAATTACTCAGTGCATCAGCTGACAAA------G-CAAAA---------ATACTGATTCACC-A----TTTAAAATTTGG-----------AAAAA--T---------T--A-------AAATGTAG-TACCCCA-ACCCaa
gi|15 : gACATCAACAAACAGTCCAATTA-TGAAA---------TTATT--TATATT-AAGCTTTTACCAACTGACATTCATAAAAAAAAT--T---------A--A-------GAATATAG-TACCCCT-ACCCAATTTACGGTT--CATTGCC------------------AAA-------AT--------CA-AGTC---------TT--TC-TGATATCAAG------------AACTGAAAGG------TACAAAAGATCAA-GCAATTTAATC-TCTTACTTTTTCAATTATT-------TACACTTTCTACTG---AAAAAGCACACCAA---CTAAGTTTGGGTTTACATCCGCCA----ATGT---A----TGT-T-------TGATA------------------ATT
gi|9 : TTCT-TGTCC-TTTT--AAAATATAATAT----ATTGCA-A-TA-C-------GTAATCCTGACATCAAAATA---------TAAA---ACG------TACAGTAGAAAAAAGCATGTTAACTTTTTTAATACATCAATTGATAATgtcaattatggctgtctattata
gi|13 : ccatccataacaaactaagaaaactttttactttcattgttcacattaaattctggattaaatcccaaatttttaggaacttttactgtatattttttcagttttggtgtattttatatgtatacatatctttgtcctaagtataatattttgacagaagtctgccatattcagttggttatttttttattcattcctaataaaacatctgttgttatatataagtaagcagacaaaacattggaaattacaaatatggcaagaatatttaattacaggatcagaaaaaaaatgtttgttagatcttcatattcattaatagtataaaataggcattttTTTC-TCGTCACTTT--AAAATGTAACAT----GTTGCA-TTAA-G-------TTAATC-TGACATAAAA-------------A-----AGG------TAGAGAAGAgtaaaagtactaatatatttaacttttaccgtctaaaattaaaaacaaatagaaaaataatacccttaccccctttttaattttgccaatttacgaatatttacatgttacaatatgttgtcctgacatcaaattataaaatataccatag
gi|10 : tattccatgtataatactcactatttataaactgaaataaactttcattctccagatttaactctacatttaactacaaattttaggaacgtttaccgtattttatctgtccaaagtacaacaaactgaaagaagccttctatattcagatggttatttgttatccattaattaaaaatcatctattgttataccagtaactaatcaaaacattggagattacagatatgacaataatacatcattacaggatcagaaaatgtttggtaaaccttcttattcaataacatcatcaagtgattCAT----ATTGCA-A-TA-A-------GTAATCCTGACATCAAAATA---------TAAA---AGG------TACAGTTGACAAA-GCACACTA-ACGTTTTAATACATTAACTGTTAATaaattcactttaa
gi|29 : gtattcaatccataatactcaatgtttaaaactaaaaaaggttttatttcattttccacattaaattctggattcaatcccaaagttgtaggaaatttcaccggatattgtttaatgttttatgtatttttcaagtatactccctctctgtccaaagtacaatattcttacttaaatcttccatattgatttagttatttgttttaaccatttcttacaaaacatctagtgttatatactagtaggtagacaaaacatcggagattacaaatatggcaataatatttcataacaggttcagaaaaaaaaatgtatgttagatcttcattttcattaatattataaaatgggcatttaacatgtcactttgaattacaa-------TTGGCC-TGATATCAAA------------TACT---TCG------TACAGCAGATCAA-GCAAATAATCCTTCTTACTATATC-------AATTATCTAGACTTTCTTCTG---AAAAA--ACAACAA---Cgcaaaatacaaaaatgtaccaatatagtaaacatttaccgtctaaaattaaaaacaaacacaatataattacccctaccacctattaagtttaaacatatttattttataattt
gi|22 : tggtttcatCA------------------ATTCACA------TACAAATA-ACCACTGAGTCCC--TTTTACATT-TC-CCGAACGCTATTAAG--ATATGTCCAC-GGAAA-AGACCAAACGTCAACATTTACATGTCGGTAAAA--C------GG------------G-----------T-----------C------------------CC-T-A-GA-TCaaaa
gi|11 : tttttttcttaattgtcagagttttctACA------TAGAAATA-ACCAT-GAA--CATCTTGTTCTTT-TCCCCGAACACTCTTTAATTATGT---CAAT-GAAACGGGCCAAACGGCAATATTTTCACGT-AGTAAGA--C---------------------------------------------G------------A---GT-------------ATCAGCCTGTC-CAAAATGAACGTTCTACATGCTTACCCGTGTGTAGGTTATTAA---CA--------CAT----TTAATCGTCCACCTTACACAATCCTTC-TCCTTTAAAAACATGACCACCGA----------------------C---------------------AT-----------------------AACAGTTATTAGTAAACACACACTACCTTAA--AACATTGTTTTTCT-AAGACGATTTATTCGTG-----AAACTG--TCATGAC-A----ATCA--CAAcgcctatac
gi|1 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaAAAAACAATTCAA--AT-T---CACTGGAAA-GAGACATACAGTAATATTTACACAT-AGTAAGA--C------TG------------GAATCTAGAAAGT-----------CA------------AACACTC-T-CCGA-CCATACTGACCTGTC-TAACATGATTG------ATTTTAA-----ACAAA----AACAG---GA---A-----AT---------CGTCATTAT---ACAATCTGTA-TTCTTTTAAAATATGACCACCGA----------------------CGAAACAGTGATCAATTAATTCATGC---------------------A-----------------------ACCGTTA--AACATTGTGGTT-T-TAGACGATTTATTCGTG-----AAA-TG--TCATGAA-A----ATCA--CGAAT---GAT-ACAATTTTG------A----AAACT--GGTG--TGAAGAAAATTAAAA-----GTCTTAATCATTTTCAACGCTTG-ATTTTT----TTAATAAAAT-A--CTAAGAA-AAG---C-AA-GCGTCCCAGATGATCAAGGCTTAAAACA--T-AGGGAATTTTCCA-AGTTACGAACGTGTCCGAAGTTACCCTG----------TT-T-T-CCGATTTAATCATAGAtaacagccatattttggttttcacgggagataactcttgccgaaaattgggagaagtctttatcatttcagatattcaagacttagcggaattcacaagttacggatttaaccgaggttacccgatttttaccgatatcgttctacatagaatagctttaa
gi|24 : attccattcattatactcagtgttgaaaaactaaaaactctttttactgtcttttaacactttaaattctgaattcaatcctaaatttttaggaacttttatcgtatatttttttcaattttggtttattttacaagtataccccctctgtgtgtaaggtacaatattctgactcaagtcttccatattcgttttttttttttattaatttcttacaaaacatcttttcttatatactagtaagtaggcaaaacattggagattataacaaaatacaaatacggcacgaatattctattttataatcagaaaaaaatatagatcgtcatatgcattaatataaaatgggcattttatttgtcactttaaatatgacatattgtaatactcctgacatcaaaatataaaaggtacagtagagaaagcacattaactgttttaatacatcaactgataatgcaaaaataccaatatatcaaacttataccgtcaaaaattaaaaacaaatagaatattataccactacaaccgttttgacttttgccaaatttgccaattttcgaaatttaacatgttacaatacgtcgccctgacatcaaactataaaatataccacagaaaaagtcatcatctttcctaatacatcagctgaaaatgtgacaatatttatacatcaaagttcatcacattgaaacaattagaatattgtacccctaccccattttggctttttgtcagttttgaagggtttcatgttacaattagttagccttttatcaattactaggtatggcagaccttcatactatatcagttatataaactttcttctgaaaaaaaaaacaacaacatctagtgtttggtttacatccgccaatgtatatAAA-AGGACATGTAGCAACATTTACACGT-AGTAAGA--C------TG------------GAA---------C-----------CGGGAAAGTCAACAA---TTC-TTC-AA-CCACACTGAGTTGTC-CAACATGAACATTCTACATTTTAACTCAGAcgaaa
gi|21 : ACATGT-AGTAAGAGTT------TG------------G-----------A-----------AA------------A---GTA-----AA-TCA--TCAGTCTGTC-CAAAATGAACGTTCTACATTTTAACCAATGTTTTGGTTAATAAAATGG---G----CAC----T----TGTCAACCTTACACAATACCTC-TCCTTTAACAACATTGCCACCAA----------------------C---------------------AT-----------------------A-----------------------Actttattctataaaaat
gi|14 : aatacaattcaagataactctaaataccaG------------A---TTA-T-CCGA-CCACACTGAACTGTC-TAACATGAACGTTTTACATTTTAACCAAGATTAAGGTTATCAA---AA---A----CAGGCAAT----CGTCATTACCCCACAATCTTT---TCTTTAAAAATATGCCTACCGAAATAAACAGTGGTAATTTAATTC---------------------ATGC---------------------A-----------------------ACTGTGA--AATATTGCGTTT-T-AAGTCGATTTATTCGTG-----AAA-TA--TCACGGA-A----ATCA--CGTTT---GATAATAT-TTTG------G----TAACT--CATG--TTTAGAAAATTTAAA-----GTCTAAATCA------GTGCTTGCCTTTTT----CCAAGAAAAA-C--CT--------------AA-GCGTCATAGATGATCAAGAC-TAAAAAA--Taagttattattaaacacacacaacaaac
gi|16 : ctaggaattgaaaagtcaagATAAACAC--A----------------------C---------------------AC-----------------------G-----------------------ACCTTAA--AGCATTGTGTTT-TGAAGAGGATTTCTTTGTG-----AAACTGAATCACGAA-A----GGCAATCATATTTGGGTCATCA-C--G------GGAGATAATT--TGTG--TCTA-AAAATT--AATCTTAGTTTTAATCAT-TTCAAC-ACT---TTTT--------------------TATCAC-AG----T-TA-GCTTCGAAGATAATCAATAC-T---------TAGGGGAAATCCCA-AGTAACAGACTTATCTGAAATTACCC-TG----T----TT-T-TGCTGATTTCATTATaga
gi|17 : aaaagtgatcaA----------------------C---------------------GT-----------------------G-----------------------ACCTTAA--AACACTGTGTTT-A-AAGACGATTTATTCGTG-----AAACTG--TTACGAA-GCTATATTT--CG------GTCA-TCA-CGGGCGGGAGG----TAACT--CGT----GTCGAAAAA---AA-----ATGTAG----TCTT----AAT--CATTTTC---------------------TCAA-AG----C-AA-GCGTCGCAGATAATCAATAT-T---------CAAGGGAAGTACCA-AGTTACGGACGCATCCGAAGTCACCA-GA----TA---TA-T-A-CCGGTTTCGTTATGGAacatggaatacc
gi|26 : aaacgcACGGATA----ACTT--CGGATAA-GTCAGTAA-CTTG------G----GAATTACCGTAATTGT------TT--A------GTCTTGATCATCTTGGACGCTTGC-TTTTC----TTAAGtggaatac
gi|1 : taagaaaaggAC---GTTCGTAA-CTTG------G----AAAATTCCCTA--TGTT-----TT--AA-----GCCTTGATCATCTGGGACGCTTGC-TTTTC----TTAGT---AT-T--TTATTAA-AAAAATC-AA-GCGTTGAAAATGATTAAGAC-Ttttatgtctatttcaatatg
gi|30 : attccattcattatactcagtgttgaaaaactaaaaactctttttactgtcttttaacactttaaattctgaattcaatcctaaatttttaggaacttttatcgtatatttttttcaattttggtttattttacaagtataccccctctgtgtgtaaggtacaatattctgactcaagtcttccatattcgttttttttttttattaatttcttacaaaacatcttttcttatatactagtaagtaggcaaaacattggagattataacaaaatacaaatacggcacgaatattctattttataatcagaaaaaaatatagatcgtcatatgcattaatataaaatgggcattttatttgtcactttaaatatgacatattgtaatactcctgacatcaaaatataaaaggtacagtagagaaagcacattaactgttttaatacatcaactgataatgcaaaaataccaatatatcaaacttataccgtcaaaaattaaaaacaaatagaatattataccactacaaccgttttgacttttgccaaatttgccaattttcgaaatttaacatgttacaatacgtcgccctgacatcaaactataaaatataccacagaaaaagtcatcatctttcctaatacatcagctgaaaatgtgacaatatttatacatcaaagttcatcacattgaaacaattagaatattgtacccctaccccattttggctttttgtcagttttgaagggtttcatgttacaattagttagccttttatcaattactaggtatggcagaccttcatactatatcagttatataaactttcttctgaaaaaaaaaacaacaacatctagtgtttggtttacatccgccaatgtatataaaaacaattcaaattcactggaaagagacatacagtaatatttacacatagtaagactggaatctagaaagtcaaacactctccgaccatactgacctgtctaacatgattgattttaaacaaaaacaggaaatcgtcattatacaatctgtattcttttaaaatatgaccaccgacgaaacagtgatcaattaattcatgcaaccgttaaacattgtggttttagacgatttattcgtgaaatgtcatgaaaatcacgaatgatacaattttgaaaactggtgtgaagaaaattaaaA-----GTCTAGATCTTCTGCAGCGCTTG-ATTTTCAAGACTTAGAAAAA-AAATTAGAAA-AA----C-AA-GCGTCCCTAATGATCgtccgaagttaccctgttttccgatttaatcatagacgaaa
gi|26 : TAAGAAAAGGC--TTAAGAA-AAG---C-AA-GCGTCCAAGATGATCAAGAC-TAAACAA--TTACGGTAATTCCCA-AGTTACTGACTTATCCGAAGTTATCC-GT----T----TTAT-G-TCTATTTCAATATGta
gi|25 : --CTAAGAA-AAG---C-GA-GCGTTCCAGATGATCAAGTC-TAAAAAAAAT-AGGGGAGTTTCCA-AGTCACGGACTTATCCGAAGTTGCCC-GA----TTTTTTT-T-T-CTGATTTCGTTATGGA
gi|27 : gataagtGAA-AA----C-AAAGCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGTAATTCCCATGTTT-CGAACTTATCCGAAGTTACTC-GA----T----TT-TCC-CCGATTTCGTTATGGAcagaat
gi|11 : acaaCATTTCAGATATTCAAGAC-T---------TAGCGGAATTCACA-AGTTACGGATTTAACCGAGGTTACCC-GA----T----TT-T-TACCGATATCGTTcgg
3 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|18 ): ATTTGTATTTACCTTTAAAGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAAAAAGATTTTATTTTCATTTCTCAATCCGGCATTCAATCACAACATTTTTTTATCATAACTTCACCAAATGTTTTTATCAGTTTTGTTATATTCATAAGTATAACTTCTCCCCGTCTAAAGTACAATTTACTGACAAATAGCTCATTTCGTACACATAATCTATTGTTAAGTCT
Unaligned ( gi|19 ): ATTTGTATTTACCTTTAAAGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAAAAAGATTTTATTTTCATTTCTCAATCCGGCATTCAATCACAACATTTTTTTATCATAACTTCACCAAATGTTTTTATCAGTTTTGTTATATTCATAAGTATAACTTCTCCCCGTCTAAAGTACAATTTACTGACAAATAGCTCATTTCGTACACATAATCTATTGTTAAGTCT
Unaligned ( gi|31 ): TATTGAACAGATCTGCCACGAACGTTGAGGACTGACATCGTTTCTCACCACATTTGTGTAATCTGGCCAACCGTAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 111 666666666666666666666666666666666666666666666 1111111111 11 1111111 2222222 777777777777777777777777777777777777777777777777777777777777777777 111111111 111111111111111 1111111111111111 1111 111111111 111111111 111111 4444444444444 22222222222222222 1 111111111111 111111 111111111 222222222222 111111 7777777777 11111 1111 1111 22222222222222222222 333333333333333333 1111111 1 2222222222222222222222222222222222222222222222 111 111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11111 1 3333333333333 444444444444444444444444444 1111 11 111111 111111111 11 1111 111
lowQualScore : 00 3 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 3 3 55 222 4 55 111111111111111111111111111111111111111111111 4 777 1 4 0 4 777 4 555 2 1 1 0 9999999999 4 0 55 00 66 4 4 1 77 777 4 4444444 777 8888888 3 1 3 1 5 1 999999 555 444444444444444444444444444444444444444444444444444444444444444444 3 1 4 4 444444444 0 3 55 3 0 222222222222222 66 555 6666666666666666 6666 444444444 888888888 1 3 9 000000 2 6 7 1 555 55 2 22 3 888888 3 44 4 3333333333333 3 00000000000000000 44 3 55 666 7777 999999 4 4 2 0 0 999999999999 6 111111 4 222222222 2 000000000000 777 222222 0 0 5 0 0 2222222222 0 0 00000 4444 2 888 0 2222 33333333333333333333 1 666666666666666666 6666666 1 888 5 5 99 8 1 5 4 77 1 1 66 2 888 1 4 55 0 3333333333333333333333333333333333333333333333 4 222 4 4 4 2 1 4 4 333 66 66 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 55 4 4 00000 2 55 0000000000000 4 777 333333333333333333333333333 0000 666 7777 1 55 0 00 888888 000000000 3 44 3 555 3 3 4 1 6666 3 9999 3 3 111
lowQualScore : .. . ............................................................................................................................................. . . .. ... . .. ............................................. . ... . . . . ... . ... . . . . .......... . . .. .. .. . . . .. ... . ....... ... ....... . . . . . . ...... ... .................................................................. . . . . ......... . . .. . . ............... .. ... ................ .... ......... ......... . . . ...... . . . . ... .. . .. . ...... . .. . ............. . ................. .. . .. ... .... ...... . . . . . ............ . ...... . ......... . ............ ... ...... . . . . . .......... . . ..... .... . ... . .... .................... . .................. ....... . ... . . .. . . . . .. . . .. . ... . . .. . .............................................. . ... . . . . . . . ... .. .. . ............................................................................................................................ .. . . ..... . .. ............. . ... ........................... .... ... .... . .. . .. ...... ......... . .. . ... . . . . .... . .... . . ...
lowQualScore : 00 6 555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555555 3 3 55 555 0 55 888888888888888888888888888888888888888888888 0 000 0 0 8 0 000 0 444 4 1 0 7 4444444444 9 7 55 66 11 4 4 9 11 888 4 4444444 111 8888888 6 2 6 3 8 4 666666 888 555555555555555555555555555555555555555555555555555555555555555555 6 3 0 0 555555555 2 6 00 6 4 777777777777777 55 888 8888888888888888 4444 555555555 222222222 4 6 5 555555 1 5 6 8 444 22 2 44 6 888888 1 22 9 5555555555555 1 66666666666666666 22 6 00 444 7777 666666 0 0 0 8 7 000000000000 3 555555 0 444444444 8 555555555555 888 888888 5 2 0 2 4 8888888888 4 4 99999 0000 5 888 7 1111 44444444444444444444 0 999999999999999999 2222222 0 666 7 7 77 9 7 7 3 99 1 0 99 2 888 0 0 55 9 7777777777777777777777777777777777777777777777 0 555 0 0 0 1 9 4 4 999 44 22 0 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 55 0 0 00000 0 55 5555555555555 1 000 888888888888888888888888888 4444 444 7777 8 77 1 88 888888 000000000 3 66 3 888 3 3 5 0 5555 6 1111 6 6 555
consensus : GTATTCCATCCATAATACTCAATGTTTAAAAAC--TAAAA-AA--------A-C-T---TTT----TA----T-TTT---------CA-TT-----TTCCANATT-------AAATTCT--GGA-------------------TTC------AA--------TCCCA-------------A---AT-TTT-TA--GG---A-A--CTTT----T-------AC-----T-----TT------------------TGTCCAAAGTACAATATTCTG-AC---TCAA-GTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------AA---TATAA--------------AAAG------------------CAC-----------A---------------TTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAATTTC--GAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-T----TAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATT-TCC--CCGAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGA------------AT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTC-CAACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAAT---GATA---ATAN-TTTGG-------------TAACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
Reference ( family-341 ) : GTATTCCATCCATAATACTCAATGTTTAAAAAC--TAAAA-AA--------A-C-T---TTT----TA----T-TT----------CA-TT-----TTCCACATT-------AAATTCT--GGA-------------------TTC------AA--------TCCCA-------------A---AT-TTT-TA--GG---A-A--CTTT----T-------AC-----T-----TT------------------TGTCCAAAGTACAATATTCTG-AC---TNAA-GTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ANTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAANAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------AA---TATAA--------------AANG------------------CAC-----------A---------------TTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATATTANCTTTCTTAATACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TTACCGTCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAATTTT--AAAGGGTNTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTAATT---TAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATT-TCC--CCGAACACNATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGA------------AC------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTC-TAACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAANAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAAT---GATA---ATAA-CTTGG-------------TAACTCGTGTGTAGAAAATT---AAA---A----GTCTAAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTANGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
gi|1 : ATTCCATTCATTATACTCAGTGTTGAAAAAC--TAAA--AACTCTTTTTA-C-TGTCTTT----TAACACT-TT----------AAATTCTGAATTCAATCCT-------AAATTTTTAGGAAC-----------------TTT------TA--------TCGTA-------------T---AT-TTT-TT--TC---A-A--TTTTGGTTT-------AT-----T-----TTACAAGTATACCCCCTCTGTGTGTAAGGTACAATATTCTG-AC---TCAA-GTCTTCCATATTCGT-TT--TT----TTT-TTT-T-ATTAATTTCTTACAAAACATCTTTTCTTATATACTAGTAAGTAGGCAAAACATTGGAGATTATAACAAAATACAAATACGGCACGAATATTCTA--TTTTATAATCAG--AAAAA--AA-T-ATA-----GATCGTCATATGCATTAATAT----AA---AATGGGCA-T-------TTTA--TTTGTC--AC--TTTAAA-TATG-ACA-TATTGTAATAC----TCCTGACATCAA------AA---TATAA--------------AAGGTACAGTAGAGAAAG----CAC-----------A---------------TTAACT-GTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATCAAACTTATACCGTCAAAAATTAAAAACAAATAG-AAT--ATTA-TACCACTA--C----AA------CC--GT---TTT--GACTTTTGCCAAATTT----GCCA---------ATTTT---------CGAAAT-TTAACATG------TTACAATACGTCGCCCTGACATCAAACTATAAAATATACCACA---GAAAAAGT--CATCATCTTTCCTAATACATCAGCTGAAAAT------G-TGACAATATTTATACATCAAAGTTCATCA-CATTG-------------AAACAA--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-TGGC-TTTTTGTCAGTTTTG-----------AAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTTTTATCAAT------------TACT---AGG------TATGGCAGA--------------CCTTCATACTATATCAGTTA-TA------TAAACTTTCTTCTGAAAAAAAA-A--ACAACAACATCTAGTGTTTGGTTTACATCCGCCA----ATGT---A----TATAA-------AAACA------------------ATTCAAAT-------TCA
gi|1 : AAAACAATTCAA--AT-T---CACTGGAAAGAGACATACAGTAATATTTACACAT-AGTAAGA--CTGGA------------AT------------CTAGAAAGTCAAAC------ACTC-T-CCGA-CCA-TACTGACCTGTC-TAACATGATTG------ATTTTAA--------------A-CA-AAAACAGGAAATCGTC-A---TTAT---ACAATCTGTA-TTCTTTTAAAATATGACCACCGA----------------------CGAAACAGTGATCAATTAATTCATGCA-----------------------A-----------------------CCGTT-----------------------A--AACATTGTGGTT-T-TAGACGATTTATTCGTG-----AAA-TG--TCATGAAA-------------ATCACGAAT---GAT----ACAATTTTGA-------------AAACTGGTGTGAAGAAAATT---AAA---A----GTCTTAATCATTTTCAACGCTTG-ATTTTT----TTAATAAAAT-A--CTAAGAA-AAG-C-A---A-GCGTCCCAGATGATCAAGGCTTAAAACA--T-AGGGAATTTTCCAAGTTACGAACGTGTCCGAAGTTACCCTG-------TT-T-T-CCGATTTAATCATAGActggaaagagacatacagtaatatttacacatagtaagactggaatctagaaagtcaaacactctccgaccatactgacctgtctaacatgattgattttaaacaaaaacaggaaatcgtcattatacaatctgtattcttttaaaatatgaccaccgacgaaacagtgatcaattaattcatgcaaccgttaaacattgtggttttagacgatttattcgtgaaatgtcatgaaaatcacgaatgatacaattttgaaaactggtgtgaagaaaattaaaagtcttaatcattttcaacgcttgatttttttaataaaatactaagaaaagcaagcgtcccagatgatcaaggcttaaaacatagggaattttccaagttacgaacgtgtccgaagttaccctgttttccgatttaatcatagacgaaa
gi|10 : attccattcattatactcagtgttgaaaaactaaaaactctttttactgtcttttaacactttaaattctgaattcaatcctaaatttttaggaacttttatcgtatatttttttcaattttggtttattttacaagtataccccctctgtgtgtaaggtacaatattctgactcaagtcttccatattcgttttttttttttattaatttcttacaaaacatcttttcttatatactagtaagtaggcaaaacattggagattataacaaaatacaaatacggcacgaatattctattttataatcagaaaaaaatatagatcgtcatatgcattaatataaaatgggcattttatttgtcactttaaatatgacatattgtaatactcctgacatcaaaatataaaaggtacagtagagaaagcacattaactgttttaatacatcaactgataatgcaaaaataccaatatatcaaacttataccgtcaaaaattaaaaacaaatagaatattataccactacaaccgttttgacttttgccaaatttgccaattttcgaaatttaacatgttacaatacgtcgccctgacatcaaactataaaatataccacagaaaaagtcatcatctttcctaatacatcagctgaaaatgtgacaatatttatacatcaaagttcatcacattgaaacaattagaatattgtacccctaccccattttggctttttgtcagttttgaagggtttcatgttacaattagttagccttttatcaattactaggtatggcagaccttcatactatatcagttatataaactttcttctgaaaaaaaaaacaacaacatctagtgtttggtttacatccgccaatgtatataGTATTCAATCCATAATACTCAATGTTTAAAA-C--TAAAA-AA--------G-G-T---TTTATTTCA----T-TTTCCA------CA-TTAAA--TTCTGGATT-------CAATCCC--AAA-------------------GTTGTAGGAAA--------TTTCACCGGATATTGTTTA---ATGTTT-TA--TG---T-A--TTTT----TCAAGTATAC-----TCCCTCTC------------------TGTCCAAAGTACAATATTCTT-AC---TTAA-ATCTTCCATATTGAT-TTAGTTA---TTTGTTT-T-AACCATTTCTTACAAAACATCTAGTGTTATATACTAGTAGGTAGACAAAACATCGGAGATTA----------CAAATATGGCAATAATATTTCA--TAACAGGTTCAGAAAAAAA--AA-T-GTATGTTAGATCTTCATTTTCATTAATATT-ATAA---AATGGGCA-T-------TTAA--CATGT----CACTTTGAATTACA-ACA-TATTGCAATAAGTAATCCTGACATCAA------AA---TATAAAAGGTACAGTTGACAAAG------------------CAC-----------A---------------CTAAC--GTTTTAATACATTA-ACTGTTAATG-CAAAATACAAAAATGTACCAATATAGTAAACATTTACCGTCTAAAATTAAAAACAAACAC-AAT--ATAATTACCCCTA--C----CA------CCTATTAAGTTT--AAcgaaa
gi|11 : ACAT-------AGAAATAAC-C-A-T-GAACATCTTGTT--CTTT-TCC--CCGAACACTCTTTAATTATGT---CAATGAAACGGGCCAAACGGCAATATTTTCACGT-AGTAAGA--C-------------------------------------G------------AGTA-T-C-AG-CC----------TGTC-CAAAATGAACGTTCTACATGCTTACCCGTGTGTAGGTTATTA-ACA-CATTTAATCGTCCACC-TTA---CACAATCCTTC-TCCTTTAAAAACATGACCACCGA----------------------C---------------------AT--A-----------------------ACAGTTATTAGTAAACACACACTACCTTA-----------------------A--AACATTGTTTTTCT-AAGACGATTTATTCGTG-----AAACTG--TCATGACA-------------ATCAC-AAT---AACAGCCATAT-TTTGGTTTTCACGGGAGATAACTC-T-TGCCGAAAATTGGGAGA---A----GTCTTTATCATTTacatatttattttataattt
gi|11 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaCATTTCAGATATTCAAGAC-T---------TAGCGGAATTCACAAGTTACGGATTTAACCGAGGTTACCC-GA----T-TT-T-TACCGATATCGTTcagatattcaagacttagcggaattcacaagttacggatttaaccgaggttacccgatttttaccgatatcgttctacatagaatagctttaa
gi|12 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaacatagaaataaccatgaacatcttgttcttttccccgaacactctttaattatgtcaatgaaacgggccaaacggcaatattttcacgtagtaagacgagtatcagcctgtccaaaatgaacgttctacatgcttacccgtgtgtaggttattaacacatttaatcgtccaccttacacaatccttctcctttaaaaacatgaccaccgacataacagttattagtaaacacacactaccttaaaacattgtttttctaagacgatttattcgtgaaactgtcatgacaatcacaataacagccatattttggttttcacgggagataactcttgccgaaaattgggagaagtctttatATGTTTAAAAAC--TAAAA-CG--------A-C-T---TTT----TA----CCTT----------CA-TT-----TTCAACATT-------AAATTCT--GGA-------------------TTC------AA--------TCCCA-------------A---TT-TTT-TA--GG---A-A--GTTT----T-------AC-----ctacatagaatagctttaa
gi|12 : ccTT----T-------CC-----T-----CTC-----------------TGTCCAAAGTACAGTATTATA-AC---TCA---TCTACCATATTCAT-CTGGTTA---GTT-TTT-C-ATTCATTTCTTACAAAACATCTATTTCAATATACAAATAAGTAGACAAAACATTCGAAATTA----------CAAATATGACAAGAATATTTCC--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATT-ATGA---AATTGGCA-T-------TTTA--CCTCT----CACTTTAAAATATA-ATA-TATTGCAATAAGTAATTCTGACGTCAA------AA---TATcgtatactttttcagttttggtgtattttataagcatattaatttcctctctgtccaaagtacagtattataactcatctaccatattcatctggttagtttttcattcatttcttacaaaacatctatttcaatatacaaataagtagacaaaacattcgaaattacaaatatgacaagaatatttccttacaggatcagaaaaaaatgtatgttagatcttcatattcattaatattatgaaattggcattttacctctcactttaaaatataatatattgcaataagtaattctgacgtcaaaatattga
gi|13 : ccatgtttaaaaactaaaacgactttttaccttcattttcaacattaaattctggattcaatcccaattttttaggaagttttaccgtatactttttcagttttggtgtattttataagcatattaaTATTCCATGTATAATACTCACTATTTATAAAC--TGAAATAA--------A-C-T---TT-------------------------CA-TT-----CTCCAGATT-------TAACTCT--ACA-------------------TTT------AA--------CTACA-------------A---AT-TTT--A--GG---A-A--CGTT----T-------ACCGTATT-----TTATC---------------TGTCCAAAGTACAACAAACTG-AA---AGAA-GCCTTCTATATTCAG-ATGGTTA---TTT-GTT---ATCCATTAATTAAAAATCATCTATTGTTATA--CCAGTAACTAATCAAAACATTGGAGATTA----------CAGATATGACAATAATACATCA--TTACAGGATCAG-----AA--AA-T-GTTTGGTAAACCTTCTTATTCAATAACATC-ATCA---AGTG---A-T-------TTTT--CTCGT----CACTTTAAAATGTA-ACA-TGTTGCATTAAGTTAATCTGACATAAA------AAAGGTAGAG--------------AA-G------------------AAA-----------A---------------TTCACT-TTtga
gi|14 : ------G------------ATTA-T-CCGA-CCA-CACTGAACTGTC-TAACATGAACGTTTTACATTTTAACCAAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTACCCCACAATCTTT---TCTTTAAAAATATGCCTACCGAAATAAACAGTGGTAATTTAATTC---------------------ATGCA-----------------------A-----------------------CTGTG-----------------------A--AATATTGCGTTT-T-AAGTCGATTTATTCGTG-----AAA-TA--TCACGGAA-------------ATCACGTTT---GATA---ATAT-TTTGG-------------TAACTCATGTTTAGAAAATT---TAA---A----GTCTAAATCA------GTGCTTGCCTTTTT----CCAAGAAAAA-C--CT------------A---A-GCGTCATAGATGATCAAGAC-TAAAAAA--Taa
gi|15 : ctaggaattgaaaagtcaagACATCAACAAACAGTCCAATTA-TGAAATTATT--TATATTAAGCTT--TTACCAACTGACATTCATAAAAAAA-AT--T---------A---A--GAAT-A--TA---GTACCCCT----AC-----C--------------------CAATTT--AC------------GGT-TCA------TTGCCAAAATCAAG-------TCTTTCTGATATCAAG------------AACTGAAAGG------TACAAAAGATCAAGCAATTTAATC--TCTTACTTTTTCAATTATT-------TACACTTTCTACTG----AAAA-AGCACACCAA---CTAAGTTTGGGTTTACATCCGCCA----ATGT---A----TGT-T-------TGATA------------------ATTaga
gi|16 : ATAAACAC--A----------------------C---------------------AC--G-----------------------A-----------------------CCTTA-----------------------A--AGCATTGTGTTT-TGAAGAGGATTTCTTTGTG-----AAACTGAATCACGAAAGGCA---------ATCAT--ATTTGGGTC---ATCA-C--GGGAGA---------TAATTTGTGTCTA-AAAATT---AATCTTA----GTTTTAATCAT-TTCAACACTT---TTTT-------------AT-C-----------A--C-AGTTA-GCTTCGAAGATAATCAATAC-T---------TAGGGGAAATCCCAAGTAACAGACTTATCTGAAATTACCC-TG----T-TT-T-TGCTGATTTCATTATgtcaattatggctgtctattata
gi|17 : aaaagtgatcaA----------------------C---------------------GT--G-----------------------A-----------------------CCTTA-----------------------A--AACACTGTGTTT-A-AAGACGATTTATTCGTG-----AAACTG--TTACGAAGCTATATTTCGGTCATCACGGGC---GGGA-----------GG-------------TAACTCGTGTC--GAAAA-----AAA---ATGTAGTCTTAATCA---------------TTTTC-------------T-C-------AA-AG--C-A---A-GCGTCGCAGATAATCAATAT-T---------CAAGGGAAGTACCAAGTTACGGACGCATCCGAAGTCACCA-GA----TATA-T-A-CCGGTTTCGTTATGGAacatggaatacc
gi|18 : aaacgcGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAAA-AA--------G-A-T---TTT----AT----T-TT----------CA-TT-----TCTC-------------AATCCG--GCA-------------------TTC------AA--------TCACA-------------AC--AT-TTT-Ttggaatac
gi|19 : atttgtatttacctttaaaGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAAA-AA--------G-A-T---TTT----AT----T-TT----------CA-TT-----TCTC-------------AATCCG--GCA-------------------TTC------AA--------TCACA-------------AC--AT-TTT-Tttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|2 : atttgtatttacctttaaaGTATTCCATCCATAACACTCAATGTTTAAAA-C--TAAAA-AA--------A-A-A---T-------A----T-TT----------CA-TT-----GTCCACATT-------AAATTCT--GGA-------------------TTC------AA--------TCCGA-------------A---AT-TTT-TA--GG---A-A--CTTT----T-------AC-----T-----TT------------------TGTCCAAAGTTCAATATTCTG-AC---TAGA-GTCTTCCGTATTCAT-TCGGTTG---TTT-CTT-T-AATCATTTCTTATAAAACATCTATTTTTGTATACTAGTAAGTAGACAAAACATTGGAAATTA----------TAAATATGGCAAGACTATTTCA--TTACAGGATCAG--AAAAA--AA-TTGTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTC--CTTGTC--ACACTTTATAATATA-ACA-TGTTGTAATAAGTTATTCAGACTTCAA------AA---TATAA--------------AATG------------------CAC-----------A---------------TTAACT-TTTTTAATACATCA-ACTGAAGATG-GAAAA---------ATACCAATATATCCAACTCTTATCGTCTAAAATTAAGAGCAAATAT-AAT--ACAA-TACCTCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATT------CTACAATACGTTGACCCGACATCGAATTATAAAAAATACCACA---GAAAAAGT-ATATTATTTTTCTTATTACATCAGCTGACAAT------G-TAAAGATACTAATATATCGAGTTT--TTACCATCT-------------AAA-AC--T---------T---A--GAAT-A--TT---GTACCCTT----AC-----CCCATT-T-CGAT-TTTTTGCCATTTTTGACCATTTT--AAAGGGTTTCA------T-GTTGCAAGTA-G-------TTAGTCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TGCGTCTTACTATATCAATTATTAATTATCTAGACTTCCTTCTG----AAAA-AT-ACAACAA---CTAGTTTTGGGTTTACTTACGCCA----ATGT---A----TGT-C-------TGGCA------------------ATTCACAT-------GCAAATTAC-C-ACC-GAGTCCCTTTTTTTCATT-TCT--CCAAACACAATTTAA--ATGT---CACTTGAAAGGGACATACAGCAACATATACATGT-AGTAAAA--CTGG--------------C------------C------G------------ATTC-T-C-GA-TCA-CATCGAGCTGTC-CAACATGAACGTTCTATATTTTAACCCAGATAAAGGTTATCA-AGAACAT----TCGTC-A---TTATTCCATAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------AGTACGAAT---GTTA---ATAA-CTTGG-------------TAACTCGTATGTAGAAAATT-----A---A----GTGTGAATCATCTTCGACGATTGCATTTTC----CTAAGAAAAC-C--CTATGAA-AA--C-A---A-GCATCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCTAATTTACGGGCTTACCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGAttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|20 : TTCATCCTTAATACATAACGTTTGAAAAC--TGTAA-AA--------A-C-A---TCT----TA----T-TTT---------CA-TT-----TTTCAAAAT-------AACTTCT--GGA-------------------TTC------AA--------TTCCA-------------A---TT-TTT-TA--GG---A-A--CTTC----T-------CC-----C-----TT------------------a
gi|20 : a------------------TATTCAACGTACAATAAAAGG-AC---ACAA-GTCTTCCATATTCAG-TTGATTA---TCT-TTT-T-ATTAATTTCTatatttgttctgttttggtatactttataagtatatctcctctctattcaacgtacaataaaaggacacaagtcttccatattcagttgattatctttttattaatttct
gi|21 : attcatccttaatacataacgtttgaaaactgtaaaaacatcttattttcatttttcaaaataacttctggattcaattccaattttttaggaacttctcccttatatttgttctgttttggtatactttataagtatatctcctctcACATGT-AGTAAGAGTTTGGA------------AA------------A------G-----------------T-A-AA-TCATCAGT---CTGTC-CAAAATGAACGTTCTACATTTTAACCAATGTTTTGGTTA--ATAAAATGGGCACTTGTC-AACCTTA---CACAATACCTC-TCCTTTAACAACATTGCCACCAA----------------------C---------------------AT--A-----------------------A-----------------------
gi|22 : aatacaattcaagataactctaaataccaCA------------------ATTCACAT-------ACAAATAAC-C-A-CTGAGTCCC--TTTTACATT-T-C--CCGAACGCTATTAAG--ATATGTCCAC-GGAAAAGACCAAACGTCAACATTTACATGTCGGTAAAA--CGGGaagttattattaaacacacacaacaaac
gi|23 : tttttttcttaattgtcagagttttctGACAT-AAATTATAAAGCATACCATA---GTAAAAGT-ATATTACGTTTCTTAATGCATCAGCTGACAAT------G-TAAACATATTAAAACGTCAAACTT--TCACCTTCG-------------AAA-AT--T---------TGA-A--GAAtccctagatccgcctatac
gi|24 : ataacgtttatctgcaataagAAAAGGACATGTAGCAACATTTACACGT-AGTAAGA--CTGGA------------AC------------C------GGGAAAGTCAACAATTC-TTC-AA-CCA-CACTGAGTTGTC-CAACATGAACATTCTACATTTTAACTCAGACTaa
gi|25 : GATAAG-T--CTAAGAA-AAG-C-G---A-GCGTTCCAGATGATCAAGTC-TAAAAAAAAT-AGGGGAGTTTCCAAGTCACGGACTTATCCGAAGTTGCCC-GATTTTT-TT-T-T-CTGATTTCGTTATGGAttattctataaaaat
gi|26 : TAAGAAAAGGC--TTAAGAA-AAG-C-A---A-GCGTCCAAGATGATCAAGAC-TAAACAA--TTACGGTAATTCCCAAGTTACTGACTTATCCGAAGTTATCC-GT----T-TTAT-G-TCTATTTCAATATGcagaat
gi|27 : AAGAA-AA--C-A---AAGCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGTAATTCCCATGTTTCGAACTTATCCGAAGTTACTC-GA----T-TT-TCC-CCGATTTCGTTATGGA
gi|28 : acTACCATA---GAAAAATT-GTGTTGAATTACTCAGTGCATCAGCTGACAAA------G-CAAAAATACTGATTCACCA----T--TTAAAATTTGG-----------AAA-AA--T---------T---A--AAAT-G--TA---GTACCCCA----AC-----CCcgg
gi|29 : g-------TTGGCCTGATATCAAA------------TACT---TCG------TACAGCAGATCAAGCAAATAA-TCCTTCTTACTATATCAATT----ATC---TAGACTTTCTTCTG----AAAA-A--ACAACAA---CAAA
gi|3 : tggtttcatGTATTCTATCAATAATACTCAATGTTAAAAAAC--TAAAA-AG--------A-C-T---TTT----TA----C-TTTCATTTTCCACA-TTAAA--TTCTAGATTCAATTCCAAATTTTA-GGAACTTTTACCCGTATATTTCTTC------AA--------TTATA-------------GTGTAT-TTTATA--AGCA-A-A--CCCC------------AT-----T-----TC------------------TGTCCAAGGAACAACATTCTG-AC---TCGC-GTCTGTCATATTCAT-CAGGTTA---TTT-TTT-TTATTCATTTCTTACAAAACATATATTGTTATATATCAGTAA-TAGACAAAACAACGGAAATTA----------CAAAAATGGCAAGAATATTTAA--TTACAGGATCa
gi|3 : agACTTTAAAATATA-A----------A-AAGT-------ACA-----------G---TAGAA--------------AAAG------------------CAC-----------A---------------TTAACT-TTTTTA-TACATCA-ACTGATAATA-CAAAA---------ATACCAATATATTCAACTTTAACCATCTAAGATTAAAAACAAATAT-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TA---AACT---------TTTTTTTGCCA---------ATTTT---------CGAA-A-TTGACATG------TTACAATA-ATTGTCCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATATCATCCTT-TTAAAACATCAGCTGACAAT------G-TAAAAATACTAATACATCAATCTT--TCACCGTCT-------------AAA-AC--T---------T---A--CAAT-A--TT---GTACCCCT----AC-----CAAATT-T-CGGA-TTTTTGCAAATTTTGACAATTTA--ATAGGGTGTTA------T-GTTTCAATTA-G-------TTAGCCTGATATCAAACCTGATATCGAGTACT---AGG------TACAGCAGACCAAGCAAATGA-TCCTTCTTACT-------TTAT------------CTTACTTCTA----AAAA---------AA---CTAATTTTTGGTTTACATCAGCCA----ATGT---G----TGC-C-------TGCCATTTTTCAGTATTTAGTCTATTCACAA-------ACACATTAC-CAA-C-AAGTCCCTTTTTTCT-TT-TCCTACC-AACACAATTTAA--ATAT---CACTAGAAAGGGGCATA-AGCAACATTTATGCAT-TGTAAGA--CTGGA------------ATTTGGAAAAGCAAC------G------------TTTC-TCC-GA-CCA-CTCTGAGCTGTC-TAACATGAAGTTTCTACATTTCAAACCAGATTAAGGTAATC--AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACCACAGG----------------------C---------------------AT--C-----------------------A-----------------------CAGTG-----------------------ATCAA---------T-T-AAGTC-ATGCAACCATAAAACTAAA-TG--GTACGAAA-------------AGCACGAAT---GATA---AT-A-TTTTA-------------TAACACGTGTATAGAAAATT-----A---A----GTCTAAATCCTCTTGGACGCATGCTTTTTT----ATAAGAAAAG-C--CTCAGAA-AA--CAA---A-GCGTCCCTGGTGATCAAGAC-TGAAAAA--TCAGGAAAATTCCCAAGTTACGGACTTATCCGAAGTTATTC-GAT---T-TT-T-T-CCAATTTttactttaaaatataaaaagtacagtagaaaaagcacattaacttttttatacatcaactgataatacaaaaataccaatatattcaactttaaccatctaagattaaaaacaaatataatataatacccctacccccttttaaacttttttttgccaattttcgaaattgacatgttacaataattgtcctgacatcaaattataaaatataccatagaaaaagtatatcatccttttaaaacatcagctgacaatgtaaaaatactaatacatcaatctttcaccgtctaaaacttacaatattgtacccctaccaaatttcggatttttgcaaattttgacaatttaatagggtgttatgtttcaattagttagcctgatatcaaacctgatatcgagtactaggtacagcagaccaagcaaatgatccttcttactttatcttacttctaaaaaaactaatttttggtttacatcagccaatgtgtgcctgccatttttcagtatttagtctattcacaaacacattaccaacaagtcccttttttcttttcctaccaacacaatttaaatatcactagaaaggggcataagcaacatttatgcattgtaagactggaatttggaaaagcaacgtttctccgaccactctgagctgtctaacatgaagtttctacatttcaaaccagattaaggtaatcaaaacaggcaatcgtcattatcccacaatctttattctttaacaatatgaccacaggcatcacagtgatcaattaagtcatgcaaccataaaactaaatggtacgaaaagcacgaatgataatattttataacacgtgtatagaaaattaagtctaaatcctcttggacgcatgcttttttataagaaaagcctcagaaaacaaagcgtccctggtgatcaagactgaaaaatcaggaaaattcccaagttacggacttatccgaagttattcgattttttccaatttgtg
gi|30 : aggtattctatcaataatactcaatgttaaaaaactaaaaagactttttactttcattttccacattaaattctagattcaattccaaattttaggaacttttacccgtatatttcttcaattatagtgtattttataagcaaaccccatttctgtccaaggaacaacattctgactcgcgtctgtcatattcatcaggttattttttttattcatttcttacaaaacatatattgttatatatcagtaatagacaaaacaacggaaattacaaaaatggcaagaatatttaattacaggatctt---A----GTCTAGATCTTCTGCAGCGCTTG-ATTTTCAAGACTTAGAAAAA-AAATTAGAAA-AA--C-A---A-GCGTCCCTAATGATCgtg
gi|4 : ATTCCATCCATAATACTCAATGTTTAAAAAC--TAAAA-AA--------AACAC---TTT----TA----T-TTTCAA------CA-TTCAA--TTCTGGATTTAATTCCAAATTTTTAGGAACTG---------------TTA------AAGTATATTTTTCCGTTTGGGGTGT---A---AT-TTA-TA--AGTATA-C--CTCT----T--------------C-----TC------------------TGTCCAAAGTACTATATTCTG-TC---TCAA-GTCTGCTATATTCAT-TTGGTCAGGGTTT-TTT-T---TCGTTTCTTACAAAACATCTATTTTTATATTCTAGTAAGTAGACAAT-CAATGAAGATT-----------CGAATATGGCAATAATATTTTA--TTACAGGATCAG--AAAAA--AAAT-GTTTGTTAGATCTTCATATCCATAAATATC-ATAA---AACAGGCA-T-------TTTA--CTTGTC--AT--TTTAAAATATA-ACA-TATTGAAATTAATAATCCTGGCGTCAATTTCAAAA---TGGAACA------------GAAG------------------AAT-----------A---------------TGTACTGTTTTTGCTACATTA-ACTGTTGATG-CAAAA---------ATACAAATATAATAAAAGTTTACCGTCTTAAATTAAAAACTAATAG-AAT--ATAA-TACCCCAA--C----CC------TCT-TT---TT---AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------T-------------CCTGACATCAGACTATAAAATATACCATA---GAAAAAGT-ATATCATCTTTCTTAAAACGTCAGTTGACAAT------G-TAAAAATACTAATATATCAAACTT--CTAAAACTTGAAA---------AAA-AA--A---------T---A--GAAT-A--TT---GTACCCCT----AC-----TTCATT-T-CGGC-TTTCCGCCAATTTTGACAATTTC--AAAGGGTTTCA------T-CTTACAATTA-GCCTGATATCAACCTGATATCAAA------------TACT---AGGTAGATCTACAGGAGATCAATAGATTTA-TCTTTCTTACTATATACATTA-TA------TAGACTTTCT--TA----AAAA-A--A----AA---CTAATTTTGGGTTTACATCCGCCA----TTGT---G----TGT-C-------TGCCA------------------TTTTACATTTTTTTGTCAATTCACAA-A-C-AAATAC---TTTTTCATT-T-C--CCAAACACAATTTAA--GTGT---CACTGGAAAGGGACATACAGCAACATTTAGGCGT-AGTAAGA--CTGGAGTCGGGAAAGTCAA------------C------G------------ATTC-T-C-CAGCCA-CACTCAGT----------TGAACATTCAACATTTTATTCCAGATTACGGTTATCA-AAAACAGGCAATCGTC-A---TTTTCCCACAATCTTTA-TCCTTTAACAATATGACCATCGA----------------------C---------------------AT--A-----------------------A-----------------------CAGTAATTAAGTGATTCATGCAACCGTAA--AACATTGTGTTT-G-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ACCACGA---------------------------------------TCGTGTGTAGAAAATT---AAA---A----GTCTAAATCATTTCCGta
gi|5 : TA--T----CC------CCT-TT---TT---GACT---------TTT----GACA---------ATTTTGCCTGTTTCCGAATACTT----TT------TTAAAATACATTGTCCTGACATCAAAT-----AACATACCATA---AAAAAGGT-ATATCATCTTTCTTATTACATCAGCTGTTAAT------G-TAAAAGTACTAATATATCAAACTT--TCACCATCT-------------AAA-AC--TTGAAAAAAAT---A--GAAT-A--TT---GTTCCCCT----A------CCAATT-T-CGGC-TTTTTGCCAATTTTGCCAATTTT----CGGGTTTCA------T-CTTACAA-TA---------------TGTTATCAAA------------TACT---AGG------TATAGCAGATCAAGTTAATTA-TCTTTCTTACTATATCAATT-T---TC---TAGACATTCATCTT----AAAACA--AAAAAAA---ATACTTTTGGGTTTACATCCGCCATTTTATGTTCGACATTTGT-CAGTATTTTGTCA------------------ATTCACAT-------ATAAATAAC-C-A-C-GATTCCCTTTATT--ATT-TCC--TC-AACACTATTTAA--ATGT---CACTTGAAAGGGCCATACAGCAACATATACATGT-AGTAAGA--CTGGA------------ATCTGGAAAGTCAAC------G------------AATCTT-C-GA-CCA-CACTGAGCTGTC-TAACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AATACAGGCAATCGCC-A---TTATCCCACACTCTTTATTTTTTTAAAAATAAAACCACCGA----------------------C---------------------AT--AATAGTGATCAGTAAATTCAAGCAA-----------------------CCGTA-----------------------A--AATATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGATA-------------ATCACAAAT---GAAA---ATAT-TTTGG-------------TAACTCGTGCGTAGAAAATT---AAA---A----GTCTAAATCATCTTCGGCGCAGGCTTTTTC----CGAAGAAAAT-C--CTAGGAATAG--C-A---A-GCATCCCACATGATCAAGAC-TAAAACA--TTAGGGTAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-TCT-TTGATGTCGTTATGGA
gi|6 : tttatattgtacagttccgctacggatgttacagaaattcgtttctcaaccacatttgtgtagcttagccaaccata------AA---TAGAA--------------AAAG------------------CAC-----------A---------------TTAACT-TTTT-AATACATCC-ACTGATAATA-CAAAA---------TTACCAATATATTAAACATTTACCGTCTAAAATTAAAAACAAATAG-AAT--GTAA-TACCCCTA--C----CC------CCT-TT---TT---AACT---------TTT----GCCAGTTTTGCCAATTTT---------TGAATA-TTGACATG------TTACAATACGTTGTTCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATAT-----------------CAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCTTAAACTTAAAAA-AAA-AT--T---------T---A--GAAT-A--TT---GTTCCCCT----AC-----CCCATT-T-TGAC-TTTTTGCCAATTTTGACAATTTC--AAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAG------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAGTTA-CA------TAGAC-TTCTT-------AAAA-A--ACAACAA---CTAATTTTGG---TGTGTC----------TGT---A----T-T-T-------TGTCA------------------ATTCAAAT-------ACAAATTA----A-C-GAGTCCC--TTTTCCATTCCCC--CCAAACACAATTTAA--ATAT---CACTGGAGAGGGGTATACAGCAACATTTACACCT-AGTAAGA--CAGGA------------ATTGGGAAAGTCAAT------G------------ATTC-TCC-GA-CCA-TACTGAGCTGTCTTAACATGAAAGTTCTACATTTTAACCCAGATTATGGTTATCA-AAAACAGGCAGTTGTG-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACAACGGA----------------------C---------------------AT--AACTGATCAATTAAGTTATGAA--A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AATAATATTTATGCGCG-----AAA-TG--TCATGAAA-------------ATCACTAAT---GATA---ATAT-TTTTG-------------TAACAGGTATGTAGAAAAAT---AAA---A----GTCTAAATCAACTTGGA-GTTTGCTTTTTA----ATAAGAAAAA-T--CTAAAAA-AAACC-A---A-GCGTCTCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCAAAGTTGCAGACTTATCTGAAGTTACTT-GATTTTT-TT-T-T-CCGAATTTGTTAtcgaata
gi|7 : GCAA-AATATTTGACTTTACAGA--CA---AAATATTAA-T-GCAT--CAAACTTT--TACTCTCTAAAATTTATAATTGAAAGAGTA-TAATACCCTTTCGACTTTTCGTAAATTTTTGAATATTTATA-CGTTACAA---GTTGTCCTGACATCAA------AT---AATAA--------------AAGG------------------TCCCGAAAAAGTTTA---------------TAAACG-TCCTTAGTGTATCA-GCTGACAATGACACAA---------ATATTAATATGTTAGACTTTAAC--TCTAAATTTTAAAA-AAAT-G-AAT--GTGC-CACCGTTAATC----CCATTCGGCTT-TT---TTTCCAA-----------TTT----GACA---------ATTTTT--------CGAATG-GTAACATAGCGGTATCACAATATGTTGTCCTGGTATAAAAT-ATAAAAAAAAAGATACAGGAGAAATTTATATTAATTTTCTTTGTACATCCGCTGAAAAT------G-C-----TACTAATATATGAAAATT--TTACCGTCT-------------AAA-ATGATG--------T---A--TAAT-T--TA---GGATCATT----ACGTGATCCCTTTCT-CGGCTTTTTTGCCAA------------------------CA------C-GTTACAGTTA-A-------TTATTCTTAAATCAAA------------TAAA---AGA------TAAAGTAAAgg
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatAAA---------ATATTAATGCATCAAACTTTTACTCTCTAAAATTTATAATTGAAAG-AGT--ATAA-TACCC-----------------------T---TTC--GACT---------TTTC---GTAA---------ATTTT---------TGAATA-TTTATACG------TTACAA---GTTGTCCTGACATCAAATAATAAAAGGTCCC------GAAAAAGT-TTATAAACGTCCTTAGTGTATCAGCTGACAAT------GACACAAATATTAATATGTTAGACTT--TAAC--TCT-------------AAA-TT--T---------TAAAA--AAATGA--AT---GTGCCACCGTTAAT-----CCCA-T-T-CGGCTTTTTTTCCAA-TTTGACAATTTTTCGAATGGTAACATAGCGGT-ATCACAATAT-G-------TTGTCCTGGTATAAAA------------TAaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacAACATA-GCGGTATCACAATATGTTGTCCTGGTAT-AA------AA---TATAA--------------AAAAAAAGATACAGGAGAAATTTAT-----------A---------------TTAATT-TTCTTTGTACATCC-GCTGAAAATG-C--------------TACTAATATATGAAAATTTTACCGTCTAAAATGATG------TAT-AAT--TTAG-GATCATTA--CGTGATC------CCT-TT---CTC--GGCT---------TTTTT--GCCA---------A------------------------CACG------TTACAGTTAATTATTCTTAAATCAAAT---AAAAGATAAAGTA---AAAATGGT-GTATTCATTTTCTTTGTGGAACAGCTGAAAAT------T-CTAAAATATTAAAACGTTATACTT--TTACCATTT-------------AAA-ATG-T---------T---AACAAAT-AGGGTAAAGTACCTCT----A------CCCATT-TGTGGCTTTTTTGCAAAT--------TTTC--GAATGGTAGCG------T-GTTACAATAA-G-------TTACCCTtaaaaaaaaagatacaggagaaatttatattaattttctttgtacatccgctgaaaatgctactaatatatgaaaattttaccgtctaaaatgatgtataatttaggatcattacgtgatccctttctcggcttttttgccaacacgttacagttaattattcttaaatcaaataaaagataaagtaaaaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|8 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacaaaatattaatgcatcaaacttttactctctaaaatttataattgaaagagtataataccctttcgacttttcgtaaatttttgaatatttatacgttacaagttgtcctgacatcaaataataaaaggtcccgaaaaagtttataaacgtccttagtgtatcagctgacaatgacacaaatattaatatgttagactttaactctaaattttaaaaaaatgaatgtgccaccgttaatcccattcggctttttttccaatttgacaatttttcgaatggtT----TA----T-TTT---------CA-TA-----ACCGACATT-------CAATTTT--CGA-------------------TTA------CA--------TTCCA-------------A---AT-CTA-TACCGT---ATATTCTTT----T--------CGTG--T-----TTGCC---------------TGTCCAAAGTGCAATACACCGCACGGATAAAAGCCCTCTATGTTCATGTTGGT-A---TTT-TTTGT-AAACATTTCTAACAAGTCGTATTTTGTTACATACAAGTTCGTAGCCAAAACATCGACTATTA----------CAATTA-GAAAATAATATTACA--AAACAGAAATAT--AAAAA--CA-T-GTATGATAGATTTTCATGTTCAATAACATC-ATTA---AATGG-------------TAA--CTTG--------------------------TTGTAGCAAGTAATCCTGGTATAAA------CA---T-TAA--------------AAGT------------------CAC-----------A-----------------AA-----TTAAAAAAAACACATTAATAATG-CAAAG---------ATACTAACACGACACATTTTCGGCGTCTCCACTT-----TAATTAG-AATAAATAA-TAATCTT--------------------------------CC---------TTC----ACC----------ATTTT---------CGAACA-TT-ATATA------TAACAA-AAGTTATCCTGACATCAAGTAATAAAATGTACCCTA---GAAATTGT-TTATTAACTATCTTAGTAAATCATCTGAAAAT------G-TAAAAACAGTAATACATCAAACTG--GTACCATCT-------------AAA-AT--G---------T---A--tgcat
gi|9 : cCCATCCATAACA-------------AAC--TAAGA-AA--------A-C-T---TTT----TAC---T-TT----------CA-TT-----GTTCACATT-------AAATTCT--GGA-------------------TTA------AA--------TCCCA-------------A---AT-TTT-TA--GG---A-A--CTTT----T-------AC-----T-----ttgaaatgtaaattacaactgcttcatatttcatctgaccttcttgttttcatctcagtaaaacgctctgtctggactacagtcactgctatcaaacagatgtc
gi|9 : ----T-------AT-----C-----TT------------------TGTCCTAAGTATAATATTTTG-AC---AGAA-GTCTGCCATATTCAG-TTGGTTA---TTT-TTT-T-ATTCATTCCTAATAAAACATCTGTTGTTATATATAAGTAAGCAGACAAAACATTGGAAATTA----------CAAATATGGCAAGAATATTTAA--TTACAGGATCAGA-AAAAA--AA-T-GTTTGTTAGATCTTCATATTCATTAATAGT-ATAA---AATAGGCATT-------TTTT--CTTGTC---C-TTTTAAAATATA-ATA-TATTGCAATACGTAATCCTGACATCAA------AA---TATAA--------------AACG------------------TAC-----------AGTAGAAAAAAGCATGTTAACT-TTTTTAATACATCA-ATTGATAATG-TAAAA---------GTACTAATATATTTAACTTTTACCGTCTAAAATTAAAAACAAATAGAAAA--ATAA-TACCCTTA--C----CC------CC--TT---TTT--AA-T---------TTT----GCCA---------ATTTA---------CGAATA-TTTACATG------TTACAATATGTTGTCCTGACATCAAATTATAAAATATACCATA---Ggtatattttttcagttttggtgtattttatatgtatacatatctttgtcctaagtataatattttgacagaagtctgccatattcagttggttatttttttattcattcctaataaaacatctgttgttatatataagtaagcagacaaaacattggaaattacaaatatggcaagaatatttaattacaggatcagaaaaaaaatgtttgttagatcttcatattcattaatagtataaaataggcattttttcttgtccttttaaaatataatatattgcaatacgtaatcctgacatcaaaatataaaacgtacagtagaaaaaagcatgttaacttttttaatacatcaattgataatgtaaaagtactaatatatttaacttttaccgtctaaaattaaaaacaaatagaaaaataatacccttaccccctttttaattttgccaatttacgaatatttacatgttacaatatgttgtcctgacatcaaattataaaatataccatag
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|31 ): TATTGAACAGATCTGCCACGAACGTTGAGGACTGACATCGTTTCTCACCACATTTGTGTAATCTGGCCAACCGTAT
Alignments
lowQualScore : 11111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 111111 1111111111 11 1111111 2222222 77777777777777777777777777777777777777777777777777777777777777777777777777777 111111111 111111111111111 1111111111111111 1111 111111111 111111111 111111 4444444444444 22222222222222222 1 22222222222222 111111 111111111 222222222222 111111 5555555555 11111 1111 1111 22222222222222222222 333333333333333333 1111111 11 11 11111111111111111111111111111111 111 111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11111 1 2222222222222 444444444444444444444444444 1111 11 111111 11 1111 111
lowQualScore : 7 3 0000 7777 8888888 44 555 555 6666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 4 111111 0 4 777 4 555 1 1 1 0 9999999999 5 0 55 00 66 4 4 1 77 777 4 4444444 777 8888888 3 1 3 1 5 3 999999 44 555 22222222222222222222222222222222222222222222222222222222222222222222222222222 3 1 4 4 444444444 0 3 55 3 0 222222222222222 66 555 6666666666666666 6666 444444444 888888888 1 3 9 000000 2 6 7 1 555 55 2 22 1 888888 3 44 0 3333333333333 3 00000000000000000 44 3 55 666 7777 999999 4 4 2 0 00000000000000 44 111111 4 222222222 2 000000000000 777 222222 0 0 5 0 0 1111111111 2 0 00000 4444 2 888 0 2222 33333333333333333333 1 666666666666666666 6666666 1 888 5 5 1 00 1 4 77 66 0 66 2 888 1 4 55 0 99999999999999999999999999999999 4 222 4 4 44 2 1 4 4 333 66 66 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 55 4 4 00000 2 55 2222222222222 1 2 7777 3 000000000000000000000000000 0000 666 7777 1 55 0 00 888888 999999 22 3 44 3 555 3 3 4 1 6666 3 9999 3 3 111
lowQualScore : . . .... .... ....... .. ... ... ............................................................................................................................................................................... . ...... . . ... . ... . . . . .......... . . .. .. .. . . . .. ... . ....... ... ....... . . . . . . ...... .. ... ............................................................................. . . . . ......... . . .. . . ............... .. ... ................ .... ......... ......... . . . ...... . . . . ... .. . .. . ...... . .. . ............. . ................. .. . .. ... .... ...... . . . . .............. .. ...... . ......... . ............ ... ...... . . . . . .......... . . ..... .... . ... . .... .................... . .................. ....... . ... . . . .. . . .. .. . .. . ... . . .. . ................................ . ... . . .. . . . . ... .. .. . ............................................................................................................................ .. . . ..... . .. ............. . . .... . ........................... .... ... .... . .. . .. ...... ...... .. . .. . ... . . . . .... . .... . . ...
lowQualScore : 3 6 3333 1111 4444444 66 888 888 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 0 444444 8 0 000 0 444 2 1 0 7 4444444444 0 7 55 66 11 4 4 9 11 888 4 4444444 111 8888888 6 2 6 3 8 6 666666 66 888 77777777777777777777777777777777777777777777777777777777777777777777777777777 6 3 0 0 555555555 2 6 00 6 4 777777777777777 55 888 8888888888888888 4444 555555555 222222222 4 6 5 555555 1 5 6 0 444 22 2 44 6 888888 1 22 5 5555555555555 1 66666666666666666 22 6 00 444 7777 666666 0 0 0 8 33333333333333 33 555555 0 444444444 8 555555555555 888 888888 5 2 0 2 4 2222222222 2 4 99999 0000 5 888 7 1111 44444444444444444444 0 999999999999999999 2222222 0 666 7 7 4 33 7 3 99 99 8 99 2 888 0 0 55 9 77777777777777777777777777777777 0 555 0 0 55 1 9 4 4 999 44 22 7 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 55 0 0 00000 0 55 0000000000000 6 4 7777 8 000000000000000000000000000 4444 444 7777 0 77 1 88 888888 111111 88 3 66 3 888 3 3 5 0 5555 6 1111 6 6 555
consensus : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTT----TA-----T-TTT--C---A---TT------------TT-----CCGNATT-------AAATTCT--GGA-------------------TTC------AA--------TCCCA-------------A---AT-TTT-TA--GG---A-A--CTTT----T-------AC-----T-----TT------------------TGTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
Reference ( family-341 ) : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTT----TA-----T-TTT--C---A---TT------------TT-----CCANATT-------AAATTCT--GGA-------------------TTC------AA--------TCCCA-------------A---AT-TTT-TA--GG---A-A--CTTT----T-------AC-----T-----TT------------------TGTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----TTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATANTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
gi|1 : ATTCCATTCATTATACTCAGTGTTGAAAAAC-TAAAA-ACT-C-TTTT----TACTGTCT-TTTAAC---A---CT------------TTAAATTCTGAATTCAATCCTAAATTTTTAGGAAC-----------------TTT------TA--------TCGTA-------------T---AT-TTT-TT--TC---A-A--TTTTGGTTT-------AT-----T-----TTACAAGTATACCCCCTCTGTGTGTAAGGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCGT-TT--TT----TTT-TTT-T-ATTAATTTCTTACAAAACATCTTTTCTTATATACTAGTAAGTAGGCAAAACATTGGAGATTATAACAAAATACAAATACGGCACGAATATTCTA--TTTTATAATCAG--AAAAA--AA-T-ATA-----GATCGTCATATGCATTAATAT----AA---AATGGGCA-T-------TTTA--TTTGTC--AC--TTTAAA-TATG-ACA-TATTGTAATAC----TCCTGACATCAA------A--A---TA-----T----A---------------A--------------AAGGTACAGTAGAGAAAG------------------CACATTAACT-GTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATCAAACTTATACCGTCAAAAATTAAAAACAAATAG-AAT--ATTA-TACCACTA--C----AA------CC--GT---TTT--GACTTTTGCCAAATTT----GCCA---------ATTTT---------CGAAAT-TTAACATG------TTACAATACGTCGCCCTGACATCAAACTATAAAATATACCACA---GAAAAAGT--CATCATCTTTCCTAATACATCAGCTGAAAAT------G-TGACAATATTTATACATCAAAGTTCATCA-CATTG-------------AAACAA--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-TGGC-TTTTTGTCAGTTTT-----------GAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTTTTATCAAT------------TACT---AGG------TATGGCAGA--------------CCTTCATACTATATCAGTTA-TA------TAAACTTTCTTCTGAAAAAAAA-A--ACAACAACATCTAGTGTTTGGTTTACATCCGCCA----ATGT---A----TATAA-------AAACA------------------ATTCAAAT-------TCA
gi|1 : AAAACAATTCAA--AT-T---CACTGGAAAGAGACATACAGTAATATTTACACAT-AGTAAGA--CTGGAAT------------CTAGAAAGTCAAAC------ACTC-T-CCGA-CCA-TACTGACCTGTCT-AACATGATTG------ATTTTAA--------------A-CA-AAAACAGGAAATCGTC-A---TTAT---ACAATCTGTA-TTCTTTTAAAATATGACCACCGA----------------------CGAAACAGTGATCAATTAATTCATGCA-----------------------A-----------------------CCGTT-----------------------A--AACATTGTGGTT-T-TAGACGATTTATTCGTG-----AAA-TG--TCATGAAA-------------ATCACGAATGATA---CAATTTTGA-------------A-------------AACTGGTGTGAAGAAAATT---AAA---A----GTCTTAATCATTTTCAACGCTTG-ATTTTT----TTAATAAAAT-A--CTAAGAA-AAG-C-A---A-GCGTCCCAGATGATCAAGGCTTAAAACA--T-AGGGAATTTTCCAAGTTACGAACGTGTCCGAAGTTACCCTG-------TT-T-T-CCGATTTAATCATAGActggaaagagacatacagtaatatttacacatagtaagactggaatctagaaagtcaaacactctccgaccatactgacctgtctaacatgattgattttaaacaaaaacaggaaatcgtcattatacaatctgtattcttttaaaatatgaccaccgacgaaacagtgatcaattaattcatgcaaccgttaaacattgtggttttagacgatttattcgtgaaatgtcatgaaaatcacgaatgatacaattttgaaaactggtgtgaagaaaattaaaagtcttaatcattttcaacgcttgatttttttaataaaatactaagaaaagcaagcgtcccagatgatcaaggcttaaaacatagggaattttccaagttacgaacgtgtccgaagttaccctgttttccgatttaatcatagacgaaa
gi|10 : attccattcattatactcagtgttgaaaaactaaaaactctttttactgtcttttaacactttaaattctgaattcaatcctaaatttttaggaacttttatcgtatatttttttcaattttggtttattttacaagtataccccctctgtgtgtaaggtacaatattctgactcaagtcttccatattcgttttttttttttattaatttcttacaaaacatcttttcttatatactagtaagtaggcaaaacattggagattataacaaaatacaaatacggcacgaatattctattttataatcagaaaaaaatatagatcgtcatatgcattaatataaaatgggcattttatttgtcactttaaatatgacatattgtaatactcctgacatcaaaatataaaaggtacagtagagaaagcacattaactgttttaatacatcaactgataatgcaaaaataccaatatatcaaacttataccgtcaaaaattaaaaacaaatagaatattataccactacaaccgttttgacttttgccaaatttgccaattttcgaaatttaacatgttacaatacgtcgccctgacatcaaactataaaatataccacagaaaaagtcatcatctttcctaatacatcagctgaaaatgtgacaatatttatacatcaaagttcatcacattgaaacaattagaatattgtacccctaccccattttggctttttgtcagttttgaagggtttcatgttacaattagttagccttttatcaattactaggtatggcagaccttcatactatatcagttatataaactttcttctgaaaaaaaaaacaacaacatctagtgtttggtttacatccgccaatgtatataGTATTCAATCCATAATACTCAATGTTTAAAA-C-TAAAA-AAG-G-TTTTATTTCA-----T-TTT--CCACA---TTAAA---------TT-----CTGGATT-------CAATCCC--AAA-------------------GTTGTAGGAAA--------TTTCACCGGATATTGTTTA---ATGTTT-TA--TG---T-A--TTTT----TCAAGTATAC-----TCCCTCTC------------------TGTCCAAAGTACAATATTCTT-AC---T-TAAATCTTCCATATTGAT-TTAGTTA---TTTGTTT-T-AACCATTTCTTACAAAACATCTAGTGTTATATACTAGTAGGTAGACAAAACATCGGAGATTA----------CAAATATGGCAATAATATTTCA--TAACAGGTTCAGAAAAAAA--AA-T-GTATGTTAGATCTTCATTTTCATTAATATT-ATAA---AATGGGCA-T-------TTAA--CATGT----CACTTTGAATTACA-ACA-TATTGCAATAAGTAATCCTGACATCAA------A--A---TA-----T----A---------------AAAGGTACAGTTGACAA--------------AG------------------CACACTAAC--GTTTTAATACATTA-ACTGTTAATG-CAAAATACAAAAATGTACCAATATAGTAAACATTTACCGTCTAAAATTAAAAACAAACAC-AAT--ATAATTACCCCTA--C----CA------CCTATTAAGTTT--AAcgaaa
gi|11 : ACAT-------AGAAATAAC-C-A-T-GAACATCTTGTT--CTTTTCC--CC-GAACACTCTTTAATTATGT---CAATGAAACGGGCCAAACGGCAATATTTTCACGT-AGTAAGA--C-------------------------G------------AGTA-T-C-AG-CC----------TGTCC-AAAATGAACGTTCTACATGCTTACCCGTGTGTAGGTTATTA-ACA-CATTTAATCGTCCACC-TTA---CACAATCCTTC-TCCTTTAAAAACATGACCACCGA----------------------C---------------------AT--A-----------------------ACAGTTATTAGTAAACACACACTACCTTA-----------------------A--AACATTGTTTTTCT-AAGACGATTTATTCGTG-----AAACTG--TCATGACA-------------ATCAC-AATAACAGCCATATTTTGGTTTTCACGGGAGAT-------------AACTC-T-TGCCGAAAATTGGGAGA---A----GTCTTTATCATTTacatatttattttataattt
gi|11 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaCATTTCAGATATTCAAGAC-T---------TAGCGGAATTCACAAGTTACGGATTTAACCGAGGTTACCC-GA----T-TT-T-TACCGATATCGTTcagatattcaagacttagcggaattcacaagttacggatttaaccgaggttacccgatttttaccgatatcgttctacatagaatagctttaa
gi|12 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaacatagaaataaccatgaacatcttgttcttttccccgaacactctttaattatgtcaatgaaacgggccaaacggcaatattttcacgtagtaagacgagtatcagcctgtccaaaatgaacgttctacatgcttacccgtgtgtaggttattaacacatttaatcgtccaccttacacaatccttctcctttaaaaacatgaccaccgacataacagttattagtaaacacacactaccttaaaacattgtttttctaagacgatttattcgtgaaactgtcatgacaatcacaataacagccatattttggttttcacgggagataactcttgccgaaaattgggagaagtctttatATGTTTAAAAAC-TAAAA-CGA-C-TTTT----TA-----C-CTT--C---A---TT------------TT-----CAACATT-------AAATTCT--GGA-------------------TTC------AA--------TCCCA-------------A---TT-TTT-TA--GG---A-A--GTTT----T-------AC-----ctacatagaatagctttaa
gi|12 : ccTT----T-------CC-----T-----CTC-----------------TGTCCAAAGTACAGTATTATA-AC---T-CA--TCTACCATATTCAT-CTGGTTA---GTT-TTT-C-ATTCATTTCTTACAAAACATCTATTTCAATATACAAATAAGTAGACAAAACATTCGAAATTA----------CAAATATGACAAGAATATTTCC--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATT-ATGA---AATTGGCA-T-------TTTA--CCTCT----CACTTTAAAATATA-ATA-TATTGCAATAAGTAATTCTGACGTCAA------A--A---TA-----T----cgtatactttttcagttttggtgtattttataagcatattaatttcctctctgtccaaagtacagtattataactcatctaccatattcatctggttagtttttcattcatttcttacaaaacatctatttcaatatacaaataagtagacaaaacattcgaaattacaaatatgacaagaatatttccttacaggatcagaaaaaaatgtatgttagatcttcatattcattaatattatgaaattggcattttacctctcactttaaaatataatatattgcaataagtaattctgacgtcaaaatattga
gi|13 : ccatgtttaaaaactaaaacgactttttaccttcattttcaacattaaattctggattcaatcccaattttttaggaagttttaccgtatactttttcagttttggtgtattttataagcatattaaTATTCCATGTATAATACTCACTATTTATAAAC-TGAAATAAA-C-TTT-------------------C---A---TT------------CT-----CCAGATT-------TAACTCT--ACA-------------------TTT------AA--------CTACA-------------A---AT-TTT--A--GG---A-A--CGTT----T-------ACCGTATT-----TTATC---------------TGTCCAAAGTACAACAAACTG-AA---A-GAAGCCTTCTATATTCAG-ATGGTTA---TTT-GTT---ATCCATTAATTAAAAATCATCTATTGTTATA--CCAGTAACTAATCAAAACATTGGAGATTA----------CAGATATGACAATAATACATCA--TTACAGGATCAG-----AA--AA-T-GTTTGGTAAACCTTCTTATTCAATAACATC-ATCA---AGTG---A-T-------TTTT--CTCGT----CACTTTAAAATGTA-ACA-TGTTGCATTAAGTTAATCTGACATAAA------A--AAGGTA----------G---------------A--------------GA--------------AG------------------AAAATTCACT-TTtga
gi|14 : ------G------------ATTA-T-CCGA-CCA-CACTGAACTGTCT-AACATGAACGTTTTACATTTTAACCAAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTACCCCACAATCTTT---TCTTTAAAAATATGCCTACCGAAATAAACAGTGGTAATTTAATTC---------------------ATGCA-----------------------A-----------------------CTGTG-----------------------A--AATATTGCGTTT-T-AAGTCGATTTATTCGTG-----AAA-TA--TCACGGAA-------------ATCACGTTTGATA---ATATTTTGG-------------T-------------AACTCATGTTTAGAAAATT---TAA---A----GTCTAAATCA------GTGCTTGCCTTTTT----CCAAGAAAAA-C--CT------------A---A-GCGTCATAGATGATCAAGAC-TAAAAAA--Taa
gi|15 : ctaggaattgaaaagtcaagACATCAACAAACAGTCCAATTA-TGAAATTATT--TATATTAAGCTT--TTACCAACTGACATTCATAAAAAAA-AT--T---------A---A--GAAT-A--TA---GTACCCCT----AC-----C--------------------CAATTT--AC------------GGTT-CA------TTGCCAAAATCAAG-------TCTTTCTGATATCAAG------------AACTGAAAGG------TACAAAAGATCAAGCAATTTAATC--TCTTACTTTTTCAATTATT-------TACACTTTCTACTG----AAAA-AGCACACCAA---CTAAGTTTGGGTTTACATCCGCCA----ATGT---A----TGT-T-------TGATA------------------ATTaga
gi|16 : ATAAACAC--A----------------------C---------------------AC--G-----------------------A-----------------------CCTTA-----------------------A--AGCATTGTGTTT-TGAAGAGGATTTCTTTGTG-----AAACTGAATCACGAAA-------------GGCA------ATC---ATATTTGGG-------------TCATCACGGGAGATAATTTGTGTCTA-AAAATT---AATCTTA----GTTTTAATCAT-TTCAACACTT---TTTT-------------AT-C-----------A--C-AGTTA-GCTTCGAAGATAATCAATAC-T---------TAGGGGAAATCCCAAGTAACAGACTTATCTGAAATTACCC-TG----T-TT-T-TGCTGATTTCATTATgtcaattatggctgtctattata
gi|17 : aaaagtgatcaA----------------------C---------------------GT--G-----------------------A-----------------------CCTTA-----------------------A--AACACTGTGTTT-A-AAGACGATTTATTCGTG-----AAACTG--TTACGAAGCTATATTTCGGTCATCACGGGCGGGA----------GG-------------T-------------AACTCGTGTC--GAAAA-----AAA---ATGTAGTCTTAATCA---------------TTTTC-------------T-C-------AA-AG--C-A---A-GCGTCGCAGATAATCAATAT-T---------CAAGGGAAGTACCAAGTTACGGACGCATCCGAAGTCACCA-GA----TATA-T-A-CCGGTTTCGTTATGGAacatggaatacc
gi|18 : aaacgcGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTT----TA-----T-TTT--C---A---TT------------TC-----TC-------------AATCCG--GCA-------------------TTC------AA--------TCACA-------------AC--AT-TTT-Ttggaatac
gi|19 : atttgtatttacctttaaaGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTT----TA-----T-TTT--C---A---TT------------TC-----TC-------------AATCCG--GCA-------------------TTC------AA--------TCACA-------------AC--AT-TTT-Tttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|2 : atttgtatttacctttaaaGTATTCCATCCATAACACTCAATGTTTAAAA-C-TAAAA-AAA-A----------A-----TATTT--C---A---TT------------GT-----CCACATT-------AAATTCT--GGA-------------------TTC------AA--------TCCGA-------------A---AT-TTT-TA--GG---A-A--CTTT----T-------AC-----T-----TT------------------TGTCCAAAGTTCAATATTCTG-AC---T-AGAGTCTTCCGTATTCAT-TCGGTTG---TTT-CTT-T-AATCATTTCTTATAAAACATCTATTTTTGTATACTAGTAAGTAGACAAAACATTGGAAATTA----------TAAATATGGCAAGACTATTTCA--TTACAGGATCAG--AAAAA--AA-TTGTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTC--CTTGTC--ACACTTTATAATATA-ACA-TGTTGTAATAAGTTATTCAGACTTCAA------A--A---TA-----T----A---------------A--------------AA--------------TG------------------CACATTAACT-TTTTTAATACATCA-ACTGAAGATG-GAAAA---------ATACCAATATATCCAACTCTTATCGTCTAAAATTAAGAGCAAATAT-AAT--ACAA-TACCTCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATT------CTACAATACGTTGACCCGACATCGAATTATAAAAAATACCACA---GAAAAAGT-ATATTATTTTTCTTATTACATCAGCTGACAAT------G-TAAAGATACTAATATATCGAGTTT--TTACCATCT-------------AAA-AC--T---------T---A--GAAT-A--TT---GTACCCTT----AC-----CCCATT-T-CGAT-TTTTTGCCATTTTTGACCA--TTTTAAAGGGTTTCA------T-GTTGCAAGTA-G-------TTAGTCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TGCGTCTTACTATATCAATTATTAATTATCTAGACTTCCTTCTG----AAAA-AT-ACAACAA---CTAGTTTTGGGTTTACTTACGCCA----ATGT---A----TGT-C-------TGGCA------------------ATTCACAT-------GCAAATTAC-C-ACC-GAGTCCCTTTTTTTCATTTCT--CC-AAACACAATTTAA--ATGT---CACTTGAAAGGGACATACAGCAACATATACATGT-AGTAAAA--CTGG--C------------C------G------------ATTC-T-C-GA-TCA-CATCGAGCTGTCC-AACATGAACGTTCTATATTTTAACCCAGATAAAGGTTATCA-AGAACAT----TCGTC-A---TTATTCCATAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------AGTACGAATGTTA---ATAACTTGG-------------T-------------AACTCGTATGTAGAAAATT-----A---A----GTGTGAATCATCTTCGACGATTGCATTTTC----CTAAGAAAAC-C--CTATGAA-AA--C-A---A-GCATCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCTAATTTACGGGCTTACCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGAttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|20 : TTCATCCTTAATACATAACGTTTGAAAAC-TGTAA-AAA-C-ATCT----TA-----T-TTT--C---A---TT------------TT-----TCAAAAT-------AACTTCT--GGA-------------------TTC------AA--------TTCCA-------------A---TT-TTT-TA--GG---A-A--CTTC----T-------CC-----C-----TT------------------a
gi|20 : a------------------TATTCAACGTACAATAAAAGG-AC---A-CAAGTCTTCCATATTCAG-TTGATTA---TCT-TTT-T-ATTAATTTCTatatttgttctgttttggtatactttataagtatatctcctctctattcaacgtacaataaaaggacacaagtcttccatattcagttgattatctttttattaatttct
gi|21 : attcatccttaatacataacgtttgaaaactgtaaaaacatcttattttcatttttcaaaataacttctggattcaattccaattttttaggaacttctcccttatatttgttctgttttggtatactttataagtatatctcctctcACATGT-AGTAAGAGTTTGGAAA------------A------G-----------------T-A-AA-TCATCAGT---CTGTCC-AAAATGAACGTTCTACATTTTAACCAATGTTTTGGTTA--ATAAAATGGGCACTTGTC-AACCTTA---CACAATACCTC-TCCTTTAACAACATTGCCACCAA----------------------C---------------------AT--A-----------------------A-----------------------
gi|22 : aatacaattcaagataactctaaataccaCA------------------ATTCACAT-------ACAAATAAC-C-A-CTGAGTCCC--TTTTACATTT-C--CC-GAACGCTATTAAG--ATATGTCCAC-GGAAAAGACCAAACGTCAACATTTACATGTCGGTAAAA--CGGGaagttattattaaacacacacaacaaac
gi|23 : tttttttcttaattgtcagagttttctGACAT-AAATTATAAAGCATACCATA---GTAAAAGT-ATATTACGTTTCTTAATGCATCAGCTGACAAT------G-TAAACATATTAAAACGTCAAACTT--TCACCTTCG-------------AAA-AT--T---------TGA-A--GAAtccctagatccgcctatac
gi|24 : ataacgtttatctgcaataagAAAAGGACATGTAGCAACATTTACACGT-AGTAAGA--CTGGAAC------------C------GGGAAAGTCAACAATTC-TTC-AA-CCA-CACTGAGTTGTCC-AACATGAACATTCTACATTTTAACTCAGACTaa
gi|25 : GATAAG-T--CTAAGAA-AAG-C-G---A-GCGTTCCAGATGATCAAGTC-TAAAAAAAAT-AGGGGAGTTTCCAAGTCACGGACTTATCCGAAGTTGCCC-GATTTTT-TT-T-T-CTGATTTCGTTATGGAttattctataaaaat
gi|26 : TAAGAAAAGGC--TTAAGAA-AAG-C-A---A-GCGTCCAAGATGATCAAGAC-TAAACAA--TTACGGTAATTCCCAAGTTACTGACTTATCCGAAGTTATCC-GT----T-TTAT-G-TCTATTTCAATATGcagaat
gi|27 : AAGAA-AA--C-A---AAGCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGTAATTCCCATGTTTCGAACTTATCCGAAGTTACTC-GA----T-TT-TCC-CCGATTTCGTTATGGA
gi|28 : acTACCATA---GAAAAATT-GTGTTGAATTACTCAGTGCATCAGCTGACAAA------G-CAAAAATACTGATTCACCA----T--TTAAAATTTGG-----------AAA-AA--T---------T---A--AAAT-G--TA---GTACCCCA----AC-----CCcgg
gi|29 : g-------TTGGCCTGATATCAAA------------TACT---TCG------TACAGCAGATCAAGCAAATAA-TCCTTCTTACTATATCAATTAT-------CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CAAA
gi|3 : tggtttcatGTATTCTATCAATAATACTCAATGTTAAAAAAC-TAAAA-AGA-C-TTTT----TA-----C-TTT--C---A---TTTTCCACATTAAATT-----CTAGATTCAATTCCAAATTTTA-GGAACTTTTACCCGTATATTTCTTC------AA--------TTATA-------------GTGTAT-TTTATA--AGCA-A-A--CCCC------------AT-----T-----TC------------------TGTCCAAGGAACAACATTCTG-AC---T-CGCGTCTGTCATATTCAT-CAGGTTA---TTT-TTT-TTATTCATTTCTTACAAAACATATATTGTTATATATCAGTAA-TAGACAAAACAACGGAAATTA----------CAAAAATGGCAAGAATATTTAA--TTACAGGATCa
gi|3 : agACTTTAAAATATA-A----------A-AAGT-------ACA-------------G---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTA-TACATCA-ACTGATAATA-CAAAA---------ATACCAATATATTCAACTTTAACCATCTAAGATTAAAAACAAATAT-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TA---AACT---------TTTTTTTGCCA---------ATTTT---------CGAA-A-TTGACATG------TTACAATA-ATTGTCCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATATCATCCTT-TTAAAACATCAGCTGACAAT------G-TAAAAATACTAATACATCAATCTT--TCACCGTCT-------------AAA-AC--T---------T---A--CAAT-A--TT---GTACCCCT----AC-----CAAATT-T-CGGA-TTTTTGCAAATTTTGACAA--TTTAATAGGGTGTTA------T-GTTTCAATTA-G-------TTAGCCTGATATCAAACCTGATATCGAGTACT---AGG------TACAGCAGACCAAGCAAATGA-TCCTTCTTACT-------TTAT------------CTTACTTCTA----AAAA---------AA---CTAATTTTTGGTTTACATCAGCCA----ATGT---G----TGC-C-------TGCCATTTTTCAGTATTTAGTCTATTCACAA-------ACACATTAC-CAA-C-AAGTCCCTTTTTTCT-TTTCCTACC--AACACAATTTAA--ATAT---CACTAGAAAGGGGCATA-AGCAACATTTATGCAT-TGTAAGA--CTGGAATTTGGAAAAGCAAC------G------------TTTC-TCC-GA-CCA-CTCTGAGCTGTCT-AACATGAAGTTTCTACATTTCAAACCAGATTAAGGTAATC--AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACCACAGG----------------------C---------------------AT--C-----------------------A-----------------------CAGTG-----------------------ATCAA---------T-T-AAGTC-ATGCAACCATAAAACTAAA-TG--GTACGAAA-------------AGCACGAATGATA---ATATTTT-A-------------T-------------AACACGTGTATAGAAAATT-----A---A----GTCTAAATCCTCTTGGACGCATGCTTTTTT----ATAAGAAAAG-C--CTCAGAA-AA--CAA---A-GCGTCCCTGGTGATCAAGAC-TGAAAAA--TCAGGAAAATTCCCAAGTTACGGACTTATCCGAAGTTATTC-GAT---T-TT-T-T-CCAATTTttactttaaaatataaaaagtacagtagaaaaagcacattaacttttttatacatcaactgataatacaaaaataccaatatattcaactttaaccatctaagattaaaaacaaatataatataatacccctacccccttttaaacttttttttgccaattttcgaaattgacatgttacaataattgtcctgacatcaaattataaaatataccatagaaaaagtatatcatccttttaaaacatcagctgacaatgtaaaaatactaatacatcaatctttcaccgtctaaaacttacaatattgtacccctaccaaatttcggatttttgcaaattttgacaatttaatagggtgttatgtttcaattagttagcctgatatcaaacctgatatcgagtactaggtacagcagaccaagcaaatgatccttcttactttatcttacttctaaaaaaactaatttttggtttacatcagccaatgtgtgcctgccatttttcagtatttagtctattcacaaacacattaccaacaagtcccttttttcttttcctaccaacacaatttaaatatcactagaaaggggcataagcaacatttatgcattgtaagactggaatttggaaaagcaacgtttctccgaccactctgagctgtctaacatgaagtttctacatttcaaaccagattaaggtaatcaaaacaggcaatcgtcattatcccacaatctttattctttaacaatatgaccacaggcatcacagtgatcaattaagtcatgcaaccataaaactaaatggtacgaaaagcacgaatgataatattttataacacgtgtatagaaaattaagtctaaatcctcttggacgcatgcttttttataagaaaagcctcagaaaacaaagcgtccctggtgatcaagactgaaaaatcaggaaaattcccaagttacggacttatccgaagttattcgattttttccaatttgtg
gi|30 : aggtattctatcaataatactcaatgttaaaaaactaaaaagactttttactttcattttccacattaaattctagattcaattccaaattttaggaacttttacccgtatatttcttcaattatagtgtattttataagcaaaccccatttctgtccaaggaacaacattctgactcgcgtctgtcatattcatcaggttattttttttattcatttcttacaaaacatatattgttatatatcagtaatagacaaaacaacggaaattacaaaaatggcaagaatatttaattacaggatctt---A----GTCTAGATCTTCTGCAGCGCTTG-ATTTTCAAGACTTAGAAAAA-AAATTAGAAA-AA--C-A---A-GCGTCCCTAATGATCgtg
gi|4 : ATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAAACACTTT----TA-----T-TTT--C---AACATTCAA---------TT-----CTGGATTTAATTCCAAATTTTTAGGAACTG---------------TTA------AAGTATATTTTTCCGTTTGGGGTGT---A---AT-TTA-TA--AGTATA-C--CTCT----T--------------C-----TC------------------TGTCCAAAGTACTATATTCTG-TC---T-CAAGTCTGCTATATTCAT-TTGGTCAGGGTTT-TTT-T---TCGTTTCTTACAAAACATCTATTTTTATATTCTAGTAAGTAGACAAT-CAATGAAGATT-----------CGAATATGGCAATAATATTTTA--TTACAGGATCAG--AAAAA--AAAT-GTTTGTTAGATCTTCATATCCATAAATATC-ATAA---AACAGGCA-T-------TTTA--CTTGTC--AT--TTTAAAATATA-ACA-TATTGAAATTAATAATCCTGGCGTCAATTTCAAA--A---TG-----G----A---------------ACA------------GA--------------AG------------------AATATGTACTGTTTTTGCTACATTA-ACTGTTGATG-CAAAA---------ATACAAATATAATAAAAGTTTACCGTCTTAAATTAAAAACTAATAG-AAT--ATAA-TACCCCAA--C----CC------TCT-TT---TT---AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------T-------------CCTGACATCAGACTATAAAATATACCATA---GAAAAAGT-ATATCATCTTTCTTAAAACGTCAGTTGACAAT------G-TAAAAATACTAATATATCAAACTT--CTAAAACTTGAAA---------AAA-AA--A---------T---A--GAAT-A--TT---GTACCCCT----AC-----TTCATT-T-CGGC-TTTCCGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-CTTACAATTA-GCCTGATATCAACCTGATATCAAA------------TACT---AGGTAGATCTACAGGAGATCAATAGATTTA-TCTTTCTTACTATATACATTA-TA------TAGACTTTCT--TA----AAAA-A--A----AA---CTAATTTTGGGTTTACATCCGCCA----TTGT---G----TGT-C-------TGCCA------------------TTTTACATTTTTTTGTCAATTCACAA-A-C-AAATAC---TTTTTCATTT-C--CC-AAACACAATTTAA--GTGT---CACTGGAAAGGGACATACAGCAACATTTAGGCGT-AGTAAGA--CTGGAGTCGGGAAAGTCAAC------G------------ATTC-T-C-CAGCCA-CACTCAGT----------TGAACATTCAACATTTTATTCCAGATTACGGTTATCA-AAAACAGGCAATCGTC-A---TTTTCCCACAATCTTTA-TCCTTTAACAATATGACCATCGA----------------------C---------------------AT--A-----------------------A-----------------------CAGTAATTAAGTGATTCATGCAACCGTAA--AACATTGTGTTT-G-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ACCACGA------------------------------------------------TCGTGTGTAGAAAATT---AAA---A----GTCTAAATCATTTCCGta
gi|5 : TA--T----CC------CCT-TT---TT---GACT---------TTT----GACA---------ATTTTGCCTGTTTCCGAATACTT----TT------TTAAAATACATTGTCCTGACATCAAAT-----AACATACCATA---AAAAAGGT-ATATCATCTTTCTTATTACATCAGCTGTTAAT------G-TAAAAGTACTAATATATCAAACTT--TCACCATCT-------------AAA-AC--TTGAAAAAAAT---A--GAAT-A--TT---GTTCCCCT----A------CCAATT-T-CGGC-TTTTTGCCAATTTTGCCAAT-TTTC---GGGTTTCA------T-CTTACAA-TA---------------TGTTATCAAA------------TACT---AGG------TATAGCAGATCAAGTTAATTA-TCTTTCTTACTATATCAATT-TT------CTAGACATTCATCTT----AAAACA--AAAAAAA---ATACTTTTGGGTTTACATCCGCCATTTTATGTTCGACATTTGT-CAGTATTTTGTCA------------------ATTCACAT-------ATAAATAAC-C-A-C-GATTCCCTTTATT--ATTTCC--TC--AACACTATTTAA--ATGT---CACTTGAAAGGGCCATACAGCAACATATACATGT-AGTAAGA--CTGGAATCTGGAAAGTCAAC------G------------AATCTT-C-GA-CCA-CACTGAGCTGTCT-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AATACAGGCAATCGCC-A---TTATCCCACACTCTTTATTTTTTTAAAAATAAAACCACCGA----------------------C---------------------AT--AATAGTGATCAGTAAATTCAAGCAA-----------------------CCGTA-----------------------A--AATATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGATA-------------ATCACAAATGAAA---ATATTTTGG-------------T-------------AACTCGTGCGTAGAAAATT---AAA---A----GTCTAAATCATCTTCGGCGCAGGCTTTTTC----CGAAGAAAAT-C--CTAGGAATAG--C-A---A-GCATCCCACATGATCAAGAC-TAAAACA--TTAGGGTAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-TCT-TTGATGTCGTTATGGA
gi|6 : tttatattgtacagttccgctacggatgttacagaaattcgtttctcaaccacatttgtgtagcttagccaaccata------A--A---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTT-AATACATCC-ACTGATAATA-CAAAA---------TTACCAATATATTAAACATTTACCGTCTAAAATTAAAAACAAATAG-AAT--GTAA-TACCCCTA--C----CC------CCT-TT---TT---AACT---------TTT----GCCAGTTTTGCCAATTTT---------TGAATA-TTGACATG------TTACAATACGTTGTTCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATAT-----------------CAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCTTAAACTTAAAAA-AAA-AT--T---------T---A--GAAT-A--TT---GTTCCCCT----AC-----CCCATT-T-TGAC-TTTTTGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAG------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAGTTAC-A-----T-AGACTT-CTT-------AAAA-A--ACAACAA---CTAATTTTGG---TGTGTC----------TGT---A----T-T-T-------TGTCA------------------ATTCAAAT-------ACAAATTA----A-C-GAGTCCCTTTT--CCATTCCC--CCCAAACACAATTTAA--ATAT---CACTGGAGAGGGGTATACAGCAACATTTACACCT-AGTAAGA--CAGGAAT------------T------GGGAAAGTCAATGATTC-T-CCGA-CCA-TACTGAGCTGTCTTAACATGAAAGTTCTACATTTTAACCCAGATTATGGTTATCA-AAAACAGGCAGTTGTG-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACAACGGA----------------------C---------------------AT--AACTGATCAATTAAGTTATGAA--A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AATAATATTTATGCGCG-----AAA-TG--TCATGAAA-------------ATCACTAATGATA---ATATTTTTG-------------T-------------AACAGGTATGTAGAAAAAT---AAA---A----GTCTAAATCAACTTGGA-GTTTGCTTTTTA----ATAAGAAAAA-T--CTAAAAA-AAACC-A---A-GCGTCTCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCAAAGTTGCAGACTTATCTGAAGTTACTT-GATTTTT-TT-T-T-CCGAATTTGTTAtcgaata
gi|7 : GCAA-AATATTTGACTTTACAGA--CA---AAATATTAA-T-GCAT--CAAACTTT--TACTCTCTAAAATTTATAATTGAAAGAGTA-TAATACCCTTTCGACTTTTCGTAAATTTTTGAATATTTATA-CGTTACAA---GTTGTCCTGACATCAA------ATAA---TAAAAGGTCCCGA---------------A--------------AA--------------AG------------------TTTATAAACG-TCCTTAGTGTATCA-GCTGACAATGACACAA---------ATATTAATATGTTAGACTTTAAC--TCTAAATTTTAAAA-AAAT-G-AAT--GTGC-CACCGTTAATC----CCATTCGGCTT-TT---TTTCCAA-----------TTT----GACA---------ATTTTT--------CGAATG-GTAACATAGCGGTATCACAATATGTTGTCCTGGTATAAAAT-ATAAAAAAAAAGATACAGGAGAAATTTATATTAATTTTCTTTGTACATCCGCTGAAAAT------G-C-----TACTAATATATGAAAATT--TTACCGTCT-------------AAA-ATGATG--------T---A--TAAT-T--TA---GGATCATT----ACGTGATCCCTTTCT-CGGCTTTTTTGCCAA------------------------CA------C-GTTACAGTTA-A-------TTATTCTTAAATCAAA------------TAAA---AGA------TAAAGTAAAgg
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatAAA---------ATATTAATGCATCAAACTTTTACTCTCTAAAATTTATAATTGAAAG-AGT--ATAA-TACCC-----------------------T---TTC--GACT---------TTTC---GTAA---------ATTTT---------TGAATA-TTTATACG------TTACAA---GTTGTCCTGACATCAAATAATAAAAGGTCCC------GAAAAAGT-TTATAAACGTCCTTAGTGTATCAGCTGACAAT------GACACAAATATTAATATGTTAGACTT--TAAC--TCT-------------AAA-TT--T---------TAAAA--AAATGA--AT---GTGCCACCGTTAAT-----CCCA-T-T-CGGCTTTTTTTCCAA-TTTGACAATTTTTCGAATGGTAACATAGCGGT-ATCACAATAT-G-------TTGTCCTGGTATAAAA------------TAaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacAACATA-GCGGTATCACAATATGTTGTCCTGGTAT-AA------A--A---TA-----T----A---------------A--------------AA--------------AAAAAGATACAGGAGAAATTTATATTAATT-TTCTTTGTACATCC-GCTGAAAATG-C--------------TACTAATATATGAAAATTTTACCGTCTAAAATGATG------TAT-AAT--TTAG-GATCATTA--CGTGATC------CCT-TT---CTC--GGCT---------TTTTT--GCCA---------A------------------------CACG------TTACAGTTAATTATTCTTAAATCAAAT---AAAAGATAAAGTA---AAAATGGT-GTATTCATTTTCTTTGTGGAACAGCTGAAAAT------T-CTAAAATATTAAAACGTTATACTT--TTACCATTT-------------AAA-ATG-T---------T---AACAAAT-AGGGTAAAGTACCTCT----A------CCCATT-TGTGGCTTTTTTGCAAAT----------TTTCGAATGGTAGCG------T-GTTACAATAA-G-------TTACCCTtaaaaaaaaagatacaggagaaatttatattaattttctttgtacatccgctgaaaatgctactaatatatgaaaattttaccgtctaaaatgatgtataatttaggatcattacgtgatccctttctcggcttttttgccaacacgttacagttaattattcttaaatcaaataaaagataaagtaaaaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|8 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacaaaatattaatgcatcaaacttttactctctaaaatttataattgaaagagtataataccctttcgacttttcgtaaatttttgaatatttatacgttacaagttgtcctgacatcaaataataaaaggtcccgaaaaagtttataaacgtccttagtgtatcagctgacaatgacacaaatattaatatgttagactttaactctaaattttaaaaaaatgaatgtgccaccgttaatcccattcggctttttttccaatttgacaatttttcgaatggtT----TA-----T-TTT--C---A---TA------------AC-----CGACATT-------CAATTTT--CGA-------------------TTA------CA--------TTCCA-------------A---AT-CTA-TACCGT---ATATTCTTT----T--------CGTG--T-----TTGCC---------------TGTCCAAAGTGCAATACACCGCACGGATAAAAGCCCTCTATGTTCATGTTGG-TA---TTT-TTTGT-AAACATTTCTAACAAGTCGTATTTTGTTACATACAAGTTCGTAGCCAAAACATCGACTATTA----------CAATTA-GAAAATAATATTACA--AAACAGAAATAT--AAAAA--CA-T-GTATGATAGATTTTCATGTTCAATAACATC-ATTA---AATGG-------------TAA--CTTG--------------------------TTGTAGCAAGTAATCCTGGTAT--A------A--A---CA-----T----T---------------A--------------AA--------------AGT-----------------CACA--AA-----TTAAAAAAAACACATTAATAATG-CAAAG---------ATACTAACACGACACATTTTCGGCGTCTCCACTT-----TAATTAG-AATAAATAA-TAATCTT--------------------------------CC---------TTC----ACC----------ATTTT---------CGAACA-TT-ATATA------TAACAA-AAGTTATCCTGACATCAAGTAATAAAATGTACCCTA---GAAATTGT-TTATTAACTATCTTAGTAAATCATCTGAAAAT------G-TAAAAACAGTAATACATCAAACTG--GTACCATCT-------------AAA-AT--G---------T---A--tgcat
gi|9 : cCCATCCATAACA-------------AAC-TAAGA-AAA-C-TTTT----TA-----C-TTT--C---A---TT------------GT-----TCACATT-------AAATTCT--GGA-------------------TTA------AA--------TCCCA-------------A---AT-TTT-TA--GG---A-A--CTTT----T-------AC-----T-----ttgaaatgtaaattacaactgcttcatatttcatctgaccttcttgttttcatctcagtaaaacgctctgtctggactacagtcactgctatcaaacagatgtc
gi|9 : ----T-------AT-----C-----TT------------------TGTCCTAAGTATAATATTTTG-AC---A-GAAGTCTGCCATATTCAG-TTGGTTA---TTT-TTT-T-ATTCATTCCTAATAAAACATCTGTTGTTATATATAAGTAAGCAGACAAAACATTGGAAATTA----------CAAATATGGCAAGAATATTTAA--TTACAGGATCAGA-AAAAA--AA-T-GTTTGTTAGATCTTCATATTCATTAATAGT-ATAA---AATAGGCATT-------TTTT--CTTGTC---C-TTTTAAAATATA-ATA-TATTGCAATACGTAATCCTGACATCAA------A--A---TA-----T----AAAACGTACAGTAGAAA--------------AA--------------AG------------------CATGTTAACT-TTTTTAATACATCA-ATTGATAATG-TAAAA---------GTACTAATATATTTAACTTTTACCGTCTAAAATTAAAAACAAATAGAAAA--ATAA-TACCCTTA--C----CC------CC--TT---TTT--AA-T---------TTT----GCCA---------ATTTA---------CGAATA-TTTACATG------TTACAATATGTTGTCCTGACATCAAATTATAAAATATACCATA---Ggtatattttttcagttttggtgtattttatatgtatacatatctttgtcctaagtataatattttgacagaagtctgccatattcagttggttatttttttattcattcctaataaaacatctgttgttatatataagtaagcagacaaaacattggaaattacaaatatggcaagaatatttaattacaggatcagaaaaaaaatgtttgttagatcttcatattcattaatagtataaaataggcattttttcttgtccttttaaaatataatatattgcaatacgtaatcctgacatcaaaatataaaacgtacagtagaaaaaagcatgttaacttttttaatacatcaattgataatgtaaaagtactaatatatttaacttttaccgtctaaaattaaaaacaaatagaaaaataatacccttaccccctttttaattttgccaatttacgaatatttacatgttacaatatgttgtcctgacatcaaattataaaatataccatag
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|31 ): TATTGAACAGATCTGCCACGAACGTTGAGGACTGACATCGTTTCTCACCACATTTGTGTAATCTGGCCAACCGTAT
Alignments
lowQualScore : 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 111111 1111111111 11 1111111 2222222 77777777777777777777777777777777777777777777777777777777777777777777777777777 111111111 111111111111111 1111111111111111 1111 111111111 111111111 111111 4444444444444 22222222222222222 1 22222222222222 111111 111111111 222222222222 111111 555555555 11111 1111 1111 22222222222222222222 333333333333333333 1111111 11 11 11111111111111111111111111111111 111 111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11111 1 2222222222222 444444444444444444444444444 1111 11 111111 11 1111 111
lowQualScore : 7 3 0000 7777 8888888 8888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 4 111111 0 4 777 4 555 1 1 1 0 9999999999 5 0 55 00 66 4 4 1 77 777 4 4444444 777 8888888 3 1 3 1 5 3 999999 44 555 22222222222222222222222222222222222222222222222222222222222222222222222222222 3 1 4 4 444444444 0 3 55 3 0 222222222222222 66 555 6666666666666666 6666 444444444 888888888 1 3 9 000000 2 6 7 1 555 55 2 22 1 888888 3 44 0 3333333333333 3 00000000000000000 44 3 55 666 7777 999999 4 4 2 0 00000000000000 44 111111 4 222222222 2 000000000000 777 222222 0 0 5 0 0 111111111 2 0 00000 4444 2 888 0 2222 33333333333333333333 1 666666666666666666 6666666 1 888 5 5 1 00 1 4 77 66 0 66 2 888 1 4 55 0 99999999999999999999999999999999 4 222 4 4 44 2 1 4 4 333 66 66 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 55 4 4 00000 2 55 2222222222222 1 2 7777 000000000000000000000000000 0000 666 7777 1 55 0 00 888888 999999 22 3 44 3 555 3 3 4 1 6666 3 9999 3 3 111
lowQualScore : . . .... .... ....... ................................................................................................................................................................................................................ . ...... . . ... . ... . . . . .......... . . .. .. .. . . . .. ... . ....... ... ....... . . . . . . ...... .. ... ............................................................................. . . . . ......... . . .. . . ............... .. ... ................ .... ......... ......... . . . ...... . . . . ... .. . .. . ...... . .. . ............. . ................. .. . .. ... .... ...... . . . . .............. .. ...... . ......... . ............ ... ...... . . . . . ......... . . ..... .... . ... . .... .................... . .................. ....... . ... . . . .. . . .. .. . .. . ... . . .. . ................................ . ... . . .. . . . . ... .. .. . ............................................................................................................................ .. . . ..... . .. ............. . . .... ........................... .... ... .... . .. . .. ...... ...... .. . .. . ... . . . . .... . .... . . ...
lowQualScore : 3 6 3333 1111 4444444 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 0 444444 8 0 000 0 444 2 1 0 7 4444444444 0 7 55 66 11 4 4 9 11 888 4 4444444 111 8888888 6 2 6 3 8 6 666666 66 888 77777777777777777777777777777777777777777777777777777777777777777777777777777 6 3 0 0 555555555 2 6 00 6 4 777777777777777 55 888 8888888888888888 4444 555555555 222222222 4 6 5 555555 1 5 6 0 444 22 2 44 6 888888 1 22 5 5555555555555 1 66666666666666666 22 6 00 444 7777 666666 0 0 0 8 33333333333333 33 555555 0 444444444 8 555555555555 888 888888 5 2 0 2 4 222222222 2 4 99999 0000 5 888 7 1111 44444444444444444444 0 999999999999999999 2222222 0 666 7 7 4 33 7 3 99 99 8 99 2 888 0 0 55 9 77777777777777777777777777777777 0 555 0 0 55 1 9 4 4 999 44 22 7 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 55 0 0 00000 0 55 0000000000000 6 4 7777 000000000000000000000000000 4444 444 7777 0 77 1 88 888888 111111 88 3 66 3 888 3 3 5 0 5555 6 1111 6 6 555
consensus : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTT----TA-----T-TTT---------C---A---TT---TT-----CCGGATT-------A-------AATTCT--GGA-------------------TTC------AA--------TTNCA-------------A---AT-TTT-T--A--G-------G---A-A--CTTT-----------T-------AC-----T-----TT------------------TGTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
Reference ( family-341 ) : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTT----TA-----T-TTT---------C---A---TT---TT-----CCGNATT-------A-------AATTCT--GGA-------------------TTC------AA--------TCCCA-------------A---AT-TTT-T--A--G-------G---A-A--CTTT-----------T-------AC-----T-----TT------------------TGTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
gi|1 : ATTCCATTCATTATACTCAGTGTTGAAAAAC-TAAAA-ACT-C-TTTT----TACTGTCT-TTTAA-------C---A---CT---TTAAATTCTGAATTCAATCCTA-------AATTTTTAGGAAC-----------------TTT------TA--------TCGTA-------------T---AT-TTT-T--T--T-------C---A-A--TTTTGGTT-------T-------AT-----T-----TTACAAGTATACCCCCTCTGTGTGTAAGGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCGT-TT--TT----TTT-TTT-T-ATTAATTTCTTACAAAACATCTTTTCTTATATACTAGTAAGTAGGCAAAACATTGGAGATTATAACAAAATACAAATACGGCACGAATATTCTA--TTTTATAATCAG--AAAAA--AA-T-ATA-----GATCGTCATATGCATTAATAT----AA---AATGGGCA-T-------TTTA--TTTGTC--AC--TTTAAA-TATG-ACA-TATTGTAATAC----TCCTGACATCAA------A--A---TA-----T----A---------------A--------------AAGGTACAGTAGAGAAAG------------------CACATTAACT-GTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATCAAACTTATACCGTCAAAAATTAAAAACAAATAG-AAT--ATTA-TACCACTA--C----AA------CC--GT---TTT--GACTTTTGCCAAATTT----GCCA---------ATTTT---------CGAAAT-TTAACATG------TTACAATACGTCGCCCTGACATCAAACTATAAAATATACCACA---GAAAAAGT--CATCATCTTTCCTAATACATCAGCTGAAAAT------G-TGACAATATTTATACATCAAAGTTCATCA-CATTG-------------AAACAA--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-TGGC-TTTTTGTCAGTTTT-----------GAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTTTTATCAAT------------TACT---AGG------TATGGCAGA--------------CCTTCATACTATATCAGTTA-TA------TAAACTTTCTTCTGAAAAAAAA-A--ACAACAACATCTAGTGTTTGGTTTACATCCGCCA----ATGT---A----TATAA-------AAACA------------------ATTCAAAT-------TCA
gi|1 : AAAACAATTCAA--AT-T---CACTGGAAAGAGACATACAGTAATATTTACACAT-AGTAAGA--CTGGAAT------------CTAGAAAGTCAAAC------ACTC-T-CCGA-CCA-TACTGACCTGTCT-AACATGATTG------ATTTTAA--------------A-CA-AAAACAGGAAATCGTC-A---TTAT---ACAATCTGTA-TTCTTTTAAAATATGACCACCGA----------------------CGAAACAGTGATCAATTAATTCATGCA-----------------------A-----------------------CCGTT-----------------------A--AACATTGTGGTT-T-TAGACGATTTATTCGTG-----AAA-TG--TCATGAAA-------------ATCACGAATGATA---CAATTTTGA-------------A-------------AACTGGTGTGAAGAAAATT---AAA---A----GTCTTAATCATTTTCAACGCTTG-ATTTTT----TTAATAAAAT-A--CTAAGAA-AAG-C-A---A-GCGTCCCAGATGATCAAGGCTTAAAACA--T-AGGGAATTTTCCAAGTTACGAACGTGTCCGAAGTTACCCTG-------TT-T-T-CCGATTTAATCATAGActggaaagagacatacagtaatatttacacatagtaagactggaatctagaaagtcaaacactctccgaccatactgacctgtctaacatgattgattttaaacaaaaacaggaaatcgtcattatacaatctgtattcttttaaaatatgaccaccgacgaaacagtgatcaattaattcatgcaaccgttaaacattgtggttttagacgatttattcgtgaaatgtcatgaaaatcacgaatgatacaattttgaaaactggtgtgaagaaaattaaaagtcttaatcattttcaacgcttgatttttttaataaaatactaagaaaagcaagcgtcccagatgatcaaggcttaaaacatagggaattttccaagttacgaacgtgtccgaagttaccctgttttccgatttaatcatagacgaaa
gi|10 : attccattcattatactcagtgttgaaaaactaaaaactctttttactgtcttttaacactttaaattctgaattcaatcctaaatttttaggaacttttatcgtatatttttttcaattttggtttattttacaagtataccccctctgtgtgtaaggtacaatattctgactcaagtcttccatattcgttttttttttttattaatttcttacaaaacatcttttcttatatactagtaagtaggcaaaacattggagattataacaaaatacaaatacggcacgaatattctattttataatcagaaaaaaatatagatcgtcatatgcattaatataaaatgggcattttatttgtcactttaaatatgacatattgtaatactcctgacatcaaaatataaaaggtacagtagagaaagcacattaactgttttaatacatcaactgataatgcaaaaataccaatatatcaaacttataccgtcaaaaattaaaaacaaatagaatattataccactacaaccgttttgacttttgccaaatttgccaattttcgaaatttaacatgttacaatacgtcgccctgacatcaaactataaaatataccacagaaaaagtcatcatctttcctaatacatcagctgaaaatgtgacaatatttatacatcaaagttcatcacattgaaacaattagaatattgtacccctaccccattttggctttttgtcagttttgaagggtttcatgttacaattagttagccttttatcaattactaggtatggcagaccttcatactatatcagttatataaactttcttctgaaaaaaaaaacaacaacatctagtgtttggtttacatccgccaatgtatataGTATTCAATCCATAATACTCAATGTTTAAAA-C-TAAAA-AAG-G-TTTTATTTCA-----T-TTT---------CCACA---TTAAATT-----CTGGATT-------C-------AATCCC--AAA-------------------GTTGTAGGAAA--------TTTCACCGGATATTGTTTA---ATGTTT-T--A--T-------G---T-A--TTTT-----------TCAAGTATAC-----TCCCTCTC------------------TGTCCAAAGTACAATATTCTT-AC---T-TAAATCTTCCATATTGAT-TTAGTTA---TTTGTTT-T-AACCATTTCTTACAAAACATCTAGTGTTATATACTAGTAGGTAGACAAAACATCGGAGATTA----------CAAATATGGCAATAATATTTCA--TAACAGGTTCAGAAAAAAA--AA-T-GTATGTTAGATCTTCATTTTCATTAATATT-ATAA---AATGGGCA-T-------TTAA--CATGT----CACTTTGAATTACA-ACA-TATTGCAATAAGTAATCCTGACATCAA------A--A---TA-----T----A---------------AAAGGTACAGTTGACAA--------------AG------------------CACACTAAC--GTTTTAATACATTA-ACTGTTAATG-CAAAATACAAAAATGTACCAATATAGTAAACATTTACCGTCTAAAATTAAAAACAAACAC-AAT--ATAATTACCCCTA--C----CA------CCTATTAAGTTT--AAcgaaa
gi|11 : ACAT-------AGAAATAAC-C-A-T-GAACATCTTGTT--CTTTTCC--CC-GAACACTCTTTAATTATGT---CAATGAAACGGGCCAAACGGCAATATTTTCACGT-AGTAAGA--C-------------------------G------------AGTA-T-C-AG-CC----------TGTCC-AAAATGAACGTTCTACATGCTTACCCGTGTGTAGGTTATTA-ACA-CATTTAATCGTCCACC-TTA---CACAATCCTTC-TCCTTTAAAAACATGACCACCGA----------------------C---------------------AT--A-----------------------ACAGTTATTAGTAAACACACACTACCTTA-----------------------A--AACATTGTTTTTCT-AAGACGATTTATTCGTG-----AAACTG--TCATGACA-------------ATCAC-AATAACAGCCATATTTTGGTTTTCACGGGAGAT-------------AACTC-T-TGCCGAAAATTGGGAGA---A----GTCTTTATCATTTacatatttattttataattt
gi|11 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaCATTTCAGATATTCAAGAC-T---------TAGCGGAATTCACAAGTTACGGATTTAACCGAGGTTACCC-GA----T-TT-T-TACCGATATCGTTcagatattcaagacttagcggaattcacaagttacggatttaaccgaggttacccgatttttaccgatatcgttctacatagaatagctttaa
gi|12 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaacatagaaataaccatgaacatcttgttcttttccccgaacactctttaattatgtcaatgaaacgggccaaacggcaatattttcacgtagtaagacgagtatcagcctgtccaaaatgaacgttctacatgcttacccgtgtgtaggttattaacacatttaatcgtccaccttacacaatccttctcctttaaaaacatgaccaccgacataacagttattagtaaacacacactaccttaaaacattgtttttctaagacgatttattcgtgaaactgtcatgacaatcacaataacagccatattttggttttcacgggagataactcttgccgaaaattgggagaagtctttatATGTTTAAAAAC-TAAAA-CGA-C-TTTT----TA-----C-CTT---------C---A---TT---TT-----CAACATT-------A-------AATTCT--GGA-------------------TTC------AA--------TCCCA-------------A---TT-TTT-T--A--G-------G---A-A--GTTT-----------T-------AC-----ctacatagaatagctttaa
gi|12 : ccTT-----------T-------CC-----T-----CTC-----------------TGTCCAAAGTACAGTATTATA-AC---T-CA--TCTACCATATTCAT-CTGGTTA---GTT-TTT-C-ATTCATTTCTTACAAAACATCTATTTCAATATACAAATAAGTAGACAAAACATTCGAAATTA----------CAAATATGACAAGAATATTTCC--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATT-ATGA---AATTGGCA-T-------TTTA--CCTCT----CACTTTAAAATATA-ATA-TATTGCAATAAGTAATTCTGACGTCAA------A--A---TA-----T----cgtatactttttcagttttggtgtattttataagcatattaatttcctctctgtccaaagtacagtattataactcatctaccatattcatctggttagtttttcattcatttcttacaaaacatctatttcaatatacaaataagtagacaaaacattcgaaattacaaatatgacaagaatatttccttacaggatcagaaaaaaatgtatgttagatcttcatattcattaatattatgaaattggcattttacctctcactttaaaatataatatattgcaataagtaattctgacgtcaaaatattga
gi|13 : ccatgtttaaaaactaaaacgactttttaccttcattttcaacattaaattctggattcaatcccaattttttaggaagttttaccgtatactttttcagttttggtgtattttataagcatattaaTATTCCATGTATAATACTCACTATTTATAAAC-TGAAATAAA-C-TTT--------------------------C---A---TT---CT-----CCAGATT-------T-------AACTCT--ACA-------------------TTT------AA--------CTACA-------------A---AT-TTT----A--G-------G---A-A--CGTT-----------T-------ACCGTATT-----TTATC---------------TGTCCAAAGTACAACAAACTG-AA---A-GAAGCCTTCTATATTCAG-ATGGTTA---TTT-GTT---ATCCATTAATTAAAAATCATCTATTGTTATA--CCAGTAACTAATCAAAACATTGGAGATTA----------CAGATATGACAATAATACATCA--TTACAGGATCAG-----AA--AA-T-GTTTGGTAAACCTTCTTATTCAATAACATC-ATCA---AGTG---A-T-------TTTT--CTCGT----CACTTTAAAATGTA-ACA-TGTTGCATTAAGTTAATCTGACATAAA------A--AAGGTA----------G---------------A--------------GA--------------AG------------------AAAATTCACT-TTtga
gi|14 : ------G------------ATTA-T-CCGA-CCA-CACTGAACTGTCT-AACATGAACGTTTTACATTTTAACCAAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTACCCCACAATCTTT---TCTTTAAAAATATGCCTACCGAAATAAACAGTGGTAATTTAATTC---------------------ATGCA-----------------------A-----------------------CTGTG-----------------------A--AATATTGCGTTT-T-AAGTCGATTTATTCGTG-----AAA-TA--TCACGGAA-------------ATCACGTTTGATA---ATATTTTGG-------------T-------------AACTCATGTTTAGAAAATT---TAA---A----GTCTAAATCA------GTGCTTGCCTTTTT----CCAAGAAAAA-C--CT------------A---A-GCGTCATAGATGATCAAGAC-TAAAAAA--Taa
gi|15 : ctaggaattgaaaagtcaagACATCAACAAACAGTCCAATTA-TGAAATTATT--TATATTAAGCTT--TTACCAACTGACATTCATAAAAAAA-AT--T---------A---A--GAAT-A--TA---GTACCCCT----AC-----C--------------------CAATTT--AC------------GGTT-CA------TTGCCAAAATCAAG-------TCTTTCTGATATCAAG------------AACTGAAAGG------TACAAAAGATCAAGCAATTTAATC--TCTTACTTTTTCAATTATT-------TACACTTTCTACTG----AAAA-AGCACACCAA---CTAAGTTTGGGTTTACATCCGCCA----ATGT---A----TGT-T-------TGATA------------------ATTaga
gi|16 : ATAAACAC--A----------------------C---------------------AC--G-----------------------A-----------------------CCTTA-----------------------A--AGCATTGTGTTT-TGAAGAGGATTTCTTTGTG-----AAACTGAATCACGAAA-------------GGCA------ATC---ATATTTGGG-------------TCATCACGGGAGATAATTTGTGTCTA-AAAATT---AATCTTA----GTTTTAATCAT-TTCAACACTT---TTTT-------------AT-C-----------A--C-AGTTA-GCTTCGAAGATAATCAATAC-T---------TAGGGGAAATCCCAAGTAACAGACTTATCTGAAATTACCC-TG----T-TT-T-TGCTGATTTCATTATgtcaattatggctgtctattata
gi|17 : aaaagtgatcaA----------------------C---------------------GT--G-----------------------A-----------------------CCTTA-----------------------A--AACACTGTGTTT-A-AAGACGATTTATTCGTG-----AAACTG--TTACGAAGCTATATTTCGGTCATCACGGGCGGGA----------GG-------------T-------------AACTCGTGTC--GAAAA-----AAA---ATGTAGTCTTAATCA---------------TTTTC-------------T-C-------AA-AG--C-A---A-GCGTCGCAGATAATCAATAT-T---------CAAGGGAAGTACCAAGTTACGGACGCATCCGAAGTCACCA-GA----TATA-T-A-CCGGTTTCGTTATGGAacatggaatacc
gi|18 : aaacgcGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTT----TA-----T-TTT---------C---A---TT---TC-----TC--------------------AATCCG--GCA-------------------TTC------AA--------TCACA-------------AC--AT-TTT-T--tggaatac
gi|19 : atttgtatttacctttaaaGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTT----TA-----T-TTT---------C---A---TT---TC-----TC--------------------AATCCG--GCA-------------------TTC------AA--------TCACA-------------AC--AT-TTT-T--ttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|2 : atttgtatttacctttaaaGTATTCCATCCATAACACTCAATGTTTAAAA-C-TAAAA-AAA-A----------A-----TATTT---------C---A---TT---GT-----CCACATT-------A-------AATTCT--GGA-------------------TTC------AA--------TCCGA-------------A---AT-TTT-T--A--G-------G---A-A--CTTT-----------T-------AC-----T-----TT------------------TGTCCAAAGTTCAATATTCTG-AC---T-AGAGTCTTCCGTATTCAT-TCGGTTG---TTT-CTT-T-AATCATTTCTTATAAAACATCTATTTTTGTATACTAGTAAGTAGACAAAACATTGGAAATTA----------TAAATATGGCAAGACTATTTCA--TTACAGGATCAG--AAAAA--AA-TTGTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTC--CTTGTC--ACACTTTATAATATA-ACA-TGTTGTAATAAGTTATTCAGACTTCAA------A--A---TA-----T----A---------------A--------------AA--------------TG------------------CACATTAACT-TTTTTAATACATCA-ACTGAAGATG-GAAAA---------ATACCAATATATCCAACTCTTATCGTCTAAAATTAAGAGCAAATAT-AAT--ACAA-TACCTCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATT------CTACAATACGTTGACCCGACATCGAATTATAAAAAATACCACA---GAAAAAGT-ATATTATTTTTCTTATTACATCAGCTGACAAT------G-TAAAGATACTAATATATCGAGTTT--TTACCATCT-------------AAA-AC--T---------T---A--GAAT-A--TT---GTACCCTT----AC-----CCCATT-T-CGAT-TTTTTGCCATTTTTGACCA--TTTTAAAGGGTTTCA------T-GTTGCAAGTA-G-------TTAGTCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TGCGTCTTACTATATCAATTATTAATTATCTAGACTTCCTTCTG----AAAA-AT-ACAACAA---CTAGTTTTGGGTTTACTTACGCCA----ATGT---A----TGT-C-------TGGCA------------------ATTCACAT-------GCAAATTAC-C-ACC-GAGTCCCTTTTTTTCATTTCT--CC-AAACACAATTTAA--ATGT---CACTTGAAAGGGACATACAGCAACATATACATGT-AGTAAAA--CTGG--C------------C------G------------ATTC-T-C-GA-TCA-CATCGAGCTGTCC-AACATGAACGTTCTATATTTTAACCCAGATAAAGGTTATCA-AGAACAT----TCGTC-A---TTATTCCATAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------AGTACGAATGTTA---ATAACTTGG-------------T-------------AACTCGTATGTAGAAAATT-----A---A----GTGTGAATCATCTTCGACGATTGCATTTTC----CTAAGAAAAC-C--CTATGAA-AA--C-A---A-GCATCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCTAATTTACGGGCTTACCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGAttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|20 : TTCATCCTTAATACATAACGTTTGAAAAC-TGTAA-AAA-C-ATCT----TA-----T-TTT---------C---A---TT---TT-----TCAAAAT-------A-------ACTTCT--GGA-------------------TTC------AA--------TTCCA-------------A---TT-TTT-T--A--G-------G---A-A--CTTC-----------T-------CC-----C-----TT------------------a
gi|20 : a------------------TATTCAACGTACAATAAAAGG-AC---A-CAAGTCTTCCATATTCAG-TTGATTA---TCT-TTT-T-ATTAATTTCTatatttgttctgttttggtatactttataagtatatctcctctctattcaacgtacaataaaaggacacaagtcttccatattcagttgattatctttttattaatttct
gi|21 : attcatccttaatacataacgtttgaaaactgtaaaaacatcttattttcatttttcaaaataacttctggattcaattccaattttttaggaacttctcccttatatttgttctgttttggtatactttataagtatatctcctctcACATGT-AGTAAGAGTTTGGAAA------------A------G-----------------T-A-AA-TCATCAGT---CTGTCC-AAAATGAACGTTCTACATTTTAACCAATGTTTTGGTTA--ATAAAATGGGCACTTGTC-AACCTTA---CACAATACCTC-TCCTTTAACAACATTGCCACCAA----------------------C---------------------AT--A-----------------------A-----------------------
gi|22 : aatacaattcaagataactctaaataccaCA------------------ATTCACAT-------ACAAATAAC-C-A-CTGAGTCCC--TTTTACATTT-C--CC-GAACGCTATTAAG--ATATGTCCAC-GGAAAAGACCAAACGTCAACATTTACATGTCGGTAAAA--CGGGaagttattattaaacacacacaacaaac
gi|23 : tttttttcttaattgtcagagttttctGACAT-AAATTATAAAGCATACCATA---GTAAAAGT-ATATTACGTTTCTTAATGCATCAGCTGACAAT------G-TAAACATATTAAAACGTCAAACTT--TCACCTTCG-------------AAA-AT--T---------TGA-A--GAAtccctagatccgcctatac
gi|24 : ataacgtttatctgcaataagAAAAGGACATGTAGCAACATTTACACGT-AGTAAGA--CTGGAAC------------C------GGGAAAGTCAACAATTC-TTC-AA-CCA-CACTGAGTTGTCC-AACATGAACATTCTACATTTTAACTCAGACTaa
gi|25 : GATAAG-T--CTAAGAA-AAG-C-G---A-GCGTTCCAGATGATCAAGTC-TAAAAAAAAT-AGGGGAGTTTCCAAGTCACGGACTTATCCGAAGTTGCCC-GATTTTT-TT-T-T-CTGATTTCGTTATGGAttattctataaaaat
gi|26 : TAAGAAAAGGC--TTAAGAA-AAG-C-A---A-GCGTCCAAGATGATCAAGAC-TAAACAA--TTACGGTAATTCCCAAGTTACTGACTTATCCGAAGTTATCC-GT----T-TTAT-G-TCTATTTCAATATGcagaat
gi|27 : AAGAA-AA--C-A---AAGCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGTAATTCCCATGTTTCGAACTTATCCGAAGTTACTC-GA----T-TT-TCC-CCGATTTCGTTATGGA
gi|28 : acTACCATA---GAAAAATT-GTGTTGAATTACTCAGTGCATCAGCTGACAAA------G-CAAAAATACTGATTCACCA----T--TTAAAATTTGG-----------AAA-AA--T---------T---A--AAAT-G--TA---GTACCCCA----AC-----CCcgg
gi|29 : g-------TTGGCCTGATATCAAA------------TACT---TCG------TACAGCAGATCAAGCAAATAA-TCCTTCTTACTATATCAATTAT-------CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CAAA
gi|3 : tggtttcatGTATTCTATCAATAATACTCAATGTTAAAAAAC-TAAAA-AGA-C-TTTT----TA-----C-TTTCATTTTCCAC---A---TTAAATT-----CTAGATTCAATTCCA-------AATTTTA-GGAACTTTTACCCGTATATTTCTTC------AA--------TTATA-------------GTGTAT-TTTAT--A--A-------GCA-A-A--CCCC-------------------AT-----T-----TC------------------TGTCCAAGGAACAACATTCTG-AC---T-CGCGTCTGTCATATTCAT-CAGGTTA---TTT-TTT-TTATTCATTTCTTACAAAACATATATTGTTATATATCAGTAA-TAGACAAAACAACGGAAATTA----------CAAAAATGGCAAGAATATTTAA--TTACAGGATCa
gi|3 : agACTTTAAAATATA-A----------A-AAGT-------ACA-------------G---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTA-TACATCA-ACTGATAATA-CAAAA---------ATACCAATATATTCAACTTTAACCATCTAAGATTAAAAACAAATAT-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TA---AACT---------TTTTTTTGCCA---------ATTTT---------CGAA-A-TTGACATG------TTACAATA-ATTGTCCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATATCATCCTT-TTAAAACATCAGCTGACAAT------G-TAAAAATACTAATACATCAATCTT--TCACCGTCT-------------AAA-AC--T---------T---A--CAAT-A--TT---GTACCCCT----AC-----CAAATT-T-CGGA-TTTTTGCAAATTTTGACAA--TTTAATAGGGTGTTA------T-GTTTCAATTA-G-------TTAGCCTGATATCAAACCTGATATCGAGTACT---AGG------TACAGCAGACCAAGCAAATGA-TCCTTCTTACT-------TTAT------------CTTACTTCTA----AAAA---------AA---CTAATTTTTGGTTTACATCAGCCA----ATGT---G----TGC-C-------TGCCATTTTTCAGTATTTAGTCTATTCACAA-------ACACATTAC-CAA-C-AAGTCCCTTTTTTCT-TTTCCTACC--AACACAATTTAA--ATAT---CACTAGAAAGGGGCATA-AGCAACATTTATGCAT-TGTAAGA--CTGGAATTTGGAAAAGCAAC------G------------TTTC-TCC-GA-CCA-CTCTGAGCTGTCT-AACATGAAGTTTCTACATTTCAAACCAGATTAAGGTAATC--AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACCACAGG----------------------C---------------------AT--C-----------------------A-----------------------CAGTG-----------------------ATCAA---------T-T-AAGTC-ATGCAACCATAAAACTAAA-TG--GTACGAAA-------------AGCACGAATGATA---ATATTTT-A-------------T-------------AACACGTGTATAGAAAATT-----A---A----GTCTAAATCCTCTTGGACGCATGCTTTTTT----ATAAGAAAAG-C--CTCAGAA-AA--CAA---A-GCGTCCCTGGTGATCAAGAC-TGAAAAA--TCAGGAAAATTCCCAAGTTACGGACTTATCCGAAGTTATTC-GAT---T-TT-T-T-CCAATTTttactttaaaatataaaaagtacagtagaaaaagcacattaacttttttatacatcaactgataatacaaaaataccaatatattcaactttaaccatctaagattaaaaacaaatataatataatacccctacccccttttaaacttttttttgccaattttcgaaattgacatgttacaataattgtcctgacatcaaattataaaatataccatagaaaaagtatatcatccttttaaaacatcagctgacaatgtaaaaatactaatacatcaatctttcaccgtctaaaacttacaatattgtacccctaccaaatttcggatttttgcaaattttgacaatttaatagggtgttatgtttcaattagttagcctgatatcaaacctgatatcgagtactaggtacagcagaccaagcaaatgatccttcttactttatcttacttctaaaaaaactaatttttggtttacatcagccaatgtgtgcctgccatttttcagtatttagtctattcacaaacacattaccaacaagtcccttttttcttttcctaccaacacaatttaaatatcactagaaaggggcataagcaacatttatgcattgtaagactggaatttggaaaagcaacgtttctccgaccactctgagctgtctaacatgaagtttctacatttcaaaccagattaaggtaatcaaaacaggcaatcgtcattatcccacaatctttattctttaacaatatgaccacaggcatcacagtgatcaattaagtcatgcaaccataaaactaaatggtacgaaaagcacgaatgataatattttataacacgtgtatagaaaattaagtctaaatcctcttggacgcatgcttttttataagaaaagcctcagaaaacaaagcgtccctggtgatcaagactgaaaaatcaggaaaattcccaagttacggacttatccgaagttattcgattttttccaatttgtg
gi|30 : aggtattctatcaataatactcaatgttaaaaaactaaaaagactttttactttcattttccacattaaattctagattcaattccaaattttaggaacttttacccgtatatttcttcaattatagtgtattttataagcaaaccccatttctgtccaaggaacaacattctgactcgcgtctgtcatattcatcaggttattttttttattcatttcttacaaaacatatattgttatatatcagtaatagacaaaacaacggaaattacaaaaatggcaagaatatttaattacaggatctt---A----GTCTAGATCTTCTGCAGCGCTTG-ATTTTCAAGACTTAGAAAAA-AAATTAGAAA-AA--C-A---A-GCGTCCCTAATGATCgtg
gi|4 : ATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAAACACTTT----TA-----T-TTT---------C---AACATTCAATT-----CTGGATTTAATTCCA-------AATTTTTAGGAACTG---------------TTA------AAGTATATTTTTCCGTTTGGGGTGT---A---AT-TTA-T--A--A-------GTATA-C--CTCT-----------T--------------C-----TC------------------TGTCCAAAGTACTATATTCTG-TC---T-CAAGTCTGCTATATTCAT-TTGGTCAGGGTTT-TTT-T---TCGTTTCTTACAAAACATCTATTTTTATATTCTAGTAAGTAGACAAT-CAATGAAGATT-----------CGAATATGGCAATAATATTTTA--TTACAGGATCAG--AAAAA--AAAT-GTTTGTTAGATCTTCATATCCATAAATATC-ATAA---AACAGGCA-T-------TTTA--CTTGTC--AT--TTTAAAATATA-ACA-TATTGAAATTAATAATCCTGGCGTCAATTTCAAA--A---TG-----G----A---------------ACA------------GA--------------AG------------------AATATGTACTGTTTTTGCTACATTA-ACTGTTGATG-CAAAA---------ATACAAATATAATAAAAGTTTACCGTCTTAAATTAAAAACTAATAG-AAT--ATAA-TACCCCAA--C----CC------TCT-TT---TT---AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------T-------------CCTGACATCAGACTATAAAATATACCATA---GAAAAAGT-ATATCATCTTTCTTAAAACGTCAGTTGACAAT------G-TAAAAATACTAATATATCAAACTT--CTAAAACTTGAAA---------AAA-AA--A---------T---A--GAAT-A--TT---GTACCCCT----AC-----TTCATT-T-CGGC-TTTCCGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-CTTACAATTA-GCCTGATATCAACCTGATATCAAA------------TACT---AGGTAGATCTACAGGAGATCAATAGATTTA-TCTTTCTTACTATATACATTA-TA------TAGACTTTCT--TA----AAAA-A--A----AA---CTAATTTTGGGTTTACATCCGCCA----TTGT---G----TGT-C-------TGCCA------------------TTTTACATTTTTTTGTCAATTCACAA-A-C-AAATAC---TTTTTCATTT-C--CC-AAACACAATTTAA--GTGT---CACTGGAAAGGGACATACAGCAACATTTAGGCGT-AGTAAGA--CTGGAGTCGGGAAAGTCAAC------G------------ATTC-T-C-CAGCCA-CACTCAGT----------TGAACATTCAACATTTTATTCCAGATTACGGTTATCA-AAAACAGGCAATCGTC-A---TTTTCCCACAATCTTTA-TCCTTTAACAATATGACCATCGA----------------------C---------------------AT--A-----------------------A-----------------------CAGTAATTAAGTGATTCATGCAACCGTAA--AACATTGTGTTT-G-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ACCACGA------------------------------------------------TCGTGTGTAGAAAATT---AAA---A----GTCTAAATCATTTCCGta
gi|5 : TA--T----CC------CCT-TT---TT---GACT---------TTT----GACA---------ATTTTGCCTGTTTCCGAATACTT----TT------TTAAAATACATTGTCCTGACATCAAAT-----AACATACCATA---AAAAAGGT-ATATCATCTTTCTTATTACATCAGCTGTTAAT------G-TAAAAGTACTAATATATCAAACTT--TCACCATCT-------------AAA-AC--TTGAAAAAAAT---A--GAAT-A--TT---GTTCCCCT----A------CCAATT-T-CGGC-TTTTTGCCAATTTTGCCAAT-TTTC---GGGTTTCA------T-CTTACAA-TA---------------TGTTATCAAA------------TACT---AGG------TATAGCAGATCAAGTTAATTA-TCTTTCTTACTATATCAATT-TT------CTAGACATTCATCTT----AAAACA--AAAAAAA---ATACTTTTGGGTTTACATCCGCCATTTTATGTTCGACATTTGT-CAGTATTTTGTCA------------------ATTCACAT-------ATAAATAAC-C-A-C-GATTCCCTTTATT--ATTTCC--TC--AACACTATTTAA--ATGT---CACTTGAAAGGGCCATACAGCAACATATACATGT-AGTAAGA--CTGGAATCTGGAAAGTCAAC------G------------AATCTT-C-GA-CCA-CACTGAGCTGTCT-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AATACAGGCAATCGCC-A---TTATCCCACACTCTTTATTTTTTTAAAAATAAAACCACCGA----------------------C---------------------AT--AATAGTGATCAGTAAATTCAAGCAA-----------------------CCGTA-----------------------A--AATATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGATA-------------ATCACAAATGAAA---ATATTTTGG-------------T-------------AACTCGTGCGTAGAAAATT---AAA---A----GTCTAAATCATCTTCGGCGCAGGCTTTTTC----CGAAGAAAAT-C--CTAGGAATAG--C-A---A-GCATCCCACATGATCAAGAC-TAAAACA--TTAGGGTAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-TCT-TTGATGTCGTTATGGA
gi|6 : tttatattgtacagttccgctacggatgttacagaaattcgtttctcaaccacatttgtgtagcttagccaaccata------A--A---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTT-AATACATCC-ACTGATAATA-CAAAA---------TTACCAATATATTAAACATTTACCGTCTAAAATTAAAAACAAATAG-AAT--GTAA-TACCCCTA--C----CC------CCT-TT---TT---AACT---------TTT----GCCAGTTTTGCCAATTTT---------TGAATA-TTGACATG------TTACAATACGTTGTTCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATAT-----------------CAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCTTAAACTTAAAAA-AAA-AT--T---------T---A--GAAT-A--TT---GTTCCCCT----AC-----CCCATT-T-TGAC-TTTTTGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAG------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAGTTAC-A------TAGACTT-CTT-------AAAA-A--ACAACAA---CTAATTTTGG---TGTGTC----------TGT---A----T-T-T-------TGTCA------------------ATTCAAAT-------ACAAATTA----A-C-GAGTCCCTTTT--CCATTCCC--CCCAAACACAATTTAA--ATAT---CACTGGAGAGGGGTATACAGCAACATTTACACCT-AGTAAGA--CAGGAAT------------T------GGGAAAGTCAATGATTC-T-CCGA-CCA-TACTGAGCTGTCTTAACATGAAAGTTCTACATTTTAACCCAGATTATGGTTATCA-AAAACAGGCAGTTGTG-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACAACGGA----------------------C---------------------AT--AACTGATCAATTAAGTTATGAA--A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AATAATATTTATGCGCG-----AAA-TG--TCATGAAA-------------ATCACTAATGATA---ATATTTTTG-------------T-------------AACAGGTATGTAGAAAAAT---AAA---A----GTCTAAATCAACTTGGA-GTTTGCTTTTTA----ATAAGAAAAA-T--CTAAAAA-AAACC-A---A-GCGTCTCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCAAAGTTGCAGACTTATCTGAAGTTACTT-GATTTTT-TT-T-T-CCGAATTTGTTAtcgaata
gi|7 : GCAA-AATATTTGACTTTACAGA--CA---AAATATTAA-T-GCAT--CAAACTTT--TACTCTCTAAAATTTATAATTGAAAGAGTA-TAATACCCTTTCGACTTTTCGTAAATTTTTGAATATTTATA-CGTTACAA---GTTGTCCTGACATCAA------ATAA---TAAAAGGTCCCGA---------------A--------------AA--------------AG------------------TTTATAAACG-TCCTTAGTGTATCA-GCTGACAATGACACAA---------ATATTAATATGTTAGACTTTAAC--TCTAAATTTTAAAA-AAAT-G-AAT--GTGC-CACCGTTAATC----CCATTCGGCTT-TT---TTTCCAA-----------TTT----GACA---------ATTTTT--------CGAATG-GTAACATAGCGGTATCACAATATGTTGTCCTGGTATAAAAT-ATAAAAAAAAAGATACAGGAGAAATTTATATTAATTTTCTTTGTACATCCGCTGAAAAT------G-C-----TACTAATATATGAAAATT--TTACCGTCT-------------AAA-ATGATG--------T---A--TAAT-T--TA---GGATCATT----ACGTGATCCCTTTCT-CGGCTTTTTTGCCAA------------------------CA------C-GTTACAGTTA-A-------TTATTCTTAAATCAAA------------TAAA---AGA------TAAAGTAAAgg
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatAAA---------ATATTAATGCATCAAACTTTTACTCTCTAAAATTTATAATTGAAAG-AGT--ATAA-TACCC-----------------------T---TTC--GACT---------TTTC---GTAA---------ATTTT---------TGAATA-TTTATACG------TTACAA---GTTGTCCTGACATCAAATAATAAAAGGTCCC------GAAAAAGT-TTATAAACGTCCTTAGTGTATCAGCTGACAAT------GACACAAATATTAATATGTTAGACTT--TAAC--TCT-------------AAA-TT--T---------TAAAA--AAATGA--AT---GTGCCACCGTTAAT-----CCCA-T-T-CGGCTTTTTTTCCAA-TTTGACAATTTTTCGAATGGTAACATAGCGGT-ATCACAATAT-G-------TTGTCCTGGTATAAAA------------TAaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacAACATA-GCGGTATCACAATATGTTGTCCTGGTAT-AA------A--A---TA-----T----A---------------A--------------AA--------------AAAAAGATACAGGAGAAATTTATATTAATT-TTCTTTGTACATCC-GCTGAAAATG-C--------------TACTAATATATGAAAATTTTACCGTCTAAAATGATG------TAT-AAT--TTAG-GATCATTA--CGTGATC------CCT-TT---CTC--GGCT---------TTTTT--GCCA---------A------------------------CACG------TTACAGTTAATTATTCTTAAATCAAAT---AAAAGATAAAGTA---AAAATGGT-GTATTCATTTTCTTTGTGGAACAGCTGAAAAT------T-CTAAAATATTAAAACGTTATACTT--TTACCATTT-------------AAA-ATG-T---------T---AACAAAT-AGGGTAAAGTACCTCT----A------CCCATT-TGTGGCTTTTTTGCAAAT----------TTTCGAATGGTAGCG------T-GTTACAATAA-G-------TTACCCTtaaaaaaaaagatacaggagaaatttatattaattttctttgtacatccgctgaaaatgctactaatatatgaaaattttaccgtctaaaatgatgtataatttaggatcattacgtgatccctttctcggcttttttgccaacacgttacagttaattattcttaaatcaaataaaagataaagtaaaaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|8 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacaaaatattaatgcatcaaacttttactctctaaaatttataattgaaagagtataataccctttcgacttttcgtaaatttttgaatatttatacgttacaagttgtcctgacatcaaataataaaaggtcccgaaaaagtttataaacgtccttagtgtatcagctgacaatgacacaaatattaatatgttagactttaactctaaattttaaaaaaatgaatgtgccaccgttaatcccattcggctttttttccaatttgacaatttttcgaatggtT----TA-----T-TTT---------C---A---TA---AC-----CGACATT-------C-------AATTTT--CGA-------------------TTA------CA--------TTCCA-------------A---AT-CTA-T--ACCG-------T---ATATTCTTT-----------T--------CGTG--T-----TTGCC---------------TGTCCAAAGTGCAATACACCGCACGGATAAAAGCCCTCTATGTTCATGTTGG-TA---TTT-TTTGT-AAACATTTCTAACAAGTCGTATTTTGTTACATACAAGTTCGTAGCCAAAACATCGACTATTA----------CAATTA-GAAAATAATATTACA--AAACAGAAATAT--AAAAA--CA-T-GTATGATAGATTTTCATGTTCAATAACATC-ATTA---AATGG-------------TAA--CTTG--------------------------TTGTAGCAAGTAATCCTGGTAT--A------A--A---CA-----T----T---------------A--------------AA--------------AGT-----------------CACA--AA-----TTAAAAAAAACACATTAATAATG-CAAAG---------ATACTAACACGACACATTTTCGGCGTCTCCACTT-----TAATTAG-AATAAATAA-TAATCTT--------------------------------CC---------TTC----ACC----------ATTTT---------CGAACA-TT-ATATA------TAACAA-AAGTTATCCTGACATCAAGTAATAAAATGTACCCTA---GAAATTGT-TTATTAACTATCTTAGTAAATCATCTGAAAAT------G-TAAAAACAGTAATACATCAAACTG--GTACCATCT-------------AAA-AT--G---------T---A--tgcat
gi|9 : cCCATCCATAACA-------------AAC-TAAGA-AAA-C-TTTT----TA-----C-TTTCATTGTTCAC---A---TTAAATT-----CTGGATT-------AAATCCCAAATTTTTAGGAAC-----------------TTT------TA--------CTGTA-------------T---AT-TTT-TTCA--GTTTTGGTG---T-A--TTTTATATGTATACAT-------AT-----C-----TT------------------TGTCCTAAGTATAATATTTTG-AC---A-GAAGTCTGCCATATTCAG-TTGGTTA---TTT-TTT-T-ATTCATTCCTAATAAAACATCTGTTGTTATATATAAGTAAGCAGACAAAACATTGGAAATTA----------CAAATATGGCAAGAATATTTAA--TTACAGGATCAGA-AAAAA--AA-T-GTTTGTTAGATCTTCATATTCATTAATAGT-ATAA---AATAGGCATT-------TTTT--CTTGTC---C-TTTTAAAATATA-ATA-TATTGCAATACGTAATCCTGACATCAA------A--A---TA-----T----AAAACGTACAGTAGAAA--------------AA--------------AG------------------CATGTTAACT-TTTTTAATACATCA-ATTGATAATG-TAAAA---------GTACTAATATATTTAACTTTTACCGTCTAAAATTAAAAACAAATAGAAAA--ATAA-TACCCTTA--C----CC------CC--TT---TTT--AA-T---------TTT----GCCA---------ATTTA---------CGAATA-TTTACATG------TTACAATATGTTGTCCTGACATCAAATTATAAAATATACCATA---Gttgaaatgtaaattacaactgcttcatatttcatctgaccttcttgttttcatctcagtaaaacgctctgtctggactacagtcactgctatcaaacagatgtc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|31 ): TATTGAACAGATCTGCCACGAACGTTGAGGACTGACATCGTTTCTCACCACATTTGTGTAATCTGGCCAACCGTAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 111111 1111111111 11 1111111 2222222 77777777777777777777777777777777777777777777777777777777777777777777777777777 111111111 111111111111111 1111111111111111 1111 111111111 111111111 111111 4444444444444 22222222222222222 1 22222222222222 111111 111111111 222222222222 111111 555555555 11111 1111 1111 22222222222222222222 333333333333333333 1111111 11 11 11111111111111111111111111111111 111 111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11111 1 2222222222222 444444444444444444444444444 1111 11 111111 11 1111 111
lowQualScore : 7 3 0000 8888888 44 555 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 55 4 111111 0 4 777 4 555 1 1 1 0 9999999999 5 0 55 00 66 4 4 1 77 777 4 4444444 777 8888888 3 1 3 1 5 3 999999 44 555 22222222222222222222222222222222222222222222222222222222222222222222222222222 3 1 4 4 444444444 0 3 55 3 0 222222222222222 66 555 6666666666666666 6666 444444444 888888888 1 3 9 000000 2 6 7 1 555 55 2 22 1 888888 3 44 0 3333333333333 3 00000000000000000 44 3 55 666 7777 999999 4 4 2 0 00000000000000 44 111111 4 222222222 2 000000000000 777 222222 0 0 5 0 0 111111111 2 0 00000 4444 2 888 0 2222 33333333333333333333 1 666666666666666666 6666666 1 888 5 5 1 00 1 4 77 66 0 66 2 888 1 4 55 0 99999999999999999999999999999999 4 222 4 4 44 2 1 4 4 333 66 66 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 55 4 4 00000 2 55 2222222222222 1 2 7777 000000000000000000000000000 0000 666 7777 1 55 0 00 888888 999999 22 3 44 3 555 3 3 4 1 6666 3 9999 3 3 111
lowQualScore : . . .... ....... .. ... ........................................................................................................................................................................................................................ .. . ...... . . ... . ... . . . . .......... . . .. .. .. . . . .. ... . ....... ... ....... . . . . . . ...... .. ... ............................................................................. . . . . ......... . . .. . . ............... .. ... ................ .... ......... ......... . . . ...... . . . . ... .. . .. . ...... . .. . ............. . ................. .. . .. ... .... ...... . . . . .............. .. ...... . ......... . ............ ... ...... . . . . . ......... . . ..... .... . ... . .... .................... . .................. ....... . ... . . . .. . . .. .. . .. . ... . . .. . ................................ . ... . . .. . . . . ... .. .. . ............................................................................................................................ .. . . ..... . .. ............. . . .... ........................... .... ... .... . .. . .. ...... ...... .. . .. . ... . . . . .... . .... . . ...
lowQualScore : 3 6 3333 4444444 66 888 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 55 0 444444 8 0 000 0 444 2 1 0 7 4444444444 0 7 55 66 11 4 4 9 11 888 4 4444444 111 8888888 6 2 6 3 8 6 666666 66 888 77777777777777777777777777777777777777777777777777777777777777777777777777777 6 3 0 0 555555555 2 6 00 6 4 777777777777777 55 888 8888888888888888 4444 555555555 222222222 4 6 5 555555 1 5 6 0 444 22 2 44 6 888888 1 22 5 5555555555555 1 66666666666666666 22 6 00 444 7777 666666 0 0 0 8 33333333333333 33 555555 0 444444444 8 555555555555 888 888888 5 2 0 2 4 222222222 2 4 99999 0000 5 888 7 1111 44444444444444444444 0 999999999999999999 2222222 0 666 7 7 4 33 7 3 99 99 8 99 2 888 0 0 55 9 77777777777777777777777777777777 0 555 0 0 55 1 9 4 4 999 44 22 7 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 55 0 0 00000 0 55 0000000000000 6 4 7777 000000000000000000000000000 4444 444 7777 0 77 1 88 888888 111111 88 3 66 3 888 3 3 5 0 5555 6 1111 6 6 555
consensus : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTTTA-----T-TTT--CA---TT------------TT-----CCGG-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TTNC---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
Reference ( family-341 ) : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTTTA-----T-TTT--CA---TT------------TT-----CCGG-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TTNC---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
gi|1 : ATTCCATTCATTATACTCAGTGTTGAAAAAC-TAAAA-ACT-C-TTTTTACTGTCT-TTTAACA---CT------------TTAAATTCTGA-ATTCAATCCTAAATTTTTAGGAAC-----------------TTT------------------TA---TCGT---A-------------T---AT-TT----T-T--T--T-------C----A-A--TTTTGGTT-------T-------A---------T-----T-----TTACAAGTATACCCCCTCTGT--GTGTAAGGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCGT-TT--TT----TTT-TTT-T-ATTAATTTCTTACAAAACATCTTTTCTTATATACTAGTAAGTAGGCAAAACATTGGAGATTATAACAAAATACAAATACGGCACGAATATTCTA--TTTTATAATCAG--AAAAA--AA-T-ATA-----GATCGTCATATGCATTAATAT----AA---AATGGGCA-T-------TTTA--TTTGTC--AC--TTTAAA-TATG-ACA-TATTGTAATAC----TCCTGACATCAA------A--A---TA-----T----A---------------A--------------AAGGTACAGTAGAGAAAG------------------CACATTAACT-GTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATCAAACTTATACCGTCAAAAATTAAAAACAAATAG-AAT--ATTA-TACCACTA--C----AA------CC--GT---TTT--GACTTTTGCCAAATTT----GCCA---------ATTTT---------CGAAAT-TTAACATG------TTACAATACGTCGCCCTGACATCAAACTATAAAATATACCACA---GAAAAAGT--CATCATCTTTCCTAATACATCAGCTGAAAAT------G-TGACAATATTTATACATCAAAGTTCATCA-CATTG-------------AAACAA--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-TGGC-TTTTTGTCAGTTTT-----------GAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTTTTATCAAT------------TACT---AGG------TATGGCAGA--------------CCTTCATACTATATCAGTTA-TA------TAAACTTTCTTCTGAAAAAAAA-A--ACAACAACATCTAGTGTTTGGTTTACATCCGCCA----ATGT---A----TATAA-------AAACA------------------ATTCAAAT-------TCA
gi|1 : AAAACAATTCAA--AT-T---CACTGGAAAGAGACATACAGTAATATTTACACAT-AGTAAGA--CTGGAAT------------CTAGAAAGTCAAAC------ACTC-T-CCGA-CCA-TACTGACCTGTCT-AACATGATTG------ATTTTAA--------------A-CA-AAAACAGGAAATCGTC-A---TTAT---ACAATCTGTA-TTCTTTTAAAATATGACCACCGA----------------------CGAAACAGTGATCAATTAATTCATGCA-----------------------A-----------------------CCGTT-----------------------A--AACATTGTGGTT-T-TAGACGATTTATTCGTG-----AAA-TG--TCATGAAA-------------ATCACGAATGATA---CAATTTTGA-------------A-------------AACTGGTGTGAAGAAAATT---AAA---A----GTCTTAATCATTTTCAACGCTTG-ATTTTT----TTAATAAAAT-A--CTAAGAA-AAG-C-A---A-GCGTCCCAGATGATCAAGGCTTAAAACA--T-AGGGAATTTTCCAAGTTACGAACGTGTCCGAAGTTACCCTG-------TT-T-T-CCGATTTAATCATAGActggaaagagacatacagtaatatttacacatagtaagactggaatctagaaagtcaaacactctccgaccatactgacctgtctaacatgattgattttaaacaaaaacaggaaatcgtcattatacaatctgtattcttttaaaatatgaccaccgacgaaacagtgatcaattaattcatgcaaccgttaaacattgtggttttagacgatttattcgtgaaatgtcatgaaaatcacgaatgatacaattttgaaaactggtgtgaagaaaattaaaagtcttaatcattttcaacgcttgatttttttaataaaatactaagaaaagcaagcgtcccagatgatcaaggcttaaaacatagggaattttccaagttacgaacgtgtccgaagttaccctgttttccgatttaatcatagacgaaa
gi|10 : attccattcattatactcagtgttgaaaaactaaaaactctttttactgtcttttaacactttaaattctgaattcaatcctaaatttttaggaacttttatcgtatatttttttcaattttggtttattttacaagtataccccctctgtgtgtaaggtacaatattctgactcaagtcttccatattcgttttttttttttattaatttcttacaaaacatcttttcttatatactagtaagtaggcaaaacattggagattataacaaaatacaaatacggcacgaatattctattttataatcagaaaaaaatatagatcgtcatatgcattaatataaaatgggcattttatttgtcactttaaatatgacatattgtaatactcctgacatcaaaatataaaaggtacagtagagaaagcacattaactgttttaatacatcaactgataatgcaaaaataccaatatatcaaacttataccgtcaaaaattaaaaacaaatagaatattataccactacaaccgttttgacttttgccaaatttgccaattttcgaaatttaacatgttacaatacgtcgccctgacatcaaactataaaatataccacagaaaaagtcatcatctttcctaatacatcagctgaaaatgtgacaatatttatacatcaaagttcatcacattgaaacaattagaatattgtacccctaccccattttggctttttgtcagttttgaagggtttcatgttacaattagttagccttttatcaattactaggtatggcagaccttcatactatatcagttatataaactttcttctgaaaaaaaaaacaacaacatctagtgtttggtttacatccgccaatgtatataGTATTCAATCCATAATACTCAATGTTTAAAA-C-TAAAA-AAG-G-TTTT-A-----T-TT---CA---TT------------TT-----CCAC-ATT-------AAATTCT--GGA-------------------TTCAATCCCAAAGTTGTAGGAAA---TTTC---ACCGGATATTGTTTA---ATGTT----T-T--A--T-------G----T-A--TTTT-----------TCAAGTATA---------C-----TCCCTCTC------------------T--GTCCAAAGTACAATATTCTT-AC---T-TAAATCTTCCATATTGAT-TTAGTTA---TTTGTTT-T-AACCATTTCTTACAAAACATCTAGTGTTATATACTAGTAGGTAGACAAAACATCGGAGATTA----------CAAATATGGCAATAATATTTCA--TAACAGGTTCAGAAAAAAA--AA-T-GTATGTTAGATCTTCATTTTCATTAATATT-ATAA---AATGGGCA-T-------TTAA--CATGT----CACTTTGAATTACA-ACA-TATTGCAATAAGTAATCCTGACATCAA------A--A---TA-----T----A---------------AAAGGTACAGTTGACAA--------------AG------------------CACACTAAC--GTTTTAATACATTA-ACTGTTAATG-CAAAATACAAAAATGTACCAATATAGTAAACATTTACCGTCTAAAATTAAAAACAAACAC-AAT--ATAATTACCCCTA--C----CA------CCTATTAAGTTT--AAcgaaa
gi|11 : ACAT-------AGAAATAAC-C-A-T-GAACATCTTGTT--CTTTTCC--CC-GAACACTCTTTAATTATGT---CAATGAAACGGGCCAAACGGCAATATTTTCACGT-AGTAAGA--C-------------------------G------------AGTA-T-C-AG-CC----------TGTCC-AAAATGAACGTTCTACATGCTTACCCGTGTGTAGGTTATTA-ACA-CATTTAATCGTCCACC-TTA---CACAATCCTTC-TCCTTTAAAAACATGACCACCGA----------------------C---------------------AT--A-----------------------ACAGTTATTAGTAAACACACACTACCTTA-----------------------A--AACATTGTTTTTCT-AAGACGATTTATTCGTG-----AAACTG--TCATGACA-------------ATCAC-AATAACAGCCATATTTTGGTTTTCACGGGAGAT-------------AACTC-T-TGCCGAAAATTGGGAGA---A----GTCTTTATCATTTacatatttattttataattt
gi|11 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaCATTTCAGATATTCAAGAC-T---------TAGCGGAATTCACAAGTTACGGATTTAACCGAGGTTACCC-GA----T-TT-T-TACCGATATCGTTcagatattcaagacttagcggaattcacaagttacggatttaaccgaggttacccgatttttaccgatatcgttctacatagaatagctttaa
gi|12 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaacatagaaataaccatgaacatcttgttcttttccccgaacactctttaattatgtcaatgaaacgggccaaacggcaatattttcacgtagtaagacgagtatcagcctgtccaaaatgaacgttctacatgcttacccgtgtgtaggttattaacacatttaatcgtccaccttacacaatccttctcctttaaaaacatgaccaccgacataacagttattagtaaacacacactaccttaaaacattgtttttctaagacgatttattcgtgaaactgtcatgacaatcacaataacagccatattttggttttcacgggagataactcttgccgaaaattgggagaagtctttatATGTTTAAAAAC-TAAAA-CGA-C-TTTTTA-----C-CTT--CA---TT------------TT-----CAAC-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TCCC---A-------------A---TT-TT----T-T--A--G-------G----A-A--GTTT-----------T-------A---------C-----ctacatagaatagctttaa
gi|12 : ccTT-----------T-------C---------C-----T-----CTC-----------------T--GTCCAAAGTACAGTATTATA-AC---T-CA--TCTACCATATTCAT-CTGGTTA---GTT-TTT-C-ATTCATTTCTTACAAAACATCTATTTCAATATACAAATAAGTAGACAAAACATTCGAAATTA----------CAAATATGACAAGAATATTTCC--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATT-ATGA---AATTGGCA-T-------TTTA--CCTCT----CACTTTAAAATATA-ATA-TATTGCAATAAGTAATTCTGACGTCAA------A--A---TA-----T----cgtatactttttcagttttggtgtattttataagcatattaatttcctctctgtccaaagtacagtattataactcatctaccatattcatctggttagtttttcattcatttcttacaaaacatctatttcaatatacaaataagtagacaaaacattcgaaattacaaatatgacaagaatatttccttacaggatcagaaaaaaatgtatgttagatcttcatattcattaatattatgaaattggcattttacctctcactttaaaatataatatattgcaataagtaattctgacgtcaaaatattga
gi|13 : ccatgtttaaaaactaaaacgactttttaccttcattttcaacattaaattctggattcaatcccaattttttaggaagttttaccgtatactttttcagttttggtgtattttataagcatattaaTATTCCATGTATAATACTCACTATTTATAAAC-TGAAATAAA-C-TTT---------------CA---TT------------CT-----CCAG-ATT-------TAACTCT--ACA-------------------TTT------------------AA---CTAC---A-------------A---AT-TT----T----A--G-------G----A-A--CGTT-----------T-------A---------CCGTATT-----TTATC---------------T--GTCCAAAGTACAACAAACTG-AA---A-GAAGCCTTCTATATTCAG-ATGGTTA---TTT-GTT---ATCCATTAATTAAAAATCATCTATTGTTATA--CCAGTAACTAATCAAAACATTGGAGATTA----------CAGATATGACAATAATACATCA--TTACAGGATCAG-----AA--AA-T-GTTTGGTAAACCTTCTTATTCAATAACATC-ATCA---AGTG---A-T-------TTTT--CTCGT----CACTTTAAAATGTA-ACA-TGTTGCATTAAGTTAATCTGACATAAA------A--AAGGTA----------G---------------A--------------GA--------------AG------------------AAAATTCACT-TTtga
gi|14 : ------G------------ATTA-T-CCGA-CCA-CACTGAACTGTCT-AACATGAACGTTTTACATTTTAACCAAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTACCCCACAATCTTT---TCTTTAAAAATATGCCTACCGAAATAAACAGTGGTAATTTAATTC---------------------ATGCA-----------------------A-----------------------CTGTG-----------------------A--AATATTGCGTTT-T-AAGTCGATTTATTCGTG-----AAA-TA--TCACGGAA-------------ATCACGTTTGATA---ATATTTTGG-------------T-------------AACTCATGTTTAGAAAATT---TAA---A----GTCTAAATCA------GTGCTTGCCTTTTT----CCAAGAAAAA-C--CT------------A---A-GCGTCATAGATGATCAAGAC-TAAAAAA--Taa
gi|15 : ctaggaattgaaaagtcaagACATCAACAAACAGTCCAATTA-TGAAATTATT--TATATTAAGCTT--TTACCAACTGACATTCATAAAAAAA-AT--T---------A---A--GAAT-A--TA---GTACCCCT----AC-----C--------------------CAATTT--AC------------GGTT-CA------TTGCCAAAATCAAG-------TCTTTCTGATATCAAG------------AACTGAAAGG------TACAAAAGATCAAGCAATTTAATC--TCTTACTTTTTCAATTATT-------TACACTTTCTACTG----AAAA-AGCACACCAA---CTAAGTTTGGGTTTACATCCGCCA----ATGT---A----TGT-T-------TGATA------------------ATTaga
gi|16 : ATAAACAC--A----------------------C---------------------AC--G-----------------------A-----------------------CCTTA-----------------------A--AGCATTGTGTTT-TGAAGAGGATTTCTTTGTG-----AAACTGAATCACGAAA-------------GGCA------ATC---ATATTTGGG-------------TCATCACGGGAGATAATTTGTGTCTA-AAAATT---AATCTTA----GTTTTAATCAT-TTCAACACTT---TTTT-------------AT-C-----------A--C-AGTTA-GCTTCGAAGATAATCAATAC-T---------TAGGGGAAATCCCAAGTAACAGACTTATCTGAAATTACCC-TG----T-TT-T-TGCTGATTTCATTATgtcaattatggctgtctattata
gi|17 : aaaagtgatcaA----------------------C---------------------GT--G-----------------------A-----------------------CCTTA-----------------------A--AACACTGTGTTT-A-AAGACGATTTATTCGTG-----AAACTG--TTACGAAGCTATATTTCGGTCATCACGGGCGGGA----------GG-------------T-------------AACTCGTGTC--GAAAA-----AAA---ATGTAGTCTTAATCA---------------TTTTC-------------T-C-------AA-AG--C-A---A-GCGTCGCAGATAATCAATAT-T---------CAAGGGAAGTACCAAGTTACGGACGCATCCGAAGTCACCA-GA----TATA-T-A-CCGGTTTCGTTATGGAacatggaatacc
gi|18 : aaacgcGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTTTA-----T-TTT--CA---TT------------TC-----TC--------------AATCCG--GCA-------------------TTC------------------AA---TCAC---A-------------AC--AT-TT----T-T--tggaatac
gi|19 : atttgtatttacctttaaaGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTTTA-----T-TTT--CA---TT------------TC-----TC--------------AATCCG--GCA-------------------TTC------------------AA---TCAC---A-------------AC--AT-TT----T-T--ttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|2 : atttgtatttacctttaaaGTATTCCATCCATAACACTCAATGTTTAAAA-C-TAAAA-AAA-A------A-----TATTT--CA---TT------------GT-----CCAC-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TCCG---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTTCAATATTCTG-AC---T-AGAGTCTTCCGTATTCAT-TCGGTTG---TTT-CTT-T-AATCATTTCTTATAAAACATCTATTTTTGTATACTAGTAAGTAGACAAAACATTGGAAATTA----------TAAATATGGCAAGACTATTTCA--TTACAGGATCAG--AAAAA--AA-TTGTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTC--CTTGTC--ACACTTTATAATATA-ACA-TGTTGTAATAAGTTATTCAGACTTCAA------A--A---TA-----T----A---------------A--------------AA--------------TG------------------CACATTAACT-TTTTTAATACATCA-ACTGAAGATG-GAAAA---------ATACCAATATATCCAACTCTTATCGTCTAAAATTAAGAGCAAATAT-AAT--ACAA-TACCTCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATT------CTACAATACGTTGACCCGACATCGAATTATAAAAAATACCACA---GAAAAAGT-ATATTATTTTTCTTATTACATCAGCTGACAAT------G-TAAAGATACTAATATATCGAGTTT--TTACCATCT-------------AAA-AC--T---------T---A--GAAT-A--TT---GTACCCTT----AC-----CCCATT-T-CGAT-TTTTTGCCATTTTTGACCA--TTTTAAAGGGTTTCA------T-GTTGCAAGTA-G-------TTAGTCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TGCGTCTTACTATATCAATTATTAATTATCTAGACTTCCTTCTG----AAAA-AT-ACAACAA---CTAGTTTTGGGTTTACTTACGCCA----ATGT---A----TGT-C-------TGGCA------------------ATTCACAT-------GCAAATTAC-C-ACC-GAGTCCCTTTTTTTCATTTCT--CC-AAACACAATTTAA--ATGT---CACTTGAAAGGGACATACAGCAACATATACATGT-AGTAAAA--CTGG--C------------C------G------------ATTC-T-C-GA-TCA-CATCGAGCTGTCC-AACATGAACGTTCTATATTTTAACCCAGATAAAGGTTATCA-AGAACAT----TCGTC-A---TTATTCCATAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------AGTACGAATGTTA---ATAACTTGG-------------T-------------AACTCGTATGTAGAAAATT-----A---A----GTGTGAATCATCTTCGACGATTGCATTTTC----CTAAGAAAAC-C--CTATGAA-AA--C-A---A-GCATCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCTAATTTACGGGCTTACCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGAttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|20 : TTCATCCTTAATACATAACGTTTGAAAAC-TGTAA-AAA-C-ATCTTA-----T-TTT--CA---TT------------TT-----TCAA-AAT-------AACTTCT--GGA-------------------TTC------------------AA---TTCC---A-------------A---TT-TT----T-T--A--G-------G----A-A--CTTC-----------T-------C---------C-----C-----TT------------------a
gi|20 : a-----TC------------------T--ATTCAACGTACAATAAAAGG-AC---A-CAAGTCTTCCATATTCAG-TTGATTA---TCT-TTT-T-ATTAATTTCTatatttgttctgttttggtatactttataagtatatctcctctctattcaacgtacaataaaaggacacaagtcttccatattcagttgattatctttttattaatttct
gi|21 : attcatccttaatacataacgtttgaaaactgtaaaaacatcttattttcatttttcaaaataacttctggattcaattccaattttttaggaacttctcccttatatttgttctgttttggtatactttataagtatatctcctcACATGT-AGTAAGAGTTTGGAAA------------A------G-----------------T-A-AA-TCATCAGT---CTGTCC-AAAATGAACGTTCTACATTTTAACCAATGTTTTGGTTA--ATAAAATGGGCACTTGTC-AACCTTA---CACAATACCTC-TCCTTTAACAACATTGCCACCAA----------------------C---------------------AT--A-----------------------A-----------------------
gi|22 : aatacaattcaagataactctaaataccaCA------------------ATTCACAT-------ACAAATAAC-C-A-CTGAGTCCC--TTTTACATTT-C--CC-GAACGCTATTAAG--ATATGTCCAC-GGAAAAGACCAAACGTCAACATTTACATGTCGGTAAAA--CGGGaagttattattaaacacacacaacaaac
gi|23 : tttttttcttaattgtcagagttttctGACAT-AAATTATAAAGCATACCATA---GTAAAAGT-ATATTACGTTTCTTAATGCATCAGCTGACAAT------G-TAAACATATTAAAACGTCAAACTT--TCACCTTCG-------------AAA-AT--T---------TGA-A--GAAtccctagatccgcctatac
gi|24 : ataacgtttatctgcaataagAAAAGGACATGTAGCAACATTTACACGT-AGTAAGA--CTGGAAC------------C------GGGAAAGTCAACAATTC-TTC-AA-CCA-CACTGAGTTGTCC-AACATGAACATTCTACATTTTAACTCAGACTaa
gi|25 : GATAAG-T--CTAAGAA-AAG-C-G---A-GCGTTCCAGATGATCAAGTC-TAAAAAAAAT-AGGGGAGTTTCCAAGTCACGGACTTATCCGAAGTTGCCC-GATTTTT-TT-T-T-CTGATTTCGTTATGGAttattctataaaaat
gi|26 : TAAGAAAAGGC--TTAAGAA-AAG-C-A---A-GCGTCCAAGATGATCAAGAC-TAAACAA--TTACGGTAATTCCCAAGTTACTGACTTATCCGAAGTTATCC-GT----T-TTAT-G-TCTATTTCAATATGcagaat
gi|27 : AAGAA-AA--C-A---AAGCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGTAATTCCCATGTTTCGAACTTATCCGAAGTTACTC-GA----T-TT-TCC-CCGATTTCGTTATGGA
gi|28 : acTACCATA---GAAAAATT-GTGTTGAATTACTCAGTGCATCAGCTGACAAA------G-CAAAAATACTGATTCACCA----T--TTAAAATTTGG-----------AAA-AA--T---------T---A--AAAT-G--TA---GTACCCCA----AC-----CCcgg
gi|29 : g-------TTGGCCTGATATCAAA------------TACT---TCG------TACAGCAGATCAAGCAAATAA-TCCTTCTTACTATATCAATTAT-------CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CAAA
gi|3 : tggtttcatGTATTCTATCAATAATACTCAATGTTAAAAAAC-TAAAA-AGA-C-TTTTTA-----C-TTT--CA---TTTTCCACATTAAATT-----CTAG-ATTCAATTCCAAATTTTA-GGAACTTTTACCCGTATATTTCTTC------------------AA---TTAT---A-------------GTGTAT-TT----TAT--A--A-------GCA--A-A--CCCC-------------------A---------T-----T-----TC------------------T--GTCCAAGGAACAACATTCTG-AC---T-CGCGTCTGTCATATTCAT-CAGGTTA---TTT-TTT-TTATTCATTTCTTACAAAACATATATTGTTATATATCAGTAA-TAGACAAAACAACGGAAATTA----------CAAAAATGGCAAGAATATTTAA--TTACAGGATCa
gi|3 : agACTTTAAAATATA-A----------A-AAGT-------ACA-------------G---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTA-TACATCA-ACTGATAATA-CAAAA---------ATACCAATATATTCAACTTTAACCATCTAAGATTAAAAACAAATAT-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TA---AACT---------TTTTTTTGCCA---------ATTTT---------CGAA-A-TTGACATG------TTACAATA-ATTGTCCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATATCATCCTT-TTAAAACATCAGCTGACAAT------G-TAAAAATACTAATACATCAATCTT--TCACCGTCT-------------AAA-AC--T---------T---A--CAAT-A--TT---GTACCCCT----AC-----CAAATT-T-CGGA-TTTTTGCAAATTTTGACAA--TTTAATAGGGTGTTA------T-GTTTCAATTA-G-------TTAGCCTGATATCAAACCTGATATCGAGTACT---AGG------TACAGCAGACCAAGCAAATGA-TCCTTCTTACT-------TTAT------------CTTACTTCTA----AAAA---------AA---CTAATTTTTGGTTTACATCAGCCA----ATGT---G----TGC-C-------TGCCATTTTTCAGTATTTAGTCTATTCACAA-------ACACATTAC-CAA-C-AAGTCCCTTTTTTCT-TTTCCTACC--AACACAATTTAA--ATAT---CACTAGAAAGGGGCATA-AGCAACATTTATGCAT-TGTAAGA--CTGGAATTTGGAAAAGCAAC------G------------TTTC-TCC-GA-CCA-CTCTGAGCTGTCT-AACATGAAGTTTCTACATTTCAAACCAGATTAAGGTAATC--AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACCACAGG----------------------C---------------------AT--C-----------------------A-----------------------CAGTG-----------------------ATCAA---------T-T-AAGTC-ATGCAACCATAAAACTAAA-TG--GTACGAAA-------------AGCACGAATGATA---ATATTTT-A-------------T-------------AACACGTGTATAGAAAATT-----A---A----GTCTAAATCCTCTTGGACGCATGCTTTTTT----ATAAGAAAAG-C--CTCAGAA-AA--CAA---A-GCGTCCCTGGTGATCAAGAC-TGAAAAA--TCAGGAAAATTCCCAAGTTACGGACTTATCCGAAGTTATTC-GAT---T-TT-T-T-CCAATTTttactttaaaatataaaaagtacagtagaaaaagcacattaacttttttatacatcaactgataatacaaaaataccaatatattcaactttaaccatctaagattaaaaacaaatataatataatacccctacccccttttaaacttttttttgccaattttcgaaattgacatgttacaataattgtcctgacatcaaattataaaatataccatagaaaaagtatatcatccttttaaaacatcagctgacaatgtaaaaatactaatacatcaatctttcaccgtctaaaacttacaatattgtacccctaccaaatttcggatttttgcaaattttgacaatttaatagggtgttatgtttcaattagttagcctgatatcaaacctgatatcgagtactaggtacagcagaccaagcaaatgatccttcttactttatcttacttctaaaaaaactaatttttggtttacatcagccaatgtgtgcctgccatttttcagtatttagtctattcacaaacacattaccaacaagtcccttttttcttttcctaccaacacaatttaaatatcactagaaaggggcataagcaacatttatgcattgtaagactggaatttggaaaagcaacgtttctccgaccactctgagctgtctaacatgaagtttctacatttcaaaccagattaaggtaatcaaaacaggcaatcgtcattatcccacaatctttattctttaacaatatgaccacaggcatcacagtgatcaattaagtcatgcaaccataaaactaaatggtacgaaaagcacgaatgataatattttataacacgtgtatagaaaattaagtctaaatcctcttggacgcatgcttttttataagaaaagcctcagaaaacaaagcgtccctggtgatcaagactgaaaaatcaggaaaattcccaagttacggacttatccgaagttattcgattttttccaatttgtg
gi|30 : aggtattctatcaataatactcaatgttaaaaaactaaaaagactttttactttcattttccacattaaattctagattcaattccaaattttaggaacttttacccgtatatttcttcaattatagtgtattttataagcaaaccccatttctgtccaaggaacaacattctgactcgcgtctgtcatattcatcaggttattttttttattcatttcttacaaaacatatattgttatatatcagtaatagacaaaacaacggaaattacaaaaatggcaagaatatttaattacaggatctt---A----GTCTAGATCTTCTGCAGCGCTTG-ATTTTCAAGACTTAGAAAAA-AAATTAGAAA-AA--C-A---A-GCGTCCCTAATGATCgtg
gi|4 : ATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAAACACTTTTA-----T-TTT--CAACATTCAA---------TT-----CTGG-ATTTAATTCCAAATTTTTAGGAACTG---------------TTA------------------AA---GTAT---A-------------T---TT-TTCCGTT-T--G--G-------GGTGTA-A--TTTA-----------T-------AAGTATACCTC-----T-----TC------------------TCTGTCCAAAGTACTATATTCTG-TC---T-CAAGTCTGCTATATTCAT-TTGGTCAGGGTTT-TTT-T---TCGTTTCTTACAAAACATCTATTTTTATATTCTAGTAAGTAGACAAT-CAATGAAGATT-----------CGAATATGGCAATAATATTTTA--TTACAGGATCAG--AAAAA--AAAT-GTTTGTTAGATCTTCATATCCATAAATATC-ATAA---AACAGGCA-T-------TTTA--CTTGTC--AT--TTTAAAATATA-ACA-TATTGAAATTAATAATCCTGGCGTCAATTTCAAA--A---TG-----G----A---------------ACA------------GA--------------AG------------------AATATGTACTGTTTTTGCTACATTA-ACTGTTGATG-CAAAA---------ATACAAATATAATAAAAGTTTACCGTCTTAAATTAAAAACTAATAG-AAT--ATAA-TACCCCAA--C----CC------TCT-TT---TT---AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------T-------------CCTGACATCAGACTATAAAATATACCATA---GAAAAAGT-ATATCATCTTTCTTAAAACGTCAGTTGACAAT------G-TAAAAATACTAATATATCAAACTT--CTAAAACTTGAAA---------AAA-AA--A---------T---A--GAAT-A--TT---GTACCCCT----AC-----TTCATT-T-CGGC-TTTCCGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-CTTACAATTA-GCCTGATATCAACCTGATATCAAA------------TACT---AGGTAGATCTACAGGAGATCAATAGATTTA-TCTTTCTTACTATATACATTA-TA------TAGACTTTCT--TA----AAAA-A--A----AA---CTAATTTTGGGTTTACATCCGCCA----TTGT---G----TGT-C-------TGCCA------------------TTTTACATTTTTTTGTCAATTCACAA-A-C-AAATAC---TTTTTCATTT-C--CC-AAACACAATTTAA--GTGT---CACTGGAAAGGGACATACAGCAACATTTAGGCGT-AGTAAGA--CTGGAGTCGGGAAAGTCAAC------G------------ATTC-T-C-CAGCCA-CACTCAGT----------TGAACATTCAACATTTTATTCCAGATTACGGTTATCA-AAAACAGGCAATCGTC-A---TTTTCCCACAATCTTTA-TCCTTTAACAATATGACCATCGA----------------------C---------------------AT--A-----------------------A-----------------------CAGTAATTAAGTGATTCATGCAACCGTAA--AACATTGTGTTT-G-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ACCACGA------------------------------------------------TCGTGTGTAGAAAATT---AAA---A----GTCTAAATCATTTCCGta
gi|5 : TA--T----CC------CCT-TT---TT---GACT---------TTT----GACA---------ATTTTGCCTGTTTCCGAATACTT----TT------TTAAAATACATTGTCCTGACATCAAAT-----AACATACCATA---AAAAAGGT-ATATCATCTTTCTTATTACATCAGCTGTTAAT------G-TAAAAGTACTAATATATCAAACTT--TCACCATCT-------------AAA-AC--TTGAAAAAAAT---A--GAAT-A--TT---GTTCCCCT----A------CCAATT-T-CGGC-TTTTTGCCAATTTTGCCAAT-TTTC---GGGTTTCA------T-CTTACAA-TA---------------TGTTATCAAA------------TACT---AGG------TATAGCAGATCAAGTTAATTA-TCTTTCTTACTATATCAATT-TT------CTAGACATTCATCTT----AAAACA--AAAAAAA---ATACTTTTGGGTTTACATCCGCCATTTTATGTTCGACATTTGT-CAGTATTTTGTCA------------------ATTCACAT-------ATAAATAAC-C-A-C-GATTCCCTTTATT--ATTTCC--TC--AACACTATTTAA--ATGT---CACTTGAAAGGGCCATACAGCAACATATACATGT-AGTAAGA--CTGGAATCTGGAAAGTCAAC------G------------AATCTT-C-GA-CCA-CACTGAGCTGTCT-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AATACAGGCAATCGCC-A---TTATCCCACACTCTTTATTTTTTTAAAAATAAAACCACCGA----------------------C---------------------AT--AATAGTGATCAGTAAATTCAAGCAA-----------------------CCGTA-----------------------A--AATATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGATA-------------ATCACAAATGAAA---ATATTTTGG-------------T-------------AACTCGTGCGTAGAAAATT---AAA---A----GTCTAAATCATCTTCGGCGCAGGCTTTTTC----CGAAGAAAAT-C--CTAGGAATAG--C-A---A-GCATCCCACATGATCAAGAC-TAAAACA--TTAGGGTAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-TCT-TTGATGTCGTTATGGA
gi|6 : tttatattgtacagttccgctacggatgttacagaaattcgtttctcaaccacatttgtgtagcttagccaaccata------A--A---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTT-AATACATCC-ACTGATAATA-CAAAA---------TTACCAATATATTAAACATTTACCGTCTAAAATTAAAAACAAATAG-AAT--GTAA-TACCCCTA--C----CC------CCT-TT---TT---AACT---------TTT----GCCAGTTTTGCCAATTTT---------TGAATA-TTGACATG------TTACAATACGTTGTTCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATAT-----------------CAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCTTAAACTTAAAAA-AAA-AT--T---------T---A--GAAT-A--TT---GTTCCCCT----AC-----CCCATT-T-TGAC-TTTTTGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAG------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAGTTAC-A------TAGACTT-CTT-------AAAA-A--ACAACAA---CTAATTTTGG---TGTGTC----------TGT---A----T-T-T-------TGTCA------------------ATTCAAAT-------ACAAATTA----A-C-GAGTCCCTTTT--CCATTCCC--CCCAAACACAATTTAA--ATAT---CACTGGAGAGGGGTATACAGCAACATTTACACCT-AGTAAGA--CAGGAAT------------T------GGGAAAGTCAATGATTC-T-CCGA-CCA-TACTGAGCTGTCTTAACATGAAAGTTCTACATTTTAACCCAGATTATGGTTATCA-AAAACAGGCAGTTGTG-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACAACGGA----------------------C---------------------AT--AACTGATCAATTAAGTTATGAA--A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AATAATATTTATGCGCG-----AAA-TG--TCATGAAA-------------ATCACTAATGATA---ATATTTTTG-------------T-------------AACAGGTATGTAGAAAAAT---AAA---A----GTCTAAATCAACTTGGA-GTTTGCTTTTTA----ATAAGAAAAA-T--CTAAAAA-AAACC-A---A-GCGTCTCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCAAAGTTGCAGACTTATCTGAAGTTACTT-GATTTTT-TT-T-T-CCGAATTTGTTAtcgaata
gi|7 : GCAA-AATATTTGACTTTACAGA--CA---AAATATTAA-T-GCAT--CAAACTTT--TACTCTCTAAAATTTATAATTGAAAGAGTA-TAATACCCTTTCGACTTTTCGTAAATTTTTGAATATTTATA-CGTTACAA---GTTGTCCTGACATCAA------ATAA---TAAAAGGTCCCGA---------------A--------------AA--------------AG------------------TTTATAAACG-TCCTTAGTGTATCA-GCTGACAATGACACAA---------ATATTAATATGTTAGACTTTAAC--TCTAAATTTTAAAA-AAAT-G-AAT--GTGC-CACCGTTAATC----CCATTCGGCTT-TT---TTTCCAA-----------TTT----GACA---------ATTTTT--------CGAATG-GTAACATAGCGGTATCACAATATGTTGTCCTGGTATAAAAT-ATAAAAAAAAAGATACAGGAGAAATTTATATTAATTTTCTTTGTACATCCGCTGAAAAT------G-C-----TACTAATATATGAAAATT--TTACCGTCT-------------AAA-ATGATG--------T---A--TAAT-T--TA---GGATCATT----ACGTGATCCCTTTCT-CGGCTTTTTTGCCAA------------------------CA------C-GTTACAGTTA-A-------TTATTCTTAAATCAAA------------TAAA---AGA------TAAAGTAAAgg
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatAAA---------ATATTAATGCATCAAACTTTTACTCTCTAAAATTTATAATTGAAAG-AGT--ATAA-TACCC-----------------------T---TTC--GACT---------TTTC---GTAA---------ATTTT---------TGAATA-TTTATACG------TTACAA---GTTGTCCTGACATCAAATAATAAAAGGTCCC------GAAAAAGT-TTATAAACGTCCTTAGTGTATCAGCTGACAAT------GACACAAATATTAATATGTTAGACTT--TAAC--TCT-------------AAA-TT--T---------TAAAA--AAATGA--AT---GTGCCACCGTTAAT-----CCCA-T-T-CGGCTTTTTTTCCAA-TTTGACAATTTTTCGAATGGTAACATAGCGGT-ATCACAATAT-G-------TTGTCCTGGTATAAAA------------TAaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacAACATA-GCGGTATCACAATATGTTGTCCTGGTAT-AA------A--A---TA-----T----A---------------A--------------AA--------------AAAAAGATACAGGAGAAATTTATATTAATT-TTCTTTGTACATCC-GCTGAAAATG-C--------------TACTAATATATGAAAATTTTACCGTCTAAAATGATG------TAT-AAT--TTAG-GATCATTA--CGTGATC------CCT-TT---CTC--GGCT---------TTTTT--GCCA---------A------------------------CACG------TTACAGTTAATTATTCTTAAATCAAAT---AAAAGATAAAGTA---AAAATGGT-GTATTCATTTTCTTTGTGGAACAGCTGAAAAT------T-CTAAAATATTAAAACGTTATACTT--TTACCATTT-------------AAA-ATG-T---------T---AACAAAT-AGGGTAAAGTACCTCT----A------CCCATT-TGTGGCTTTTTTGCAAAT----------TTTCGAATGGTAGCG------T-GTTACAATAA-G-------TTACCCTtaaaaaaaaagatacaggagaaatttatattaattttctttgtacatccgctgaaaatgctactaatatatgaaaattttaccgtctaaaatgatgtataatttaggatcattacgtgatccctttctcggcttttttgccaacacgttacagttaattattcttaaatcaaataaaagataaagtaaaaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|8 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacaaaatattaatgcatcaaacttttactctctaaaatttataattgaaagagtataataccctttcgacttttcgtaaatttttgaatatttatacgttacaagttgtcctgacatcaaataataaaaggtcccgaaaaagtttataaacgtccttagtgtatcagctgacaatgacacaaatattaatatgttagactttaactctaaattttaaaaaaatgaatgtgccaccgttaatcccattcggctttttttccaatttgacaatttttcgaatggtTTA-----T-TTT--CA----T------------AA-----CCGACATT-------CAATTTT--CGA-------------------TTA------------------CA---TTCC---A-------------A---AT-CT----A-T--ACCG-------T----ATATTCTTT-----------T-----------------CGTG--T-----TTGCC---------------T--GTCCAAAGTGCAATACACCGCACGGATAAAAGCCCTCTATGTTCATGTTGG-TA---TTT-TTTGT-AAACATTTCTAACAAGTCGTATTTTGTTACATACAAGTTCGTAGCCAAAACATCGACTATTA----------CAATTA-GAAAATAATATTACA--AAACAGAAATAT--AAAAA--CA-T-GTATGATAGATTTTCATGTTCAATAACATC-ATTA---AATGG-------------TAA--CTTG--------------------------TTGTAGCAAGTAATCCTGGTAT--A------A--A---CA-----T----T---------------A--------------AA--------------AGT-----------------CACA--AA-----TTAAAAAAAACACATTAATAATG-CAAAG---------ATACTAACACGACACATTTTCGGCGTCTCCACTT-----TAATTAG-AATAAATAA-TAATCTT--------------------------------CC---------TTC----ACC----------ATTTT---------CGAACA-TT-ATATA------TAACAA-AAGTTATCCTGACATCAAGTAATAAAATGTACCCTA---GAAATTGT-TTATTAACTATCTTAGTAAATCATCTGAAAAT------G-TAAAAACAGTAATACATCAAACTG--GTACCATCT-------------AAA-AT--G---------T---A--tgcat
gi|9 : cCCATCCATAACA-------------AAC-TAAGA-AAA-C-TTTTTA-----C-TTT--CA---TTGTTCACATTAAATT-----CTGG-ATT-------AAATCCC--AAA-------------------TTTTTAGG-------------AACTTTTACTGTA-------------T---AT-TT----T-TTCA--GTTTTGGTG----T-A--TTTTATATGTATACAT-------A---------T-----C-----TT------------------T--GTCCTAAGTATAATATTTTG-AC---A-GAAGTCTGCCATATTCAG-TTGGTTA---TTT-TTT-T-ATTCATTCCTAATAAAACATCTGTTGTTATATATAAGTAAGCAGACAAAACATTGGAAATTA----------CAAATATGGCAAGAATATTTAA--TTACAGGATCAGA-AAAAA--AA-T-GTTTGTTAGATCTTCATATTCATTAATAGT-ATAA---AATAGGCATT-------TTTT--CTTGTC---C-TTTTAAAATATA-ATA-TATTGCAATACGTAATCCTGACATCAA------A--A---TA-----T----AAAACGTACAGTAGAAA--------------AA--------------AG------------------CATGTTAACT-TTTTTAATACATCA-ATTGATAATG-TAAAA---------GTACTAATATATTTAACTTTTACCGTCTAAAATTAAAAACAAATAGAAAA--ATAA-TACCCTTA--C----CC------CC--TT---TTT--AA-T---------TTT----GCCA---------ATTTA---------CGAATA-TTTACATG------TTACAATATGTTGTCCTGACATCAAATTATAAAATATACCATA---Gttgaaatgtaaattacaactgcttcatatttcatctgaccttcttgttttcatctcagtaaaacgctctgtctggactacagtcactgctatcaaacagatgtc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|31 ): TATTGAACAGATCTGCCACGAACGTTGAGGACTGACATCGTTTCTCACCACATTTGTGTAATCTGGCCAACCGTAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 111111 1111111111 11 1111111 2222222 77777777777777777777777777777777777777777777777777777777777777777777777777777 111111111 111111111111111 1111111111111111 1111 111111111 111111111 111111 4444444444444 22222222222222222 1 22222222222222 111111 111111111 222222222222 111111 555555555 11111 1111 1111 22222222222222222222 333333333333333333 1111111 11 11 11111111111111111111111111111111 111 111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11111 1 2222222222222 444444444444444444444444444 1111 11 111111 11 1111 111
lowQualScore : 7 3 0000 8888888 44 555 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 55 4 111111 0 4 777 4 555 1 1 1 0 9999999999 5 0 55 00 66 4 4 1 77 777 4 4444444 777 8888888 3 1 3 1 5 3 999999 44 555 22222222222222222222222222222222222222222222222222222222222222222222222222222 3 1 4 4 444444444 0 3 55 3 0 222222222222222 66 555 6666666666666666 6666 444444444 888888888 1 3 9 000000 2 6 7 1 555 55 2 22 1 888888 3 44 0 3333333333333 3 00000000000000000 44 3 55 666 7777 999999 4 4 2 0 00000000000000 44 111111 4 222222222 2 000000000000 777 222222 0 0 5 0 0 111111111 2 0 00000 4444 2 888 0 2222 33333333333333333333 1 666666666666666666 6666666 1 888 5 5 1 00 1 4 77 66 0 66 2 888 1 4 55 0 99999999999999999999999999999999 4 222 4 4 44 2 1 4 4 333 66 66 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 55 4 4 00000 2 55 2222222222222 1 2 7777 000000000000000000000000000 0000 666 7777 1 55 0 00 888888 999999 22 3 44 3 555 3 3 4 1 6666 3 9999 3 3 111
lowQualScore : . . .... ....... .. ... ........................................................................................................................................................................................................................ .. . ...... . . ... . ... . . . . .......... . . .. .. .. . . . .. ... . ....... ... ....... . . . . . . ...... .. ... ............................................................................. . . . . ......... . . .. . . ............... .. ... ................ .... ......... ......... . . . ...... . . . . ... .. . .. . ...... . .. . ............. . ................. .. . .. ... .... ...... . . . . .............. .. ...... . ......... . ............ ... ...... . . . . . ......... . . ..... .... . ... . .... .................... . .................. ....... . ... . . . .. . . .. .. . .. . ... . . .. . ................................ . ... . . .. . . . . ... .. .. . ............................................................................................................................ .. . . ..... . .. ............. . . .... ........................... .... ... .... . .. . .. ...... ...... .. . .. . ... . . . . .... . .... . . ...
lowQualScore : 3 6 3333 4444444 66 888 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 55 0 444444 8 0 000 0 444 2 1 0 7 4444444444 0 7 55 66 11 4 4 9 11 888 4 4444444 111 8888888 6 2 6 3 8 6 666666 66 888 77777777777777777777777777777777777777777777777777777777777777777777777777777 6 3 0 0 555555555 2 6 00 6 4 777777777777777 55 888 8888888888888888 4444 555555555 222222222 4 6 5 555555 1 5 6 0 444 22 2 44 6 888888 1 22 5 5555555555555 1 66666666666666666 22 6 00 444 7777 666666 0 0 0 8 33333333333333 33 555555 0 444444444 8 555555555555 888 888888 5 2 0 2 4 222222222 2 4 99999 0000 5 888 7 1111 44444444444444444444 0 999999999999999999 2222222 0 666 7 7 4 33 7 3 99 99 8 99 2 888 0 0 55 9 77777777777777777777777777777777 0 555 0 0 55 1 9 4 4 999 44 22 7 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 55 0 0 00000 0 55 0000000000000 6 4 7777 000000000000000000000000000 4444 444 7777 0 77 1 88 888888 111111 88 3 66 3 888 3 3 5 0 5555 6 1111 6 6 555
consensus : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTTTA-----T-TTT--CA---TT------------TT-----CCGG-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TTNC---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
Reference ( family-341 ) : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTTTA-----T-TTT--CA---TT------------TT-----CCGG-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TTNC---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
gi|1 : ATTCCATTCATTATACTCAGTGTTGAAAAAC-TAAAA-ACT-C-TTTTTACTGTCT-TTTAACA---CT------------TTAAATTCTGA-ATTCAATCCTAAATTTTTAGGAAC-----------------TTT------------------TA---TCGT---A-------------T---AT-TT----T-T--T--T-------C----A-A--TTTTGGTT-------T-------A---------T-----T-----TTACAAGTATACCCCCTCTGT--GTGTAAGGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCGT-TT--TT----TTT-TTT-T-ATTAATTTCTTACAAAACATCTTTTCTTATATACTAGTAAGTAGGCAAAACATTGGAGATTATAACAAAATACAAATACGGCACGAATATTCTA--TTTTATAATCAG--AAAAA--AA-T-ATA-----GATCGTCATATGCATTAATAT----AA---AATGGGCA-T-------TTTA--TTTGTC--AC--TTTAAA-TATG-ACA-TATTGTAATAC----TCCTGACATCAA------A--A---TA-----T----A---------------A--------------AAGGTACAGTAGAGAAAG------------------CACATTAACT-GTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATCAAACTTATACCGTCAAAAATTAAAAACAAATAG-AAT--ATTA-TACCACTA--C----AA------CC--GT---TTT--GACTTTTGCCAAATTT----GCCA---------ATTTT---------CGAAAT-TTAACATG------TTACAATACGTCGCCCTGACATCAAACTATAAAATATACCACA---GAAAAAGT--CATCATCTTTCCTAATACATCAGCTGAAAAT------G-TGACAATATTTATACATCAAAGTTCATCA-CATTG-------------AAACAA--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-TGGC-TTTTTGTCAGTTTT-----------GAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTTTTATCAAT------------TACT---AGG------TATGGCAGA--------------CCTTCATACTATATCAGTTA-TA------TAAACTTTCTTCTGAAAAAAAA-A--ACAACAACATCTAGTGTTTGGTTTACATCCGCCA----ATGT---A----TATAA-------AAACA------------------ATTCAAAT-------TCA
gi|1 : AAAACAATTCAA--AT-T---CACTGGAAAGAGACATACAGTAATATTTACACAT-AGTAAGA--CTGGAAT------------CTAGAAAGTCAAAC------ACTC-T-CCGA-CCA-TACTGACCTGTCT-AACATGATTG------ATTTTAA--------------A-CA-AAAACAGGAAATCGTC-A---TTAT---ACAATCTGTA-TTCTTTTAAAATATGACCACCGA----------------------CGAAACAGTGATCAATTAATTCATGCA-----------------------A-----------------------CCGTT-----------------------A--AACATTGTGGTT-T-TAGACGATTTATTCGTG-----AAA-TG--TCATGAAA-------------ATCACGAATGATA---CAATTTTGA-------------A-------------AACTGGTGTGAAGAAAATT---AAA---A----GTCTTAATCATTTTCAACGCTTG-ATTTTT----TTAATAAAAT-A--CTAAGAA-AAG-C-A---A-GCGTCCCAGATGATCAAGGCTTAAAACA--T-AGGGAATTTTCCAAGTTACGAACGTGTCCGAAGTTACCCTG-------TT-T-T-CCGATTTAATCATAGActggaaagagacatacagtaatatttacacatagtaagactggaatctagaaagtcaaacactctccgaccatactgacctgtctaacatgattgattttaaacaaaaacaggaaatcgtcattatacaatctgtattcttttaaaatatgaccaccgacgaaacagtgatcaattaattcatgcaaccgttaaacattgtggttttagacgatttattcgtgaaatgtcatgaaaatcacgaatgatacaattttgaaaactggtgtgaagaaaattaaaagtcttaatcattttcaacgcttgatttttttaataaaatactaagaaaagcaagcgtcccagatgatcaaggcttaaaacatagggaattttccaagttacgaacgtgtccgaagttaccctgttttccgatttaatcatagacgaaa
gi|10 : attccattcattatactcagtgttgaaaaactaaaaactctttttactgtcttttaacactttaaattctgaattcaatcctaaatttttaggaacttttatcgtatatttttttcaattttggtttattttacaagtataccccctctgtgtgtaaggtacaatattctgactcaagtcttccatattcgttttttttttttattaatttcttacaaaacatcttttcttatatactagtaagtaggcaaaacattggagattataacaaaatacaaatacggcacgaatattctattttataatcagaaaaaaatatagatcgtcatatgcattaatataaaatgggcattttatttgtcactttaaatatgacatattgtaatactcctgacatcaaaatataaaaggtacagtagagaaagcacattaactgttttaatacatcaactgataatgcaaaaataccaatatatcaaacttataccgtcaaaaattaaaaacaaatagaatattataccactacaaccgttttgacttttgccaaatttgccaattttcgaaatttaacatgttacaatacgtcgccctgacatcaaactataaaatataccacagaaaaagtcatcatctttcctaatacatcagctgaaaatgtgacaatatttatacatcaaagttcatcacattgaaacaattagaatattgtacccctaccccattttggctttttgtcagttttgaagggtttcatgttacaattagttagccttttatcaattactaggtatggcagaccttcatactatatcagttatataaactttcttctgaaaaaaaaaacaacaacatctagtgtttggtttacatccgccaatgtatataGTATTCAATCCATAATACTCAATGTTTAAAA-C-TAAAA-AAG-G-TTTT-A-----T-TT---CA---TT------------TT-----CCAC-ATT-------AAATTCT--GGA-------------------TTCAATCCCAAAGTTGTAGGAAA---TTTC---ACCGGATATTGTTTA---ATGTT----T-T--A--T-------G----T-A--TTTT-----------TCAAGTATA---------C-----TCCCTCTC------------------T--GTCCAAAGTACAATATTCTT-AC---T-TAAATCTTCCATATTGAT-TTAGTTA---TTTGTTT-T-AACCATTTCTTACAAAACATCTAGTGTTATATACTAGTAGGTAGACAAAACATCGGAGATTA----------CAAATATGGCAATAATATTTCA--TAACAGGTTCAGAAAAAAA--AA-T-GTATGTTAGATCTTCATTTTCATTAATATT-ATAA---AATGGGCA-T-------TTAA--CATGT----CACTTTGAATTACA-ACA-TATTGCAATAAGTAATCCTGACATCAA------A--A---TA-----T----A---------------AAAGGTACAGTTGACAA--------------AG------------------CACACTAAC--GTTTTAATACATTA-ACTGTTAATG-CAAAATACAAAAATGTACCAATATAGTAAACATTTACCGTCTAAAATTAAAAACAAACAC-AAT--ATAATTACCCCTA--C----CA------CCTATTAAGTTT--AAcgaaa
gi|11 : ACAT-------AGAAATAAC-C-A-T-GAACATCTTGTT--CTTTTCC--CC-GAACACTCTTTAATTATGT---CAATGAAACGGGCCAAACGGCAATATTTTCACGT-AGTAAGA--C-------------------------G------------AGTA-T-C-AG-CC----------TGTCC-AAAATGAACGTTCTACATGCTTACCCGTGTGTAGGTTATTA-ACA-CATTTAATCGTCCACC-TTA---CACAATCCTTC-TCCTTTAAAAACATGACCACCGA----------------------C---------------------AT--A-----------------------ACAGTTATTAGTAAACACACACTACCTTA-----------------------A--AACATTGTTTTTCT-AAGACGATTTATTCGTG-----AAACTG--TCATGACA-------------ATCAC-AATAACAGCCATATTTTGGTTTTCACGGGAGAT-------------AACTC-T-TGCCGAAAATTGGGAGA---A----GTCTTTATCATTTacatatttattttataattt
gi|11 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaCATTTCAGATATTCAAGAC-T---------TAGCGGAATTCACAAGTTACGGATTTAACCGAGGTTACCC-GA----T-TT-T-TACCGATATCGTTcagatattcaagacttagcggaattcacaagttacggatttaaccgaggttacccgatttttaccgatatcgttctacatagaatagctttaa
gi|12 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaacatagaaataaccatgaacatcttgttcttttccccgaacactctttaattatgtcaatgaaacgggccaaacggcaatattttcacgtagtaagacgagtatcagcctgtccaaaatgaacgttctacatgcttacccgtgtgtaggttattaacacatttaatcgtccaccttacacaatccttctcctttaaaaacatgaccaccgacataacagttattagtaaacacacactaccttaaaacattgtttttctaagacgatttattcgtgaaactgtcatgacaatcacaataacagccatattttggttttcacgggagataactcttgccgaaaattgggagaagtctttatATGTTTAAAAAC-TAAAA-CGA-C-TTTTTA-----C-CTT--CA---TT------------TT-----CAAC-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TCCC---A-------------A---TT-TT----T-T--A--G-------G----A-A--GTTT-----------T-------A---------C-----ctacatagaatagctttaa
gi|12 : ccTT-----------T-------C---------C-----T-----CTC-----------------T--GTCCAAAGTACAGTATTATA-AC---T-CA--TCTACCATATTCAT-CTGGTTA---GTT-TTT-C-ATTCATTTCTTACAAAACATCTATTTCAATATACAAATAAGTAGACAAAACATTCGAAATTA----------CAAATATGACAAGAATATTTCC--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATT-ATGA---AATTGGCA-T-------TTTA--CCTCT----CACTTTAAAATATA-ATA-TATTGCAATAAGTAATTCTGACGTCAA------A--A---TA-----T----cgtatactttttcagttttggtgtattttataagcatattaatttcctctctgtccaaagtacagtattataactcatctaccatattcatctggttagtttttcattcatttcttacaaaacatctatttcaatatacaaataagtagacaaaacattcgaaattacaaatatgacaagaatatttccttacaggatcagaaaaaaatgtatgttagatcttcatattcattaatattatgaaattggcattttacctctcactttaaaatataatatattgcaataagtaattctgacgtcaaaatattga
gi|13 : ccatgtttaaaaactaaaacgactttttaccttcattttcaacattaaattctggattcaatcccaattttttaggaagttttaccgtatactttttcagttttggtgtattttataagcatattaaTATTCCATGTATAATACTCACTATTTATAAAC-TGAAATAAA-C-TTT---------------CA---TT------------CT-----CCAG-ATT-------TAACTCT--ACA-------------------TTT------------------AA---CTAC---A-------------A---AT-TT----T----A--G-------G----A-A--CGTT-----------T-------A---------CCGTATT-----TTATC---------------T--GTCCAAAGTACAACAAACTG-AA---A-GAAGCCTTCTATATTCAG-ATGGTTA---TTT-GTT---ATCCATTAATTAAAAATCATCTATTGTTATA--CCAGTAACTAATCAAAACATTGGAGATTA----------CAGATATGACAATAATACATCA--TTACAGGATCAG-----AA--AA-T-GTTTGGTAAACCTTCTTATTCAATAACATC-ATCA---AGTG---A-T-------TTTT--CTCGT----CACTTTAAAATGTA-ACA-TGTTGCATTAAGTTAATCTGACATAAA------A--AAGGTA----------G---------------A--------------GA--------------AG------------------AAAATTCACT-TTtga
gi|14 : ------G------------ATTA-T-CCGA-CCA-CACTGAACTGTCT-AACATGAACGTTTTACATTTTAACCAAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTACCCCACAATCTTT---TCTTTAAAAATATGCCTACCGAAATAAACAGTGGTAATTTAATTC---------------------ATGCA-----------------------A-----------------------CTGTG-----------------------A--AATATTGCGTTT-T-AAGTCGATTTATTCGTG-----AAA-TA--TCACGGAA-------------ATCACGTTTGATA---ATATTTTGG-------------T-------------AACTCATGTTTAGAAAATT---TAA---A----GTCTAAATCA------GTGCTTGCCTTTTT----CCAAGAAAAA-C--CT------------A---A-GCGTCATAGATGATCAAGAC-TAAAAAA--Taa
gi|15 : ctaggaattgaaaagtcaagACATCAACAAACAGTCCAATTA-TGAAATTATT--TATATTAAGCTT--TTACCAACTGACATTCATAAAAAAA-AT--T---------A---A--GAAT-A--TA---GTACCCCT----AC-----C--------------------CAATTT--AC------------GGTT-CA------TTGCCAAAATCAAG-------TCTTTCTGATATCAAG------------AACTGAAAGG------TACAAAAGATCAAGCAATTTAATC--TCTTACTTTTTCAATTATT-------TACACTTTCTACTG----AAAA-AGCACACCAA---CTAAGTTTGGGTTTACATCCGCCA----ATGT---A----TGT-T-------TGATA------------------ATTaga
gi|16 : ATAAACAC--A----------------------C---------------------AC--G-----------------------A-----------------------CCTTA-----------------------A--AGCATTGTGTTT-TGAAGAGGATTTCTTTGTG-----AAACTGAATCACGAAA-------------GGCA------ATC---ATATTTGGG-------------TCATCACGGGAGATAATTTGTGTCTA-AAAATT---AATCTTA----GTTTTAATCAT-TTCAACACTT---TTTT-------------AT-C-----------A--C-AGTTA-GCTTCGAAGATAATCAATAC-T---------TAGGGGAAATCCCAAGTAACAGACTTATCTGAAATTACCC-TG----T-TT-T-TGCTGATTTCATTATgtcaattatggctgtctattata
gi|17 : aaaagtgatcaA----------------------C---------------------GT--G-----------------------A-----------------------CCTTA-----------------------A--AACACTGTGTTT-A-AAGACGATTTATTCGTG-----AAACTG--TTACGAAGCTATATTTCGGTCATCACGGGCGGGA----------GG-------------T-------------AACTCGTGTC--GAAAA-----AAA---ATGTAGTCTTAATCA---------------TTTTC-------------T-C-------AA-AG--C-A---A-GCGTCGCAGATAATCAATAT-T---------CAAGGGAAGTACCAAGTTACGGACGCATCCGAAGTCACCA-GA----TATA-T-A-CCGGTTTCGTTATGGAacatggaatacc
gi|18 : aaacgcGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTTTA-----T-TTT--CA---TT------------TC-----TC--------------AATCCG--GCA-------------------TTC------------------AA---TCAC---A-------------AC--AT-TT----T-T--tggaatac
gi|19 : atttgtatttacctttaaaGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTTTA-----T-TTT--CA---TT------------TC-----TC--------------AATCCG--GCA-------------------TTC------------------AA---TCAC---A-------------AC--AT-TT----T-T--ttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|2 : atttgtatttacctttaaaGTATTCCATCCATAACACTCAATGTTTAAAA-C-TAAAA-AAA-A------A-----TATTT--CA---TT------------GT-----CCAC-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TCCG---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTTCAATATTCTG-AC---T-AGAGTCTTCCGTATTCAT-TCGGTTG---TTT-CTT-T-AATCATTTCTTATAAAACATCTATTTTTGTATACTAGTAAGTAGACAAAACATTGGAAATTA----------TAAATATGGCAAGACTATTTCA--TTACAGGATCAG--AAAAA--AA-TTGTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTC--CTTGTC--ACACTTTATAATATA-ACA-TGTTGTAATAAGTTATTCAGACTTCAA------A--A---TA-----T----A---------------A--------------AA--------------TG------------------CACATTAACT-TTTTTAATACATCA-ACTGAAGATG-GAAAA---------ATACCAATATATCCAACTCTTATCGTCTAAAATTAAGAGCAAATAT-AAT--ACAA-TACCTCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATT------CTACAATACGTTGACCCGACATCGAATTATAAAAAATACCACA---GAAAAAGT-ATATTATTTTTCTTATTACATCAGCTGACAAT------G-TAAAGATACTAATATATCGAGTTT--TTACCATCT-------------AAA-AC--T---------T---A--GAAT-A--TT---GTACCCTT----AC-----CCCATT-T-CGAT-TTTTTGCCATTTTTGACCA--TTTTAAAGGGTTTCA------T-GTTGCAAGTA-G-------TTAGTCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TGCGTCTTACTATATCAATTATTAATTATCTAGACTTCCTTCTG----AAAA-AT-ACAACAA---CTAGTTTTGGGTTTACTTACGCCA----ATGT---A----TGT-C-------TGGCA------------------ATTCACAT-------GCAAATTAC-C-ACC-GAGTCCCTTTTTTTCATTTCT--CC-AAACACAATTTAA--ATGT---CACTTGAAAGGGACATACAGCAACATATACATGT-AGTAAAA--CTGG--C------------C------G------------ATTC-T-C-GA-TCA-CATCGAGCTGTCC-AACATGAACGTTCTATATTTTAACCCAGATAAAGGTTATCA-AGAACAT----TCGTC-A---TTATTCCATAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------AGTACGAATGTTA---ATAACTTGG-------------T-------------AACTCGTATGTAGAAAATT-----A---A----GTGTGAATCATCTTCGACGATTGCATTTTC----CTAAGAAAAC-C--CTATGAA-AA--C-A---A-GCATCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCTAATTTACGGGCTTACCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGAttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|20 : TTCATCCTTAATACATAACGTTTGAAAAC-TGTAA-AAA-C-ATCTTA-----T-TTT--CA---TT------------TT-----TCAA-AAT-------AACTTCT--GGA-------------------TTC------------------AA---TTCC---A-------------A---TT-TT----T-T--A--G-------G----A-A--CTTC-----------T-------C---------C-----C-----TT------------------a
gi|20 : a-----TC------------------T--ATTCAACGTACAATAAAAGG-AC---A-CAAGTCTTCCATATTCAG-TTGATTA---TCT-TTT-T-ATTAATTTCTatatttgttctgttttggtatactttataagtatatctcctctctattcaacgtacaataaaaggacacaagtcttccatattcagttgattatctttttattaatttct
gi|21 : attcatccttaatacataacgtttgaaaactgtaaaaacatcttattttcatttttcaaaataacttctggattcaattccaattttttaggaacttctcccttatatttgttctgttttggtatactttataagtatatctcctcACATGT-AGTAAGAGTTTGGAAA------------A------G-----------------T-A-AA-TCATCAGT---CTGTCC-AAAATGAACGTTCTACATTTTAACCAATGTTTTGGTTA--ATAAAATGGGCACTTGTC-AACCTTA---CACAATACCTC-TCCTTTAACAACATTGCCACCAA----------------------C---------------------AT--A-----------------------A-----------------------
gi|22 : aatacaattcaagataactctaaataccaCA------------------ATTCACAT-------ACAAATAAC-C-A-CTGAGTCCC--TTTTACATTT-C--CC-GAACGCTATTAAG--ATATGTCCAC-GGAAAAGACCAAACGTCAACATTTACATGTCGGTAAAA--CGGGaagttattattaaacacacacaacaaac
gi|23 : tttttttcttaattgtcagagttttctGACAT-AAATTATAAAGCATACCATA---GTAAAAGT-ATATTACGTTTCTTAATGCATCAGCTGACAAT------G-TAAACATATTAAAACGTCAAACTT--TCACCTTCG-------------AAA-AT--T---------TGA-A--GAAtccctagatccgcctatac
gi|24 : ataacgtttatctgcaataagAAAAGGACATGTAGCAACATTTACACGT-AGTAAGA--CTGGAAC------------C------GGGAAAGTCAACAATTC-TTC-AA-CCA-CACTGAGTTGTCC-AACATGAACATTCTACATTTTAACTCAGACTaa
gi|25 : GATAAG-T--CTAAGAA-AAG-C-G---A-GCGTTCCAGATGATCAAGTC-TAAAAAAAAT-AGGGGAGTTTCCAAGTCACGGACTTATCCGAAGTTGCCC-GATTTTT-TT-T-T-CTGATTTCGTTATGGAttattctataaaaat
gi|26 : TAAGAAAAGGC--TTAAGAA-AAG-C-A---A-GCGTCCAAGATGATCAAGAC-TAAACAA--TTACGGTAATTCCCAAGTTACTGACTTATCCGAAGTTATCC-GT----T-TTAT-G-TCTATTTCAATATGcagaat
gi|27 : AAGAA-AA--C-A---AAGCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGTAATTCCCATGTTTCGAACTTATCCGAAGTTACTC-GA----T-TT-TCC-CCGATTTCGTTATGGA
gi|28 : acTACCATA---GAAAAATT-GTGTTGAATTACTCAGTGCATCAGCTGACAAA------G-CAAAAATACTGATTCACCA----T--TTAAAATTTGG-----------AAA-AA--T---------T---A--AAAT-G--TA---GTACCCCA----AC-----CCcgg
gi|29 : g-------TTGGCCTGATATCAAA------------TACT---TCG------TACAGCAGATCAAGCAAATAA-TCCTTCTTACTATATCAATTAT-------CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CAAA
gi|3 : tggtttcatGTATTCTATCAATAATACTCAATGTTAAAAAAC-TAAAA-AGA-C-TTTTTA-----C-TTT--CA---TTTTCCACATTAAATT-----CTAG-ATTCAATTCCAAATTTTA-GGAACTTTTACCCGTATATTTCTTC------------------AA---TTAT---A-------------GTGTAT-TT----TAT--A--A-------GCA--A-A--CCCC-------------------A---------T-----T-----TC------------------T--GTCCAAGGAACAACATTCTG-AC---T-CGCGTCTGTCATATTCAT-CAGGTTA---TTT-TTT-TTATTCATTTCTTACAAAACATATATTGTTATATATCAGTAA-TAGACAAAACAACGGAAATTA----------CAAAAATGGCAAGAATATTTAA--TTACAGGATCa
gi|3 : agACTTTAAAATATA-A----------A-AAGT-------ACA-------------G---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTA-TACATCA-ACTGATAATA-CAAAA---------ATACCAATATATTCAACTTTAACCATCTAAGATTAAAAACAAATAT-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TA---AACT---------TTTTTTTGCCA---------ATTTT---------CGAA-A-TTGACATG------TTACAATA-ATTGTCCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATATCATCCTT-TTAAAACATCAGCTGACAAT------G-TAAAAATACTAATACATCAATCTT--TCACCGTCT-------------AAA-AC--T---------T---A--CAAT-A--TT---GTACCCCT----AC-----CAAATT-T-CGGA-TTTTTGCAAATTTTGACAA--TTTAATAGGGTGTTA------T-GTTTCAATTA-G-------TTAGCCTGATATCAAACCTGATATCGAGTACT---AGG------TACAGCAGACCAAGCAAATGA-TCCTTCTTACT-------TTAT------------CTTACTTCTA----AAAA---------AA---CTAATTTTTGGTTTACATCAGCCA----ATGT---G----TGC-C-------TGCCATTTTTCAGTATTTAGTCTATTCACAA-------ACACATTAC-CAA-C-AAGTCCCTTTTTTCT-TTTCCTACC--AACACAATTTAA--ATAT---CACTAGAAAGGGGCATA-AGCAACATTTATGCAT-TGTAAGA--CTGGAATTTGGAAAAGCAAC------G------------TTTC-TCC-GA-CCA-CTCTGAGCTGTCT-AACATGAAGTTTCTACATTTCAAACCAGATTAAGGTAATC--AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACCACAGG----------------------C---------------------AT--C-----------------------A-----------------------CAGTG-----------------------ATCAA---------T-T-AAGTC-ATGCAACCATAAAACTAAA-TG--GTACGAAA-------------AGCACGAATGATA---ATATTTT-A-------------T-------------AACACGTGTATAGAAAATT-----A---A----GTCTAAATCCTCTTGGACGCATGCTTTTTT----ATAAGAAAAG-C--CTCAGAA-AA--CAA---A-GCGTCCCTGGTGATCAAGAC-TGAAAAA--TCAGGAAAATTCCCAAGTTACGGACTTATCCGAAGTTATTC-GAT---T-TT-T-T-CCAATTTttactttaaaatataaaaagtacagtagaaaaagcacattaacttttttatacatcaactgataatacaaaaataccaatatattcaactttaaccatctaagattaaaaacaaatataatataatacccctacccccttttaaacttttttttgccaattttcgaaattgacatgttacaataattgtcctgacatcaaattataaaatataccatagaaaaagtatatcatccttttaaaacatcagctgacaatgtaaaaatactaatacatcaatctttcaccgtctaaaacttacaatattgtacccctaccaaatttcggatttttgcaaattttgacaatttaatagggtgttatgtttcaattagttagcctgatatcaaacctgatatcgagtactaggtacagcagaccaagcaaatgatccttcttactttatcttacttctaaaaaaactaatttttggtttacatcagccaatgtgtgcctgccatttttcagtatttagtctattcacaaacacattaccaacaagtcccttttttcttttcctaccaacacaatttaaatatcactagaaaggggcataagcaacatttatgcattgtaagactggaatttggaaaagcaacgtttctccgaccactctgagctgtctaacatgaagtttctacatttcaaaccagattaaggtaatcaaaacaggcaatcgtcattatcccacaatctttattctttaacaatatgaccacaggcatcacagtgatcaattaagtcatgcaaccataaaactaaatggtacgaaaagcacgaatgataatattttataacacgtgtatagaaaattaagtctaaatcctcttggacgcatgcttttttataagaaaagcctcagaaaacaaagcgtccctggtgatcaagactgaaaaatcaggaaaattcccaagttacggacttatccgaagttattcgattttttccaatttgtg
gi|30 : aggtattctatcaataatactcaatgttaaaaaactaaaaagactttttactttcattttccacattaaattctagattcaattccaaattttaggaacttttacccgtatatttcttcaattatagtgtattttataagcaaaccccatttctgtccaaggaacaacattctgactcgcgtctgtcatattcatcaggttattttttttattcatttcttacaaaacatatattgttatatatcagtaatagacaaaacaacggaaattacaaaaatggcaagaatatttaattacaggatctt---A----GTCTAGATCTTCTGCAGCGCTTG-ATTTTCAAGACTTAGAAAAA-AAATTAGAAA-AA--C-A---A-GCGTCCCTAATGATCgtg
gi|4 : ATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAAACACTTTTA-----T-TTT--CAACATTCAA---------TT-----CTGG-ATTTAATTCCAAATTTTTAGGAACTG---------------TTA------------------AA---GTAT---A-------------T---TT-TTCCGTT-T--G--G-------GGTGTA-A--TTTA-----------T-------AAGTATACCTC-----T-----TC------------------TCTGTCCAAAGTACTATATTCTG-TC---T-CAAGTCTGCTATATTCAT-TTGGTCAGGGTTT-TTT-T---TCGTTTCTTACAAAACATCTATTTTTATATTCTAGTAAGTAGACAAT-CAATGAAGATT-----------CGAATATGGCAATAATATTTTA--TTACAGGATCAG--AAAAA--AAAT-GTTTGTTAGATCTTCATATCCATAAATATC-ATAA---AACAGGCA-T-------TTTA--CTTGTC--AT--TTTAAAATATA-ACA-TATTGAAATTAATAATCCTGGCGTCAATTTCAAA--A---TG-----G----A---------------ACA------------GA--------------AG------------------AATATGTACTGTTTTTGCTACATTA-ACTGTTGATG-CAAAA---------ATACAAATATAATAAAAGTTTACCGTCTTAAATTAAAAACTAATAG-AAT--ATAA-TACCCCAA--C----CC------TCT-TT---TT---AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------T-------------CCTGACATCAGACTATAAAATATACCATA---GAAAAAGT-ATATCATCTTTCTTAAAACGTCAGTTGACAAT------G-TAAAAATACTAATATATCAAACTT--CTAAAACTTGAAA---------AAA-AA--A---------T---A--GAAT-A--TT---GTACCCCT----AC-----TTCATT-T-CGGC-TTTCCGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-CTTACAATTA-GCCTGATATCAACCTGATATCAAA------------TACT---AGGTAGATCTACAGGAGATCAATAGATTTA-TCTTTCTTACTATATACATTA-TA------TAGACTTTCT--TA----AAAA-A--A----AA---CTAATTTTGGGTTTACATCCGCCA----TTGT---G----TGT-C-------TGCCA------------------TTTTACATTTTTTTGTCAATTCACAA-A-C-AAATAC---TTTTTCATTT-C--CC-AAACACAATTTAA--GTGT---CACTGGAAAGGGACATACAGCAACATTTAGGCGT-AGTAAGA--CTGGAGTCGGGAAAGTCAAC------G------------ATTC-T-C-CAGCCA-CACTCAGT----------TGAACATTCAACATTTTATTCCAGATTACGGTTATCA-AAAACAGGCAATCGTC-A---TTTTCCCACAATCTTTA-TCCTTTAACAATATGACCATCGA----------------------C---------------------AT--A-----------------------A-----------------------CAGTAATTAAGTGATTCATGCAACCGTAA--AACATTGTGTTT-G-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ACCACGA------------------------------------------------TCGTGTGTAGAAAATT---AAA---A----GTCTAAATCATTTCCGta
gi|5 : TA--T----CC------CCT-TT---TT---GACT---------TTT----GACA---------ATTTTGCCTGTTTCCGAATACTT----TT------TTAAAATACATTGTCCTGACATCAAAT-----AACATACCATA---AAAAAGGT-ATATCATCTTTCTTATTACATCAGCTGTTAAT------G-TAAAAGTACTAATATATCAAACTT--TCACCATCT-------------AAA-AC--TTGAAAAAAAT---A--GAAT-A--TT---GTTCCCCT----A------CCAATT-T-CGGC-TTTTTGCCAATTTTGCCAAT-TTTC---GGGTTTCA------T-CTTACAA-TA---------------TGTTATCAAA------------TACT---AGG------TATAGCAGATCAAGTTAATTA-TCTTTCTTACTATATCAATT-TT------CTAGACATTCATCTT----AAAACA--AAAAAAA---ATACTTTTGGGTTTACATCCGCCATTTTATGTTCGACATTTGT-CAGTATTTTGTCA------------------ATTCACAT-------ATAAATAAC-C-A-C-GATTCCCTTTATT--ATTTCC--TC--AACACTATTTAA--ATGT---CACTTGAAAGGGCCATACAGCAACATATACATGT-AGTAAGA--CTGGAATCTGGAAAGTCAAC------G------------AATCTT-C-GA-CCA-CACTGAGCTGTCT-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AATACAGGCAATCGCC-A---TTATCCCACACTCTTTATTTTTTTAAAAATAAAACCACCGA----------------------C---------------------AT--AATAGTGATCAGTAAATTCAAGCAA-----------------------CCGTA-----------------------A--AATATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGATA-------------ATCACAAATGAAA---ATATTTTGG-------------T-------------AACTCGTGCGTAGAAAATT---AAA---A----GTCTAAATCATCTTCGGCGCAGGCTTTTTC----CGAAGAAAAT-C--CTAGGAATAG--C-A---A-GCATCCCACATGATCAAGAC-TAAAACA--TTAGGGTAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-TCT-TTGATGTCGTTATGGA
gi|6 : tttatattgtacagttccgctacggatgttacagaaattcgtttctcaaccacatttgtgtagcttagccaaccata------A--A---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTT-AATACATCC-ACTGATAATA-CAAAA---------TTACCAATATATTAAACATTTACCGTCTAAAATTAAAAACAAATAG-AAT--GTAA-TACCCCTA--C----CC------CCT-TT---TT---AACT---------TTT----GCCAGTTTTGCCAATTTT---------TGAATA-TTGACATG------TTACAATACGTTGTTCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATAT-----------------CAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCTTAAACTTAAAAA-AAA-AT--T---------T---A--GAAT-A--TT---GTTCCCCT----AC-----CCCATT-T-TGAC-TTTTTGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAG------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAGTTAC-A------TAGACTT-CTT-------AAAA-A--ACAACAA---CTAATTTTGG---TGTGTC----------TGT---A----T-T-T-------TGTCA------------------ATTCAAAT-------ACAAATTA----A-C-GAGTCCCTTTT--CCATTCCC--CCCAAACACAATTTAA--ATAT---CACTGGAGAGGGGTATACAGCAACATTTACACCT-AGTAAGA--CAGGAAT------------T------GGGAAAGTCAATGATTC-T-CCGA-CCA-TACTGAGCTGTCTTAACATGAAAGTTCTACATTTTAACCCAGATTATGGTTATCA-AAAACAGGCAGTTGTG-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACAACGGA----------------------C---------------------AT--AACTGATCAATTAAGTTATGAA--A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AATAATATTTATGCGCG-----AAA-TG--TCATGAAA-------------ATCACTAATGATA---ATATTTTTG-------------T-------------AACAGGTATGTAGAAAAAT---AAA---A----GTCTAAATCAACTTGGA-GTTTGCTTTTTA----ATAAGAAAAA-T--CTAAAAA-AAACC-A---A-GCGTCTCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCAAAGTTGCAGACTTATCTGAAGTTACTT-GATTTTT-TT-T-T-CCGAATTTGTTAtcgaata
gi|7 : GCAA-AATATTTGACTTTACAGA--CA---AAATATTAA-T-GCAT--CAAACTTT--TACTCTCTAAAATTTATAATTGAAAGAGTA-TAATACCCTTTCGACTTTTCGTAAATTTTTGAATATTTATA-CGTTACAA---GTTGTCCTGACATCAA------ATAA---TAAAAGGTCCCGA---------------A--------------AA--------------AG------------------TTTATAAACG-TCCTTAGTGTATCA-GCTGACAATGACACAA---------ATATTAATATGTTAGACTTTAAC--TCTAAATTTTAAAA-AAAT-G-AAT--GTGC-CACCGTTAATC----CCATTCGGCTT-TT---TTTCCAA-----------TTT----GACA---------ATTTTT--------CGAATG-GTAACATAGCGGTATCACAATATGTTGTCCTGGTATAAAAT-ATAAAAAAAAAGATACAGGAGAAATTTATATTAATTTTCTTTGTACATCCGCTGAAAAT------G-C-----TACTAATATATGAAAATT--TTACCGTCT-------------AAA-ATGATG--------T---A--TAAT-T--TA---GGATCATT----ACGTGATCCCTTTCT-CGGCTTTTTTGCCAA------------------------CA------C-GTTACAGTTA-A-------TTATTCTTAAATCAAA------------TAAA---AGA------TAAAGTAAAgg
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatAAA---------ATATTAATGCATCAAACTTTTACTCTCTAAAATTTATAATTGAAAG-AGT--ATAA-TACCC-----------------------T---TTC--GACT---------TTTC---GTAA---------ATTTT---------TGAATA-TTTATACG------TTACAA---GTTGTCCTGACATCAAATAATAAAAGGTCCC------GAAAAAGT-TTATAAACGTCCTTAGTGTATCAGCTGACAAT------GACACAAATATTAATATGTTAGACTT--TAAC--TCT-------------AAA-TT--T---------TAAAA--AAATGA--AT---GTGCCACCGTTAAT-----CCCA-T-T-CGGCTTTTTTTCCAA-TTTGACAATTTTTCGAATGGTAACATAGCGGT-ATCACAATAT-G-------TTGTCCTGGTATAAAA------------TAaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacAACATA-GCGGTATCACAATATGTTGTCCTGGTAT-AA------A--A---TA-----T----A---------------A--------------AA--------------AAAAAGATACAGGAGAAATTTATATTAATT-TTCTTTGTACATCC-GCTGAAAATG-C--------------TACTAATATATGAAAATTTTACCGTCTAAAATGATG------TAT-AAT--TTAG-GATCATTA--CGTGATC------CCT-TT---CTC--GGCT---------TTTTT--GCCA---------A------------------------CACG------TTACAGTTAATTATTCTTAAATCAAAT---AAAAGATAAAGTA---AAAATGGT-GTATTCATTTTCTTTGTGGAACAGCTGAAAAT------T-CTAAAATATTAAAACGTTATACTT--TTACCATTT-------------AAA-ATG-T---------T---AACAAAT-AGGGTAAAGTACCTCT----A------CCCATT-TGTGGCTTTTTTGCAAAT----------TTTCGAATGGTAGCG------T-GTTACAATAA-G-------TTACCCTtaaaaaaaaagatacaggagaaatttatattaattttctttgtacatccgctgaaaatgctactaatatatgaaaattttaccgtctaaaatgatgtataatttaggatcattacgtgatccctttctcggcttttttgccaacacgttacagttaattattcttaaatcaaataaaagataaagtaaaaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|8 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacaaaatattaatgcatcaaacttttactctctaaaatttataattgaaagagtataataccctttcgacttttcgtaaatttttgaatatttatacgttacaagttgtcctgacatcaaataataaaaggtcccgaaaaagtttataaacgtccttagtgtatcagctgacaatgacacaaatattaatatgttagactttaactctaaattttaaaaaaatgaatgtgccaccgttaatcccattcggctttttttccaatttgacaatttttcgaatggtTTA-----T-TTT--CA----T------------AA-----CCGACATT-------CAATTTT--CGA-------------------TTA------------------CA---TTCC---A-------------A---AT-CT----A-T--ACCG-------T----ATATTCTTT-----------T-----------------CGTG--T-----TTGCC---------------T--GTCCAAAGTGCAATACACCGCACGGATAAAAGCCCTCTATGTTCATGTTGG-TA---TTT-TTTGT-AAACATTTCTAACAAGTCGTATTTTGTTACATACAAGTTCGTAGCCAAAACATCGACTATTA----------CAATTA-GAAAATAATATTACA--AAACAGAAATAT--AAAAA--CA-T-GTATGATAGATTTTCATGTTCAATAACATC-ATTA---AATGG-------------TAA--CTTG--------------------------TTGTAGCAAGTAATCCTGGTAT--A------A--A---CA-----T----T---------------A--------------AA--------------AGT-----------------CACA--AA-----TTAAAAAAAACACATTAATAATG-CAAAG---------ATACTAACACGACACATTTTCGGCGTCTCCACTT-----TAATTAG-AATAAATAA-TAATCTT--------------------------------CC---------TTC----ACC----------ATTTT---------CGAACA-TT-ATATA------TAACAA-AAGTTATCCTGACATCAAGTAATAAAATGTACCCTA---GAAATTGT-TTATTAACTATCTTAGTAAATCATCTGAAAAT------G-TAAAAACAGTAATACATCAAACTG--GTACCATCT-------------AAA-AT--G---------T---A--tgcat
gi|9 : cCCATCCATAACA-------------AAC-TAAGA-AAA-C-TTTTTA-----C-TTT--CA---TTGTTCACATTAAATT-----CTGG-ATT-------AAATCCC--AAA-------------------TTTTTAGG-------------AACTTTTACTGTA-------------T---AT-TT----T-TTCA--GTTTTGGTG----T-A--TTTTATATGTATACAT-------A---------T-----C-----TT------------------T--GTCCTAAGTATAATATTTTG-AC---A-GAAGTCTGCCATATTCAG-TTGGTTA---TTT-TTT-T-ATTCATTCCTAATAAAACATCTGTTGTTATATATAAGTAAGCAGACAAAACATTGGAAATTA----------CAAATATGGCAAGAATATTTAA--TTACAGGATCAGA-AAAAA--AA-T-GTTTGTTAGATCTTCATATTCATTAATAGT-ATAA---AATAGGCATT-------TTTT--CTTGTC---C-TTTTAAAATATA-ATA-TATTGCAATACGTAATCCTGACATCAA------A--A---TA-----T----AAAACGTACAGTAGAAA--------------AA--------------AG------------------CATGTTAACT-TTTTTAATACATCA-ATTGATAATG-TAAAA---------GTACTAATATATTTAACTTTTACCGTCTAAAATTAAAAACAAATAGAAAA--ATAA-TACCCTTA--C----CC------CC--TT---TTT--AA-T---------TTT----GCCA---------ATTTA---------CGAATA-TTTACATG------TTACAATATGTTGTCCTGACATCAAATTATAAAATATACCATA---Gttgaaatgtaaattacaactgcttcatatttcatctgaccttcttgttttcatctcagtaaaacgctctgtctggactacagtcactgctatcaaacagatgtc
blockSeqs : C T ACAC TA . ACA TTCCACATTAAATTCTGGATTCAATCCCAAAGTTGTAGGAAATTTCACCGGATATTGTTTAATGTTTTATGTATTTTTCAAGTATACTCCCTCTC CT C GGATAA G GGG G TT A G T . T CT AA TT A T T TT TTG T AATACCC CGA CGTAAAT T C G T A C TTTCAA TA AGG TAAAAAAAAAGATACAGGAGAAATT G A C A TACAAAAAT A AA T ATCCCATTCGG TA AAG TAACT TTTT GTTTTGCCA GCCTGTTTC T C A GCGGTA T C T A CAG TA T TT T CCAATT A . GACATTCATAAAA . CTTGAAAAAAAT AC G GG AAA GTTA CGTGAT C G T TGACAATTTTTCGA TT TAGCGG T GCCTGATA T CCTGATATCGAG GAA TAGATC A TTAATTATC T G AGC C . TTTT TCGACATTTGTCAGTATTT A TTTTTCAGTATTTAGTCT TTTTTTG T CA C T T TT A C TA CA TT G GTC C C GT CGGGAAAGTCAACA T CC G T TT A T T C ACC CC AT A AATAAACAGTGGTAATTTAATTCATGCAACTGTG TC C G AAACT C AA CTATATTTCGGTC G A GCCA TTTTCACGGGAGAT GGGA CTT TGTA T TT CC CAAGAC AAAAT AT T AC A GTT A . A A AAT . TTTT A A TA
blockSeqs : C . GT T . . TTCCACATTAAATTCTAGATTCAATTCCAAATTTTAGGAACTTTTACCCGTATATTTCTTCAATTATAGTGTATTTTATAAGCAAACCCCATTTC . . TT . . . GT T T A . G . A . . . T T . . . A CACAC . T . T A C . . . TAAAACGTACAGTAGAAAAAAG . A . . . . . . CGTGATC T . TCCAA TT . T T . G . T C T C . A T CG A . . . TAAACTTAAAAA . TGATGT . . . . . C . . T TGACCATTTTAA GT . . AG G . . . . TTC C G AT C . . ATGTT G . . A AA . . T TA A C . A . G . A . . TTGGAAAAGCAACG . TC . . C A T . . CC TT C A CATAACAGTTATTAGTAAACACACACTACCTTA . . . . C . . G T A TCATCACGGGAGAT T . . A TC CA TC GGCT AA . G . . . . A A TC . TTTT . . TG
blockSeqs : . . CT C . . GTTCACATTAAATTCTGGATTAAATCCCAAATTTTTAGGAACTTTTACTGTATATTTTTTCAGTTTTGGTGTATTTTATATGTATACATATCTT . . TC . . . T T G C . T . . . . . G T . . . A CAC . C . T T A . . . TAAAAGGTACAGTTGACAAAG . C . . . . . . CCA T . CGACT C . . T . A . T C T T . A T AA G . . . GAAA . TTTAAA . . . . . C . . T TGACAATTTAAT TT . . G G . . . . TT T G CA C . . ATGTC C . . T C . . T TC A C . G . A . C . . CGGGAAAGTCAACG . CC . . T A T . . . TC A A CATAACAGTAATTAAGTGATTCATGCAACCGTA . . . . C . . G G A T A . . T TC CT CC ACC AA . G . . . . A A TT . T . . CC
blockSeqs : . . CT T . . CAATTCTGGATTTAATTCCAAATTTTTAGGAACTGTTAAAGTATATTTTTCCGTTTGGGGTGTAATTTATAAGTATACCTCTTC . . AG . . . C A T T . G . . . . . T C . . . T CAC . C . T T C . . . AAAGGTCCCGAAAAAG . A . . . . . . CCC T . CGGCT . . . T . G . T T T T . G C TC A . . . GG . TTTGA . . . . . C . . . TGACAATTTCAA TT . . G G . . . . TC A A A A . . GTGCC C . . C C . . T TT A C . A . A . A . . CTGGAAAGTCAACG . CC . . C T T . . . TC C C CATAATAGTGATCAGTAAATTCAAGCAACCGTA . . . . . . . G A A T A . . T TC CT TA CCC AA . . . . . . A A TC . . . . CT
blockSeqs : . . GA T . . AACCGACATTCAATTTTCGATTACATTCCAAATCTATACCGTATATTCTTTTCGTGTTTGCC . . TA . . . T T G C . G . . . . . T C . . . C CAC . C . T A C . . . GAACAGAAG . G . . . . . . CCC T . AACT . . . T . A . T A T C . A C TC A . . . . . TGTT . . . . . C . . . TGACAATTTCAA TT . . G A . . . . TA T A A C . . GTGTC T . . A C . . . T A . . . . G . G . . TGGGAAAGTCAATG . C . . C A T . . . TC A C CATAACTGATCAATTAAGTTATGAAACCGTA . . . . . . . G A A T A . . G TT CT CC GTC CA . . . . . . A A TC . . . . A
blockSeqs : . . GA T . . CTCCAGATTTAACTCTACATTTAACTACAAATTTTAGGAACGTTTACCGTATTTTATC . . AC . . . T T T T . T . . . . . A C . . . A CAT . T . T T C . . . TTAAAAGT . G . . . . . . CCC T . AACT . . . T . T . T A A T . A C TC T . . . . . TTA . . . . . C . . . TGCCAATTTTC AA . . A G . . . . CA T T A . . . ATTT T . . T . . . . C . . . . . G . A . . CG . C . . C C T . . . TC A C CACGACCTTA . . . . . . . A A A T A . . A TC A AA GCC AG . . . . . . G A TT . . . . T
blockSeqs : . . CA C . . GTCCACATTAAATTCTGGATTCAATCCGAAATTTTTAGGAACTTTTACTTT . . TC . . . T A G A . T . . . . . T C . . . A CCT . C . C T C . . . TAAAATG . A . . . . . . TCC T . GACT . . . C . T . T T A A . A T AT G . . . . . CTT . . . . . C . . . TTTCGA AG . . G T . . . . T . . . . . . . . A . C . . AG . A . . T A T . . . . A A CGTGACCTTA . . . . . . . T A A T A . . A AC . C TCC AG . . . . . . A C TC . . . . T
blockSeqs : . . CT T . . TTTCAAAATAACTTCTGGATTCAATTCCAATTTTTTAGGAACTTCTCCCTT . . TC . . . T T G A . G . . . . . . T . . . T . . T . T A . . . . GAAAAAG . A . . . . . . CCC T . AACT . . . T . . . . . T G . A A AC G . . . . . ATT . . . . . T . . . AC T . . G T . . . G . . G . C . . T T . . . . . . C CATAACCGTA . . . . . . . . . . T . . . A T . . ATC AA . . . . . . A A T . . . . G
blockSeqs : . . CT T . . . . AG . . . . . . . . . . . A . . . . GAAAAAG . . . . . . . . CCC . . TAAT . . . . . . . . . . G . T T AT G . . . . . CTT . . . . . . . . . . . . . . C . . . . C . . . CATCACAGTG . . . . . . . . . . . . . . A . TC . . . . . . . . . T . . . . T
blockSeqs : . . A C . . . . . . . . . . . GAGAAG . . . . . . . . CC . . . . . . . . . . T . G T AC G . . . . . AAT . . . . . . . . . A . TC . . . . . . . . . C . . . . T
blockSeqs : . . . . . . . . . . T . T . . . . . . . . TTT . . . . . . . . . .
blockSeqs : . . . . . . TGT .
blockSeqCons : T****** ** ********** C* T* AACT************ A* ** TGACAATTTCGA** G**** *** GTGTC*************** TT C** TC CT ** TC**
originalCons : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTTTA-----T-TTT--CA---TT------------TT-----CCGG-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TTNC---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTT--AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT---A----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTCCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCNTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
finalCons : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTTTAT------TTT--CA---TT------------TT-----CCGG-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TTNC---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAATAG-AAT--ATAA-TACCCCTA--C----CC------CCT-TT---TTAACT------------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGTA-TATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAATTTCGA--AGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGTGTGTC---------------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTTCATTTCC--CC-GAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-TC--GA-CCA-CACTGAGCTGTCC-AACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCTTTTTC----CTAAGAAAAN-C--CTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAATC--AGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|31 ): TATTGAACAGATCTGCCACGAACGTTGAGGACTGACATCGTTTCTCACCACATTTGTGTAATCTGGCCAACCGTAT
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 1111 444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 111111 1111111111 11 1111111 2222222 77777777777777777777777777777777777777777777777777777777777777777777777777777 111111111 111111111 1111 111111111 111111111 111111 4444444444444 22222222222222222 1 22222222222222 111111 111111111 222222222222 111111 555555555 11111 1111 1111 22222222222222222222 333333333333333333 1111111 111 1 22222222222222222222222222222222 111 111 4444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444444 11111 1 2222222222222 444444444444444444444444444 1111 222222 11 1111 111
lowQualScore : 7 3 0000 8888888 44 555 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 55 4 111111 0 4 777 4 555 1 1 1 0 9999999999 5 0 55 00 66 4 4 1 77 777 4 4444444 777 8888888 3 1 3 1 5 3 999999 44 555 22222222222222222222222222222222222222222222222222222222222222222222222222222 3 1 4 4 444444444 0 3 3 88 3 1 44 999999 1 66666 0 333333333 6666 444444444 888888888 1 3 9 000000 2 6 7 1 555 55 2 22 1 888888 3 44 0 3333333333333 3 00000000000000000 44 3 55 666 7777 999999 4 4 2 0 00000000000000 44 111111 4 222222222 2 000000000000 777 222222 0 0 5 0 0 111111111 0 0 00000 4444 2 888 0 2222 77777777777777777777 1 666666666666666666 6666666 1 888 5 5 999 3 5 4 77 1 0 66 2 888 1 4 55 0 11111111111111111111111111111111 4 222 4 4 44 2 1 4 4 333 66 66 1 1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 55 4 4 00000 2 55 2222222222222 1 2 7777 000000000000000000000000000 0000 666 7777 1 5 0 1 444444 4 55 22 3 44 3 555 3 3 4 1 6666 3 9999 3 3 111
lowQualScore : . . .... ....... .. ... ........................................................................................................................................................................................................................ .. . ...... . . ... . ... . . . . .......... . . .. .. .. . . . .. ... . ....... ... ....... . . . . . . ...... .. ... ............................................................................. . . . . ......... . . . .. . . .. ...... . ..... . ......... .... ......... ......... . . . ...... . . . . ... .. . .. . ...... . .. . ............. . ................. .. . .. ... .... ...... . . . . .............. .. ...... . ......... . ............ ... ...... . . . . . ......... . . ..... .... . ... . .... .................... . .................. ....... . ... . . ... . . . .. . . .. . ... . . .. . ................................ . ... . . .. . . . . ... .. .. . ............................................................................................................................ .. . . ..... . .. ............. . . .... ........................... .... ... .... . . . . ...... . .. .. . .. . ... . . . . .... . .... . . ...
lowQualScore : 3 6 3333 4444444 66 888 888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888888 55 0 444444 8 0 000 0 444 2 1 0 7 4444444444 0 7 55 66 11 4 4 9 11 888 4 4444444 111 8888888 6 2 6 3 8 6 666666 66 888 77777777777777777777777777777777777777777777777777777777777777777777777777777 6 3 0 0 555555555 2 6 6 66 6 2 66 666666 1 88888 4 333333333 4444 555555555 222222222 4 6 5 555555 1 5 6 0 444 22 2 44 6 888888 1 22 5 5555555555555 1 66666666666666666 22 6 00 444 7777 666666 0 0 0 8 33333333333333 33 555555 0 444444444 8 555555555555 888 888888 5 2 0 2 4 222222222 4 4 99999 0000 5 888 7 1111 33333333333333333333 0 999999999999999999 2222222 0 666 7 7 666 9 7 3 99 1 8 99 2 888 0 0 55 9 99999999999999999999999999999999 0 555 0 0 55 1 9 4 4 999 44 22 7 7777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 55 0 0 00000 0 55 0000000000000 6 4 7777 000000000000000000000000000 4444 444 7777 0 7 1 1 333333 0 99 88 3 66 3 888 3 3 5 0 5555 6 1111 6 6 555
consensus : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTTTA-----T-TTT--CA---TT------------TT-----CCGG-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TTNC---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAAT-AG-AAT--ATAA-TACCCCTA--CCC------CCTTTT-T---AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT--G-----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTTCATT-TCC--CCGAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT--GGAAAG-CAAC------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTC-CAACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCTTTTT----CCTA-AGAAAAN-CCTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
Reference ( family-341 ) : GTATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAA-C-TTTTTA-----T-TTT--CA---TT------------TT-----CCGG-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TTNC---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCAT-TTGGTTA---TTT-TTT-T-ATTCATTTCTTACAAAACATCTATTGTTATATACNAGTAAGTAGACAAAACATCGGAGATTA----------CAAATATGGCAAGAATATTTCA--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTN--CTTGTC--ACACTTTAAAATATA-ACA-TATTGCAATAAGTNATCCTGACATCAA------A--A---TA-----T----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATTAAACTTTTACCGTCTAAAATTAAAAACAAAT-AG-AAT--ATAA-TACCCCTA--CCC------CCTTTT-T---AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------TTACAATACGTTGTCCTGACATCAAATTATAAAANATACCATA---GAAAAAGT-ATATTANCTTTCTTAGTACATCAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCT-------------AAA-AT--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-CGGC-TTTTTGCCAATTTTGACAA--TTTCGAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAATTATTA-----CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CTAATTTTGGGTTTACATCCGCCA----ATGT--G-----TGT-C-------TGNCA------------------ATTCACAT-------ACAAATNAC-C-A-C-GAGTCCCTTTTTTTCATT-TCC--CCGAACACAATTTAA--ATGT---CACTGGAAAGGGNCATACAGCAACATTTACACGT-AGTAAGA--CTGGAAT------------C------G------------ATTC-T-C-GA-CCA-CACTGAGCTGTC-CAACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ATCACGAATGATA---ATATTTTGG-------------T-------------AACTCGTGTGTAGAAAATT---AAA---A----GTCTNAATCATCTTCGACGCTTGCTTTTT----CCTA-AGAAAAN-CCTAAGAA-AA--C-A---A-GCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGA
gi|1 : ATTCCATTCATTATACTCAGTGTTGAAAAAC-TAAAA-ACT-C-TTTTTACTGTCT-TTTAACA---CT------------TTAAATTCTGA-ATTCAATCCTAAATTTTTAGGAAC-----------------TTT------------------TA---TCGT---A-------------T---AT-TT----T-T--T--T-------C----A-A--TTTTGGTT-------T-------A---------T-----T-----TTACAAGTATACCCCCTCTGT--GTGTAAGGTACAATATTCTG-AC---T-CAAGTCTTCCATATTCGT-TT--TT----TTT-TTT-T-ATTAATTTCTTACAAAACATCTTTTCTTATATACTAGTAAGTAGGCAAAACATTGGAGATTATAACAAAATACAAATACGGCACGAATATTCTA--TTTTATAATCAG--AAAAA--AA-T-ATA-----GATCGTCATATGCATTAATAT----AA---AATGGGCA-T-------TTTA--TTTGTC--AC--TTTAAA-TATG-ACA-TATTGTAATAC----TCCTGACATCAA------A--A---TA-----T----A---------------A--------------AAGGTACAGTAGAGAAAG------------------CACATTAACT-GTTTTAATACATCA-ACTGATAATG-CAAAA---------ATACCAATATATCAAACTTATACCGTCAAAAATTAAAAACAAAT-AG-AAT--ATTA-TACCACTA--CAA------CCGTTT-T---GACTTTTGCCAAATTT----GCCA---------ATTTT---------CGAAAT-TTAACATG------TTACAATACGTCGCCCTGACATCAAACTATAAAATATACCACA---GAAAAAGT--CATCATCTTTCCTAATACATCAGCTGAAAAT------G-TGACAATATTTATACATCAAAGTTCATCA-CATTG-------------AAACAA--T---------T---A--GAAT-A--TT---GTACCCCT----AC-----CCCATT-T-TGGC-TTTTTGTCAGTTTT-----------GAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTTTTATCAAT------------TACT---AGG------TATGGCAGA--------------CCTTCATACTATATCAGTTA-TA------TAAACTTTCTTCTGAAAAAAAA-A--ACAACAACATCTAGTGTTTGGTTTACATCCGCCA----ATGT--A-----TATAA-------AAACA------------------ATTCAAAT-------TCA
gi|1 : AAAACAATTCAA--AT-T---CACTGGAAAGAGACATACAGTAATATTTACACAT-AGTAAGA--CTGGAAT------------CTAGAAAGTCAAAC------ACTC-T-CCGA-CCA-TACTGACCTGTC-TAACATGATTG------ATTTTAA--------------A-CA-AAAACAGGAAATCGTC-A---TTAT---ACAATCTGTA-TTCTTTTAAAATATGACCACCGA----------------------CGAAACAGTGATCAATTAATTCATGCA-----------------------A-----------------------CCGTT-----------------------A--AACATTGTGGTT-T-TAGACGATTTATTCGTG-----AAA-TG--TCATGAAA-------------ATCACGAATGATA---CAATTTTGA-------------A-------------AACTGGTGTGAAGAAAATT---AAA---A----GTCTTAATCATTTTCAACGCTTGATTTTT-----TTA-ATAAAAT-ACTAAGAA-AAG-C-A---A-GCGTCCCAGATGATCAAGGCTTAAAACA--T-AGGGAATTTTCCAAGTTACGAACGTGTCCGAAGTTACCCTG-------TT-T-T-CCGATTTAATCATAGActggaaagagacatacagtaatatttacacatagtaagactggaatctagaaagtcaaacactctccgaccatactgacctgtctaacatgattgattttaaacaaaaacaggaaatcgtcattatacaatctgtattcttttaaaatatgaccaccgacgaaacagtgatcaattaattcatgcaaccgttaaacattgtggttttagacgatttattcgtgaaatgtcatgaaaatcacgaatgatacaattttgaaaactggtgtgaagaaaattaaaagtcttaatcattttcaacgcttgatttttttaataaaatactaagaaaagcaagcgtcccagatgatcaaggcttaaaacatagggaattttccaagttacgaacgtgtccgaagttaccctgttttccgatttaatcatagacgaaa
gi|10 : attccattcattatactcagtgttgaaaaactaaaaactctttttactgtcttttaacactttaaattctgaattcaatcctaaatttttaggaacttttatcgtatatttttttcaattttggtttattttacaagtataccccctctgtgtgtaaggtacaatattctgactcaagtcttccatattcgttttttttttttattaatttcttacaaaacatcttttcttatatactagtaagtaggcaaaacattggagattataacaaaatacaaatacggcacgaatattctattttataatcagaaaaaaatatagatcgtcatatgcattaatataaaatgggcattttatttgtcactttaaatatgacatattgtaatactcctgacatcaaaatataaaaggtacagtagagaaagcacattaactgttttaatacatcaactgataatgcaaaaataccaatatatcaaacttataccgtcaaaaattaaaaacaaatagaatattataccactacaaccgttttgacttttgccaaatttgccaattttcgaaatttaacatgttacaatacgtcgccctgacatcaaactataaaatataccacagaaaaagtcatcatctttcctaatacatcagctgaaaatgtgacaatatttatacatcaaagttcatcacattgaaacaattagaatattgtacccctaccccattttggctttttgtcagttttgaagggtttcatgttacaattagttagccttttatcaattactaggtatggcagaccttcatactatatcagttatataaactttcttctgaaaaaaaaaacaacaacatctagtgtttggtttacatccgccaatgtatataGTATTCAATCCATAATACTCAATGTTTAAAA-C-TAAAA-AAG-G-TTTT-A-----T-TT---CA---TT------------TT-----CCAC-ATT-------AAATTCT--GGA-------------------TTCAATCCCAAAGTTGTAGGAAA---TTTC---ACCGGATATTGTTTA---ATGTT----T-T--A--T-------G----T-A--TTTT-----------TCAAGTATA---------C-----TCCCTCTC------------------T--GTCCAAAGTACAATATTCTT-AC---T-TAAATCTTCCATATTGAT-TTAGTTA---TTTGTTT-T-AACCATTTCTTACAAAACATCTAGTGTTATATACTAGTAGGTAGACAAAACATCGGAGATTA----------CAAATATGGCAATAATATTTCA--TAACAGGTTCAGAAAAAAA--AA-T-GTATGTTAGATCTTCATTTTCATTAATATT-ATAA---AATGGGCA-T-------TTAA--CATGT----CACTTTGAATTACA-ACA-TATTGCAATAAGTAATCCTGACATCAA------A--A---TA-----T----A---------------AAAGGTACAGTTGACAA--------------AG------------------CACACTAAC--GTTTTAATACATTA-ACTGTTAATG-CAAAATACAAAAATGTACCAATATAGTAAACATTTACCGTCTAAAATTAAAAACAAAC-AC-AAT--ATAATTACCCCTA--CCA------CC-TAT-T---AAGT---------TTcgaaa
gi|11 : ACAT-------AGAAATAAC-C-A-T-GAA--CATCTTGTTCTTT-TCC--CCGAACACTCTTTAATTATGT---CAATGAAACGGGCCAAACGGCAATATTTTCACGT-AGTAAGA--C-------------------------G------------AGTA-T-C-AG-CC----------TGTC-CAAAATGAACGTTCTACATGCTTACCCGTGTGTAGGTTATTA-ACA-CATTTAATCGTCCACC-TTA---CACAATCCTTC-TCCTTTAAAAACATGACCACCGA----------------------C---------------------AT--A-----------------------ACAGTTATTAGTAAACACACACTACCTTA-----------------------A--AACATTGTTTTTCT-AAGACGATTTATTCGTG-----AAACTG--TCATGACA-------------ATCAC-AATAACAGCCATATTTTGGTTTTCACGGGAGAT-------------AACTC-T-TGCCGAAAATTGGGAGA---A----GTCTTTATCATTTaaacatatttattttataattt
gi|11 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaCATTTCAGATATTCAAGAC-T---------TAGCGGAATTCACAAGTTACGGATTTAACCGAGGTTACCC-GA----T-TT-T-TACCGATATCGTTcagatattcaagacttagcggaattcacaagttacggatttaaccgaggttacccgatttttaccgatatcgttctacatagaatagctttaa
gi|12 : gttttccgcaatcatgtttatttctccacagtctggattttctcgatgaacatagaaataaccatgaacatcttgttcttttccccgaacactctttaattatgtcaatgaaacgggccaaacggcaatattttcacgtagtaagacgagtatcagcctgtccaaaatgaacgttctacatgcttacccgtgtgtaggttattaacacatttaatcgtccaccttacacaatccttctcctttaaaaacatgaccaccgacataacagttattagtaaacacacactaccttaaaacattgtttttctaagacgatttattcgtgaaactgtcatgacaatcacaataacagccatattttggttttcacgggagataactcttgccgaaaattgggagaagtctttatATGTTTAAAAAC-TAAAA-CGA-C-TTTTTA-----C-CTT--CA---TT------------TT-----CAAC-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TCCC---A-------------A---TT-TT----T-T--A--G-------G----A-A--GTTT-----------T-------A---------C-----ctacatagaatagctttaa
gi|12 : ccTT-----------T-------C---------C-----T-----CTC-----------------T--GTCCAAAGTACAGTATTATA-AC---T-CA--TCTACCATATTCAT-CTGGTTA---GTT-TTT-C-ATTCATTTCTTACAAAACATCTATTTCAATATACAAATAAGTAGACAAAACATTCGAAATTA----------CAAATATGACAAGAATATTTCC--TTACAGGATCAG--AAAAA--AA-T-GTATGTTAGATCTTCATATTCATTAATATT-ATGA---AATTGGCA-T-------TTTA--CCTCT----CACTTTAAAATATA-ATA-TATTGCAATAAGTAATTCTGACGTCAA------A--A---TA-----T----cgtatactttttcagttttggtgtattttataagcatattaatttcctctctgtccaaagtacagtattataactcatctaccatattcatctggttagtttttcattcatttcttacaaaacatctatttcaatatacaaataagtagacaaaacattcgaaattacaaatatgacaagaatatttccttacaggatcagaaaaaaatgtatgttagatcttcatattcattaatattatgaaattggcattttacctctcactttaaaatataatatattgcaataagtaattctgacgtcaaaatattga
gi|13 : ccatgtttaaaaactaaaacgactttttaccttcattttcaacattaaattctggattcaatcccaattttttaggaagttttaccgtatactttttcagttttggtgtattttataagcatattaaTATTCCATGTATAATACTCACTATTTATAAAC-TGAAATAAA-C-TTT---------------CA---TT------------CT-----CCAG-ATT-------TAACTCT--ACA-------------------TTT------------------AA---CTAC---A-------------A---AT-TT----T----A--G-------G----A-A--CGTT-----------T-------A---------CCGTATT-----TTATC---------------T--GTCCAAAGTACAACAAACTG-AA---A-GAAGCCTTCTATATTCAG-ATGGTTA---TTT-GTT---ATCCATTAATTAAAAATCATCTATTGTTATA--CCAGTAACTAATCAAAACATTGGAGATTA----------CAGATATGACAATAATACATCA--TTACAGGATCAG-----AA--AA-T-GTTTGGTAAACCTTCTTATTCAATAACATC-ATCA---AGTG---A-T-------TTTT--CTCGT----CACTTTAAAATGTA-ACA-TGTTGCATTAAGTTAATCTGACATAAA------A--AAGGTA----------G---------------A--------------GA--------------AG------------------AAAATTCACT-TTtga
gi|14 : ------G------------ATTA-T-CCGA-CCA-CACTGAACTGTC-TAACATGAACGTTTTACATTTTAACCAAGATTAAGGTTATCA-AAAACAGGCAATCGTC-A---TTACCCCACAATCTTT---TCTTTAAAAATATGCCTACCGAAATAAACAGTGGTAATTTAATTC---------------------ATGCA-----------------------A-----------------------CTGTG-----------------------A--AATATTGCGTTT-T-AAGTCGATTTATTCGTG-----AAA-TA--TCACGGAA-------------ATCACGTTTGATA---ATATTTTGG-------------T-------------AACTCATGTTTAGAAAATT---TAA---A----GTCTAAATCA------GTGCTTGCCTTTT----TCCA-AGAAAAA-CCT------------A---A-GCGTCATAGATGATCAAGAC-TAAAAAA--Taa
gi|15 : ctaggaattgaaaagtcaagACATCAACAAACAGTCCAATTA-TGAAATTATT--TATATTAAGCTT--TTACCAACTGACATTCATAAAAAAA-AT--T---------A---A--GAAT-A--TA---GTACCCCT----AC-----C--------------------CAATTT--AC------------GGTT-CA------TTGCCAAAATCAAG-------TCTTTCTGATATCAAG------------AACTGAAAGG------TACAAAAGATCAAGCAATTTAATC--TCTTACTTTTTCAATTATT-------TACACTTTCTACTG----AAAA-AGCACACCAA---CTAAGTTTGGGTTTACATCCGCCA----ATGT--A-----TGT-T-------TGATA------------------ATTaga
gi|16 : ATAAACAC--A----------------------C---------------------AC--G-----------------------A-----------------------CCTTA-----------------------A--AGCATTGTGTTT-TGAAGAGGATTTCTTTGTG-----AAACTGAATCACGAAA-------------GGCA------ATC---ATATTTGGG-------------TCATCACGGGAGATAATTTGTGTCTA-AAAATT---AATCTTA----GTTTTAATCAT-TTCAACACTT---TTTT--------------AT-C---------A--C-AGTTA-GCTTCGAAGATAATCAATAC-T---------TAGGGGAAATCCCAAGTAACAGACTTATCTGAAATTACCC-TG----T-TT-T-TGCTGATTTCATTATgtcaattatggctgtctattata
gi|17 : aaaagtgatcaA----------------------C---------------------GT--G-----------------------A-----------------------CCTTA-----------------------A--AACACTGTGTTT-A-AAGACGATTTATTCGTG-----AAACTG--TTACGAAGCTATATTTCGGTCATCACGGGCGGGA----------GG-------------T-------------AACTCGTGTC--GAAAA-----AAA---ATGTAGTCTTAATCAT-------------TTTCT----C------------------AA-AG--C-A---A-GCGTCGCAGATAATCAATAT-T---------CAAGGGAAGTACCAAGTTACGGACGCATCCGAAGTCACCA-GA----TATA-T-A-CCGGTTTCGTTATGGAacatggaatacc
gi|18 : aaacgcGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTTTA-----T-TTT--CA---TT------------TC-----TC--------------AATCCG--GCA-------------------TTC------------------AA---TCAC---A-------------AC--AT-TT----T-T--tggaatac
gi|19 : atttgtatttacctttaaaGTAGTCTACTTAAAATGCTTAATCTTTAAAAACCTTAAA-AAA-G-ATTTTA-----T-TTT--CA---TT------------TC-----TC--------------AATCCG--GCA-------------------TTC------------------AA---TCAC---A-------------AC--AT-TT----T-T--ttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|2 : atttgtatttacctttaaaGTATTCCATCCATAACACTCAATGTTTAAAA-C-TAAAA-AAA-A------A-----TATTT--CA---TT------------GT-----CCAC-ATT-------AAATTCT--GGA-------------------TTC------------------AA---TCCG---A-------------A---AT-TT----T-T--A--G-------G----A-A--CTTT-----------T-------A---------C-----T-----TT------------------T--GTCCAAAGTTCAATATTCTG-AC---T-AGAGTCTTCCGTATTCAT-TCGGTTG---TTT-CTT-T-AATCATTTCTTATAAAACATCTATTTTTGTATACTAGTAAGTAGACAAAACATTGGAAATTA----------TAAATATGGCAAGACTATTTCA--TTACAGGATCAG--AAAAA--AA-TTGTATGTTAGATCTTCATATTCATTAATATC-ATAA---AATGGGCA-T-------TTTC--CTTGTC--ACACTTTATAATATA-ACA-TGTTGTAATAAGTTATTCAGACTTCAA------A--A---TA-----T----A---------------A--------------AA--------------TG------------------CACATTAACT-TTTTTAATACATCA-ACTGAAGATG-GAAAA---------ATACCAATATATCCAACTCTTATCGTCTAAAATTAAGAGCAAAT-AT-AAT--ACAA-TACCTCTA--CCC------CCTTTTTT---AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATT------CTACAATACGTTGACCCGACATCGAATTATAAAAAATACCACA---GAAAAAGT-ATATTATTTTTCTTATTACATCAGCTGACAAT------G-TAAAGATACTAATATATCGAGTTT--TTACCATCT-------------AAA-AC--T---------T---A--GAAT-A--TT---GTACCCTT----AC-----CCCATT-T-CGAT-TTTTTGCCATTTTTGACCA--TTTTAAAGGGTTTCA------T-GTTGCAAGTA-G-------TTAGTCTGATATCAAA------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TGCGTCTTACTATATCAATTATTAATTATCTAGACTTCCTTCTG----AAAA-AT-ACAACAA---CTAGTTTTGGGTTTACTTACGCCA----ATGT--A-----TGT-C-------TGGCA------------------ATTCACAT-------GCAAATTAC-C-ACC-GAGTCCCTTTTTTTCATT-TCT--CCAAACACAATTTAA--ATGT---CACTTGAAAGGGACATACAGCAACATATACATGT-AGTAAAA--CTGG--C------------C------G------------ATTC-T-C-GA-TCA-CATCGAGCTGTC-CAACATGAACGTTCTATATTTTAACCCAGATAAAGGTTATCA-AGAACAT----TCGTC-A---TTATTCCATAATCTTTA-TTCTTTAAAAATATGACCACCGA----------------------C---------------------AT--A-----------------------A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------AGTACGAATGTTA---ATAACTTGG-------------T-------------AACTCGTATGTAGAAAATT-----A---A----GTGTGAATCATCTTCGACGATTGCATTTT----CCTA-AGAAAAC-CCTATGAA-AA--C-A---A-GCATCCCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCTAATTTACGGGCTTACCCGAAGTTACCC-GA----T-TT-T-T-CCGATTTCGTTATGGAttatcataacttcaccaaatgtttttatcagttttgttatattcataagtataacttctccccgtctaaagtacaatttactgacaaatagctcatttcgtacacataatctattgttaagtct
gi|20 : TTCATCCTTAATACATAACGTTTGAAAAC-TGTAA-AAA-C-ATCTTA-----T-TTT--CA---TT------------TT-----TCAA-AAT-------AACTTCT--GGA-------------------TTC------------------AA---TTCC---A-------------A---TT-TT----T-T--A--G-------G----A-A--CTTC-----------T-------C---------C-----C-----TT------------------a
gi|20 : a-----TC------------------T--ATTCAACGTACAATAAAAGG-AC---A-CAAGTCTTCCATATTCAG-TTGATTA---TCT-TTT-T-ATTAATTTCTatatttgttctgttttggtatactttataagtatatctcctctctattcaacgtacaataaaaggacacaagtcttccatattcagttgattatctttttattaatttct
gi|21 : attcatccttaatacataacgtttgaaaactgtaaaaacatcttattttcatttttcaaaataacttctggattcaattccaattttttaggaacttctcccttatatttgttctgttttggtatactttataagtatatctcctcACATGT-AGTAAGAGTTTGGAAA------------A------G-----------------T-A-AA-TCATCAGT---CTGTC-CAAAATGAACGTTCTACATTTTAACCAATGTTTTGGTTA--ATAAAATGGGCACTTGTC-AACCTTA---CACAATACCTC-TCCTTTAACAACATTGCCACCAA----------------------C---------------------AT--A-----------------------A-----------------------
gi|22 : aatacaattcaagataactctaaataccaCA------------------ATTCACAT-------ACAAATAAC-C-A-CTGAGTCCC--TTTTACATT-T-C--CCGAACGCTATTAAG--ATATGTCCAC-GGAAAAGACCAAACGTCAACATTTACATGTCGGTAAAA--CGGGaagttattattaaacacacacaacaaac
gi|23 : tttttttcttaattgtcagagttttctGACAT-AAATTATAAAGCATACCATA---GTAAAAGT-ATATTACGTTTCTTAATGCATCAGCTGACAAT------G-TAAACATATTAAAACGTCAAACTT--TCACCTTCG-------------AAA-AT--T---------TGA-A--GAAtccctagatccgcctatac
gi|24 : ataacgtttatctgcaataagAAAAGGACATGTAGCAACATTTACACGT-AGTAAGA--CTGGAAC------------C------GGGAAAGTCAACAATTC-TTC-AA-CCA-CACTGAGTTGTC-CAACATGAACATTCTACATTTTAACTCAGACTaa
gi|25 : GATAAG-TCTAAGAA-AAG-C-G---A-GCGTTCCAGATGATCAAGTC-TAAAAAAAAT-AGGGGAGTTTCCAAGTCACGGACTTATCCGAAGTTGCCC-GATTTTT-TT-T-T-CTGATTTCGTTATGGAttattctataaaaat
gi|26 : TA-AGAAAAGGCTTAAGAA-AAG-C-A---A-GCGTCCAAGATGATCAAGAC-TAAACAA--TTACGGTAATTCCCAAGTTACTGACTTATCCGAAGTTATCC-GT----T-TTAT-G-TCTATTTCAATATGcagaat
gi|27 : AAGAA-AA--C-A---AAGCGTCCCAGATGATCAAGAC-TAAAAAA--TCAGGGTAATTCCCATGTTTCGAACTTATCCGAAGTTACTC-GA----T-TT-TCC-CCGATTTCGTTATGGA
gi|28 : acTACCATA---GAAAAATT-GTGTTGAATTACTCAGTGCATCAGCTGACAAA------G-CAAAAATACTGATTCACCA----T--TTAAAATTTGG-----------AAA-AA--T---------T---A--AAAT-G--TA---GTACCCCA----AC-----CCcgg
gi|29 : g-------TTGGCCTGATATCAAA------------TACT---TCG------TACAGCAGATCAAGCAAATAA-TCCTTCTTACTATATCAATTAT-------CTAGACTTTCTTCTG----AAAA-A--ACAACAA---CAAA
gi|3 : tggtttcatGTATTCTATCAATAATACTCAATGTTAAAAAAC-TAAAA-AGA-C-TTTTTA-----C-TTT--CA---TTTTCCACATTAAATT-----CTAG-ATTCAATTCCAAATTTTA-GGAACTTTTACCCGTATATTTCTTC------------------AA---TTAT---A-------------GTGTAT-TT----TAT--A--A-------GCA--A-A--CCCC-------------------A---------T-----T-----TC------------------T--GTCCAAGGAACAACATTCTG-AC---T-CGCGTCTGTCATATTCAT-CAGGTTA---TTT-TTT-TTATTCATTTCTTACAAAACATATATTGTTATATATCAGTAA-TAGACAAAACAACGGAAATTA----------CAAAAATGGCAAGAATATTTAA--TTACAGGATCa
gi|3 : agACTTTAAAATATA-A----------A-AAGT-------ACA-------------G---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTTTA-TACATCA-ACTGATAATA-CAAAA---------ATACCAATATATTCAACTTTAACCATCTAAGATTAAAAACAAAT-AT-AAT--ATAA-TACCCCTA--CCC------CCTTTT-A---AACT---------TTTTTTTGCCA---------ATTTT---------CGAA-A-TTGACATG------TTACAATA-ATTGTCCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATATCATCCTT-TTAAAACATCAGCTGACAAT------G-TAAAAATACTAATACATCAATCTT--TCACCGTCT-------------AAA-AC--T---------T---A--CAAT-A--TT---GTACCCCT----AC-----CAAATT-T-CGGA-TTTTTGCAAATTTTGACAA--TTTAATAGGGTGTTA------T-GTTTCAATTA-G-------TTAGCCTGATATCAAACCTGATATCGAGTACT---AGG------TACAGCAGACCAAGCAAATGA-TCCTTCTTACT-------TTAT------------CTTACTTCTA----AAAA---------AA---CTAATTTTTGGTTTACATCAGCCA----ATGT--G-----TGC-C-------TGCCATTTTTCAGTATTTAGTCTATTCACAA-------ACACATTAC-CAA-C-AAGTCCC-TTTTTTCTTT-TCCTACC-AACACAATTTAA--ATAT---CACTAGAAAGGGGCATA-AGCAACATTTATGCAT-TGTAAGA--CTGGAATTTGGAAAAGCAAC------G------------TTTC-TCC-GA-CCA-CTCTGAGCTGTC-TAACATGAAGTTTCTACATTTCAAACCAGATTAAGGTAATC--AAAACAGGCAATCGTC-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACCACAGG----------------------C---------------------AT--C-----------------------A-----------------------CAGTG-----------------------ATCAA---------T-T-AAGTC-ATGCAACCATAAAACTAAA-TG--GTACGAAA-------------AGCACGAATGATA---ATATTTT-A-------------T-------------AACACGTGTATAGAAAATT-----A---A----GTCTAAATCCTCTTGGACGCATGCTTTTT----TATA-AGAAAAG-CCTCAGAA-AA--CAA---A-GCGTCCCTGGTGATCAAGAC-TGAAAAA--TCAGGAAAATTCCCAAGTTACGGACTTATCCGAAGTTATTC-GAT---T-TT-T-T-CCAATTTttactttaaaatataaaaagtacagtagaaaaagcacattaacttttttatacatcaactgataatacaaaaataccaatatattcaactttaaccatctaagattaaaaacaaatataatataatacccctacccccttttaaacttttttttgccaattttcgaaattgacatgttacaataattgtcctgacatcaaattataaaatataccatagaaaaagtatatcatccttttaaaacatcagctgacaatgtaaaaatactaatacatcaatctttcaccgtctaaaacttacaatattgtacccctaccaaatttcggatttttgcaaattttgacaatttaatagggtgttatgtttcaattagttagcctgatatcaaacctgatatcgagtactaggtacagcagaccaagcaaatgatccttcttactttatcttacttctaaaaaaactaatttttggtttacatcagccaatgtgtgcctgccatttttcagtatttagtctattcacaaacacattaccaacaagtcccttttttcttttcctaccaacacaatttaaatatcactagaaaggggcataagcaacatttatgcattgtaagactggaatttggaaaagcaacgtttctccgaccactctgagctgtctaacatgaagtttctacatttcaaaccagattaaggtaatcaaaacaggcaatcgtcattatcccacaatctttattctttaacaatatgaccacaggcatcacagtgatcaattaagtcatgcaaccataaaactaaatggtacgaaaagcacgaatgataatattttataacacgtgtatagaaaattaagtctaaatcctcttggacgcatgcttttttataagaaaagcctcagaaaacaaagcgtccctggtgatcaagactgaaaaatcaggaaaattcccaagttacggacttatccgaagttattcgattttttccaatttgtg
gi|30 : aggtattctatcaataatactcaatgttaaaaaactaaaaagactttttactttcattttccacattaaattctagattcaattccaaattttaggaacttttacccgtatatttcttcaattatagtgtattttataagcaaaccccatttctgtccaaggaacaacattctgactcgcgtctgtcatattcatcaggttattttttttattcatttcttacaaaacatatattgttatatatcagtaatagacaaaacaacggaaattacaaaaatggcaagaatatttaattacaggatctt---A----GTCTAGATCTTCTGCAGCGCTTGATTTTCAAGACTTAGAAAAAAA-ATTAGAAA-AA--C-A---A-GCGTCCCTAATGATCgtg
gi|4 : ATTCCATCCATAATACTCAATGTTTAAAAAC-TAAAA-AAAACACTTTTA-----T-TTT--CAACATTCAA---------TT-----CTGG-ATTTAATTCCAAATTTTTAGGAACTG---------------TTA------------------AA---GTAT---A-------------T---TT-TTCCGTT-T--G--G-------GGTGTA-A--TTTA-----------T-------AAGTATACCTC-----T-----TC------------------TCTGTCCAAAGTACTATATTCTG-TC---T-CAAGTCTGCTATATTCAT-TTGGTCAGGGTTT-TTT-T---TCGTTTCTTACAAAACATCTATTTTTATATTCTAGTAAGTAGACAAT-CAATGAAGATT-----------CGAATATGGCAATAATATTTTA--TTACAGGATCAG--AAAAA--AAAT-GTTTGTTAGATCTTCATATCCATAAATATC-ATAA---AACAGGCA-T-------TTTA--CTTGTC--AT--TTTAAAATATA-ACA-TATTGAAATTAATAATCCTGGCGTCAATTTCAAA--A---TG-----G----A---------------ACA------------GA--------------AG------------------AATATGTACTGTTTTTGCTACATTA-ACTGTTGATG-CAAAA---------ATACAAATATAATAAAAGTTTACCGTCTTAAATTAAAAACTAAT-AG-AAT--ATAA-TACCCCAA--CCC------TCTTTT-T---AACT---------TTT----GCCA---------ATTTT---------CGAATA-TTAACATG------T-------------CCTGACATCAGACTATAAAATATACCATA---GAAAAAGT-ATATCATCTTTCTTAAAACGTCAGTTGACAAT------G-TAAAAATACTAATATATCAAACTT--CTAAAACTTGAAA---------AAA-AA--A---------T---A--GAAT-A--TT---GTACCCCT----AC-----TTCATT-T-CGGC-TTTCCGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-CTTACAATTA-GCCTGATATCAACCTGATATCAAA------------TACT---AGGTAGATCTACAGGAGATCAATAGATTTA-TCTTTCTTACTATATACATTA-TA------TAGACTTTCT--TA----AAAA-A--A----AA---CTAATTTTGGGTTTACATCCGCCA----TTGT--G-----TGT-C-------TGCCA------------------TTTTACATTTTTTTGTCAATTCACAA-A-C-AAATAC---TTTTTCATT-T-C--CCAAACACAATTTAA--GTGT---CACTGGAAAGGGACATACAGCAACATTTAGGCGT-AGTAAGA--CTGGAGTCGGGAAAGTCAAC------G------------ATTC-T-C-CAGCCA-CACTCAGT----------TGAACATTCAACATTTTATTCCAGATTACGGTTATCA-AAAACAGGCAATCGTC-A---TTTTCCCACAATCTTTA-TCCTTTAACAATATGACCATCGA----------------------C---------------------AT--A-----------------------A-----------------------CAGTAATTAAGTGATTCATGCAACCGTAA--AACATTGTGTTT-G-AAGACGATTTATTCGTG-----AAA-TG--TCACGAAA-------------ACCACGA------------------------------------------------TCGTGTGTAGAAAATT---AAA---A----GTCTAAATCATTTCCGta
gi|5 : TA--TCC------CCTTTT-T---GACT---------TTT----GACA---------ATTTTGCCTGTTTCCGAATACTT----TT------TTAAAATACATTGTCCTGACATCAAAT-----AACATACCATA---AAAAAGGT-ATATCATCTTTCTTATTACATCAGCTGTTAAT------G-TAAAAGTACTAATATATCAAACTT--TCACCATCT-------------AAA-AC--TTGAAAAAAAT---A--GAAT-A--TT---GTTCCCCT----A------CCAATT-T-CGGC-TTTTTGCCAATTTTGCCAAT-TTTC---GGGTTTCA------T-CTTACAA-TA---------------TGTTATCAAA------------TACT---AGG------TATAGCAGATCAAGTTAATTA-TCTTTCTTACTATATCAATT-TT------CTAGACATTCATCTT----AAAACA--AAAAAAA---ATACTTTTGGGTTTACATCCGCCATTTTATGTTCGACATTTGT-CAGTATTTTGTCA------------------ATTCACAT-------ATAAATAAC-C-A-C-GATTCCCTTTATT--ATT-TCC--TC-AACACTATTTAA--ATGT---CACTTGAAAGGGCCATACAGCAACATATACATGT-AGTAAGA--CTGGAATCTGGAAAGTCAAC------G------------AATCTT-C-GA-CCA-CACTGAGCTGTC-TAACATGAACGTTCTACATTTTAACCCAGATTAAGGTTATCA-AATACAGGCAATCGCC-A---TTATCCCACACTCTTTATTTTTTTAAAAATAAAACCACCGA----------------------C---------------------AT--AATAGTGATCAGTAAATTCAAGCAA-----------------------CCGTA-----------------------A--AATATTGTGTTT-T-AAGACGATTTATTCGTG-----AAA-TG--TCACGATA-------------ATCACAAATGAAA---ATATTTTGG-------------T-------------AACTCGTGCGTAGAAAATT---AAA---A----GTCTAAATCATCTTCGGCGCAGGCTTTTT----CCGA-AGAAAAT-CCTAGGAATAG--C-A---A-GCATCCCACATGATCAAGAC-TAAAACA--TTAGGGTAATTCCCAAGTTACGGACTTATCCGAAGTTACCC-GA----T-TT-TCT-TTGATGTCGTTATGGA
gi|6 : tttatattgtacagttccgctacggatgttacagaaattcgtttctcaaccacatttgtgtagcttagccaaccata------A--A---TA-----G----A---------------A--------------AA--------------AG------------------CACATTAACT-TTTT-AATACATCC-ACTGATAATA-CAAAA---------TTACCAATATATTAAACATTTACCGTCTAAAATTAAAAACAAAT-AG-AAT--GTAA-TACCCCTA--CCC------CCTTTT-T---AACT---------TTT----GCCAGTTTTGCCAATTTT---------TGAATA-TTGACATG------TTACAATACGTTGTTCTGACATCAAATTATAAAATATACCATA---GAAAAAGT-ATAT-----------------CAGCTGACAAT------G-TAAAAATACTAATACATCAAACTT--TCACCATCTTAAACTTAAAAA-AAA-AT--T---------T---A--GAAT-A--TT---GTTCCCCT----AC-----CCCATT-T-TGAC-TTTTTGCCAATTTTGACAA--TTTCAAAGGGTTTCA------T-GTTACAATTA-G-------TTAGCCTGATATCAAG------------TACT---AGG------TACAGCAGATCAAGCAAATTA-TCCTTCTTACTATATCAGTTA-CA------TAGAC-TTCTT-------AAAA-A--ACAACAA---CTAATTTTGG---TGTGTC----------TGT--A-----T-T-T-------TGTCA------------------ATTCAAAT-------ACAAATTA----A-C-GAGTCCC--TTTTCCATTCCCC--CCAAACACAATTTAA--ATAT---CACTGGAGAGGGGTATACAGCAACATTTACACCT-AGTAAGA--CAGGAATTGGGAAAGTCAAT------G------------ATTC-TCC-GA-CCA-TACTGAGCTGTCTTAACATGAAAGTTCTACATTTTAACCCAGATTATGGTTATCA-AAAACAGGCAGTTGTG-A---TTATCCCACAATCTTTA-TTCTTTAACAATATGACAACGGA----------------------C---------------------AT--AACTGATCAATTAAGTTATGAA--A-----------------------CCGTA-----------------------A--AACATTGTGTTT-T-AATAATATTTATGCGCG-----AAA-TG--TCATGAAA-------------ATCACTAATGATA---ATATTTTTG-------------T-------------AACAGGTATGTAGAAAAAT---AAA---A----GTCTAAATCAACTTGGA-GTTTGCTTTTT----AATA-AGAAAAA-TCTAAAAA-AAACC-A---A-GCGTCTCAGATGATCAAGAC-TAAAAAA--TCAGGGGAATTCCAAAGTTGCAGACTTATCTGAAGTTACTT-GATTTTT-TT-T-T-CCGAATTTGTTAtcgaata
gi|7 : GCAA-AATATTTGACTTTACAGA--CA---AAATATTAA-T-GCAT--CAAACTTT--TACTCTCTAAAATTTATAATTGAAAGAGTA-TAATACCCTTTCGACTTTTCGTAAATTTTTGAATATTTATA-CGTTACAA---GTTGTCCTGACATCAA------ATAA---TAAAAGGTCCCGA---------------A--------------AA--------------AG------------------TTTATAAACG-TCCTTAGTGTATCA-GCTGACAATGACACAA---------ATATTAATATGTTAGACTTTAAC--TCTAAATTTTAAAA-AAAT--G-AAT--GTGC-CACCGTTAATCCCATTCGGCTTTTT-TTCCAA-----------TTT----GACA---------ATTTTT--------CGAATG-GTAACATAGCGGTATCACAATATGTTGTCCTGGTATAAAAT-ATAAAAAAAAAGATACAGGAGAAATTTATATTAATTTTCTTTGTACATCCGCTGAAAAT------G-C-----TACTAATATATGAAAATT--TTACCGTCT-------------AAA-ATGATG--------T---A--TAAT-T--TA---GGATCATT----ACGTGATCCCTTTCT-CGGCTTTTTTGCCAA------------------------CA------C-GTTACAGTTA-A-------TTATTCTTAAATCAAA------------TAAA---AGA------TAAAGTAAAgg
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatAAA---------ATATTAATGCATCAAACTTTTACTCTCTAAAATTTATAATTGAA-AG-AGT--ATAA-TACCC-----------------TTT-C---GACT---------TTTC---GTAA---------ATTTT---------TGAATA-TTTATACG------TTACAA---GTTGTCCTGACATCAAATAATAAAAGGTCCC------GAAAAAGT-TTATAAACGTCCTTAGTGTATCAGCTGACAAT------GACACAAATATTAATATGTTAGACTT--TAAC--TCT-------------AAA-TT--T---------TAAAA--AAATGA--AT---GTGCCACCGTTAAT-----CCCA-T-T-CGGCTTTTTTTCCAA-TTTGACAATTTTTCGAATGGTAACATAGCGGT-ATCACAATAT-G-------TTGTCCTGGTATAAAA------------TAaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|7 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacAACATA-GCGGTATCACAATATGTTGTCCTGGTAT-AA------A--A---TA-----T----A---------------A--------------AA--------------AAAAAGATACAGGAGAAATTTATATTAATT-TTCTTTGTACATCC-GCTGAAAATG-C--------------TACTAATATATGAAAATTTTACCGTCTAAAATGATGTATAATTTAG-GATC-AT---TACGTG-A--TCC------CTTTCT-C---GGCT---------TTTTT--GCCA---------A------------------------CACG------TTACAGTTAATTATTCTTAAATCAAAT---AAAAGATAAAGTA---AAAATGGT-GTATTCATTTTCTTTGTGGAACAGCTGAAAAT------T-CTAAAATATTAAAACGTTATACTT--TTACCATTT-------------AAA-ATG-T---------T---AACAAAT-AGGGTAAAGTACCTCT----A------CCCATT-TGTGGCTTTTTTGCAAAT----------TTTCGAATGGTAGCG------T-GTTACAATAA-G-------TTACCCTtaaaaaaaaagatacaggagaaatttatattaattttctttgtacatccgctgaaaatgctactaatatatgaaaattttaccgtctaaaatgatgtataatttaggatcattacgtgatccctttctcggcttttttgccaacacgttacagttaattattcttaaatcaaataaaagataaagtaaaaatggtgtattcattttctttgtggaacagctgaaaattctaaaatattaaaacgttatacttttaccatttaaaatgttaacaaatagggtaaagtacctctacccatttgtggcttttttgcaaattttcgaatggtagcgtgttacaataagttacccttgcat
gi|8 : gtattctcaacaaacaaacaaaattctcttgagaaaatatatcaatacaatgcaaaatatttgactttacagacaaaatattaatgcatcaaacttttactctctaaaatttataattgaaagagtataataccctttcgacttttcgtaaatttttgaatatttatacgttacaagttgtcctgacatcaaataataaaaggtcccgaaaaagtttataaacgtccttagtgtatcagctgacaatgacacaaatattaatatgttagactttaactctaaattttaaaaaaatgaatgtgccaccgttaatcccattcggctttttttccaatttgacaatttttcgaatggtTTA-----T-TTT--CA----T------------AA-----CCGACATT-------CAATTTT--CGA-------------------TTA------------------CA---TTCC---A-------------A---AT-CT----A-T--ACCG-------T----ATATTCTTT-----------T-----------------CGTG--T-----TTGCC---------------T--GTCCAAAGTGCAATACACCGCACGGATAAAAGCCCTCTATGTTCATGTTGG-TA---TTT-TTTGT-AAACATTTCTAACAAGTCGTATTTTGTTACATACAAGTTCGTAGCCAAAACATCGACTATTA----------CAATTA-GAAAATAATATTACA--AAACAGAAATAT--AAAAA--CA-T-GTATGATAGATTTTCATGTTCAATAACATC-ATTA---AATGG-------------TAA--CTTG--------------------------TTGTAGCAAGTAATCCTGGTAT--A------A--A---CA-----T----T---------------A--------------AA--------------AGT-----------------CACA--AA-----TTAAAAAAAACACATTAATAATG-CAAAG---------ATACTAACACGACACATTTTCGGCGTCTCCACTT-----TAATT-AG-AATAAATAA-TAATCTT-------------------------CC---------TTC----ACC----------ATTTT---------CGAACA-TT-ATATA------TAACAA-AAGTTATCCTGACATCAAGTAATAAAATGTACCCTA---GAAATTGT-TTATTAACTATCTTAGTAAATCATCTGAAAAT------G-TAAAAACAGTAATACATCAAACTG--GTACCATCT-------------AAA-AT--G---------T---A--tgcat
gi|9 : cCCATCCATAACA-------------AAC-TAAGA-AAA-C-TTTTTA-----C-TTT--CA---TTGTTCACATTAAATT-----CTGG-ATT-------AAATCCC--AAA-------------------TTTTTAGG-------------AACTTTTACTGTA-------------T---AT-TT----T-TTCA--GTTTTGGTG----T-A--TTTTATATGTATACAT-------A---------T-----C-----TT------------------T--GTCCTAAGTATAATATTTTG-AC---A-GAAGTCTGCCATATTCAG-TTGGTTA---TTT-TTT-T-ATTCATTCCTAATAAAACATCTGTTGTTATATATAAGTAAGCAGACAAAACATTGGAAATTA----------CAAATATGGCAAGAATATTTAA--TTACAGGATCAGA-AAAAA--AA-T-GTTTGTTAGATCTTCATATTCATTAATAGT-ATAA---AATAGGCATT-------TTTT--CTTGTC---C-TTTTAAAATATA-ATA-TATTGCAATACGTAATCCTGACATCAA------A--A---TA-----T----AAAACGTACAGTAGAAA--------------AA--------------AG------------------CATGTTAACT-TTTTTAATACATCA-ATTGATAATG-TAAAA---------GTACTAATATATTTAACTTTTACCGTCTAAAATTAAAAACAAAT-AGAAAA--ATAA-TACCCTTA--CCC------CCTTTT-T---AA-T---------TTT----GCCA---------ATTTA---------CGAATA-TTTACATG------TTACAATATGTTGTCCTGACATCAAATTATAAAATATACCATA---Gttgaaatgtaaattacaactgcttcatatttcatctgaccttcttgttttcatctcagtaaaacgctctgtctggactacagtcactgctatcaaacagatgtc
1 sequences could not be aligned to this reference sequence:
Unaligned ( gi|31 ): TATTGAACAGATCTGCCACGAACGTTGAGGACTGACATCGTTTCTCACCACATTTGTGTAATCTGGCCAACCGTAT