lowQualScore : 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
lowQualScore : 111 22222 000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000 1 44444444444444 888888888888888888888888888888888888888888888888888 55 22 4
lowQualScore : 1 2 4 666 4 22222 4 3 1 8 8 4 777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777777 0 2 11111111111111 0 00 888888888888888888888888888888888888888888888888888 6 999 8 55 3 6 6 33 0
lowQualScore : . . . ... . ..... . . . . . . .................................................................................................................................... . . .............. . .. ................................................... . ... . .. . . . .. .
lowQualScore : 0 4 4 333 4 88888 4 1 8 0 2 4 666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666666 8 2 77777777777777 1 99 444444444444444444444444444444444444444444444444444 0 666 3 00 0 0 0 00 0
consensus : AACAGTAAAAA-GAG--TA-ANTCAAGA-AGTAGGTTTTCATATTNATTAGAA-GTC------CCGNCACAATT-ACTGCTTNATA----ATAGACGTGTGGAAAA-GCATAATATATTGTATTTAAAAACACTTTTGGTANTCTTTGTAATCTGTCCTCTAAAGTTAA------TT-----TTA----TTACATTCCTAACGATGAA-T-TACCTGNATATCTTGAATAAAGAATTCGCTG--N-----CT-TTAGTAAATACGT-T--T---TATT-GGAGTT--ATA--ATTTCACCGNTATTTAACCACCTCCTNGATGTGTGTTTGAGCTAAA
Reference ( gi|1 ) : AACAATAAAGA-GAA--TA-ATTCATGA-AGTAGATTTTCACATTCATTAGAA-GTC------CCGCCGC--TC-ACTGTTTAATA----ACAGACGTGTGCAAAACGTGTAAGCTA--AGATTTGTTAACACTTTCTGTAACCTTT--------TCCTATAA---TAA------TT-----CCG----TTACATTCCAAATGATGAA-T-AACCAGCTTACCTTGAATAAAGAATTCGCTG--C-----TT-TTAATAGATGTGT-T--T---TAT---GAGTC--ATA--GTTTCATCACCAATT-CCCACCTCCTTGATGCGCGCATGAG-TAAAACAACACGACGTCATCAGCGT
gi|11 : AACAGTAAAAA-GAA--TG-AATCAAGA-AGTAGATTTTCATATTTATTAGAA-GTG------CCCCCA----T-ACTGCTTCATAATCTATAGACGTGTGAAACACATAT
gi|5 : aaAACAATAAAGA-GT---TA-AT-CAGGA-AGTAGATTTGAAAATTAATTAGAA-GTTTTTAAACCAACACAATA-ATAGTCTAATA------------GTG-AAAA-GCATAATATATTGTATTTAAAAACACTTTTGGTAGTCTTTGTAATCTGTCCTCCAAAGTTAA------TT-----TTAAATATTACATTCCATACGATGAATT-TACCTTCATATCTTGAATAAAGAATtaa
gi|4 : tAACAATAAAGA-GT---TA-AT-CAGGA-AGTAGATTTGAAAATTAATTAGAA-GTTTTTAAACCAACACAATA-ATAGTCTAATA------------GTG-AAAA-GCATAATATATTGTATTTAAAAACACTTTTGGTATTCTTTGTAATCTGTCCTCCAAAGTTAA------TT-----TTAAATATTACATTCCATACGATGAATT-TACCTTCATATCTTGAATAAAGAATat
gi|15 : atAACAGTAAAAA-GAG--TA-AAACAAGATGGTGG-TTTTCATATTTATTAGAA-GTC------CCG--GC--TT-ACTGCTat
gi|18 : atAACAGAAAAAA-TAG--TA-AATCAAGA-AGTAGGTTTTCATATTGATTAGAA-GTC------C
gi|17 : atACAGTAAAAAAGAG--TATATTAA-GA-AGTATATTTTCATATTCATTAGAATATC------CC
gi|19 : TAAAAA-GAG--TA-AATCAATA-TGTAGGTTT-CATATTTATTAGAA-GTC------Cc
gi|20 : taatggAAAAA-GAG--CA-AACCAAGA-AATAGGTTTTCATATTTATTAGAA-GTC------
gi|3 : aAAAA-GAAGTTA-AT-CA-AA-AATAGGTTTTCGTATTGAATAGAA-GTA------T-GCCCC--TTTACTGCTTCATG----ATAGACGTGTGGAAAA----TAA-TTA--AAGTTTATAAACACGTTTTGAAACCTTTAATTATTCTCCACTAA---GAA------TTAAAATTTG----T-ACATTCCTAATG-------------------TTTGAATATAGA--------------------TGATAAATGTGT-T--T---TAT---GATTTAGATATTATTTCACCGCCAAT
gi|14 : ggCTTATAA---TAT------TT-------A----TTACATTCCTAGAGATAAA-C-TACCTGGATATCTTGAATAAAGAATTTGCTG--A-----TT-T
gi|12 : agTATAA---TAACAAAACTT-----AC------TACATTCTTAATGATGAG-T-TACCAAGATATCTTCAAGAAAGAGTTTGTTG--A-----CT-TCAGTAAATAT-T-T--C---TA
gi|2 : tag----TTACATTCCCAACGATGAA-T-CACCTGGATATCTTGAATAAAGAATTCACTGAAT-----TTATTACTAAATATGT-T--TGACTATTGGGAGTT---TA--CTTTCactatgt
gi|6 : tattaaagagctatactatgtatgtaatagcaacacgttttgagtttttgttataatgattatttgaaggtgttaaattggtttta----TTACATTCTTAACGGTGTA-T-TACAAACACATCTTCAATAAATAATTCACTG--A-----CT-TTAGTAAAT-CAT-TAAC---TACTTGGAGTT---TA--ATTTCACCGGTATTTAACTACCTCCTGGATGTGTGTTTGAGCTAAAtccggtaattaacttcattttgtatcttctaaattttgtttggagcatatataggtgatatatcagtatcagtaatgttttaatttataaaatacaatata
gi|9 : aTACATTCTCAATGATGAA-T-TATCTATATATCTTAAA-AAAGAAATTACTGA-CACATATT-TT--TATGTTTGTAT--T---TAA---AAGT---ATA--ATTTTACCAggtcctcaccaacgtcagtatgtacattgtatatacaatgta
gi|8 : CATTCATAACGATTAG-TTAACAAGAT-ATTTTCATTAAAGAATTCGCTA--T-----CT-TAAGTAAATACAT-T--T---T-------------TA---TTTCACCGATATTTAACCACCTCCTTGATgtatttaact
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|7 ): ACATTTCTTACGATGAATTACTTACATATACATGTATTTAATGAAAAAAATACCGAATTTTAGAAAAAAAACATTTTAACTACTTGGAGTATAATTTCACTTGTATTTAA
Unaligned ( gi|10 ): TATTGACTTACTGCTTACACGGGTATCCAACTACCTCCTGGACCCGTATTTGATAATACTGACGTCGTCAACGTCAATTTATTGTATACAATACAATATGA
Unaligned ( gi|13 ): TAATGACAAATTACCTGTATATCTCGAATAAAAATTACTGACTTCCACAAAATGTTTTTAACTACTGAGAGTATAATT
Unaligned ( gi|16 ): AATTTTGCCAGTTTTGAATTACCTCCTTGATCTGTGCTTGGGCAAAATGGTATCACCAACAT
Alignments
lowQualScore : 3333333333333333333 333333333333333 11111 111 2222222 222222 2222222222222 111111111111111111 5555555555555555555555555 2222222222
lowQualScore : 2 4 0 1 4 1 4 9999999999999999999 2 1 000000000000000 00000 3 555 5 0 55 8 1 1 55 1 6666666 111111 6 7777777777777 6 666 3 88888 44 66 888888888888888888 66 6666666666666666666666666 1 3333333333 1 9 8 2
lowQualScore : . . . . . . . ................... . . ............... ..... . ... . . .. . . . .. . ....... ...... . ............. . ... . ..... .. .. .................. .. ......................... . .......... . . . .
lowQualScore : 3 0 3 0 0 0 0 2222222222222222222 2 0 444444444444444 22222 2 000 6 8 44 0 0 0 88 0 0000000 000000 7 1111111111111 7 777 3 33333 66 22 333333333333333333 99 3333333333333333333333333 0 5555555555 0 3 0 5
consensus : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---C------CCGNCAC--TNACTGCTTAATA----ATAGACGTGTGGAAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCTAA-AG---TT-AA-----T-TT----TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGAC------T---TTAG--TAAATACGTT--T-----TA-----TT--G-GAGTTA-TAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
Reference ( family-280 ) : AACAGTAAAAA-GAGTAANTCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---C------CCGNCACAATTACTGCTTNATA----ATAGACGTGTGGAAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTANTCTTTGTAAT--C-TG-TCCTCTAA-AG---TT-AA-----T-TT----TATTACATTCCTAACGATGAA-TTACCTGNATAT-C-----TTGAAT--AAAGAATTCGCTGNC------T---TTAG--TAAATACGTT--T-----TA-----TT--G-GAGTTA-TAATTTCACCGNTATTTAAC---------CACCTCCTNGATGTGTGTTT-GAGCTAAA
gi|1 : AACAATAAAGA-GAATAATTCATGA-AGTAGATTTTCACATTCATTAGAA-GT---C------CCGCCGC--TCACTGTTTAATA----ACAGACGTGTGCAAAACGT-GTAAGCTA---AGATTTGTTAACAC-TTTCTGTAACCTTT------------TCCTATAA-------T-AA-----T-TC----CGTTACATTCCAAATGATGAA-TAACCAGCTTAC-C-----TTGAAT--AAAGAATTCGCTGCT------T---TTAA--TAGATGTGTT--T-----TA-----T-----GAGTCA-TAGTTTCATCACCAATT-CC---------CACCTCCTTGATGCGCGCAT-GAG-TAAA
gi|10 : -----TA-----TT--G--ACTTACTGCTTACACGGGTATCCAAC---------TACCTCCTGGACCCGTATTT-GAacaacacgacgtcatcagcgt
gi|11 : AACAGTAAAAA-GAATGAATCAAGA-AGTAGATTTTCATATTTATTAGAA-GT---G------CCCCCA----TACTGCTTCATAATCTATAGACGTGT-GAAAC-AC-ATATTAtaatactgacgtcgtcaacgtcaatttattgtatacaatacaatatga
gi|12 : aaT----TACTACATTCTTAATGATGAG-TTACCAAGATAT-C-----TTCAAG--AAAGAGTTTGTTGAC------T---TCAG--TAAATAa
gi|13 : tagtataataacaaaacTAATGACAAA-TTACCTGTATAT-C-----TCGAAT--AAA-AATT-ACTGAC------T---TCCA--CAAA-ATGTT--TTTAACTA-----CT--GAGAG-TA-TAATTtttctaactatgt
gi|14 : T-AA-----TATT----TATTACATTCCTAGAGATAAA-CTACCTGGATAT-C-----TTGAAT--AAAGAATTTGCTGAT------T---T
gi|15 : agcttaAACAGTAAAAA-GAGTAAAACAAGATGGT-GGTTTTCATATTTATTAGAA-GT---C------CCGGC----TTACTGCT
gi|16 : atAATTTTGCCAGTTTTGAAT---------TACCTCCTTGATCTGTGCTT-GGGCAAAA
gi|17 : ACAGTAAAAAAGAGTATATTAAGA-AGTATATTTTCATATTCATTAGAATAT---C------CCtggtatcaccaacat
gi|18 : AACAGAAAAAA-TAGTAAATCAAGA-AGTAGGTTTTCATATTGATTAGAA-GT---C------Cc
gi|19 : atAATGGTAAAAA-GAGTAAATCAATA-TGTAGG-TTTCATATTTATTAGAA-GT---C------C
gi|2 : tAAGA-GCTATACTATGTATGTAAT-AGCAACACGTTTTG--AGTTTTTGTTAT--AATGATTATTTGA-AGGTGTT-AAATTGGT-TT----TATTACATTCCCAACGATGAA-TCACCTGGATAT-C-----TTGAAT--AAAGAATTCACTGAA------TTTATTAC--TAAATATGTT--TGAC--TA-----TTG-G-GAGTT--TACTTTCTCCGGTAATTAACTTCATTTTGTATCTTCTAAAT-TTTGTTTGGAGC
gi|20 : tattaAAAAA-GAGCAAACCAAGA-AATAGGTTTTCATATTTATTAGAA-GT---C------atatataggtgatatatcagtatcagtaatgttttaatttataaaatacaatata
gi|3 : aAAAAG-AAGTTAATCAAAA-A-TAGGTTTTCGTATTGAATAGAA-GTATGC------CCCT-----TTACTGCTTCATG----ATAGACGTGTGGAAA-----ATAAT-TAA-AG--TTTATAAACAC-GTTTTGAAACCTT--TAATTAT-TC-TCCACTAAGAA---TTAAA-----A-TT----TG-TACATTCCTAATG-------------------T-----TTGAAT--ATAGA------TGA-----------------TAAATGTGTT--T-----TATGAT-TT--A-GA--TA-TTATTTCACCGCCA
gi|4 : ggAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT---TTTTAAACCAACACAATAATAGTCTAATA----GT---------GAAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTATTCTTTGTAAT--C-TG-TCCTCCAA-AG---TT-AA-----T-TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATat
gi|5 : atAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT---TTTTAAACCAACACAATAATAGTCTAATA----GT---------GAAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCCAA-AG---TT-AA-----T-TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATat
gi|6 : tATTACATTCTTAACGGTGTA-TTACAAACACAT-C-----TTCAAT--AAATAATTCACTGAC------T---TTAG--TAAAT-CATTAAC-----TAC----TT--G-GAGTT--TAATTTCACCGGTATTTAAC---------TACCTCCTGGATGTGTGTTT-GAGCTAAAat
gi|7 : ACATTTCTTACGATGAA-TTACTTACATATACATGTATTTAATGAAAAAAATAC-CGAAT------T---TTAGAAAAAAAACATT--T-----TAACTACTT--G-GAG-TA-TAATTTCACTTGTATTTAAggtcctcaccaacgtcagtatgtacattgtatatacaatgta
gi|8 : CATTCATAACGATTAG-TTAACAAGATAT-T-----TTCATT--AAAGAATTCGCTATC------T---TAAG--TAAATACATT--T-----T------T--------------ATTTCACCGATATTTAAC---------CACCTCCTTGATATAT
gi|9 : TACATTCTCAATGATGAA-TTATCTATATAT-C-----TTAAA---AAAGAAATTACTGACACATATT---TT--------TATGTT--TG----TA-----TTTAA-AAG-TA-TAATTTTACCAGTATTTAAC---------
Alignments
lowQualScore : 2222222 1111 22222 1 11111 111 2222222 222222 2222222222222 11111111111111111 5555555555555555555555555 222222222
lowQualScore : 2 4 0 4 1 4 8888 8888888 7 888 7777 1 55555 5 00000 3 555 5 0 22 8 1 1 55 1 6666666 111111 6 7777777777777 6 777 3 88888 44 66 77777777777777777 66 6666666666666666666666666 222222222 1 1 8 2
lowQualScore : . . . . . . .... ....... . ... .... . ..... . ..... . ... . . .. . . . .. . ....... ...... . ............. . ... . ..... .. .. ................. .. ......................... ......... . . . .
lowQualScore : 3 0 3 0 0 0 5555 5555555 3 555 0000 4 44444 0 22222 2 000 6 8 00 0 0 4 88 0 0000000 000000 7 1111111111111 7 777 3 33333 66 22 33333333333333333 99 3333333333333333333333333 999999999 0 0 0 5
consensus : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT----CCCNN-ACTNACTGCTTAATA----ATAGACTAGTAGTGGAAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCTAA-AG---TT-AA-----T-TT----TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGAC------T---TTAG--TAAATACGTT--T-----TA-----TT--G-GAGTTA-TAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
Reference ( family-280 ) : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT----CCCGNCACTNACTGCTTAATA----ATAGAC--GT-GTGGAAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCTAA-AG---TT-AA-----T-TT----TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGAC------T---TTAG--TAAATACGTT--T-----TA-----TT--G-GAGTTA-TAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
gi|1 : AACAATAAAGA-GAATAATTCATGA-AGTAGATTTTCACATTCATTAGAA-GT----CCCGCCGCTCACTGTTTAATA----ACAGAC--GT-GTGCAAAACGT-GTAAGCTA---AGATTTGTTAACAC-TTTCTGTAACCTTT------------TCCTATAA-------T-AA-----T-TC----CGTTACATTCCAAATGATGAA-TAACCAGCTTAC-C-----TTGAAT--AAAGAATTCGCTGCT------T---TTAA--TAGATGTGTT--T-----TA-----T-----GAGTCA-TAGTTTCATCACCAATT-CC---------CACCTCCTTGATGCGCGCAT-GAG-TAAA
gi|10 : -----TA-----TT--G--ACTTACTGCTTACACGGGTATCCAAC---------TACCTCCTGGACCCGTATTT-GAacaacacgacgtcatcagcgt
gi|11 : AACAGTAAAAA-GAATGAATCAAGA-AGTAGATTTTCATATTTATTAGAA-GT----GCCCCCA--TACTGCTTCATAATCTATAGAC--GT-GT-GAAAC-AC-ATATTAtaatactgacgtcgtcaacgtcaatttattgtatacaatacaatatga
gi|12 : aaT----TACTACATTCTTAATGATGAG-TTACCAAGATAT-C-----TTCAAG--AAAGAGTTTGTTGAC------T---TCAG--TAAATAa
gi|13 : tagtataataacaaaacTAATGACAAA-TTACCTGTATAT-C-----TCGAAT--AAA-AATT-ACTGAC------T---TCCA--CAAA-ATGTT--TTTAACTA-----CT--GAGAG-TA-TAATTtttctaactatgt
gi|14 : T-AA-----TATT----TATTACATTCCTAGAGATAAA-CTACCTGGATAT-C-----TTGAAT--AAAGAATTTGCTGAT------T---T
gi|15 : agcttaAACAGTAAAAA-GAGTAAAACAAGATGGT-GGTTTTCATATTTATTAGAA-GT----CCCGG--CTTACTGCT
gi|16 : atAATTTTGCCAGTTTTGAAT---------TACCTCCTTGATCTGTGCTT-GGGCAAAA
gi|17 : ACAGTAAAAAAGAGTATATTAAGA-AGTATATTTTCATATTCATTAGAATAT----CCCtggtatcaccaacat
gi|18 : AACAGAAAAAA-TAGTAAATCAAGA-AGTAGGTTTTCATATTGATTAGAA-GT----CCc
gi|19 : atAATGGTAAAAA-GAGTAAATCAATA-TGTAGG-TTTCATATTTATTAGAA-GT----CC
gi|2 : tAAGA-GCTATACTATGTATGTAAT-AGCAACACGTTTTG--AGTTTTTGTTAT--AATGATTATTTGA-AGGTGTT-AAATTGGT-TT----TATTACATTCCCAACGATGAA-TCACCTGGATAT-C-----TTGAAT--AAAGAATTCACTGAA------TTTATTAC--TAAATATGTT--TGAC--TA-----TTG-G-GAGTT--TACTTTCTCCGGTAATTAACTTCATTTTGTATCTTCTAAATTT-TGTTTGGAGC
gi|20 : tattaAAAAA-GAGCAAACCAAGA-AATAGGTTTTCATATTTATTAGAA-GT----Catatataggtgatatatcagtatcagtaatgttttaatttataaaatacaatata
gi|3 : aAAAAG-AAGTTAATCAAAA-A-TAGGTTTTCGTATTGAATAGAA-GTATGCCCC----TTTACTGCTTCATG----ATAGAC--GT-GTGGAAA-----ATAAT-TAA-AG--TTTATAAACAC-GTTTTGAAACCTT--TAATTAT-TC-TCCACTAAGAA---TTAAA-----A-TT----TG-TACATTCCTAATG-------------------T-----TTGAAT--ATAGA------TGA-----------------TAAATGTGTT--T-----TATGAT-TT--A-GA--TA-TTATTTCACCG
gi|4 : ggAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT----TTTTAAACCAAC-AC--AATA----ATAGTCTAATAGTG-AAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTATTCTTTGTAAT--C-TG-TCCTCCAA-AG---TT-AA-----T-TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATccaat
gi|5 : atAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT----TTTTAAACCAAC-AC--AATA----ATAGTCTAATAGTG-AAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCCAA-AG---TT-AA-----T-TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATat
gi|6 : tATTACATTCTTAACGGTGTA-TTACAAACACAT-C-----TTCAAT--AAATAATTCACTGAC------T---TTAG--TAAAT-CATTAAC-----TAC----TT--G-GAGTT--TAATTTCACCGGTATTTAAC---------TACCTCCTGGATGTGTGTTT-GAGCTAAAat
gi|7 : ACATTTCTTACGATGAA-TTACTTACATATACATGTATTTAATGAAAAAAATAC-CGAAT------T---TTAGAAAAAAAACATT--T-----TAACTACTT--G-GAG-TA-TAATTTCACTTGTATTTAAggtcctcaccaacgtcagtatgtacattgtatatacaatgta
gi|8 : CATTCATAACGATTAG-TTAACAAGATAT-T-----TTCATT--AAAGAATTCGCTATC------T---TAAG--TAAATACATT--T-----T------T--------------ATTTCACCGATATTTAAC---------CACCTCCTTGAT
gi|9 : TACATTCTCAATGATGAA-TTATCTATATAT-C-----TTAAA---AAAGAAATTACTGACACATATT---TT--------TATGTT--TG----TA-----TTTAA-AAG-TA-TAATTTTACCAGTATTTAAC---------Tatat
Alignments
lowQualScore : 111 33333333 1111 33333 22 11111 111 2222222 222222 2222222222222 11111111111111111 5555555555555555555555555 222222222
lowQualScore : 2 4 0 4 1 4 111 55555555 7 888 7777 1 88888 33 00000 3 555 5 0 22 8 1 1 55 1 6666666 111111 6 7777777777777 6 777 3 88888 44 66 77777777777777777 66 6666666666666666666666666 222222222 1 1 8 2
lowQualScore : . . . . . . ... ........ . ... .... . ..... .. ..... . ... . . .. . . . .. . ....... ...... . ............. . ... . ..... .. .. ................. .. ......................... ......... . . . .
lowQualScore : 3 0 3 0 0 0 000 33333333 3 555 0000 4 44444 00 22222 2 000 6 8 00 0 0 4 88 0 0000000 000000 7 1111111111111 7 777 3 33333 66 22 33333333333333333 99 3333333333333333333333333 999999999 0 0 0 5
consensus : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---CCCNN-A-CTNACTGCTTAATA----ATAGACTAGTAGTG-GAAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCTAA-AG---TT-AA-----T-TT----TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGAC------T---TTAG--TAAATACGTT--T-----TA-----TT--G-GAGTTA-TAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
Reference ( family-280 ) : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---CCCNN-A-CTNACTGCTTAATA----ATAGACTAGTAGTG-GAAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCTAA-AG---TT-AA-----T-TT----TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGAC------T---TTAG--TAAATACGTT--T-----TA-----TT--G-GAGTTA-TAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
gi|1 : AACAATAAAGA-GAATAATTCATGA-AGTAGATTTTCACATTCATTAGAA-GT---CCCGCCG-CTCACTGTTTAATA----ACAGAC--GT-GTG-CAAAACGT-GTAAGCTA---AGATTTGTTAACAC-TTTCTGTAACCTTT------------TCCTATAA-------T-AA-----T-TC----CGTTACATTCCAAATGATGAA-TAACCAGCTTAC-C-----TTGAAT--AAAGAATTCGCTGCT------T---TTAA--TAGATGTGTT--T-----TA-----T-----GAGTCA-TAGTTTCATCACCAATT-CC---------CACCTCCTTGATGCGCGCAT-GAG-TAAA
gi|10 : -----TA-----TT--G--ACTTACTGCTTACACGGGTATCCAAC---------TACCTCCTGGACCCGTATTT-GAacaacacgacgtcatcagcgt
gi|11 : AACAGTAAAAA-GAATGAATCAAGA-AGTAGATTTTCATATTTATTAGAA-GTG--CCCCC-A---TACTGCTTCATAATCTATAGAC-----GTGTGAAAC-AC-ATATTAtaatactgacgtcgtcaacgtcaatttattgtatacaatacaatatga
gi|12 : aaT----TACTACATTCTTAATGATGAG-TTACCAAGATAT-C-----TTCAAG--AAAGAGTTTGTTGAC------T---TCAG--TAAATAa
gi|13 : tagtataataacaaaacTAATGACAAA-TTACCTGTATAT-C-----TCGAAT--AAA-AATT-ACTGAC------T---TCCA--CAAA-ATGTT--TTTAACTA-----CT--GAGAG-TA-TAATTtttctaactatgt
gi|14 : T-AA-----TATT----TATTACATTCCTAGAGATAAA-CTACCTGGATAT-C-----TTGAAT--AAAGAATTTGCTGAT------T---T
gi|15 : agcttaAACAGTAAAAA-GAGTAAAACAAGATGGT-GGTTTTCATATTTATTAGAA-GT---CCCGG---CTTACTGCT
gi|16 : atAATTTTGCCAGTTTTGAAT---------TACCTCCTTGATCTGTGCTT-GGGCAAAA
gi|17 : ACAGTAAAAAAGAGTATATTAAGA-AGTATATTTTCATATTCATTAGAATAT---CCCtggtatcaccaacat
gi|18 : AACAGAAAAAA-TAGTAAATCAAGA-AGTAGGTTTTCATATTGATTAGAA-GT---CCc
gi|19 : atAATGGTAAAAA-GAGTAAATCAATA-TGTAGG-TTTCATATTTATTAGAA-GT---CC
gi|2 : tAAGA-GCTATACTATGTATGTAAT-AGCAACACGTTTTG--AGTTTTTGTTAT--AATGATTATTTGA-AGGTGTT-AAATTGGT-TT----TATTACATTCCCAACGATGAA-TCACCTGGATAT-C-----TTGAAT--AAAGAATTCACTGAA------TTTATTAC--TAAATATGTT--TGAC--TA-----TTG-G-GAGTT--TACTTTCTCCGGTAATTAACTTCATTTTGTATCTTCTAAATTT-TGTTTGGAGC
gi|20 : tattaAAAAA-GAGCAAACCAAGA-AATAGGTTTTCATATTTATTAGAA-GT---Catatataggtgatatatcagtatcagtaatgttttaatttataaaatacaatata
gi|3 : aAAAAG-AAGTTAATCAAAA-A-TAGGTTTTCGTATTGAATAGAA-GTATGCCCCT----TTACTGCTTCATG----ATAGAC--GT-GTG-GAAA-----ATAAT-TAA-AG--TTTATAAACAC-GTTTTGAAACCTT--TAATTAT-TC-TCCACTAAGAA---TTAAA-----A-TT----TG-TACATTCCTAATG-------------------T-----TTGAAT--ATAGA------TGA-----------------TAAATGTGTT--T-----TATGAT-TT--A-GA--TA-TTATTTCACCG
gi|4 : ggAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT---TTTTA-AACCAAC-AC--AATA----ATAGTCTAATAGTG--AAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTATTCTTTGTAAT--C-TG-TCCTCCAA-AG---TT-AA-----T-TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATccaat
gi|5 : atAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT---TTTTA-AACCAAC-AC--AATA----ATAGTCTAATAGTG--AAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCCAA-AG---TT-AA-----T-TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATat
gi|6 : tATTACATTCTTAACGGTGTA-TTACAAACACAT-C-----TTCAAT--AAATAATTCACTGAC------T---TTAG--TAAAT-CATTAAC-----TAC----TT--G-GAGTT--TAATTTCACCGGTATTTAAC---------TACCTCCTGGATGTGTGTTT-GAGCTAAAat
gi|7 : ACATTTCTTACGATGAA-TTACTTACATATACATGTATTTAATGAAAAAAATAC-CGAAT------T---TTAGAAAAAAAACATT--T-----TAACTACTT--G-GAG-TA-TAATTTCACTTGTATTTAAggtcctcaccaacgtcagtatgtacattgtatatacaatgta
gi|8 : CATTCATAACGATTAG-TTAACAAGATAT-T-----TTCATT--AAAGAATTCGCTATC------T---TAAG--TAAATACATT--T-----T------T--------------ATTTCACCGATATTTAAC---------CACCTCCTTGAT
gi|9 : TACATTCTCAATGATGAA-TTATCTATATAT-C-----TTAAA---AAAGAAATTACTGACACATATT---TT--------TATGTT--TG----TA-----TTTAA-AAG-TA-TAATTTTACCAGTATTTAAC---------Tatat
Alignments
lowQualScore : 111 33333333 1111 33333 22 11111 111 2222222 222222 2222222222222 11111111111111111 5555555555555555555555555 222222222
lowQualScore : 2 4 0 4 1 4 111 55555555 7 888 7777 1 88888 33 00000 3 555 5 0 22 8 1 1 55 1 6666666 111111 6 7777777777777 6 777 3 88888 44 66 77777777777777777 66 6666666666666666666666666 222222222 1 1 8 2
lowQualScore : . . . . . . ... ........ . ... .... . ..... .. ..... . ... . . .. . . . .. . ....... ...... . ............. . ... . ..... .. .. ................. .. ......................... ......... . . . .
lowQualScore : 3 0 3 0 0 0 000 33333333 3 555 0000 4 44444 00 22222 2 000 6 8 00 0 0 4 88 0 0000000 000000 7 1111111111111 7 777 3 33333 66 22 33333333333333333 99 3333333333333333333333333 999999999 0 0 0 5
consensus : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---CCCNN-A-CTNACTGCTTAATA----ATAGACTAGTAGTG-GAAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCTAA-AG---TT-AA-----T-TT----TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGAC------T---TTAG--TAAATACGTT--T-----TA-----TT--G-GAGTTA-TAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
Reference ( family-280 ) : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---CCCNN-A-CTNACTGCTTAATA----ATAGACTAGTAGTG-GAAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCTAA-AG---TT-AA-----T-TT----TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGAC------T---TTAG--TAAATACGTT--T-----TA-----TT--G-GAGTTA-TAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
gi|1 : AACAATAAAGA-GAATAATTCATGA-AGTAGATTTTCACATTCATTAGAA-GT---CCCGCCG-CTCACTGTTTAATA----ACAGAC--GT-GTG-CAAAACGT-GTAAGCTA---AGATTTGTTAACAC-TTTCTGTAACCTTT------------TCCTATAA-------T-AA-----T-TC----CGTTACATTCCAAATGATGAA-TAACCAGCTTAC-C-----TTGAAT--AAAGAATTCGCTGCT------T---TTAA--TAGATGTGTT--T-----TA-----T-----GAGTCA-TAGTTTCATCACCAATT-CC---------CACCTCCTTGATGCGCGCAT-GAG-TAAA
gi|10 : -----TA-----TT--G--ACTTACTGCTTACACGGGTATCCAAC---------TACCTCCTGGACCCGTATTT-GAacaacacgacgtcatcagcgt
gi|11 : AACAGTAAAAA-GAATGAATCAAGA-AGTAGATTTTCATATTTATTAGAA-GTG--CCCCC-A---TACTGCTTCATAATCTATAGAC-----GTGTGAAAC-AC-ATATTAtaatactgacgtcgtcaacgtcaatttattgtatacaatacaatatga
gi|12 : aaT----TACTACATTCTTAATGATGAG-TTACCAAGATAT-C-----TTCAAG--AAAGAGTTTGTTGAC------T---TCAG--TAAATAa
gi|13 : tagtataataacaaaacTAATGACAAA-TTACCTGTATAT-C-----TCGAAT--AAA-AATT-ACTGAC------T---TCCA--CAAA-ATGTT--TTTAACTA-----CT--GAGAG-TA-TAATTtttctaactatgt
gi|14 : T-AA-----TATT----TATTACATTCCTAGAGATAAA-CTACCTGGATAT-C-----TTGAAT--AAAGAATTTGCTGAT------T---T
gi|15 : agcttaAACAGTAAAAA-GAGTAAAACAAGATGGT-GGTTTTCATATTTATTAGAA-GT---CCCGG---CTTACTGCT
gi|16 : atAATTTTGCCAGTTTTGAAT---------TACCTCCTTGATCTGTGCTT-GGGCAAAA
gi|17 : ACAGTAAAAAAGAGTATATTAAGA-AGTATATTTTCATATTCATTAGAATAT---CCCtggtatcaccaacat
gi|18 : AACAGAAAAAA-TAGTAAATCAAGA-AGTAGGTTTTCATATTGATTAGAA-GT---CCc
gi|19 : atAATGGTAAAAA-GAGTAAATCAATA-TGTAGG-TTTCATATTTATTAGAA-GT---CC
gi|2 : tAAGA-GCTATACTATGTATGTAAT-AGCAACACGTTTTG--AGTTTTTGTTAT--AATGATTATTTGA-AGGTGTT-AAATTGGT-TT----TATTACATTCCCAACGATGAA-TCACCTGGATAT-C-----TTGAAT--AAAGAATTCACTGAA------TTTATTAC--TAAATATGTT--TGAC--TA-----TTG-G-GAGTT--TACTTTCTCCGGTAATTAACTTCATTTTGTATCTTCTAAATTT-TGTTTGGAGC
gi|20 : tattaAAAAA-GAGCAAACCAAGA-AATAGGTTTTCATATTTATTAGAA-GT---Catatataggtgatatatcagtatcagtaatgttttaatttataaaatacaatata
gi|3 : aAAAAG-AAGTTAATCAAAA-A-TAGGTTTTCGTATTGAATAGAA-GTATGCCCCT----TTACTGCTTCATG----ATAGAC--GT-GTG-GAAA-----ATAAT-TAA-AG--TTTATAAACAC-GTTTTGAAACCTT--TAATTAT-TC-TCCACTAAGAA---TTAAA-----A-TT----TG-TACATTCCTAATG-------------------T-----TTGAAT--ATAGA------TGA-----------------TAAATGTGTT--T-----TATGAT-TT--A-GA--TA-TTATTTCACCG
gi|4 : ggAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT---TTTTA-AACCAAC-AC--AATA----ATAGTCTAATAGTG--AAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTATTCTTTGTAAT--C-TG-TCCTCCAA-AG---TT-AA-----T-TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATccaat
gi|5 : atAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT---TTTTA-AACCAAC-AC--AATA----ATAGTCTAATAGTG--AAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCCAA-AG---TT-AA-----T-TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATat
gi|6 : tATTACATTCTTAACGGTGTA-TTACAAACACAT-C-----TTCAAT--AAATAATTCACTGAC------T---TTAG--TAAAT-CATTAAC-----TAC----TT--G-GAGTT--TAATTTCACCGGTATTTAAC---------TACCTCCTGGATGTGTGTTT-GAGCTAAAat
gi|7 : ACATTTCTTACGATGAA-TTACTTACATATACATGTATTTAATGAAAAAAATAC-CGAAT------T---TTAGAAAAAAAACATT--T-----TAACTACTT--G-GAG-TA-TAATTTCACTTGTATTTAAggtcctcaccaacgtcagtatgtacattgtatatacaatgta
gi|8 : CATTCATAACGATTAG-TTAACAAGATAT-T-----TTCATT--AAAGAATTCGCTATC------T---TAAG--TAAATACATT--T-----T------T--------------ATTTCACCGATATTTAAC---------CACCTCCTTGAT
gi|9 : TACATTCTCAATGATGAA-TTATCTATATAT-C-----TTAAA---AAAGAAATTACTGACACATATT---TT--------TATGTT--TG----TA-----TTTAA-AAG-TA-TAATTTTACCAGTATTTAAC---------Tatat
blockSeqs : A A T T T ATG TAAACCA T TTC ATCT A TAATA TG AGCT A TAT T GC G A G TG T AATGA AGGTG A ATTGGTTT T AAG A ATGTA GA TG CACATATTTT AA TTAACTACTGAGAGTA TTCATTTTG G C G C
blockSeqs : A . . T . G TAAACCA T TTC . A TAATA G CAC A AA T TA . T A TG A TATTC GAA . TTTTAAA T TGT . . . TG ATTTATTAC . TAACTACTTGGAGTA . T C . C
blockSeqs : A . . C . . GGCTT T A . T GT . AGC A TT T AA . T T TG A CTG AG . TTTTAAA . TGG . . . CA TTTTAGAA . GACTATTGGGAGTT . A T . C
blockSeqs : A . . G . . CCAT . A . T . . AGC A TT . AA . . G . A CTG AG . TATT . TGG . . . CA CTTCAG . TATGATTTAGATA . G G .
blockSeqs : A . . T . . CTTT . . . . ATT . TTC . . . CG CTTCCA . GTATTTAAAAGTA . T
blockSeqs : A . . T . . . TTC . . . TA CTTTAG . TATTGACTTAC .
blockSeqs : A . . G . . . AAC . . . A CTTAAG . TACTTGGAGTT
blockSeqs : . . . A . . . TAC . . . C . TT
blockSeqs : . . . A . . . AAG . . . .
blockSeqs : . TAT . . .
blockSeqs : . . . . .
blockSeqCons : CGGCCN** A** GT*** ** AGC** TT* TG NATG*** AG**** TTTT********* TATATTTGGAGTA************
originalCons : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---CCCNN-A-CTNACTGCTTAATA----ATAGACTAGTAGTG-GAAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAAT--C-TG-TCCTCTAA-AG---TT-AA-----T-TT----TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGAC------T---TTAG--TAAATACGTT--T-----TA-----TT--G-GAGTTA-TAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
finalCons : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---CCCCGGCCN--ACTGCA--ATA----ATAGACGT---GTG--AAAAGC--ATAATATATT-GTATTTANAAACAC-TTTTGGTAGTCTTTGTAATNATG---TCCTCTAAAG----TT-AATTTT---------TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGAC------T---TTAG--TAAATACGTT--TTATATTTGGAGTA------------TAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
Alignments
lowQualScore : 111 3333333333333333 1111 22222 1111 111 333333 222222 11111 222 4444444444444444444 222222222
lowQualScore : 2 4 0 4 1 4 111 3333333333333333 7777 1 55555 6 1111 3 555 5 0 22 8 1 1 55 1 111111 111111 33333 000 6 777 3 88888 44 66 77777 333 8888 4444444444444444444 55 0 222222222 1 1 8 2
lowQualScore : . . . . . . ... ................ .... . ..... . .... . ... . . .. . . . .. . ...... ...... ..... ... . ... . ..... .. .. ..... ... .... ................... .. . ......... . . . .
lowQualScore : 3 0 3 0 0 0 000 7777777777777777 0000 4 44444 7 2222 2 000 6 8 00 0 0 4 88 0 000000 000000 77777 000 7 777 3 33333 66 22 66666 444 4444 0000000000000000000 55 8 999999999 0 0 0 5
consensus : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---CCC-CAG-CTNACTGCTTAATA----ATAGACTAGTAGTG-AAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAATCA-TG-TCCTCTAA-AG---TTAA--T--TTT---TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGACT---TTAGTAAATA--CGTTTT--A--T-ACTTG-------GAGT-ATAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
Reference ( family-280 ) : AACAGTAAAAA-GAGTAAATCAAGA-AGTAGGTTTTCATATTNATTAGAA-GT---CCC-CGG-CCNACTGC--AATA----ATAGAC--GT-GTG-AAAA-GC-ATAATATAT-TGTATTTANAAACAC-TTTTGGTAGTCTTTGTAATNA-TG-TCCTCTAA-AG---TTAA--T--TTT---TATTACATTCCTAACGATGAA-TTACCTGCATAT-C-----TTGAAT--AAAGAATTCGCTGACT---TTAGTAAATA--CGTTTT--A--T-ATTTG-------GAGT-ATAATTTCACCGGTATTTAAC---------TACCTCCTNGATNCGTGTTT-GAGCTAAA
gi|1 : AACAATAAAGA-GAATAATTCATGA-AGTAGATTTTCACATTCATTAGAA-GT---CCCGCCG-CTCACTGTTTAATA----ACAGAC--GT-GTGCAAAACGT-GTAAGCTA---AGATTTGTTAACAC-TTTCTGTAACCTTT-----------TCCTATAA-------TAA--T--TCC----GTTACATTCCAAATGATGAA-TAACCAGCTTAC-C-----TTGAAT--AAAGAATTCGCTGCTT---TTAATAGATG--TGTTTT--A--T-------------GAGTCATAGTTTCATCACCAATT-CC---------CACCTCCTTGATGCGCGCAT-GAG-TAAA
gi|10 : TTACACGGGTATCCAAC---------TACCTCCTGGACCCGTATTT-GAacaacacgacgtcatcagcgt
gi|11 : tattgacttactgcAACAGTAAAAA-GAATGAATCAAGA-AGTAGATTTTCATATTTATTAGAA-GTG--CCC-C---CATACTGCTTCATAATCTATAGAC--GT-GTG-AAAC-AC-ATATTAtaatactgacgtcgtcaacgtcaatttattgtatacaatacaatatga
gi|12 : aaT---TACTACATTCTTAATGATGAG-TTACCAAGATAT-C-----TTCAAG--AAAGAGTTTGTTGACT---TCAGTAAATA--a
gi|13 : tagtataataacaaaacTAATGACAAA-TTACCTGTATAT-C-----TCGAAT--AAA-AATT-ACTGACT---TCCACAAA-A--TGTTTTTAAC-T-ACTGA-------GAGT-ATAATTtttctaactatgt
gi|14 : TAA--T--ATT---TATTACATTCCTAGAGATAAA-CTACCTGGATAT-C-----TTGAAT--AAAGAATTTGCTGATT---T
gi|15 : agcttaAACAGTAAAAA-GAGTAAAACAAGATGGT-GGTTTTCATATTTATTAGAA-GT----CC-CGG-CTTACTGC--
gi|16 : atAATTTTGCCAGTTTTGAAT---------TACCTCCTTGATCTGTGCTT-GGGCAAAAt
gi|17 : ACAGTAAAAAAGAGTATATTAAGA-AGTATATTTTCATATTCATTAGAATAT---CCC-Ctggtatcaccaacat
gi|18 : AACAGAAAAAA-TAGTAAATCAAGA-AGTAGGTTTTCATATTGATTAGAA-GT---CC
gi|19 : atAATGGTAAAAA-GAGTAAATCAATA-TGTAGG-TTTCATATTTATTAGAA-GT---CC
gi|2 : tTA-AAGA-GCTATACTATGTATGTAAT-AGCAACACGTTTTG--AGTTTTTGTTATAA-TGATTATTTGA-AGGTGTTAAATTGGTTT---TATTACATTCCCAACGATGAA-TCACCTGGATAT-C-----TTGAAT--AAAGAATTCACTGAATTTATTACTAAATA--TGTTTG--AC-T-ATTGG-------GAGT-TTACTTTCTCCGGTAATTAACTTCATTTTGTATCTTCTAAATTT-TGTTTGGAGC
gi|20 : tatAAAAA-GAGCAAACCAAGA-AATAGGTTTTCATATTTATTAGAA-GT---Catatataggtgatatatcagtatcagtaatgttttaatttataaaatacaatata
gi|3 : aAAAAG-AAGTTAATCAAAA-A-TAGGTTTTCGTATTGAATAGAA-GTATGCCC-C---TTTACTGCTTCATG----ATAGAC--GT-GTG-GAAA----ATAAT-TAA-AG--TTTATAAACAC-GTTTTGAAACCTT--TAATTATTC-TCCACTAAGAA---TTAA--A--ATT---TG-TACATTCCTAATG-------------------T-----TTGAAT--ATAGA------TGA---------TAAATG--TGTTTT--A--TGATTTA-------GA-T-ATTATTTCACCG
gi|4 : ggAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT---TTT-TAAACCAAC-AC--AATA----ATAGTCTAATAGTG-AAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTATTCTTTGTAATC--TG-TCCTCCAA-AG---TTAA--T--TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATccaat
gi|5 : atAACAATAAA---GAGTTAATCAGGA-AGTAGATTTGAAAATTAATTAGAA-GT---TTT-TAAACCAAC-AC--AATA----ATAGTCTAATAGTG-AAAA-GC-ATAATATAT-TGTATTTAAAAACAC-TTTTGGTAGTCTTTGTAATC--TG-TCCTCCAA-AG---TTAA--T--TTTAAATATTACATTCCATACGATGAATTTACCTTCATAT-C-----TTGAAT--AAAGAATat
gi|6 : tATTACATTCTTAACGGTGTA-TTACAAACACAT-C-----TTCAAT--AAATAATTCACTGACT---TTAGTAAAT---CATTAA--C--T-ACTTG-------GAGT-TTAATTTCACCGGTATTTAAC---------TACCTCCTGGATGTGTGTTT-GAGCTAAAat
gi|7 : ACATTTCTTACGATGAA-TTACTTACATATACATGTATTTAATGAAAAAAATAC-CGAATT---TTAGAAAAAAAACATTTT--AACT-ACTTG-------GAGT-ATAATTTCACTTGTATTTAAggtcctcaccaacgtcagtatgtacattgtatatacaatgta
gi|8 : CATTCATAACGATTAG-TTAACAAGATAT-T-----TTCATT--AAAGAATTCGCTATCT---TAAGTAAATA--CATTTT-------------------------TA-TTTCACCGATATTTAAC---------CACCTCCTTGAT
gi|9 : TACATTCTCAATGATGAA-TTATCTATATAT-C-----TTAAA---AAAGAAATTACTGAC---------ACATA--T-TTTT--A--T-GTTTGTATTTAAAAGT-ATAATTTTACCAGTATTTAAC---------Tatat