lowQualScore : 11111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111 11111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 22 1 1 111 333333333333333333333 66666666666666666666666666666666666666666666666666666666666666666 111 2 22 555555555555555555555555555555555555555555555555555555555555555555555555 111111 11 1111 1 222222222 1111 11111 44444444444444 2222 111 2 1 333333333 11 1 111111111111 11 333333 77777777777777777 1 4444444444 11111 11111111 444444 2222222 1 111 55555555555555 11 66666666666666666666666666666666666666666666666666666666666 1 11 44444444 11111111 33333 33333 222222 55555 11 22 8888888888888 5555555555555555555555555555555555555555555555555555 1 1111111 11 444444444444444 111 88888888888888888888888888888888888888888888888888888888888888888888888 22222 2 1111 6666666666666666666666666666666666666666 111 11 6666666666666666666 11111111111 5555555555555555 11111111111 1 444444444444444444 2222222222 2222
lowQualScore : 44 777 00 5 4 5 0 3 777 77 5 111111111111111111111 00000000000000000000000000000000000000000000000000000000000000000 7 222 0 22 0 2 2 000000000000000000000000000000000000000000000000000000000000000000000000 555555 99 1 2222 4 8 66 4 5 0 0 0 111111111 99 1 33 9999 1 3 1 66666 66666666666666 8888 111 4 6 2 1 6 3 5 5 5 888 7 000000000 88 00 777 4 4 2 888888888888 66 777777 555 5 00000000000000000 88888 5 5 5555555555 44444 5 5 66666666 000000 7777777 0 5 777 1 5 11111111111111 33 55555555555555555555555555555555555555555555555555555555555 0 33 6 3 88888888 9 99999999 4 1 888 6 77777 8 4 6 1 4 7 11111 88 5 000000 11111 5 2 888 1 1 6 00 00 888 5 00 1 0 0 2 7777777777777 1 5 4 2222222222222222222222222222222222222222222222222222 6 33 8 5 8888888 77 33 5 000000000000000 111 8 11111111111111111111111111111111111111111111111111111111111111111111111 0 6 66666 0 6 555 11 2222 77 0000000000000000000000000000000000000000 6 666 00 4 8 2222222222222222222 2 4 88888888888 3333333333333333 77 4 1 8 66666666666 0 4 4 000000000000000000 4444444444 0 1111 2 1 6
lowQualScore : .. ... .. . . . . . ... .. . ..................... ................................................................. . ... . .. . . . ........................................................................ ...... .. . .... . . .. . . . . . ......... .. . .. .... . . . ..... .............. .... ... . . . . . . . . . ... . ......... .. .. ... . . . ............ .. ...... ... . ................. ..... . . .......... ..... . . ........ ...... ....... . . ... . . .............. .. ........................................................... . .. . . ........ . ........ . . ... . ..... . . . . . . ..... .. . ...... ..... . . ... . . . .. .. ... . .. . . . . ............. . . . .................................................... . .. . . ....... .. .. . ............... ... . ....................................................................... . . ..... . . ... .. .... .. ........................................ . ... .. . . ................... . . ........... ................ .. . . . ........... . . . .................. .......... . .... . . .
lowQualScore : 33 888 11 0 0 0 4 9 999 99 0 777777777777777777777 00000000000000000000000000000000000000000000000000000000000000000 8 222 0 88 8 8 5 222222222222222222222222222222222222222222222222222222222222222222222222 000000 44 7 1111 3 9 11 4 0 1 2 9 777777777 00 7 77 9999 0 5 0 77777 11111111111111 8888 777 8 7 2 0 0 7 0 7 0 888 0 222222222 99 66 888 4 3 2 111111111111 11 333333 222 0 00000000000000000 00000 0 7 6666666666 77777 7 7 88888888 222222 0000000 8 0 555 2 0 22222222222222 88 22222222222222222222222222222222222222222222222222222222222 0 88 5 5 22222222 0 44444444 8 7 333 0 44444 6 3 0 7 3 3 22222 55 7 999999 88888 0 2 888 4 0 0 11 22 222 1 44 4 2 1 7 2222222222222 9 5 0 4444444444444444444444444444444444444444444444444444 6 11 6 0 6666666 99 66 7 666666666666666 555 0 00000000000000000000000000000000000000000000000000000000000000000000000 7 7 77777 3 8 444 99 1111 99 9999999999999999999999999999999999999999 0 444 99 4 9 2222222222222222222 7 0 00000000000 6666666666666666 00 0 6 7 66666666666 7 0 0 555555555555555555 3333333333 9 6666 7 1 0
consensus : GGN-TGTTCCGTAAATAATGCGAC---TGCTGTATTATTTC-TTGGAAATCGTGC--NA--TATATA----AATGAAACAACTTN---GTATCGCTAG-----A------------G---TGA-------------T------CACTGGTGC-TGT---AG-TAAAA-T-CTGCCTCAA-ATATTCACTGACCTTGGTGCAATGTACATTGCTTNA------------TA-----------GC---GTAT--------------------GCAA------AN--TG--ACT--G---GC-AAACGAGCTGAAAA----TGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTC-----AGATG--GCGTATATTACTATTTGT-AGGTGGGTGGCCAAA-TTTCNATCCGGGCAACAGCAGTTGA-AAGA---TGCTGCTCGCCCTGGTC-GTCCTGTAACGTCA--AC---A-ACCAAAGAAAACA-T--AAAAAA--ATCCGCGAAATCCT--GAAAAC-T-GATGCA-AGT-----------AAGAGANTT--AGCTCGGATGAC-AAACTT-TCGTTAGCACGAGTT-CATCT-AAT---T----TTAAAAAAG-CA--TTTAAANGTTAAGAAAATAAATGCACGAT---GGATACC----GCA-------TTTG--TTGACGAG-ACAAAA-AGNANTC-TTTTC-AAAACATGGNTCCGCTATNGCGA----G-T----AAAA-AGA--AAAGCNT------CNAACAGAATNTG----GGTCACGGAAAATGCGAGACG--CCCATGTATTGC-CAAACGATTGCGATCTGTTAAGAAGGTTATGTATGCAATATTTTTCACT-AGCAACG--GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTTTATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGGT----CTGAAGTATGTTCGTCTTTTGCATGAC-A--A-CGCGCCAG--CCCA--A-AANN---CCCGT-ATTGTG-AC---NNACNTTTTGCAGTCAGAGAAGGTCACCGTTC-------TCCC--TC--AC-CC-C--TCNA-------TACT--NGCCAG-AC----------G--TG----------------T----------------T------CTC-------------TTCCCAAAA-C---TAAAAAAAACACTTGTCTGGGAAGAGA----TAT--AACTCGAGA-A-TGC--CCTGGG--ATCTGC-TAT-T-ACCAGTGTCTTAAGGGTATACCTGTTCAAGAA-TAC-G-A-----------AA----N-TGTTTT-CA-----A-----AATTG-AT--C---GC-G--GTTA-AAAAC-GTGTGTTTT-------A-GCTAAANGGGAGTAT-TTTG-AAGGAAATCGNAAAA-------NAAATT-G----AT-AAAAATGATT-A--TAGTACTCTAGTAACAATA
Reference ( gi|1 ) : GGT-TGTTCCGTAAATAATGCGAC---TGCTGTATTCTTTC-TTGCAAATCATGC--CA--TATATA----AATAAAAAAACATT---GTATCGCTAG-----A------------G---TAA-------------T------CGCTGGT------------TAAGA-T-CTGACTCAA-TCATTCGCTGACCTTGGTGCAATGTACATTGCTTGA------------TA-----------AC---GTAT--------------------GCAA------AT--TG--ACT--G---GC-CAACGAGCTGAAAA----TGTGCTTGAAATTATGGCC--TA-TATTCGATGTAGGTCATTACTTGAGTTGAAATCGAAAGGCATTTACTGAGAGGTGTGTAATATTTACGGGGAAGGTC-----AGATA--GTATATATAATTATTTGT-TGTTGGGTAGTCAGA-TTTCAATCTGGACAACAGCAGCTGA-AA-A---TGCAGCTCGCCCTGG-C-GTACTCTAACGCCA--AC---A-ATCACAGAAAACA-T--AAAACA--ATCCTCGAAATTAC--GAAAGC-T-GATGC----T-----------GAGAGATTT--AGCTCCGATGAC-AACATTGTTGTAAGCATGAAAT-CATCT-AAT---T----TTAAAAAAG-GT--TTTAAAAGTTTTGAAAATAAATGAACGAT---GGATATC----GCA-------TTTG--TTGACGAGGACAAAA-AGAAGTCATTTTTGAAAACTTGGGTTGGTTATTATGA----GAT----AAAA-AGA--AAAGCAT------ACAACATAAATTG----GGCCACGGAAAATGCGAGACG--CCCATATATAGT-AAAATGACTGCGATCTGCTAAGAAGGTTCTGTGTGCACTACCTTTTGCT-AGCCAAG--GTCCTGCAGCCGTACAGACA-GCGGTGCCA---AAGGGCAAAACTGCCACAGGACGG-TTTTATACAAAC--GTAACTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAATACATGTAAATCTGAAGTATGTTTGTCTTTTACATGAC-A--T-TGCAACAG--CTCA--A-AATT---CTCGT-GTTGTG-AC---ATCCATTATGCAGTCAAAGAAAGTCGCCGTTC-------TCCC--TC--AC-CC-C--TCTA-------TACT--AGCCAG-AC----------G--TG----------------T----------------T------CTC-------------TTTCCAAGA-C---TGAAAGAAACATTTGTCTGGGAAGAGA----TAT--AAGTCGACA-A-TAT--CCTAGG--ATCTGCACAT-T-ACCTGTGTCTCAAGGGTATATCTGTTCAAGAG-TAC-G-A-----------CA----T-TATTTT-CA-----A-----AATTG-----C---GC-G--ATTG-AAAAC-GTGTGCTTT-------A-GATAAACGGGAGTAT-TTTG-AAGGACATCGCATAA-------GAAATT-A----ATCAAAAATGATT-T--TAATACTCTAATAACAATATAA
gi|5 : GGA-TGTTCTGTAAATAATGCGAT---CGCCATATTATTTC-GTGGTAACCGTGCAACA--TA-ATATTATAATGATACAACTTG---GTACCGCTAG-----A------------G---TGACTATTGGTACGTGT------CACAGGT------------AAAAA-T-CTGCCTCAA-ACATTCACTGACCTTGGTGCAAAGTTCATTGCTTGA------------TA-----------GC---GTATTCCTT---------------ACAATGTATGATAATG--ACT--T---GC-AATCGAGCTGCAAA----TGTGTTTGAAATTAGGGCC--TA-TATTCGAGGTAGGT-------TGA--TG---TCGAAAGCCATTTACCAAGA--TGTGAGACATTTACGGGGAGGGTC-----AGATG--TCATATATTACTATTTGT-AGGCGGGCGGCCAAA-TTGTAATCCGAGCAACAGCAGTTGA-AAGA---TGCTGCTCGGCCTGGTC-GTCTTGTAACATCACTACCAAA-GCCAAAGAAAACG-TAGAAAAAA--ATCCATGACA--ACCTGAAAAC-T-GAAGCAAAAC-----------AAGAGATTT--AGCTCGGATAAC-AAACTTATCGTTAACGCGAATT-CATCTAAATATAT----TTAAAAA
gi|33 : GGG-TGCTCCATAAATAAGGCGACGACTGCTGTATTATTTC-TTGGAAATCATtga
gi|30 : GGTATGTTCGGTGAATAATGCGAT---TG--ATATTGTTAC-TGGAAAACTATACT-CATTTTTATC----AATAa
gi|18 : cgcaaaaga-TATTTTATAAATAATGCCAC---TGGTGTATTATTTC-TTTGAAATC---T--CA--TA-----------------ACTTT---GTATCGCTAG-----AAAGATCACTGGTG---CAAG------------T------CGCTGGT------------TAAAA-T-CTG--TTAA-ATATTCACTGACCTTGGTGCAATGTACATAGCTTTG------------TAGTTTATTCATTACACTGTAT--------------------GGTA------AT--T---ACT--G---GC-AAACAAGCTGAAAA----TGTGCTTt
gi|21 : aa-TGTTACGTAAGTAATGCGAT---TG--GTATTGTTGC-T
gi|19 : tctagaatgcgaataacaattctaaattgaattgcgcacttgcaaacatgtgtttaactaaaagggagacttttgaaggaaatccaataggaaattgatagaaatggttattgtactct-TGTTTCGTAAATAATGCGAT---TG--GTATTATTggaac
gi|13 : ctgttcacgaatacgaaatatgttttgcaaaattgcattgcgctgttaaaaaagtctgttttagttaaatgggatgattttgaaaaaatatcgaaaaaaatcgctaaaattgatataatgattattgtagtagtctggtGTTCCATAAATAATACGAT---TG--GTATTGTTAC-Tcc
gi|16 : actgttctctctcaccccatccatactagccagatttggcccattgtgtttttttactcttcccaagacaaaaagtacttgtccggaagggatataactcgagagatgccgtgtgatctgctatataccagtgtcttaaggaaattactgttcaagaatacgaaagatgttttcaaaattggattgcgtggtttaaaacgtttgttttagccaatctgaaggaaattgaaaaataaattgataaaaaattattgtaatattctTTCCGTTAATAATGCGAC---TTTTGTATTATTTC-TCGGAAAT--------A--TATGTA------TGAAA---CATTTTCGTGGCGTTGGTGCGTA------------GGCCTAC-------------TGAAACACACTGGT------------ACATA-T-CTGCCTCAA-ATATTCACTGCCCTTGGTGTAATGTACATTGTTTGA------------TA-----------GT---GTATTCATACCACTGTAATACTATGCAA------AA--TG--ACT--G---GC-AAACGAGC-GAAAA----T-TGCTTGAAACTACGGCC--TA-TGGTCGAGGTAGGTCA-------AGGTGAAGTCGAAATACATTTACCGATAGTAGTGTGACATCTgcttct
gi|7 : tggaCCATATATAATACGAC---TGCTGTATTATTTC-TTGGAATTCATGC--AA--TATATA----ATTGAAACAACCTT---ATATCCCTAA-----A------------T---TGA-------------T------CACTGGTGCATGTCGCAGGTAAAAAT-CAGCCTTAA-ATATTCATTGATCTTGGTGCAATGCACATTGCTTTAAAGTGTATTCATTAC----------ACT--GTAT--------------------GCAA------AA--TG--ACT--T---GC-AAACAAACTGAAAA----TCTGCTTGAAATTATGCCCGATATTATTCAAGGTAGGTCATTACTTGAGTTGAAGTTGA-----ATTT---------TTTTT--TTTCTGC----AAGGT------AAATA--GCA--------CATTTGT-AGATGGGTGAACTGA-TTTTGATTTGGGTAACAATAGTTGA-AAGA---TGCTGCTCGCACTG----GTCCTGTAACATCA--AC---A-ACCAAAGAAAACATT--GAAAAA--ATCTGTGAAATTCT--GAAAAC-T-GATGC----T-----------
gi|34 : ATTATTTC-TTGCAA-TCATGC--AA--TGTATA----AATAAAACAACTTG---GTATtgatatgaagtagaagacttggatgttgttaccaccagtttagttgcatctaaaagttaagaagacaaatgca
gi|2 : TTTCGTTG-AAATCGTGC--AA--TATATA----GATCAGACAATTTG---GTATCACTAG-----C------------T---TGA-------------T------CACTGGTGCGTGTTAGAGCTAAAA-AACTGCCTCAAACCAT-CGCTGATCTTGGTGCAATATACTTTGCTTGAAATTGTATTCA-TA-----------GCACTGTAT--------------------GCAA------AA--CG--ACT--G---GC-AAACGAGCTAAGAA----TGTGCTTGAAACTAGAGCC--TA-TATTCGAGGAAGGTCATTACTTGGATTGAAGTTAAAAGATTTTTACCGAAAGGTGTGTGGCATTTATGGGAAGGGTC-----AGTTG--TCGTAAAGTACTATTTGTATG-TGGATTACCAAA-TATCTATCCGGGCAACA------GA-AA-AGCGTGTTGCTCACCCTGGTC-GCCCTGTAACCAGA--GC---ATATC---GAATAAA-T--AAAA-ATTATCCTGAAAAAT-----AGTGC-TCGATATACAGT-----------AAGAGATTT--AACTCGGATGAC-AAACTTGTCGTTAGCAC-AAATACATCT-AGT---T----TTGAACAAGCAT--TTCAAAA---TTAAGAAAAAAAGCACGAT---GGATACC----ACA-------TTTG--TTGACAA--ACAAAATAAAA----------AAAA---GGGTT-GCTATGGCGAAAACGATTTGGAAAATAAATCAAAACCTCTTTTGAGAATATAGGTAGGAGTGATCTCGGAAAAT-CGATACG--CCCATGTTTTTC-CAAATGTGTGTAATATGTTAAGAAGTTTATACTTGCAATA-TTTTCCCT-AGTAACA--GTCCT---GCTGTTCAGACA-A-AGTGCCA---AATGGCAGAACTGTCACAGGACGG--TTTATAT--AC--GTAACTTTGAAACAATTGAAGAAGTACTACAAAAAGCGTTGCCCTAT-AT-CAGG----GCTGAAGTATGTTCGTCTTTTCCATAACTA--CGTGC--CAG--CCCA--C-AAAG---CCCGT-ATTGTG-AC---a
gi|28 : taGCAACGTACATTGTCTTA------------TA-----------AC---GT----------------------GC---------T--TGTTACTCTGTATACATAATGA-CTGGAAAACATTGTGCTGTAAATTAGGACC--TA-TATtgactttttgtagactaaaaacacttgtctaggaaaatgtacaacccgagaaatgccctgagatctgcgtttacccttgttttgagggtataccttttcaagaatacgaaaaatgttttcataattagattgcactgttttaaaatgtgtgttttagctatattaagtattttgaaggaaataacaaagaaattgaatataattatagtattctagtagcaataccaattgcattattaacataacacccc
gi|11 : --------------------GCAA------AA--TA--TCT--G---GC-ATACAAGCAGAAAA----TTTACTTGAAAATAAAGCC--TT-TATTCCAGGTAGGTCATTACTTattacaggtagactgttaattg
gi|15 : aCTTGAAATTTGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGATATTG-AAGTCATATACCAAGGAGTGTG--ACATTTATGGGGAGGGTC-----AAATGTCGTATA-GTAA-TATTTGT-AGGTGGGTGG-CAAATTTTTAATCCAGGCAACAGTACTTGA-AACA---TACTGCTTGCCCTGGTC-ATCCTGTAAC-CTGT-AA---G-ACCAAAGAAAA------AA---A--ATCTCTGAAATC-T--GAAAA--T-GATACATAGT-----------AAGAGTGTTAAAGCTTGGATAAC-AA-ACT-------------AGT-CATCA-AAT---T----TTGAAAAAG-CA--TTTAAAcaaattttgttaagtactatttgtaggtgaatggccaaatttcaatcctggcaaaagcagctgaaatatgcttctcaccctggtcatcctgcaatgtcaacaaccaaagtgaacataaaaaaatctgtgaagtcctgaaaactaatgctagatacttgacaaacatttcgttagcatgagtttatctaatttgaaaaaacttctaaatgttaagaaaatatattcctgatgggcaacacattaaaattttgttgacagaagggtattccttttccaaaa
gi|12 : AATTAGTGCG--TA-TATTCGAGGTAGGTCATTACTAGCGTTGAAGTTAATAG--ATTTACCTAAAGGTGTGTGCCATTTACAGGGAGGATC-----AAATG--GCGTGTAGTGTTATTTGT-AGGTGTGTAGTCATA-TTTCTATTTGTGCAACAACAGTTGAGAG-A---TTCTACTGGCGCTGG-TGGTCCTGTAACGTTA--AC---A-ACCACAGAGAACA-T---CCGCATTATCCT-GAAA--AC--CAATGCTT-GATACATCAT-----------ACGACACTT--AGCTCAGGTGAC-AAC---CTTGTAAGCAAGAGTT-CATCT-AAct
gi|4 : acTGGC---TA-TATTCGAGGTAGGTTATTACATGGGTTGAAA-------ACATTAACCGAGAGGTGTGTGGCGTTTACGGGGAGG--CATAAAAGATG--GTAT-TGT-ACTACTTGaggttaagataataaatgc
gi|11 : tagACTATTTGT-AGGTGAATGGCCAAA-TTTCAATCCTGGCAAAAGCAGCTGA-AATA---TGCTTCTCACCCTGGTC-ATCCTGCAATGTCA--AC---A-ACCAAAGTGAACA-T--AAAAAA--ATCTGTGAAGTCCT--GAAAAC-T-AATGC----T--------------AGAT-----ACT----TGACAAACATT-TCGTTAGCATGAGTT-TATCT-AAT---T----TGAAAAAA--CT--TCTAAATGTTAAGAAAATATATTCCTGAT---GGGCAAC----ACATTAAAATTTTG--TTGAC-AG----AAG-GGTATTCCTTTTCCAAAAaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|4 : agcaaaatatctggcatacaagcagaaaatttacttgaaaataaagcctttattccaggtaggtcattacttcaaattttgttaagtAGTTGA-AAGA---TGCTGCTCGACCAGGTC-GTCCGATAACGTCA--AC---A-ACCAAAGAAAACA-TC-AAAACA--ATCCGTGAAAGCCT--GAAAAC-T-GATGC----TCGAAACACAGTAAGAGACTT--AGCTCGGATGAC-AAACTTGTCGTTAACACGTGTT-CGTCT-AAT---T----TAAAAAAAA-AACATCTAAAAGTT------ATAAATGCATGAT---GAATACC----GCA-------TTTG--TTGACACGAACCAAA-AGCAGTC
gi|29 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaaggg-A---TGCTGCTCACACTGT-C-GTTTTGTATCATCA--AC---A-ACCAAAGAAAACA-G--AAAAAA--A-CTGCCAAATCTT--GAAAAC-cgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|6 : gTAACGTCA--AC---A-ACCAAAGAACACA-TT-GAAATA--ATCCGCGAAATCTT--AAAATT-T-GATG-----T-----------AAGAGAGGC--AGCTCGGATG----------CT---AGCACGAATT-CATAT-AAT---TCAAGTTAGAATAG-CA--TTTAAATGTTAAGAAAATAAATGCACGATTCACGAAGTCAAGGG----------TTGCTTTGGCGAA---AAAA-AGAAAATGTTTTCGAAA
gi|6 : atgAAGACATGGCTCCATTATTATGA----G-T----AAAA-AAA--AAA-CTT------CTACCAGAATTTG----GGACGCAGAAAATGCGAAACA--CCCATGTATTGC-CAAACGATTGTGACCAGTTTAGAAAGTTATGTATGCAATGTTTTTCACT-AGCAACG--GTCAT---GTCGTACAGACA-GCGATGCCA---AATGGCAGAACTATCACAGAGCGA-TTTTATA-AAAC--ATAATTCTAAAAGAATTAAAGAAGTACTACAAACAGCGTCGCCCT---ATACAGG----------GC-TGTTCGTCTTTTGCATAAC-A--tacagccaaactattgcgaaagtagtacgagttataagacatggctccattattatgagtaaaaaaaaaacttctaccagaatttgggacgcagaaaatgcgaaacacccatgtattgccaaacgattgtgaccagtttagaaagttatgtatgcaatgtttttcactagcaacggtcatgtcgtacagacagcgatgccaaatggcagaactatcacagagcgattttataaaacataattctaaaagaattaaagaagtactacaaacagcgtcgccctatacagggctgttcgtcttttgcataacaacacaa
gi|4 : atgtaacgtcaacaaccaaagaacacattgaaataatccgcgaaatcttaaaatttgatgtaagagaggcagctcggatgctagcacgaattcatataattcaagttagaatagcatttaaatgttaagaaaataaatgcacgattcacgaagtcaagggttgctttggcgaaaaaaagaaaatgttttcgaaatacagccaaactattgcgaaagtagtacgagttatTGA----GCC----AAAA-TGA--AAAGCAT------CTAACAGAATGTG----GGTCACGGAAAATGCGAGACG--CGCATGTATTCC-CAAACTATTGCGATATGTTAAAAAAGTTCTGTATGCATTG-TTTTTACT-TGCAACG--GTCCT---GCTATACAGACAGGCGGTGCCA---AATTGGAGAACTGTCATAGGACGT-TTTTAacacaa
gi|20 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggAAA-AGA--ATAGCAT------CGAACAGAATGTG----GGTCACGGAAAATGCGAGACA--CCCATGTATTGC-CAAATGATTGCGATCTGTTAAGAA-GTTATGTATAC
gi|3 : aaaatatatgggaaaacattgtttcaatttttaatactttttgccatagttttaaaatatggattttTG----GGTCAAGGAAAATATTAGAAA--TCCATGGATTGC-CAAACGATTGCAATCTGTAAAGAGGGTTATGTATGCAATAT-TTTTACT-AGCAATA--GTCCTGC---CGTACAGATA-GCGGTGCTA---AAGGACAAAACTGTTACACGACGG-TATTTTAAAAAA--GTAATTTTGAAACAACTGAAAAAGTACTACAAACAGCGTCGCCCTATAA--CAGGT----CTGGAGTATGTTCGTCTTTTGCATGAC-A--A-CACACCAT--CCCATTA-AG-----CCTGT-ATTGTG-AT---TGACATTTTGCAGTCAAAGAACTTCATCGTTCCACTCACTCCCGCTCCTAC-CCAC--TCTACTCGCAATACTTGGGCCCGTAT----------GCCTA----------------T----------------T------TTTAT-----------TTTCCAAAAAC---TAAAA-ATACATATGTCAGGGACGAAACATATAT--AACTCGAGACA-TGC--CCTGGA--ATCTGCTCTG-T-ATCAGCGTCTTAAGAGTTTACTTGTTTAAGAA-TAC-G-A-----------CA----AACGTTTT-CA-----A-----AACTGAATTAC---GT-G--GTTA-AAAGC-GTGTGGTTT-------A-GATAAAAGGGAGTAT-TTTG-GAGGAAATTGCAAGA-------TAAATT-T----AT-AAAAATG----T--TAAT
gi|14 : ccTA----GGCCACGGAAAATGTGAGACG--CGCATGTATTGC-CAAACGATAACGATCTGTGTAGCAGGTTCTGTATGCAATAGTTTTCATT-AGCAACG--GTCCT---GCTGTACAGACA-GTGGTGCCA---AAGTGCAGAACTGTCACAGGACGGTTTTTATAAAAAC--GTAATTT--AAATAATTGAAGAAGTACTACAAACAGCGTCGTCCTATA--ACAGG----TCTGAAGTATGTTTGTCTTTTGCATGAC-A--A-TGCGCCAG--CCCA--C-AATA---CCCGT-ATTGTG-ACTTGAT--ATTTTACAGTCAGAGAAGGTCACCGTcaagggagataatagtagtgtgattcctgaaagtcagtgat
gi|8 : CATGAAAAATG--AGACCATCCCATGTATTGCCAAAATGAATGTGAT-TGTTAAGAAGGTTCTGTATGCATTTTCTTTCACTTAGGTAACATGTCCTGT---CATACAGATG-GCAATCACA---AAGGGCTAAACAATCACCGGACA--TTTTATTAAAAT--GTCATATTGAAATAATTGATGAAGCACTACAAACAGCATAGTCTTGT------TGGAGTTCTGAATTATATTCATTTGTTGCATGAC-A--A-TGCGCCAG--C-CA--ACAGTC---CT--T-ATTGTG-CCTG-ACCTCTTA--CAGTTAGAGAAGGTCACCATTC-------TCCT--CC--ACACC-C--CCAA-------TACT--CACCAG-AC----------A--TG----------------TCCCCCTGTAATAATTAT------CTC-------------TTCCTAAAA-CAAAAAAAAGAAACACTTTTCTGTGAAGAAA----TAT--AACTTG-CA-A-AATGACATAGGA-ATCTGATAAT-T-ACA-GTGT-TTAAGGGTACATATGTTGAAAAA-TA
gi|25 : -AGCAATG--GTCCTGTGG---TACAGACA-GTGGTGCCA---AAGGGCAGAATTGT-ACAGGACAG-TTTTATAAAAAAAAGAAATTTTAAAACAATTGAAGAAGTACTGCATACAGCATCGCCCTATAACA
gi|24 : G--GTCCT---GCCGTACAGATA-GTGGTGCCATTTGAAGGCAGAACTGTCGCAGAAAAG-TTTTATAAAAAC--GTAATTTTGAAACCACTAAACAAGTA------------------TATA--ACGTGTAAA----AAGTAGGTTCGTCCTTTGCAg
gi|9 : ctttaacagcagcGCAAAATAGTCACAGAACG--TTTTATA-----------------AATAACTGAA------------ACAGCGTCGCC-TGTAA--CAGGT----CTGAAGTGTGATCGTCATTTGCATGAC-AACA-TGC--CAG--C-CA--A-AAAGAAACCCATAGT--TC-AC---TTATATTTTGCAGTCGGAGAAGGTCACTGTTC-------ACGC--TCA-AC-GC-C-----A-------TACT--CACGAG-AC----------A--TG----------------C----------------C------CTCTGTGACTATTATTTTTCCCAAA-T---CTAAAAAAACAATTGCCT--TAAG-GA----TATGCAAACAGAAA-A-TGT--CTT
gi|10 : gcCAGTGTCACCCTTTAA--CAGGT----CTGAAATATGTCTGTCTTTTGCATGAC-A--A-CGTGCCAG--CACAC-A-AAGC---CT-GT-ATTGTGGAT---AACTTTT-TGCAATC---------------TC-------TCCC--AC--AC-ACACAACCCA-------AACT--AGCTAG-AT----------T--TGGCCCTCTTTGACTATTT----------------T------CTC-------------TTCCAAAAA-C---TAAAA-AAGC--TTGTCTGGAAAGATA----TAT--AACT----------T--CC---G--A-------AA-T-GCC-----CTTAAGGGTAT---TGCTCAAGAA-TAT-G-A-----------AAA---T-TGTTTT-CA-----A-----AATTG------------G--ACTGCAAGGC-ATGTGTTTTTTCATCTATAACAAACAGGAGTAT-TTTG-AAAGAAATCAGAAAA-------ACAATT-T----ATCATAAATGGTA-A--AAGTATTCTAGTACCAATAcaatattggattgtgcggttaaaaaaagtatgttatagctaaaggggaatttatttgaggaattcgccaaacaattgatcaaaataattacagtactcgagtaacaatacgaattgcattatttagggaacatccc
gi|27 : GAAGTATGTTTGTCTTTTGCATGAC-A--A-CACATCAT--CCCAC-A-AAGT---C-CAT-ATTGTG-AC---CGACTTTTTGCAGTCAATGAAGATCACTTTTC-------TCCG--TC--AA-CC-C--TC-A-------TACT--cccatcccattacatatggaacac
gi|35 : AAGTATGTTCGT--TTTACATGAC-A--A-CGCACCAG--CCCA--C-AA
gi|26 : aTATGTTCGCATTTTGCATGAC-AACT-TGC--CAGTCCACA--A-AA-----CCAAT-ATTGTG-AC---CGACGTTTTGCAGTCAGAGAAGGTCGCCGTTC-------TCGC--TC--TG-CC-C---CAA-------TACT--aga
gi|13 : CTGTTC-------TCTC--TC--AC-CC-CA-TCCA-------TACT--AGCCAG-ATTTGGCCCATTG--TG----------------T----------------TTTTTTACTC-------------TTCCCAAGA-C------AAAAAGTACTTGTCCGG-AAGGGA----TAT--AACTCGAGAGA-TGC--CGTGTG--ATCTGC-TATAT-ACCAGTGTCTTAAGGAAATTACTGTTCAAGAA-TAC-G-A-----------AA----GATGTTTT-CA-----A-----AATTGGATTGC---GT-G--GTTT-AAAAC-GTTTGTTTT-------A-GCCAA-----------TCTG-AAGGAAATTGAAAAA-------TAAATT-G----ATAAAAAATTATT-G--TAATATTCTAGTAACAATAtccaag
gi|2 : aAGA-C---TAAAA---ACACTTGTCTAGGAAAATG----TAC--AACCCGAGA-AATGC--CCTGAG--ATCTGCGT-T-T-ACCCTTGTTTTGAGGGTATACCTTTTCAAGAA-TAC-GAA-----------AA----A-TGTTTT-CATAATTA-----GATTG-----C---ACTG--TTTT-AAAAT-GTGTGTTTT-------A-GCTATAT-TAAGTAT-TTTG-AAGGAAATAACA-AA-------GAAATTGA----AT-----ATAATT-A--TAGTATTCTAGTAGCAATAccaatcgtattatttatggaacgcttct
gi|22 : tatttcgttgaaatcgtgcaatatatagatcagacaatttggtatcactagcttgatcactggtgcgtgttagagctaaaaaactgcctcaaaccatcgctgatcttggtgcaatatactttgcttgaaattgtattcatagcactgtatgcaaaacgactggcaaacgagctaagaatgtgcttgaaactagagcctatattcgaggaaggtcattacttggattgaagttaaaagatttttaccgaaaggtgtgtggcatttatgggaagggtcagttgtcgtaaagtactatttgtatgtggattaccaaatatctatccgggcaacagaaaagcgtgttgctcaccctggtcgccctgtaaccagagcatatcgaataaataaaaattatcctgaaaaatagtgctcgatatacagtaagagatttaactcggatgacaaacttgtcgttagcacaaatacatctagttttgaacaagcatttcaaaattaagaaaaaaagcacgatggataccacatttgttgacaaacaaaataaaaaaaagggttgctatggcgaaaacgatttggaaaataaatcaaaacctcttttgagaatataggtaggagtgatctcggaaaatcgatacgcccatgtttttccaaatgtgtgtaatatgttaagaagtttatacttgcaatattttccctagtaacagtcctgctgttcagacaaagtgccaaatggcagaactgtcacaggacggtttatatacgtaactttgaaacaattgaagaagtactacaaaaagcgttgccctatatcagggctgaagtatgttcgtcttttccataactacgtgccagcccacaaagcccgtattgtgactgactttttgtTGTTTTGAAGGAGA----TAA--AACTAGAGA-A--AT--GCTCGGGAATGTG-ATAT-TTACAAGTGTCTTAAGGATATACCTTTTCAAAAAATAC-GGA-----------TA----T-TGTTTT-CA-----A-----AAT------------------TTG-A---------GC--------------CAAAGGAGAATAT-TCTG-ACGGAACTTGCAAAA-------CAAATT-G----ATccaattgcattattaacataacacccc
gi|17 : CTAAG--ATCGGC-TATGT-ACCAGTGTCTTAAGGGTACTTTTGTTCAAGAA-TAC-G-AAAAATGTTTTTCAATATT-TATTTG-CA-----A-----AATTGGATAGC---GC-G--ATTA-TAAAC-TTGTGTTTC-------A-CATATAAGAGAGTAT-CTAG-AAGGA-A--GTAAAA-------AAAAAT-ATGGTAT--AAAATAAAT-A--TAGTACTCTAGCAATAATA
gi|9 : TGCCTTAAGGATATG------CAA-----ACAG-A-----------AA----A-TGTCTT-CA-----ATATTGGATTG-----T---GC-G--GTTA-AAAAAAGTATGTTAT-------A-GCTAAAGGGGAATTTATTTG-AGGAAT-TCGC-CAA-------ACAATT-G----ATCAAAA-TAATT-A--CAGTACTCGAGTAACAATAatagtcgctttctttgcggaacacc
gi|19 : gcgcaaaatagtcacagaacgttttataaataactgaaacagcgtcgcctgtaacaggtctgaagtgtgatcgtcatttgcatgacaacatgccagccaaaaagaaacccatagttcacttatattttgcagtcggagaaggtcactgttcacgctcaacgccatactcacgagacatgccctctgtgactattatttttcccaaatctaaaaaaacaatCTGTTCACGAA-TAC-G-A-----------AA----TATGTTTTGCA-----A-----AATTG-----CATTGC-GCTGTTA-AAAAA-GTCTGTTTT-------A-GTTAAATGGGATGAT-TTTGAAAAAATATCGAAAAAAATCGCTAAAATT-G----AT--ATAATGATTATTGTAGTAGTCTGGTAATAATAcgaattgcattatttagggaacatccc
gi|21 : TCTAGAA-TGC-G-AATAA-------CA-------ATTCT-AA-----ATTG--AATTG-----C---GC-A--CTTG-CAAAC-ATGTG-TTT-------A-ACTAAAAGGGAGACT-TTTG-AAGGAAATCCAATAG-------GAAATT-G----AT-AGAAATGGTT-A--TTGTACTCTAGCAACAATAccaatcgcattatttacgaaacacc
gi|23 : TTT-CA-----A-----AATTGAATTGT---GC-A--GTTA-TAAAC-ATTTGTTTC-------A-GCTAAAGGGGAGTAC-TATG-AAAGA----GTGT---------------------GTCCACAATTATT-A--TAGTATTCTAGTAACAAccaatcgcattacttacgtaacaggaac
2 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|31 ): GACACCCGCCAATCCATAAACCCCTCATTTTGACTGACATGTTTGTTGTCAGAGAAGGTCAC
Unaligned ( gi|32 ): AAAAATGATTATAGTCTAGTCACAATACCGATCCCATTATTTACGTAACACCCCTCGTA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 11 1111 111 111 99999999999999999999999999 000000000000000000000000000000000000000000000000000000000000000000000000000000000000 2222222222 11 11111 111 22222222222222 6666666666666666 222222222 111111111111 1111 2222222 11 22222222 22222 44444444444444444444444 11 222222222 2222 2222 1111111 33333333333333 11111 444444444444444444444444444444444444444444444444444444444444444444444444444 11 111 11111 111 111111 111111 22222222222222 555555555555555555555 11111111 111
lowQualScore : 1 666 55 3 0 5 2 0000 000 1 0 1 1 111 6 77777777777777777777777777 6 6 2 1 333333333333333333333333333333333333333333333333333333333333333333333333333333333333 1 1111111111 2 3 2 11 4 0 0 1 1 0 0 1 66666 33 7 1 0 0 2 3 55 55 55 777 4 0 555 4 1 0 11111111111111 4 0000000000000000 1 66 1 555555555 4 888888888888 1 0 1 1 0 7777 6666666 11 77777777 6 1 33333 3 1 1 00000000000000000000000 1 8 8 11 3 1 1 1 8 1 222222222 0 66 5 2 0 3 1 7 66 4 9999 4 0 777 0 88 4 4 666 0 1111 9999 1 9999 22 2 666 1 4 6666666 66 88888 00000000000000 5 22222 222222222222222222222222222222222222222222222222222222222222222222222222222 1 77 000 1 1 3 00000 888 66 5 3 111 2 4 0 888888 5 1 0 888 3 8 4 333333 55555555555555 111111111111111111111 22 3 6666 99999 2 3 3 4 1 33333333 3 222 3 555 1
lowQualScore : . ... .. . . . . .... ... . . . . ... . .......................... . . . . .................................................................................... . .......... . . . .. . . . . . . . . ..... .. . . . . . . .. .. .. ... . . ... . . . .............. . ................ . .. . ......... . ............ . . . . . .... ....... .. ........ . . ..... . . . ....................... . . . .. . . . . . . ......... . .. . . . . . . .. . .... . . ... . .. . . ... . .... .... . .... .. . ... . . ....... .. ..... .............. . ..... ........................................................................... . .. ... . . . ..... ... .. . . ... . . . ...... . . . ... . . . ...... .............. ..................... .. . .... ..... . . . . . ........ . ... . ... .
lowQualScore : 0 444 88 2 9 4 8 6666 111 7 3 0 0 777 7 00000000000000000000000000 7 7 5 0 555555555555555555555555555555555555555555555555555555555555555555555555555555555555 0 9999999999 2 4 5 00 0 2 1 1 4 3 7 0 77777 55 0 4 2 2 8 4 66 55 55 000 0 7 999 0 4 5 11111111111111 4 9999999999999999 0 11 9 777777777 4 000000000000 4 5 0 7 1 0000 0000000 00 88888888 8 0 88888 2 4 0 99999999999999999999999 0 0 0 00 2 0 0 0 0 0 999999999 2 99 0 5 2 0 9 6 11 4 4444 4 9 888 1 11 0 8 222 1 9999 4444 6 4444 00 3 000 0 0 2222222 99 66666 88888888888888 9 77777 000000000000000000000000000000000000000000000000000000000000000000000000000 0 33 000 7 4 4 99999 888 99 0 4 000 9 4 2 111111 0 4 2 000 6 0 0 555555 00000000000000 777777777777777777777 99 6 7777 11111 3 6 6 4 0 00000000 3 666 3 888 8
consensus : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGG----TGCGT-GTCG--GG-----T--AAA-A-TCTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A--------AATG----------ACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGNCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTGACGA-G-ACAAAAGGNAGTC-TTTTTCAAAACACGGNTC-GCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACA--AAGCCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-N-TGTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCT-----AAANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
Reference ( family-1457 ) : GGNTGTTCCGTAAATAATGCGAC---TGCTGTATTATTTCTTGGAAATCGTGCNATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGG----TGC-T-GT----AG-----T--AAA-A-TCTGCCTCAAATATTCACTGACCTTGGTGCAATGTACATTGCTTNA-----------TAG--------------C---GT--------------AT--------------------GCA--A--------ANTG----------ACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGGCGTATATTACTATTTGTAGGTGGGTGGCCAAATTTCNATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGANTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATTTAAANGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTGACGA-G-ACAAAAAGNANTC--TTTTCAAAACATGGNTCCGCTATNGCGA---------G-TAAAA-A-GA--AAAGCNTCNAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTATGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCAAA--ANNCCCGTATTGTGAC-NNACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CNATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-N-TGTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCT-----AAANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
gi|1 : GGTTGTTCCGTAAATAATGCGAC---TGCTGTATTCTTTCTTGCAAATCATGCCATATA----TA-AATAAAAAAACATTGTATCGCTAGAGTA---ATC-GCTGG----T------------------T--AAG-A-TCTGACTCAATCATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAA--------------C---GT--------------AT--------------------GCA--A--------ATTG----------ACTGGCCAACGAGCTGAAAATGTGCTTGAAATTATGGCC--TA-TATTCGATGTAGGTCATTACTTGAGTTGAAATCGAAAGGCATTTACTGAGAGGTGTGTAATATTTACGGGGAAGGTCA-----GATAGTATATATAATTATTTGTTGTTGGGTAGTCAGATTTCAATCTGGACAACAGCAGCTGAAA--ATGCAGCTCGCCCTGG-CGTACTCTAAC--GCCA--AC---A-ATCACAGAAAACAT--AAAAC-AATCCTCGAAATTACGAAAG------C-------T-GATGC----------------TGAGAGATTT--AGCTCCGATGACAACAT-TG-TTGTAAGCATGAAATCATCT-AAT---T----T--TAAAAAAGGTTTTAAAAGTTTTGAAAATAAATGAACGAT----GGATATCGCA-------TTTG--TTGACGAGG-ACAAAAAGAAGTCATTTTTGAAAACTTGGGTTGGTTATTATGA---------GATAAAA-A-GA--AAAGCATACAAC-ATAAATTGGG---------CCACGGAAAATGCGAGACG--CCCATATATAGTAAAA-TGACTGCGATCTGCTAAGAAGGTTCTGTGTGCACTACCTTTTGCT--AGCCAAG-GTCCTGCAGCCGTACAGACA-GCGGTGCCA---AAGGGCAAAACTGCCACAGGACGG-TTT-TATACAAAC--GTAACTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAATACATGTAAATCTGAAGTATGTTTGTCTTTTACATGACATTGCAACAGCTCAAA--ATTCTCGTGTTGTGAC-ATCCAT-TATGCAGTCAAAGAAAGTCGCCGTT-------CTCC--CTC--AC-CC----C-T-------CTATACTAG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTTCCAAGACTGAAAG---AAACATTTGTCTGGGAAGAG----ATAT---AAGT--CG-ACA-A-TATCCT-AGGATCTGCAC-AT-T-ACCTGTGTCTCAAGGGTATATCTGTTC-AAGAGTACG-A-C--A-T-TATTTT--------------CAAAATT-G-------CG--C---G--ATTGAAAAC-GTGTGCTTT---AGAT-----AAACGGGAGTAT-TTTGAAGGAC-ATCGCATAA-------GAAAT-TAATCA-A-AAATGATTT---TAATACTCTAATAACAATA
gi|10 : CAGTGTCACCCTTTAA--CAGG----TCTGAAATATGTCTGTCTTTTGCATGACAACGTGCCAGCACACA--AAGCCTGTATTGTGGA-TAACTT-TTTGCAATC---------------T-------CTCC--CAC--AC-ACACAAC-C-------CAA-ACTAG---CTAGAT----------T-----TGGCCCTCTTTGACTATTT----------------T------CTC--------------TTCCAAAAACTAAAAA---A---GCTTGTCTGGAAAGAT----ATAT---AACTTCCG-A-A-A-TGCC----------------------------CTTAAGGGTAT---TGCTC-AAGAATATGAA-A--A-T-TGTTTT--------------CAAAATTGG-A--C--TG--C----------AAGGC-ATGTGTTTTTTCATCTATAACAAACAGGAGTAT-TTTGAAAGAA-ATCAGAAAA-------ACAAT-TTAT-C-ATAAATGGTAA---AAGTATTCTAGTACCAATAtaa
gi|11 : --------------------GCA--A--------AATA----------TCTGGCATACAAGCAGAAAATTTACTTGAAAATAAAGCC--TT-TATTCCAGGTAGGTCATTACTTcccatcccattacatatggaacac
gi|11 : aTACTATTTGTAGGTGAATGGCCAAATTTCAATCCTGGCAAAAGCAGCTGAAAT-ATGCTTCTCACCCTGGTCATCCTGCAAT--GTCA--AC---A-ACCAAAGTGAACAT--AAAAA-AATCTGTGAAGTCCTGAAAA------C-------T-AATGC----------------T-AGATACT-----------TGACAA-ACATT-TCGTTAGCATGAGTTTATCT-AAT---T----T--GAAAAAA-CTTCTAAATGTTAAGAAAATATATTCCTGAT----GGGCAACACATTAAAATTTTG--TTGAC-A-G----AAGGGTATTCCTTTTCCAAAAcaaattttgttaagtactatttgtaggtgaatggccaaatttcaatcctggcaaaagcagctgaaatatgcttctcaccctggtcatcctgcaatgtcaacaaccaaagtgaacataaaaaaatctgtgaagtcctgaaaactaatgctagatacttgacaaacatttcgttagcatgagtttatctaatttgaaaaaacttctaaatgttaagaaaatatattcctgatgggcaacacattaaaattttgttgacagaagggtattccttttccaaaa
gi|12 : agcaaaatatctggcatacaagcagaaaatttacttgaaaataaagcctttattccaggtaggtcattacttcaaattttgttaagAATTAGTGCG--TA-TATTCGAGGTAGGTCATTACTAGCGTTGAAGTTAATAGA--TTTACCTAAAGGTGTGTGCCATTTACAGGGAGGATCA-----AATGGCGTGTAGTGTTATTTGTAGGTGTGTAGTCATATTTCTATTTGTGCAACAACAGTTGAGAG-ATTCTACTGGCGCTGGTGGTCCTGTAAC--GTTA--AC---A-ACCACAGAGAAC-----------ATCCGCATTATCCTGAAAA------CCAATGCTT-GATAC--------AT----CATACGACACTT--AGCTCAGGTGACAA-CC-TT---GTAAGCAAGAGTTCATC----------------------------TAAAGGTTAAGATAATAAATGC
gi|13 : acACTGTT-------CTCT--CTC--AC-CC----CAT-------CCATACTAG---CCAGATTTGGCCCATTG-----TG----------------T----------------TTTTTTACTC--------------TTCCCAAGAC---AAA---AAGTACTTGTCCGG-AAGGG----ATAT---AACT--CG-AGAGA-TGCCGT-GTGATCTGC-T-ATAT-ACCAGTGTCTTAAGGAAATTACTGTTC-AAGAATACG-A-A--AGA-TGTTTT--------------CAAAATTGG-A--TTGCG--T---G--GTTTAAAAC-GTTTGTTTT---AGCC-----AA-----------TCTGAAGGAA-ATTGAAAAA-------TAAAT-TGATAA-A-AAATTATTG---TAATATTCTAGTAACAATA
gi|14 : TAGG---------CCACGGAAAATGTGAGACG--CGCATGTATTGCCAAA-CGATAACGATCTGTGTAGCAGGTTCTGTATGCAATAGTTTTCATT--AGCAACG-GTCCT---GCTGTACAGACA-GTGGTGCCA---AAGTGCAGAACTGTCACAGGACGGTTTT-TATAAAAAC--GTAATTT--AAATAATTGAAGAAGTACTACAAACAGCGTCGTCCTAT-A-ACAGG----TCTGAAGTATGTTTGTCTTTTGCATGACAATGCGCCAGCCCACA--ATACCCGTATTGTGACTTGATAT-TTTACAGTCAGAGAAGGTCACCGTccaatcgtattatttatggaacgcttct
gi|15 : CTTGAAATTTGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGATATTGAA-GTCATATACCAAG--GAGTGTGACATTTATGGGGAGGGTCA-----AATGTCGTATAGTAATATTTGTAGGTGGGTGGCAAATTTTTAATCCAGGCAACAGTACTTGAAAC-ATACTGCTTGCCCTGGTCATCCTGTAACCTGT-A--A----G-ACCAAAGA--------AAAAA-AATCTCTGAAAT-CTGAAAA--------------T-GATAC--------AT----AGTAAGAGTGTTAAAGCTTGGATAACAA-AC--------TAG-------TCATCA-AAT---T----T--TGAAAAAGCATTTAAA
gi|16 : TTCCGTTAATAATGCGAC---TTTTGTATTATTTCTCGGAAAT------ATATG----TA---TGAAACATTTTCGTGGCGTTGGTGCGTAGGCCTACTGAAACACAC-T-G------G-----T--ACATA-TCTGCCTCAAATATTCACTGCCCTTGGTGTAATGTACATTGTTTGA-----------TAG--------------T---GT--------------ATTCATACCACTGTAATACTATGCA--A--------AATG----------ACTGGCAAACGAGC-GAAAAT-TGCTTGAAACTACGGCC--TA-TGGTCGAGGTAGGTCA------AGG-TGAAGTCGAAATACATTTACCGATAGTAGTGTGACATCTct
gi|17 : tggaCT-AAGATCGGC-T-ATGT-ACCAGTGTCTTAAGGGTACTTTTGTTC-AAGAATACG-A-A--A-AATGTTTTTCAATATTTATTTGCAAAATT-GGA--TAGCG--C---G--ATTATAAAC-TTGTGTTTC---ACAT-----ATAAGAGAGTAT-CTAGAAGGAA-GT--AAAAA-------AAAATATGGT-ATA-AAATAAATA---TAGTACTCTAGCAATAATA
gi|17 : GGTGTTCCGCAAAGAAAGCGAC---TAT--TATTATTGC-TAGA----GTACTATATT----TA-atagtcgctttctttgcggaacacc
gi|18 : ctaagatcggctatgtaccagtgtcttaagggtacttttgttcaagaatacgaaaaatgtttttcaatatttatttgcaaaattggatagcgcgattataaacttgtgtttcacatataagagagtatctagaaggaagtaaaaaaaaatatggtataaaaTATTTTATAAATAATGCCAC---TGGTGTATTATTTCTTTGAAATC---TCATA------------------ACTTTGTATCGCTAGAAAG---ATC-ACTGG----TGC-AAGT----CGCTGGTT--AAA-A-TCTG--TTAAATATTCACTGACCTTGGTGCAATGTACATAGCTTTG-----------TAG--------------T---TT--------------AT--------------------TCATTAC-------ACTGTATGGTAATTACTGGCAAACAAGCTGAAAATGTGCTT
gi|19 : aaCTGTTC-ACGAATACG-A-A--A-TATGTTTTG-------------CAAAATT-GCA--T--TG--C---GCTGTTAAAAAA-GTCTGTTTT---AGTT-----AAATGGGATGAT-TTTGAAAAAATATCGAAAAAAATCGCTAAAAT-TGAT---A-TAATGATTATTGTAGTAGTCTGGTAATAATA
gi|19 : GGTGTTTCGTAAATAATGCGAT---TG--GTATTATTccaatcgcattatttacgaaacacc
gi|2 : ctgttcacgaatacgaaatatgttttgcaaaattgcattgcgctgttaaaaaagtctgttttagttaaatgggatgattttgaaaaaatatcgaaaaaaatcgctaaaattgatataatgattattgtagtagtctggtTATTTCGTTGAAATCGTGCAATATA----TA-GATCAGACAATTTGGTATCACTAGCTTG---ATC-ACTGG----TGCGT-GTTAG-AG-----CTAAAA-A-ACTGCCTCAAACCATCGCTGATCTTGGTGCAATATACTTTGCTTGAAATTGTATTCATAG--------------CACTGT--------------AT--------------------GCA--A--------AACG----------ACTGGCAAACGAGCTAAGAATGTGCTTGAAACTAGAGCC--TA-TATTCGAGGAAGGTCATTACTTGGATTGAAGTTAAAAGATTTTTACCGAAAGGTGTGTGGCATTTATGGGAAGGGTCA-----GTTGTCGTAAAGTACTATTTGTATGTGGATTACCAAATATCTATCCGGGCAACAG-----AAAAGCGTGTTGCTCACCCTGGTCGCCCTGTAAC--CAGA--GC---ATATCGAATAA---AT----AAA-AATT------ATCCTGAAAAATAGTGC-------TCGATAT--------AC----AGTAAGAGATTT--AACTCGGATGACAA-AC-TTGTCGTTAGCACAAATACATCT-AGT---T----T--TGAACAAGCATTTCAAAATTAAGAAAA-AAA-GCACGAT----GGATACCACA-------TTTG--TTGAC-A-A-ACAAAA--TAA---------AAAAAAGGGTT--GCTATGGCGAAAACGATTTG-GAAAATA-AATCAAAACCTCTTTTGAGAATATAGGTAGGAGTGATCTCGGAAAAT-CGATACG--CCCATGTTTTTCCAAA-TGTGTGTAATATGTTAAGAAGTTTATACTTGCAATATTTTCC-CT--AGTAACA-GTCCT---GCTGTTCAGACA-A-AGTGCCA---AATGGCAGAACTGTCACAGGACGG-TTTATAT----AC--GTAACTTTGAAACAATTGAAGAAGTACTACAAAAAGCGTTGCCCTAT-A-TCAGG----GCTGAAGTATGTTCGTCTTTTCCATAACTACGTGCCAGCCCACA--AAGCCCGTATTGTGAC-TGACTT-TTTGTAG
gi|2 : AA---AAACACTTGTCTAGGAAAAT----GTAC---AACC--CG-AGA-AATGCCCT-GAGATCTGC-G-TT-T-ACCCTTGTTTTGAGGGTATACCTTTTC-AAGAATACGAA-A--A-A-TGTTTT--------------CATAATTAG-A--T--TG--CACTG--TTTTAAAAT-GTGTGTTTT---AGCT-----ATAT-TAAGTAT-TTTGAAGGAA-AT-AACAAA-------GAAAT-TG-----A-ATATAATTA---TAGTATTCTAGTAGCAATAactaaaaacacttgtctaggaaaatgtacaacccgagaaatgccctgagatctgcgtttacccttgttttgagggtataccttttcaagaatacgaaaaatgttttcataattagattgcactgttttaaaatgtgtgttttagctatattaagtattttgaaggaaataacaaagaaattgaatataattatagtattctagtagcaataccaattgcattattaacataacacccc
gi|20 : tatttcgttgaaatcgtgcaatatatagatcagacaatttggtatcactagcttgatcactggtgcgtgttagagctaaaaaactgcctcaaaccatcgctgatcttggtgcaatatactttgcttgaaattgtattcatagcactgtatgcaaaacgactggcaaacgagctaagaatgtgcttgaaactagagcctatattcgaggaaggtcattacttggattgaagttaaaagatttttaccgaaaggtgtgtggcatttatgggaagggtcagttgtcgtaaagtactatttgtatgtggattaccaaatatctatccgggcaacagaaaagcgtgttgctcaccctggtcgccctgtaaccagagcatatcgaataaataaaaattatcctgaaaaatagtgctcgatatacagtaagagatttaactcggatgacaaacttgtcgttagcacaaatacatctagttttgaacaagcatttcaaaattaagaaaaaaagcacgatggataccacatttgttgacaaacaaaataaaaaaaagggttgctatggcgaaaacgatttggaaaataaatcaaaacctcttttgagaatataggtaggagtgatctcggaaaatcgatacgcccatgtttttccaaatgtgtgtaatatgttaagaagtttatacttgcaatattttccctagtaacagtcctgctgttcagacaaagtgccaaatggcagaactgtcacaggacggtttatatacgtaactttgaaacaattgaagaagtactacaaaaagcgttgccctatatcagggctgaagtatgttcgtcttttccataactacgtgccagcccacaaagcccgtattgtgactgactttttgtagactTTTTAAAATATGGATT----------------------TTAAA-A-GA--ATAGCATCGAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACA--CCCATGTATTGCCAAA-TGATTGCGATCTGTTAAGAA-GTTATGTATACccaattgcattattaacataacacccc
gi|21 : aaaatatatgggaaaacattgtttcaatttttaatactttttgccatagTC-TAGAATGCG-A-ATAA-C-AATTCT----------------AAATT-G-AATTG-CG--C---A--CTTGCAAAC-ATGTGTTT----AACT-----AAAAGGGAGACT-TTTGAAGGAA-ATCCAATAG-------GAAAT-TGAT-A-G-AAATGGTTA---TTGTACTCTAGCAACAATA
gi|21 : TGTTACGTAAGTAATGCGAT---TG--GTATTGTTGCTccaatcgcattacttacgtaacaggaac
gi|22 : tctagaatgcgaataacaattctaaattgaattgcgcacttgcaaacatgtgtttaactaaaagggagacttttgaaggaaatccaataggaaattgatagaaatggttattgtactctTGTTTTGAAGGAG----ATAA---AACT--AG-AGA-AATGCTCG-GGAATGTGA-T-AT-TTACAAGTGTCTTAAGGATATACCTTTTCAAAAAATACG-G-AT-A-T-TGTTTT--------------CAAAATT-------------------------------TG---------AGCC-----AAAGGAGAATAT-TCTGACGGAA-CTTGCAAAA-------CAAAT-TGAT-ggaac
gi|23 : TTT--------------CAAAATT-G-AATTG-TG--C---A--GTTATAAAC-ATTTGTTTC---AGCT-----AAAGGGGAGTAC-TATGAAAGA-----GTG----------------TGTC-C-A-CAATTATTA---TAGTATTCTAGTAACAA
gi|24 : ttccttttccaaaaaaaTTTAAC---AGCAGCG-GTCCTG---CCGTACAGATA-GTGGTGCCATTTGAAGGCAGAACTGTCGCAGAAAAG-TTT-TATAAAAAC--GTAATTTTGAAACCACTAAACAAGTA-TATAA----CG------TGTAA-A------------AAGTAGGTTCGTCCTTTGCAatccaatcacagtttttatggaacacccctc
gi|25 : c--AGCAATG-GTCCTGT-G--GTACAGACA-GTGGTGCCA---AAGGGCAGAATTGT-ACAGGACAG-TTT-TATAAAAAAAAGAAATTTTAAAACAATTGAAGAAGTACTGCATACAGCATCGCCCTAT-A-ACAG
gi|26 : TATGTTCGCATTTTGCATGACAACTTGCCAGTCCACA--AAACCAATATTGTGAC-CGACGT-TTTGCAGTCAGAGAAGGTCGCCGTT-------CTCG--CTC--TG-CC----C---------CAATACTT----CCA
gi|27 : GAAGTATGTTTGTCTTTTGCATGACAACACATCATCCCACA--AAGTCCATATTGTGAC-CGACTT-TTTGCAGTCAATGAAGATCACTTTT-------CTCC--GTC--AA-CC----C-T-------C-ATACTag
gi|28 : GCAACGTACATTGTCTTA-----------TAA--------------C---GTGCTTGTTACTCTGTAT--------------------ACA--T--------AATG----------ACTGGAAAAC--------ATTGTGCTGTAAATTAGGACCTATA-TATTACAGGTAGACTGTTAATTG
gi|29 : G-ATGCTGCTCACACTG-TCGTTTTGTATC--ATCA--AC---A-ACCAAAGAAAACAG--AAAAA-AA-CTGCCAAATCTTGAAAA------C-------
gi|3 : TGGG---------TCAAGGAAAATATTAGAAA--TCCATGGATTGCCAAA-CGATTGCAATCTGTAAAGAGGGTTATGTATGCAATATTTTT-ACT--AGCAATA-GTCCTG---CCGTACAGATA-GCGGTGCTA---AAGGACAAAACTGTTACACGACGG-TAT-TTTAAAAAA--GTAATTTTGAAACAACTGAAAAAGTACTACAAACAGCGTCGCCCTAT-A-ACAGG----TCTGGAGTATGTTCGTCTTTTGCATGACAACACACCATCCCATT--AAGCCTGTATTGTGAT-TGACAT-TTTGCAGTCAAAGAACTTCATCGTTCCACTCACTCCCGCTCCTAC-CCA---C-TCTACTCGCAATACTTGGGCCCGTAT----------GCCTATTT----------------T----------------T------ATT--------------TTCCAAAAACT-AAAA---ATACATATGTCAGGGACGAAACATATAT---AACT--CG-AGACA-TGCCCT-GGAATCTGC-T-CTGT-ATCAGCGTCTTAAGAGTTTACTTGTTT-AAGAATACG-ACA--A-A-CGTTTT--------------CAAAACT-GAA--TTACG--T---G--GTTAAAAGC-GTGTGGTTT---AGAT-----AAAAGGGAGTAT-TTTGGAGGAA-ATTGCAAGA-------TAAAT-TTAT-A-A-AAATG-TTA---
gi|30 : ccCGCAAAA-------GATAT-TGAT-A-A-AAATGAGTA---TAGTTTTCCAGTAACAATAatcaagggagataatagtagtgtgattcctgaaagtcagtgat
gi|30 : TGTTCGGTGAATAATGCGAT---TG--ATATTGTTAC-TGGAAAtcaatcgcattattcaccgaacatacct
gi|31 : cgcaaaagatattgataaaaatgagtatagtGACACC-CGCCAATCCATA--AACCCCTCATTTTGAC-TGACATGTTTGTTGTCAGAGAAGGTCACtacct
gi|32 : -A-A-AAATGATTA---TAG---TCTAGTCACAATA
gi|33 : GGGTGCTCCATAAATAAGGCGACGACTGCTGTATTATTTCTTGGAAATCATccgatcccattatttacgtaacacccctcgta
gi|34 : ATTATTTCTTGCAA-TCATGCAATGTA----TA-AATAAAACAACTTGGTATa
gi|35 : AAGTATGTTCGT--TTTACATGACAACGCACCAGCCCACA--Aa
gi|4 : aTAGTGGC--TA-TATTCGAGGTAGGTTATTACATGGGTTGAAA-------ACATTAACCGAGAGGTGTGTGGCGTTTACGGGGAGG--CATAAAAGATGG--TATTGTACTACTTGAAG-----------AA---------GGG-------AGTTGAAAG-ATGCTGCTCGACCAGGTCGTCCGATAAC--GTCA--AC---A-ACCAAAGAAAACATC-AAAAC-AATCCGTGAAAGCCTGAAAA------C-------T-GATGCTCG-----AAACACAGTAAGAGACTT--AGCTCGGATGACAA-AC-TTGTCGTTAACACGTGTTCGTCT-AAT---T----TAAAAAAAAAACATCTAAAAGTT------ATAAATGCATGAT----GAATACCGCA-------TTTG--TTGACAC-GAACCAAAAGCAGTC--aga
gi|4 : GTGA---------G-CCAAA-ATGA--AAAGCATCTAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACG--CGCATGTATTCCCAAA-CTATTGCGATATGTTAAAAAAGTTCTGTATGCATTGTTTTT-ACT--TGCAACG-GTCCT---GCTATACAGACAGGCGGTGCCA---AATTGGAGAACTGTCATAGGACGT-TTT-TAcgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|5 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaagGGATGTTCTGTAAATAATGCGAT---CGCCATATTATTTCGTGGTAACCGTGCAACATAATATTATAATGATACAACTTGGTACCGCTAGAGTG---ACT-ATTGG----TACGT-GTCACAGG-----T--AAA-AATCTGCCTCAAACATTCACTGACCTTGGTGCAAAGTTCATTGCTTGA-----------TAG--------------C---GT--------------ATTCCTT---------------ACA--ATGTATGATAATG----------ACTTGCAATCGAGCTGCAAATGTGTTTGAAATTAGGGCC--TA-TATTCGAGGTAGGT------------TGATGTCGAAAGCCATTTACCAAGA--TGTGAGACATTTACGGGGAGGGTCA-----GATGTCATATATTACTATTTGTAGGCGGGCGGCCAAATTGTAATCCGAGCAACAGCAGTTGAAAG-ATGCTGCTCGGCCTGGTCGTCTTGTAAC--ATCACTACCAAA-GCCAAAGAAAACGTAGAAAAA-AATCCATGACAACCTGAAAA------C-------T-GAAGCA-------A-----AACAAGAGATTT--AGCTCGGATAACAA-AC-TTATCGTTAACGCGAATTCATCTAAATATAT----T--TAAAAA
gi|6 : TGTAAC--GTCA--AC---A-ACCAAAGAACACAT--TGAAATAATCCGCGAAATCTTAAAAT------T-------T-GATG-----------------TAAGAGAGGC--AGCTCGGATG--------------CTAGCACGAATTCATAT-AAT---TCAAGT--TAGAATAGCATTTAAATGTTAAGAAAATAAATGCACGATTCACGAAGTCAAGG-------GTTGCTTTGGCGA-A-A-AAAAGAAAATG--TTTTCGAAATACAGCCAAACTATTGCGA---------tga
gi|6 : aAAGACATGGCTCCATTATTATGA---------G-TAAAA-A-AA--AAA-CTTCTACC-AGAATTTGGG---------ACGCAGAAAATGCGAAACA--CCCATGTATTGCCAAA-CGATTGTGACCAGTTTAGAAAGTTATGTATGCAATGTTTTTCACT--AGCAACG-GTCAT---GTCGTACAGACA-GCGATGCCA---AATGGCAGAACTATCACAGAGCGA-TTT-TAT-AAAAC--ATAATTCTAAAAGAATTAAAGAAGTACTACAAACAGCGTCGCCCTAT---ACAGG----GC-------TGTTCGTCTTTTGCATAACAACACaagtagtacgagttataagacatggctccattattatgagtaaaaaaaaaacttctaccagaatttgggacgcagaaaatgcgaaacacccatgtattgccaaacgattgtgaccagtttagaaagttatgtatgcaatgtttttcactagcaacggtcatgtcgtacagacagcgatgccaaatggcagaactatcacagagcgattttataaaacataattctaaaagaattaaagaagtactacaaacagcgtcgccctatacagggctgttcgtcttttgcataacaacacaa
gi|7 : atgtaacgtcaacaaccaaagaacacattgaaataatccgcgaaatcttaaaatttgatgtaagagaggcagctcggatgctagcacgaattcatataattcaagttagaatagcatttaaatgttaagaaaataaatgcacgattcacgaagtcaagggttgctttggcgaaaaaaagaaaatgttttcgaaatacagccaaactattgcgaaagtagtacgagttatCCATATATAATACGAC---TGCTGTATTATTTCTTGGAATTCATGCAATATA----TA-ATTGAAACAACCTTATATCCCTAAATTG---ATC-ACTGG----TGCAT-GTCGCAGG-----TA-AAA-A-TCAGCCTTAAATATTCATTGATCTTGGTGCAATGCACATTGCTTTA-----------AAGTGTATTCATTACACT---GT--------------AT--------------------GCA--A--------AATG----------ACTTGCAAACAAACTGAAAATCTGCTTGAAATTATGCCCGATATTATTCAAGGTAGGTCATTACTTGAGTTGAAGTTGAAaa
gi|7 : ATTTGTAGATGGGTGAACTGATTTTGATTTGGGTAACAATAGTTGAAAG-ATGCTGCTCGCACTGGTC---CTGTAAC--ATCA--AC---A-ACCAAAGAAAACATT-GAAAA-AATCTGTGAAATTCTGAAAA------C-------T-GATGCTTGATATGA-----AGTAGAAGACTT-------GGATG-----------TTGTTACCACCAGTT----T-AGT---T--------------GCATCTAAAAGTTAAGAAGACAAATGCAtttttttttttctgcaaggtaaatagcacatttgtagatgggtgaactgattttgatttgggtaacaatagttgaaagatgctgctcgcactggtcctgtaacatcaacaaccaaagaaaacattgaaaaaatctgtgaaattctgaaaactgatgcttgatatgaagtagaagacttggatgttgttaccaccagtttagttgcatctaaaagttaagaagacaaatgca
gi|8 : ccatatataatacgactgctgtattatttcttggaattcatgcaatatataattgaaacaaccttatatccctaaattgatcactggtgcatgtcgcaggtaaaaatcagccttaaatattcattgatcttggtgcaatgcacattgctttaaagtgtattcattacactgtatgcaaaatgacttgcaaacaaactgaaaatctgcttgaaattatgcccgatattattcaaggtaggtcattacttgagttgaagttgaatttttttttttctgcaaggtaaatagcacCATGAAAAATG--AGACCATCCCATGTATTGCCAAAATGAATGTGAT-TGTTAAGAAGGTTCTGTATGCATTTTCTTTCACTTAGGTAACATGTCCTG---TCATACAGATG-GCAATCACA---AAGGGCTAAACAATCACCGGACA--TTT-TATTAAAAT--GTCATATTGAAATAATTGATGAAGCACTACAAACAGCATAGTCTTGTTG-G-AGT----TCTGAATTATATTCATTTGTTGCATGACAATGCGCCAGCC-AAC--AGTCCT-TATTGTGCC-TGACCT-CTTACAGTTAGAGAAGGTCACCATT-------CTCC--TCC--ACACC----C-C-------CAATACTCA---CCAGAC----------A-----TG----------------TCCCCCTGTAATAATTAT------CTC--------------TTCCTAAAACAAAAAAAAGAAACACTTTTCTGTGAAGAA----ATAT---AACT--TGCAAA-A-TGACATAGGAATCTGA-TAAT-T-A-CAGTGT-TTAAGGGTACATATGTTG-AAAAATA
gi|9 : GCAAAATAGTCACAGAACG--TTT-TATAAA-----------------TAACTGAA------------ACAGCGTCGCC-TGTAA--CAGG----TCTGAAGTGTGATCGTCATTTGCATGACAACATGCCAGCCAAAAAGAAACCCATAGT-TCAC-TTATAT-TTTGCAGTCGGAGAAGGTCACTGTT-------CACG--CTC--A---A----C-G-------CCATACTCA---CGAGAC----------A-----TG----------------C----------------C------CTCTGTGACTATTATTTTTCCCAAATCT-AAAA---AAACAATTGCCT--TAAG-G----ATATGCAAAC---AG-AAA-A-TGTCTT-
gi|9 : gcTGCCTTAAGGATATGC---------AAACA-G-A-A--A-A-TGTCTT--------------CAATATT-GGA--T--TGTGC---G--GTTAAAAAAAGTATGTTAT---AGCT-----AAAGGGGAATTTATTTG-AGGAA-TTCGCCAAA-------C-AAT-TGAT-C-A-AAATAATTA---CAGTACTCGAGTAACAATAcaatattggattgtgcggttaaaaaaagtatgttatagctaaaggggaatttatttgaggaattcgccaaacaattgatcaaaataattacagtactcgagtaacaatacgaattgcattatttagggaacatccc
gi|9 : gcgcaaaatagtcacagaacgttttataaataactgaaacagcgtcgcctgtaacaggtctgaagtgtgatcgtcatttgcatgacaacatgccagccaaaaagaaacccatagttcacttatattttgcagtcggagaaggtcactgttcacgctcaacgccatactcacgagacatgccctctgtgactattatttttcccaaatctaaaaaaacaatGGATGTTCCCTAAATAATGCAAT---T--CGTATTGTTACTCGcgaattgcattatttagggaacatccc
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22 1111 111 111 44444444444444 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 11111 111 22222222222222 55555555555555 222222222 111111111111 1111 2222222 11 22222222 222222222 33333 333333333333 11 222222222 2222 2222 1111111 11 33333333333333 11111 444444444444444444444444444444444444444444444444444444444444444444444444444 11 111 11111 111 111111 111111 22222222222222 555555555555555555555 11111111 111
lowQualScore : 555 22 0 2 66 1 2222 000 1 0 1 1 111 6 3 33333333333333 6 6 2 0 0 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 3 2 11 4 0 0 1 1 0 0 1 44444 6 1 0 0 1 3 55 55 55 777 4 0 555 4 1 0 11111111111111 4 44444444444444 0 66 1 555555555 2 4 888888888888 1 0 1 0 7777 6666666 11 77777777 333333333 2 0 4 66666 222222222222 8 8 11 3 1 1 8 1 222222222 0 66 5 2 0 1 1 7 66 4 9999 4 0 777 0 88 4 4 666 0 1111 9999 1 666 4 1 4 6666666 66 11 5 33333333333333 6 22222 222222222222222222222222222222222222222222222222222222222222222222222222222 1 77 000 1 1 3 00000 888 66 5 3 111 2 4 0 888888 5 1 0 888 3 8 4 333333 55555555555555 111111111111111111111 22 3 6666 99999 2 3 3 4 1 33333333 3 222 3 555 1
lowQualScore : ... .. . . .. . .... ... . . . . ... . . .............. . . . . . ....................................................................................... . . . .. . . . . . . . . ..... . . . . . . .. .. .. ... . . ... . . . .............. . .............. . .. . ......... . . ............ . . . . .... ....... .. ........ ......... . . . ..... ............ . . .. . . . . . ......... . .. . . . . . . .. . .... . . ... . .. . . ... . .... .... . ... . . . ....... .. .. . .............. . ..... ........................................................................... . .. ... . . . ..... ... .. . . ... . . . ...... . . . ... . . . ...... .............. ..................... .. . .... ..... . . . . . ........ . ... . ... .
lowQualScore : 888 77 7 2 44 9 1111 999 7 3 0 0 777 7 7 00000000000000 7 7 5 7 7 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 4 5 00 0 2 1 1 4 3 7 0 33333 6 4 2 2 0 4 66 55 55 000 0 7 999 0 4 5 11111111111111 4 77777777777777 8 11 9 777777777 9 4 000000000000 4 6 7 1 0000 0000000 00 88888888 000000000 5 2 2 00000 888888888888 0 0 00 2 0 0 0 0 999999999 2 99 0 5 2 0 9 6 11 4 4444 4 9 888 1 11 0 8 222 1 9999 4444 6 444 0 0 0 2222222 99 99 0 99999999999999 4 77777 000000000000000000000000000000000000000000000000000000000000000000000000000 0 33 000 7 4 4 99999 888 99 0 4 000 9 4 2 111111 0 4 2 000 6 0 0 555555 00000000000000 777777777777777777777 99 6 7777 11111 3 6 6 4 0 00000000 3 666 3 888 8
consensus : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTCGC-G-GT--AAA-A-TCTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTGACGA-G-ACAAAAGGNAGTC-NTTTTCGAAACACGGNTCC-GCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-N-TGTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCT-----AAANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
Reference ( family-1457 ) : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGTGTCG--G-GT--AAA-A-TCTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGNCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTGACGA-G-ACAAAAGGNAGTC-TTTTTCAAAACACGGNTC--GCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-N-TGTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCT-----AAANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
gi|1 : GGTTGTTCCGTAAATAATGCGAC---TGCTGTATTCTTTCTTGCAAATCATGCCATATA----TA-AATAAAAAAACATTGTATCGCTAGAGTA---ATC-GCTGGT-------------T--AAG-A-TCTGACTCAATCATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAA--------------C---GT--------------AT--------------------GCA--A-----------ATTGACTGGCCAACGAGCTGAAAATGTGCTTGAAATTATGGCC--TA-TATTCGATGTAGGTCATTACTTGAGTTGAAATCGAAAGGCATTTACTGAGAGGTGTGTAATATTTACGGGGAAGGTCA-----GATAGTATATATAATTATTTGTTGTTGGGTAGTCAGATTTCAATCTGGACAACAGCAGCTGAAA--ATGCAGCTCGCCCTGG-CGTACTCTAAC--GCCA--AC---A-ATCACAGAAAACAT--AAAAC-AATCCTCGAAATTACGAAAG------C-------T-GATGC----------------TGAGAGATTT--AGCTCCGATGACAACAT-TG-TTGTAAGCATGAAATCATCT-AAT---T----T--TAAAAAAGGTTTTAAAAGTTTTGAAAATAAATGAACGAT----GGATATCGCA-------TTTG--TTGACGAGG-ACAAAAAGAAGTCATTTTTGAAAACTTGGGTTG-GTTATTATGA---------GATAAAA-A-GA--AAAGCATACAAC-ATAAATTGGG---------CCACGGAAAATGCGAGACG--CCCATATATAGTAAAA-TGACTGCGATCTGCTAAGAAGGTTCTGTGTGCACTACCTTTTGCT--AGCCAAG-GTCCTGCAGCCGTACAGACA-GCGGTGCCA---AAGGGCAAAACTGCCACAGGACGG-TTT-TATACAAAC--GTAACTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAATACATGTAAATCTGAAGTATGTTTGTCTTTTACATGACATTGCAACAGCTCAAAATT---CTCGTGTTGTGAC-ATCCAT-TATGCAGTCAAAGAAAGTCGCCGTT-------CTCC--CTC--AC-CC----C-T-------CTATACTAG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTTCCAAGACTGAAAG---AAACATTTGTCTGGGAAGAG----ATAT---AAGT--CG-ACA-A-TATCCT-AGGATCTGCAC-AT-T-ACCTGTGTCTCAAGGGTATATCTGTTC-AAGAGTACG-A-C--A-T-TATTTT--------------CAAAATT-G-------CG--C---G--ATTGAAAAC-GTGTGCTTT---AGAT-----AAACGGGAGTAT-TTTGAAGGAC-ATCGCATAA-------GAAAT-TAATCA-A-AAATGATTT---TAATACTCTAATAACAATA
gi|10 : CAGTGTCACCCTTTAA--CAGG----TCTGAAATATGTCTGTCTTTTGCATGACAACGTGCCAGCACACAAAG---CCTGTATTGTGGA-TAACTT-TTTGCAATC---------------T-------CTCC--CAC--AC-ACACAAC-C-------CAA-ACTAG---CTAGAT----------T-----TGGCCCTCTTTGACTATTT----------------T------CTC--------------TTCCAAAAACTAAAAA---A---GCTTGTCTGGAAAGAT----ATAT---AACTTCCG-A-A-A-TGCC----------------------------CTTAAGGGTAT---TGCTC-AAGAATATGAA-A--A-T-TGTTTT--------------CAAAATTGG-A--C--TG--C----------AAGGC-ATGTGTTTTTTCATCTATAACAAACAGGAGTAT-TTTGAAAGAA-ATCAGAAAA-------ACAAT-TTAT-C-ATAAATGGTAA---AAGTATTCTAGTACCAATAtaa
gi|11 : --------------------GCA--A-----------AATATCTGGCATACAAGCAGAAAATTTACTTGAAAATAAAGCC--TT-TATTCCAGGTAGGTCATTACTTcccatcccattacatatggaacac
gi|11 : aTCA-----AATTTTGTTAAGTACTATTTGTAGGTGAATGGCCAAATTTCAATCCTGGCAAAAGCAGCTGAAAT-ATGCTTCTCACCCTGGTCATCCTGCAAT--GTCA--AC---A-ACCAAAGTGAACAT--AAAAA-AATCTGTGAAGTCCTGAAAA------C-------T-AATGC----------------T-AGATACT-----------TGACAA-ACATT-TCGTTAGCATGAGTTTATCT-AAT---T----T--GAAAAAA-CTTCTAAATGTTAAGAAAATATATTCCTGAT----GGGCAACACATTAAAATTTTG--TTGAC-A-G----AAGGGTATTC-CTTTTCCAAAcaaattttgttaagtactatttgtaggtgaatggccaaatttcaatcctggcaaaagcagctgaaatatgcttctcaccctggtcatcctgcaatgtcaacaaccaaagtgaacataaaaaaatctgtgaagtcctgaaaactaatgctagatacttgacaaacatttcgttagcatgagtttatctaatttgaaaaaacttctaaatgttaagaaaatatattcctgatgggcaacacattaaaattttgttgacagaagggtattccttttccaaaa
gi|12 : agcaaaatatctggcatacaagcagaaaatttacttgaaaataaagcctttattccaggtaggtcattactAATTAGTGCG--TA-TATTCGAGGTAGGTCATTACTAGCGTTGAAGTTAATAGA--TTTACCTAAAGGTGTGTGCCATTTACAGGGAGGATCA-----AATGGCGTGTAGTGTTATTTGTAGGTGTGTAGTCATATTTCTATTTGTGCAACAACAGTTGAGAG-ATTCTACTGGCGCTGGTGGTCCTGTAAC--GTTA--AC---A-ACCACAGAGAAC-----------ATCCGCATTATCCTGAAAA------CCAATGCTT-GATAC--------AT----CATACGACACTT--AGCTCAGGTGACAA-CC-TT---GTAAGCAAGAGTT----------------------------CATCTAAAGGTTAAGATAATAAATGCa
gi|13 : acACTGTT-------CTCT--CTC--AC-CC----CAT-------CCATACTAG---CCAGATTTGGCCCATTG-----TG----------------T----------------TTTTTTACTC--------------TTCCCAAGAC---AAA---AAGTACTTGTCCGG-AAGGG----ATAT---AACT--CG-AGAGA-TGCCGT-GTGATCTGC-T-ATAT-ACCAGTGTCTTAAGGAAATTACTGTTC-AAGAATACG-A-A--AGA-TGTTTT--------------CAAAATTGG-A--TTGCG--T---G--GTTTAAAAC-GTTTGTTTT---AGCC-----AA-----------TCTGAAGGAA-ATTGAAAAA-------TAAAT-TGATAA-A-AAATTATTG---TAATATTCTAGTAACAATA
gi|13 : GCGTTCCATAAATAATACGAT---TG--GTATTGTTACTAGAATAT--TACAATAccaatcgtattatttatggaacgcttct
gi|14 : actgttctctctcaccccatccatactagccagatttggcccattgtgtttttttactcttcccaagacaaaaagtacttgtccggaagggatataactcgagagatgccgtgtgatctgctatataccagtgtcttaaggaaattactgttcaagaatacgaaagatgttttcaaaattggattgcgtggtttaaaacgtttgttttagccaatctgaaggaaattgaaaaataaattgataaaaaatTAGG---------CCACGGAAAATGTGAGACG--CGCATGTATTGCCAAA-CGATAACGATCTGTGTAGCAGGTTCTGTATGCAATAGTTTTCATT--AGCAACG-GTCCT---GCTGTACAGACA-GTGGTGCCA---AAGTGCAGAACTGTCACAGGACGGTTTT-TATAAAAAC--GTAATTT--AAATAATTGAAGAAGTACTACAAACAGCGTCGTCCTAT-A-ACAGG----TCTGAAGTATGTTTGTCTTTTGCATGACAATGCGCCAGCCCACAATA---CCCGTATTGTGACTTGATAT-TTTACAGTCAGAGAAGGTCACCGTttct
gi|15 : CTTGAAATTTGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGATATTGAA-GTCATATACCAAG--GAGTGTGACATTTATGGGGAGGGTCA-----AATGTCGTATAGTAATATTTGTAGGTGGGTGGCAAATTTTTAATCCAGGCAACAGTACTTGAAAC-ATACTGCTTGCCCTGGTCATCCTGTAACCTGT-A--A----G-ACCAAAGA--------AAAAA-AATCTCTGAAAT-CTGAAAA--------------T-GATAC--------AT----AGTAAGAGTGTTAAAGCTTGGATAACAA-AC--------TAG-------TCATCA-AAT---T----T--TGAAAAAGCATTTAAA
gi|16 : TTCCGTTAATAATGCGAC---TTTTGTATTATTTCTCGGAAAT------ATATG----TA---TGAAACATTTTCGTGGCGTTGGTGCGTAGGCCTACTGAAACACA-CT--G-GT--ACATA-TCTGCCTCAAATATTCACTGCCCTTGGTGTAATGTACATTGTTTGA-----------TAG--------------T---GT--------------ATTCATACCACTGTAATACTATGCA--A-----------AATGACTGGCAAACGAGC-GAAAAT-TGCTTGAAACTACGGCC--TA-TGGTCGAGGTAGGTCA------AGG-TGAAGTCGAAATACATTTACCGATAGTAGTGTGACATCTct
gi|17 : tggaCT-AAGATCGGC-T-ATGT-ACCAGTGTCTTAAGGGTACTTTTGTTC-AAGAATACG-A-A--A-AATGTTTTTCAATATTTATTTGCAAAATT-GGA--TAGCG--C---G--ATTATAAAC-TTGTGTTTC---ACAT-----ATAAGAGAGTAT-CTAGAAGGAA-GT--AAAAA-------AAAATATGGT-ATA-AAATAAATA---TAGTACTCTAGCAATAATA
gi|17 : GGTGTTCCGCAAAGAAAGCGAC---TAT--TATTATTGCTatagtcgctttctttgcggaacacc
gi|18 : ctaagatcggctatgtaccagtgtcttaagggtacttttgttcaagaatacgaaaaatgtttttcaatatttatttgcaaaattggatagcgcgattataaacttgtgtttcacatataagagagtatctagaaggaagtaaaaaaaaatatggtataaaataaatatagtactctTATTTTATAAATAATGCCAC---TGGTGTATTATTTCTTTGAAATCTC---------------------ATAACTTTGTATCGCTAGAAAG---ATC-ACTGGTGCAAGTCGCTG-GTT-AAA-A-TCTG--TTAAATATTCACTGACCTTGGTGCAATGTACATAGCTTTG-----------TAG--------------T---TT--------------AT--------------------TCATTACACTGTATGGTAATTACTGGCAAACAAGCTGAAAATGTGCTT
gi|19 : aaCTGTTC-ACGAATACG-A-A--A-TATGTTTTG-------------CAAAATT-GCA--T--TG--C---GCTGTTAAAAAA-GTCTGTTTT---AGTT-----AAATGGGATGAT-TTTGAAAAAATATCGAAAAAAATCGCTAAAAT-TGAT---A-TAATGATTATTGTAGTAGTCTGGTAATAATA
gi|19 : GGTGTTTCGTAAATAATGCGAT---TG--GTATTATTccaatcgcattatttacgaaacacc
gi|2 : ctgttcacgaatacgaaatatgttttgcaaaattgcattgcgctgttaaaaaagtctgttttagttaaatgggatgattttgaaaaaatatcgaaaaaaatcgctaaaattgatataatgattattgtagtagtctggtTATTTCGTTGAAATCGTGCAATATA----TA-GATCAGACAATTTGGTATCACTAGCTTG---ATC-ACTGGTGCGTGTTA--GAGCTAAAA-A-ACTGCCTCAAACCATCGCTGATCTTGGTGCAATATACTTTGCTTGAAATTGTATTCATAG--------------CACTGT--------------AT--------------------GCA--A-----------AACGACTGGCAAACGAGCTAAGAATGTGCTTGAAACTAGAGCC--TA-TATTCGAGGAAGGTCATTACTTGGATTGAAGTTAAAAGATTTTTACCGAAAGGTGTGTGGCATTTATGGGAAGGGTCA-----GTTGTCGTAAAGTACTATTTGTATGTGGATTACCAAATATCTATCCGGGCAACAG-----AAAAGCGTGTTGCTCACCCTGGTCGCCCTGTAAC--CAGA--GC---ATATCGAATAA---AT----AAA-AATT------ATCCTGAAAAATAGTGC-------TCGATAT--------AC----AGTAAGAGATTT--AACTCGGATGACAA-AC-TTGTCGTTAGCACAAATACATCT-AGT---T----T--TGAACAAGCATTTCAAAATTAAGAAAA-AAA-GCACGAT----GGATACCACA-------TTTG--TTGAC-A-A-ACAAAA------------TAAAAAAAAGGGTT--GCTATGGCGAAAACGATTTG-GAAAATA-AATCAAAACCTCTTTTGAGAATATAGGTAGGAGTGATCTCGGAAAAT-CGATACG--CCCATGTTTTTCCAAA-TGTGTGTAATATGTTAAGAAGTTTATACTTGCAATATTTTCC-CT--AGTAACA-GTCCT---GCTGTTCAGACA-A-AGTGCCA---AATGGCAGAACTGTCACAGGACGG-TTTATAT----AC--GTAACTTTGAAACAATTGAAGAAGTACTACAAAAAGCGTTGCCCTAT-A-TCAGG----GCTGAAGTATGTTCGTCTTTTCCATAACTACGTGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACTT-TTTGTAG
gi|2 : AA---AAACACTTGTCTAGGAAAAT----GTAC---AACC--CG-AGA-AATGCCCT-GAGATCTGC-G-TT-T-ACCCTTGTTTTGAGGGTATACCTTTTC-AAGAATACGAA-A--A-A-TGTTTT--------------CATAATTAG-A--T--TG--CACTG--TTTTAAAAT-GTGTGTTTT---AGCT-----ATAT-TAAGTAT-TTTGAAGGAA-AT-AACAAA-------GAAAT-TG-----A-ATATAATTA---TAGTATTCTAGTAGCAATAactaaaaacacttgtctaggaaaatgtacaacccgagaaatgccctgagatctgcgtttacccttgttttgagggtataccttttcaagaatacgaaaaatgttttcataattagattgcactgttttaaaatgtgtgttttagctatattaagtattttgaaggaaataacaaagaaattgaatataattatagtattctagtagcaataccaattgcattattaacataacacccc
gi|20 : tatttcgttgaaatcgtgcaatatatagatcagacaatttggtatcactagcttgatcactggtgcgtgttagagctaaaaaactgcctcaaaccatcgctgatcttggtgcaatatactttgcttgaaattgtattcatagcactgtatgcaaaacgactggcaaacgagctaagaatgtgcttgaaactagagcctatattcgaggaaggtcattacttggattgaagttaaaagatttttaccgaaaggtgtgtggcatttatgggaagggtcagttgtcgtaaagtactatttgtatgtggattaccaaatatctatccgggcaacagaaaagcgtgttgctcaccctggtcgccctgtaaccagagcatatcgaataaataaaaattatcctgaaaaatagtgctcgatatacagtaagagatttaactcggatgacaaacttgtcgttagcacaaatacatctagttttgaacaagcatttcaaaattaagaaaaaaagcacgatggataccacatttgttgacaaacaaaataaaaaaaagggttgctatggcgaaaacgatttggaaaataaatcaaaacctcttttgagaatataggtaggagtgatctcggaaaatcgatacgcccatgtttttccaaatgtgtgtaatatgttaagaagtttatacttgcaatattttccctagtaacagtcctgctgttcagacaaagtgccaaatggcagaactgtcacaggacggtttatatacgtaactttgaaacaattgaagaagtactacaaaaagcgttgccctatatcagggctgaagtatgttcgtcttttccataactacgtgccagcccacaaagcccgtattgtgactgactttttgtagactAAA-A-GA--ATAGCATCGAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACA--CCCATGTATTGCCAAA-TGATTGCGATCTGTTAAGAA-GTTATGTATACccaattgcattattaacataacacccc
gi|21 : aaaatatatgggaaaacattgtttcaatttttaatactttttgccatagttttaaaatatggattttTC-TAGAATGCG-A-ATAA-C-AATTCT----------------AAATT-G-AATTG-CG--C---A--CTTGCAAAC-ATGTGTTT----AACT-----AAAAGGGAGACT-TTTGAAGGAA-ATCCAATAG-------GAAAT-TGAT-A-G-AAATGGTTA---TTGTACTCTAGCAACAATA
gi|21 : TGTTACGTAAGTAATGCGAT---TG--GTATTGTTGC-TAGA----GTACAATAccaatcgcattacttacgtaacaggaac
gi|22 : tctagaatgcgaataacaattctaaattgaattgcgcacttgcaaacatgtgtttaactaaaagggagacttttgaaggaaatccaataggaaattgatagaaatggtTGTTTTGAAGGAG----ATAA---AACT--AG-AGA-AATGCTCG-GGAATGTGA-T-AT-TTACAAGTGTCTTAAGGATATACCTTTTCAAAAAATACG-G-AT-A-T-TGTTTT--------------CAAAATT-------------------------------TG---------AGCC-----AAAGGAGAATAT-TCTGACGGAA-CTTGCAAAA-------CAAAT-TGAT-ggaac
gi|23 : TTT--------------CAAAATT-G-AATTG-TG--C---A--GTTATAAAC-ATTTGTTTC---AGCT-----AAAGGGGAGTAC-TATGAAAGA-----GTG----------------TGTC-C-A-CAATTATTA---TAGTATTCTAGTAACAA
gi|24 : ttccttttccaaaaaaaTTTAAC---AGCAGCG-GTCCTG---CCGTACAGATA-GTGGTGCCATTTGAAGGCAGAACTGTCGCAGAAAAG-TTT-TATAAAAAC--GTAATTTTGAAACCACTAAACAAGTA-TATAA----CG------TGTAA-A------------AAGTAGGTTCGTCCTTTGCAatccaatcacagtttttatggaacacccctc
gi|25 : c--AGCAATG-GTCCTGT-G--GTACAGACA-GTGGTGCCA---AAGGGCAGAATTGT-ACAGGACAG-TTT-TATAAAAAAAAGAAATTTTAAAACAATTGAAGAAGTACTGCATACAGCATCGCCCTAT-A-ACAG
gi|26 : TATGTTCGCATTTTGCATGACAACTTGCCAGTCCACAAAA---CCAATATTGTGAC-CGACGT-TTTGCAGTCAGAGAAGGTCGCCGTT-------CTCG--CTC--TG-CC----C---------CAATACTT----CCA
gi|27 : GAAGTATGTTTGTCTTTTGCATGACAACACATCATCCCACAAAG---TCCATATTGTGAC-CGACTT-TTTGCAGTCAATGAAGATCACTTTT-------CTCC--GTC--AA-CC----C-T-------C-ATACTag
gi|28 : GCAACGTACATTGTCTTA-----------TAA--------------C---GTGCTTGTTACTCTGTAT--------------------ACA--T-----------AATGACTGGAAAAC--------ATTGTGCTGTAAATTAGGACCTATA-TATTACAGGTAGACTGTTAATTG
gi|29 : G-ATGCTGCTCACACTG-TCGTTTTGTATC--ATCA--AC---A-ACCAAAGAAAACAG--AAAAA-AA-CTGCCAAATCTTGAAAA------C-------
gi|3 : TGGG---------TCAAGGAAAATATTAGAAA--TCCATGGATTGCCAAA-CGATTGCAATCTGTAAAGAGGGTTATGTATGCAATATTTTT-ACT--AGCAATA-GTCCTG---CCGTACAGATA-GCGGTGCTA---AAGGACAAAACTGTTACACGACGG-TAT-TTTAAAAAA--GTAATTTTGAAACAACTGAAAAAGTACTACAAACAGCGTCGCCCTAT-A-ACAGG----TCTGGAGTATGTTCGTCTTTTGCATGACAACACACCATCCCATTAAG---CCTGTATTGTGAT-TGACAT-TTTGCAGTCAAAGAACTTCATCGTTCCACTCACTCCCGCTCCTAC-CCA---C-TCTACTCGCAATACTTGGGCCCGTAT----------GCCTATTT----------------T----------------T------ATT--------------TTCCAAAAACT-AAAA---ATACATATGTCAGGGACGAAACATATAT---AACT--CG-AGACA-TGCCCT-GGAATCTGC-T-CTGT-ATCAGCGTCTTAAGAGTTTACTTGTTT-AAGAATACG-ACA--A-A-CGTTTT--------------CAAAACT-GAA--TTACG--T---G--GTTAAAAGC-GTGTGGTTT---AGAT-----AAAAGGGAGTAT-TTTGGAGGAA-ATTGCAAGA-------TAAAT-TTAT-A-A-AAATG-TTA---
gi|30 : ccCGCAAAA-------GATAT-TGAT-A-A-AAATGAGTA---TAGTTTTCCAGTAACAATAatcaagggagataatagtagtgtgattcctgaaagtcagtgat
gi|30 : TGTTCGGTGAATAATGCGAT---TG--ATATTGTTAC-TGGAAAtcaatcgcattattcaccgaacatacct
gi|31 : cgcaaaagatattgataaaaatgagtatagtGACACC-CGCCAATCCATAAAC---CCCTCATTTTGAC-TGACATGTTTGTTGTCAGAGAAGGTCACtacct
gi|32 : -A-A-AAATGATTA---TAG---TCTAGTCACAATA
gi|33 : GGGTGCTCCATAAATAAGGCGACGACTGCTGTATTATTTCTTGGAAATCATccgatcccattatttacgtaacacccctcgta
gi|34 : ATTATTTCTTGCAA-TCATGCAATGTA----TA-AATAAAACAACTTGGTATa
gi|35 : AAGTATGTTCGT--TTTACATGACAACGCACCAGCCCACAAAG---a
gi|4 : aTAGTGGC--TA-TATTCGAGGTAGGTTATTACATGGGTTGAAA-------ACATTAACCGAGAGGTGTGTGGCGTTTACGGGGAGG--CATAAAAGATG--GTATTGTACTACTTGAAG-----------------AA---GGG-------AGTTGAAAG-ATGCTGCTCGACCAGGTCGTCCGATAAC--GTCA--AC---A-ACCAAAGAAAACATC-AAAAC-AATCCGTGAAAGCCTGAAAA------C-------T-GATGCTCG-----AAACACAGTAAGAGACTT--AGCTCGGATGACAA-AC-TTGTCGTTAACACGTGTTCGTCT-AAT---T----TAAAAAAAAAACATCTAAAAGTT------ATAAATGCATGAT----GAATACCGCA-------TTTG--TTGACAC-GAACCAAAAGCAGTC-a
gi|4 : GTGA---------G-CCAAA-ATGA--AAAGCATCTAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACG--CGCATGTATTCCCAAA-CTATTGCGATATGTTAAAAAAGTTCTGTATGCATTGTTTTT-ACT--TGCAACG-GTCCT---GCTATACAGACAGGCGGTGCCA---AATTGGAGAACTGTCATAGGACGT-TTT-TAcgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|5 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaagGGATGTTCTGTAAATAATGCGAT---CGCCATATTATTTCGTGGTAACCGTGCAACATAATATTATAATGATACAACTTGGTACCGCTAGAGTG---ACT-ATTGGTACGTGTCACAG-GT--AAA-AATCTGCCTCAAACATTCACTGACCTTGGTGCAAAGTTCATTGCTTGA-----------TAG--------------C---GT--------------ATTCCTT---------------ACA--ATGTATGAT---AATGACTTGCAATCGAGCTGCAAATGTGTTTGAAATTAGGGCC--TA-TATTCGAGGTAGGT------------TGATGTCGAAAGCCATTTACCAAGA--TGTGAGACATTTACGGGGAGGGTCA-----GATGTCATATATTACTATTTGTAGGCGGGCGGCCAAATTGTAATCCGAGCAACAGCAGTTGAAAG-ATGCTGCTCGGCCTGGTCGTCTTGTAAC--ATCACTACCAAA-GCCAAAGAAAACGTAGAAAAA-AATCCATGACAACCTGAAAA------C-------T-GAAGCA-------A-----AACAAGAGATTT--AGCTCGGATAACAA-AC-TTATCGTTAACGCGAATTCATCTAAATATAT----T--TAAAAA
gi|6 : TGTAAC--GTCA--AC---A-ACCAAAGAACACAT--TGAAATAATCCGCGAAATCTTAAAAT------T-------T-GATGT--------A-----AG--AGAGGC----AGCTCGGATG--------------CTAGCACGAATTCATAT-AAT---TCAAGT--TAGAATAGCATTTAAATGTTAAGAAAATAAATGCACGATTCACGAAGTCAAGG-------GTTGCTTTGGCGA-A-A-AAAAGAAAAT--GTTTTCGAAATACAGC-CAAACTATTGCGA---------tga
gi|6 : aAAGACATGGCTCC-ATTATTATGA---------G-TAAAA-A-AA--AAA-CTTCTACC-AGAATTTGGG---------ACGCAGAAAATGCGAAACA--CCCATGTATTGCCAAA-CGATTGTGACCAGTTTAGAAAGTTATGTATGCAATGTTTTTCACT--AGCAACG-GTCAT---GTCGTACAGACA-GCGATGCCA---AATGGCAGAACTATCACAGAGCGA-TTT-TAT-AAAAC--ATAATTCTAAAAGAATTAAAGAAGTACTACAAACAGCGTCGCCCTAT---ACAGG----GC-------TGTTCGTCTTTTGCATAACAACACaagtagtacgagttataagacatggctccattattatgagtaaaaaaaaaacttctaccagaatttgggacgcagaaaatgcgaaacacccatgtattgccaaacgattgtgaccagtttagaaagttatgtatgcaatgtttttcactagcaacggtcatgtcgtacagacagcgatgccaaatggcagaactatcacagagcgattttataaaacataattctaaaagaattaaagaagtactacaaacagcgtcgccctatacagggctgttcgtcttttgcataacaacacaa
gi|7 : atgtaacgtcaacaaccaaagaacacattgaaataatccgcgaaatcttaaaatttgatgtaagagaggcagctcggatgctagcacgaattcatataattcaagttagaatagcatttaaatgttaagaaaataaatgcacgattcacgaagtcaagggttgctttggcgaaaaaaagaaaatgttttcgaaatacagccaaactattgcgaaagtagtacgagttatCCATATATAATACGAC---TGCTGTATTATTTCTTGGAATTCATGCAATATA----TA-ATTGAAACAACCTTATATCCCTAAATTG---ATC-ACTGGTGCATGTCGCAG-GTA-AAA-A-TCAGCCTTAAATATTCATTGATCTTGGTGCAATGCACATTGCTTTA-----------AAGTGTATTCATTACACT---GT--------------AT--------------------GCA--A-----------AATGACTTGCAAACAAACTGAAAATCTGCTTGAAATTATGCCCGATATTATTCAAGGTAGGTCATTACTTGAGTTGAAGTTGAAaa
gi|7 : ATAGCAC-ATTTGTAGATGGGTGAACTGATTTTGATTTGGGTAACAATAGTTGAAAG-ATGCTGCTCGCACTGGTC---CTGTAAC--ATCA--AC---A-ACCAAAGAAAACATT-GAAAA-AATCTGTGAAATTCTGAAAA------C-------T-GATGCTTGATATGA-----AGTAGAAGACTT-------GGATG-----------TTGTTACCACCAGTT----T-AGT---T--------------GCATCTAAAAGTTAAGAAGACAAATGCAtttttttttttctgcaaggtaaatagcacatttgtagatgggtgaactgattttgatttgggtaacaatagttgaaagatgctgctcgcactggtcctgtaacatcaacaaccaaagaaaacattgaaaaaatctgtgaaattctgaaaactgatgcttgatatgaagtagaagacttggatgttgttaccaccagtttagttgcatctaaaagttaagaagacaaatgca
gi|8 : ccatatataatacgactgctgtattatttcttggaattcatgcaatatataattgaaacaaccttatatccctaaattgatcactggtgcatgtcgcaggtaaaaatcagccttaaatattcattgatcttggtgcaatgcacattgctttaaagtgtattcattacactgtatgcaaaatgacttgcaaacaaactgaaaatctgcttgaaattatgcccgatattattcaaggtaggtcattacttgagttgaagttgaatttttttttttctgcaaggtaaCATGAAAAATG--AGACCATCCCATGTATTGCCAAAATGAATGTGAT-TGTTAAGAAGGTTCTGTATGCATTTTCTTTCACTTAGGTAACATGTCCTG---TCATACAGATG-GCAATCACA---AAGGGCTAAACAATCACCGGACA--TTT-TATTAAAAT--GTCATATTGAAATAATTGATGAAGCACTACAAACAGCATAGTCTTGTTG-G-AGT----TCTGAATTATATTCATTTGTTGCATGACAATGCGCCAGCCAACA--G---TCCTTATTGTGCC-TGACCT-CTTACAGTTAGAGAAGGTCACCATT-------CTCC--TCC--ACACC----C-C-------CAATACTCA---CCAGAC----------A-----TG----------------TCCCCCTGTAATAATTAT------CTC--------------TTCCTAAAACAAAAAAAAGAAACACTTTTCTGTGAAGAA----ATAT---AACT--TGCAAA-A-TGACATAGGAATCTGA-TAAT-T-A-CAGTGT-TTAAGGGTACATATGTTG-AAAAATA
gi|9 : GCAAAATAGTCACAGAACG--TTT-TATAAA-----------------TAACTGAA------------ACAGCGTCGCC-TGTAA--CAGG----TCTGAAGTGTGATCGTCATTTGCATGACAACATGCCAG-CCAAAAAGAAACCCATAGT-TCAC-TTATAT-TTTGCAGTCGGAGAAGGTCACTGTT-------CACG--CTCA-AC-GC----C-----------ATACTCA---CGAGAC----------A-----TG----------------C----------------C------CTCTGTGACTATTATTTTTCCCAAATCT-AAAA---AAACAATTGCCT--TAAG-G----ATATGCAAAC---AG-AAA-A-TGTCTT-
gi|9 : gcTGCCTTAAGGATATGC---------AAACA-G-A-A--A-A-TGTCTT--------------CAATATT-GGA--T--TGTGC---G--GTTAAAAAAAGTATGTTAT---AGCT-----AAAGGGGAATTTATTTG-AGGAA-TTCGCCAAA-------C-AAT-TGAT-C-A-AAATAATTA---CAGTACTCGAGTAACAATAcaatattggattgtgcggttaaaaaaagtatgttatagctaaaggggaatttatttgaggaattcgccaaacaattgatcaaaataattacagtactcgagtaacaatacgaattgcattatttagggaacatccc
gi|9 : gcgcaaaatagtcacagaacgttttataaataactgaaacagcgtcgcctgtaacaggtctgaagtgtgatcgtcatttgcatgacaacatgccagccaaaaagaaacccatagttcacttatattttgcagtcggagaaggtcactgttcacgctcaacgccatactcacgagacatgccctctgtgactattatttttcccaaatctaaaaaaacaatGGATGTTCCCTAAATAATGCAAT---T--CGTATTGTTACTCGcgaattgcattatttagggaacatccc
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22 1111 111 111 333333333333 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 11111 111 22222222222222 55555555555555 222222222 111111111111 1111 2222222 11 22222222 1111 11111 22 333333333333 11 222222222 2222 2222 1111111 11 33333333333333 11111 444444444444444444444444444444444444444444444444444444444444444444444444444 11 111 11111 111 111111 111111 22222222222222 555555555555555555555 11111111 111
lowQualScore : 555 22 0 2 66 1 2222 000 1 0 1 1 111 6 3 555555555555 6 6 888 2 0 0 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 3 2 11 4 0 0 1 1 0 0 1 44444 4 1 0 0 1 3 55 55 55 777 4 0 555 4 1 0 11111111111111 4 44444444444444 0 66 1 555555555 2 4 888888888888 1 0 1 0 7777 6666666 11 77777777 1 1 3333 22 77777 1 11 222222222222 8 8 11 3 1 1 8 1 222222222 0 66 5 2 0 1 1 7 66 4 9999 4 0 777 0 88 4 4 666 0 1111 9999 1 666 4 1 4 6666666 66 11 5 33333333333333 6 22222 222222222222222222222222222222222222222222222222222222222222222222222222222 1 77 000 1 1 3 00000 888 66 5 3 111 2 4 0 888888 5 1 0 888 3 8 4 333333 55555555555555 111111111111111111111 22 3 6666 99999 2 3 3 4 1 33333333 3 222 3 555 1
lowQualScore : ... .. . . .. . .... ... . . . . ... . . ............ . . ... . . . ....................................................................................... . . . .. . . . . . . . . ..... . . . . . . .. .. .. ... . . ... . . . .............. . .............. . .. . ......... . . ............ . . . . .... ....... .. ........ . . .... .. ..... . .. ............ . . .. . . . . . ......... . .. . . . . . . .. . .... . . ... . .. . . ... . .... .... . ... . . . ....... .. .. . .............. . ..... ........................................................................... . .. ... . . . ..... ... .. . . ... . . . ...... . . . ... . . . ...... .............. ..................... .. . .... ..... . . . . . ........ . ... . ... .
lowQualScore : 888 77 7 2 44 9 1111 999 7 3 0 0 777 7 7 888888888888 7 7 777 5 7 7 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 4 5 00 0 2 1 1 4 3 7 0 33333 9 4 2 2 0 4 66 55 55 000 0 7 999 0 4 5 11111111111111 4 77777777777777 8 11 9 777777777 9 4 000000000000 4 6 7 1 0000 0000000 00 88888888 4 0 5555 88 88888 0 55 888888888888 0 0 00 2 0 0 0 0 999999999 2 99 0 5 2 0 9 6 11 4 4444 4 9 888 1 11 0 8 222 1 9999 4444 6 444 0 0 0 2222222 99 99 0 99999999999999 4 77777 000000000000000000000000000000000000000000000000000000000000000000000000000 0 33 000 7 4 4 99999 888 99 0 4 000 9 4 2 111111 0 4 2 000 6 0 0 555555 00000000000000 777777777777777777777 99 6 7777 11111 3 6 6 4 0 00000000 3 666 3 888 8
consensus : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTGACGA-G-ACAAAAGGAAGTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-N-TGTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCT-----AAANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
Reference ( family-1457 ) : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTGACGA-G-ACAAAAGGNAGTCNTTTTCGAAACAC--GGNTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-N-TGTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCT-----AAANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
gi|1 : GGTTGTTCCGTAAATAATGCGAC---TGCTGTATTCTTTCTTGCAAATCATGCCATATA----TA-AATAAAAAAACATTGTATCGCTAGAGTA---ATC-GCTGGT--------------T-AAG-A-T-CTGACTCAATCATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAA--------------C---GT--------------AT--------------------GCA--A-----------ATTGACTGGCCAACGAGCTGAAAATGTGCTTGAAATTATGGCC--TA-TATTCGATGTAGGTCATTACTTGAGTTGAAATCGAAAGGCATTTACTGAGAGGTGTGTAATATTTACGGGGAAGGTCA-----GATAGTATATATAATTATTTGTTGTTGGGTAGTCAGATTTCAATCTGGACAACAGCAGCTGAAA--ATGCAGCTCGCCCTGG-CGTACTCTAAC--GCCA--AC---A-ATCACAGAAAACAT--AAAAC-AATCCTCGAAATTACGAAAG------C-------T-GATGC----------------TGAGAGATTT--AGCTCCGATGACAACAT-TG-TTGTAAGCATGAAATCATCT-AAT---T----T--TAAAAAAGGTTTTAAAAGTTTTGAAAATAAATGAACGAT----GGATATCGCA-------TTTG--TTGACGAGG-ACAAAAAGAAGTCATTTTTGAAA-ACTTGGGTTGGTTATTATGA---------GATAAAA-A-GA--AAAGCATACAAC-ATAAATTGGG---------CCACGGAAAATGCGAGACG--CCCATATATAGTAAAA-TGACTGCGATCTGCTAAGAAGGTTCTGTGTGCACTACCTTTTGCT--AGCCAAG-GTCCTGCAGCCGTACAGACA-GCGGTGCCA---AAGGGCAAAACTGCCACAGGACGG-TTT-TATACAAAC--GTAACTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAATACATGTAAATCTGAAGTATGTTTGTCTTTTACATGACATTGCAACAGCTCAAAATT---CTCGTGTTGTGAC-ATCCAT-TATGCAGTCAAAGAAAGTCGCCGTT-------CTCC--CTC--AC-CC----C-T-------CTATACTAG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTTCCAAGACTGAAAG---AAACATTTGTCTGGGAAGAG----ATAT---AAGT--CG-ACA-A-TATCCT-AGGATCTGCAC-AT-T-ACCTGTGTCTCAAGGGTATATCTGTTC-AAGAGTACG-A-C--A-T-TATTTT--------------CAAAATT-G-------CG--C---G--ATTGAAAAC-GTGTGCTTT---AGAT-----AAACGGGAGTAT-TTTGAAGGAC-ATCGCATAA-------GAAAT-TAATCA-A-AAATGATTT---TAATACTCTAATAACAATA
gi|10 : CAGTGTCACCCTTTAA--CAGG----TCTGAAATATGTCTGTCTTTTGCATGACAACGTGCCAGCACACAAAG---CCTGTATTGTGGA-TAACTT-TTTGCAATC---------------T-------CTCC--CAC--AC-ACACAAC-C-------CAA-ACTAG---CTAGAT----------T-----TGGCCCTCTTTGACTATTT----------------T------CTC--------------TTCCAAAAACTAAAAA---A---GCTTGTCTGGAAAGAT----ATAT---AACTTCCG-A-A-A-TGCC----------------------------CTTAAGGGTAT---TGCTC-AAGAATATGAA-A--A-T-TGTTTT--------------CAAAATTGG-A--C--TG--C----------AAGGC-ATGTGTTTTTTCATCTATAACAAACAGGAGTAT-TTTGAAAGAA-ATCAGAAAA-------ACAAT-TTAT-C-ATAAATGGTAA---AAGTATTCTAGTACCAATAtaa
gi|11 : --------------------GCA--A-----------AATATCTGGCATACAAGCAGAAAATTTACTTGAAAATAAAGCC--TT-TATTCCAGGTAGGTCATTACTTcccatcccattacatatggaacac
gi|11 : aTCA-----AATTTTGTTAAGTACTATTTGTAGGTGAATGGCCAAATTTCAATCCTGGCAAAAGCAGCTGAAAT-ATGCTTCTCACCCTGGTCATCCTGCAAT--GTCA--AC---A-ACCAAAGTGAACAT--AAAAA-AATCTGTGAAGTCCTGAAAA------C-------T-AATGC----------------T-AGATACT-----------TGACAA-ACATT-TCGTTAGCATGAGTTTATCT-AAT---T----T--GAAAAAA-CTTCTAAATGTTAAGAAAATATATTCCTGAT----GGGCAACACATTAAAATTTTG--TTGAC-A-G----AAGGGTATTCCTTTTCCAAAcaaattttgttaagtactatttgtaggtgaatggccaaatttcaatcctggcaaaagcagctgaaatatgcttctcaccctggtcatcctgcaatgtcaacaaccaaagtgaacataaaaaaatctgtgaagtcctgaaaactaatgctagatacttgacaaacatttcgttagcatgagtttatctaatttgaaaaaacttctaaatgttaagaaaatatattcctgatgggcaacacattaaaattttgttgacagaagggtattccttttccaaaa
gi|12 : agcaaaatatctggcatacaagcagaaaatttacttgaaaataaagcctttattccaggtaggtcattactAATTAGTGCG--TA-TATTCGAGGTAGGTCATTACTAGCGTTGAAGTTAATAGA--TTTACCTAAAGGTGTGTGCCATTTACAGGGAGGATCA-----AATGGCGTGTAGTGTTATTTGTAGGTGTGTAGTCATATTTCTATTTGTGCAACAACAGTTGAGAG-ATTCTACTGGCGCTGGTGGTCCTGTAAC--GTTA--AC---A-ACCACAGAGAAC-----------ATCCGCATTATCCTGAAAA------CCAATGCTT-GATAC--------AT----CATACGACACTT--AGCTCAGGTGACAA-CC-TT---GTAAGCAAGAGTT----------------------------CATCTAAAGGTTAAGATAATAAATGCa
gi|13 : acACTGTT-------CTCT--CTC--AC-CC----CAT-------CCATACTAG---CCAGATTTGGCCCATTG-----TG----------------T----------------TTTTTTACTC--------------TTCCCAAGAC---AAA---AAGTACTTGTCCGG-AAGGG----ATAT---AACT--CG-AGAGA-TGCCGT-GTGATCTGC-T-ATAT-ACCAGTGTCTTAAGGAAATTACTGTTC-AAGAATACG-A-A--AGA-TGTTTT--------------CAAAATTGG-A--TTGCG--T---G--GTTTAAAAC-GTTTGTTTT---AGCC-----AA-----------TCTGAAGGAA-ATTGAAAAA-------TAAAT-TGATAA-A-AAATTATTG---TAATATTCTAGTAACAATA
gi|13 : GCGTTCCATAAATAATACGAT---TG--GTATTGTTACTAGAATAT--TACAATAccaatcgtattatttatggaacgcttct
gi|14 : actgttctctctcaccccatccatactagccagatttggcccattgtgtttttttactcttcccaagacaaaaagtacttgtccggaagggatataactcgagagatgccgtgtgatctgctatataccagtgtcttaaggaaattactgttcaagaatacgaaagatgttttcaaaattggattgcgtggtttaaaacgtttgttttagccaatctgaaggaaattgaaaaataaattgataaaaaatTAGG---------CCACGGAAAATGTGAGACG--CGCATGTATTGCCAAA-CGATAACGATCTGTGTAGCAGGTTCTGTATGCAATAGTTTTCATT--AGCAACG-GTCCT---GCTGTACAGACA-GTGGTGCCA---AAGTGCAGAACTGTCACAGGACGGTTTT-TATAAAAAC--GTAATTT--AAATAATTGAAGAAGTACTACAAACAGCGTCGTCCTAT-A-ACAGG----TCTGAAGTATGTTTGTCTTTTGCATGACAATGCGCCAGCCCACAATA---CCCGTATTGTGACTTGATAT-TTTACAGTCAGAGAAGGTCACCGTttct
gi|15 : CTTGAAATTTGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGATATTGAA-GTCATATACCAAG--GAGTGTGACATTTATGGGGAGGGTCA-----AATGTCGTATAGTAATATTTGTAGGTGGGTGGCAAATTTTTAATCCAGGCAACAGTACTTGAAAC-ATACTGCTTGCCCTGGTCATCCTGTAACCTGT-A--A----G-ACCAAAGA--------AAAAA-AATCTCTGAAAT-CTGAAAA--------------T-GATAC--------AT----AGTAAGAGTGTTAAAGCTTGGATAACAA-AC--------TAG-------TCATCA-AAT---T----T--TGAAAAAGCATTTAAA
gi|16 : TTCCGTTAATAATGCGAC---TTTTGTATTATTTCTCGGAAAT------ATATG----TA---TGAAACATTTTCGTGGCGTTGGTGCGTAGGCCTACTGAAACACACT-G---G-T-ACATA-T-CTGCCTCAAATATTCACTGCCCTTGGTGTAATGTACATTGTTTGA-----------TAG--------------T---GT--------------ATTCATACCACTGTAATACTATGCA--A-----------AATGACTGGCAAACGAGC-GAAAAT-TGCTTGAAACTACGGCC--TA-TGGTCGAGGTAGGTCA------AGG-TGAAGTCGAAATACATTTACCGATAGTAGTGTGACATCTct
gi|17 : tggaCT-AAGATCGGC-T-ATGT-ACCAGTGTCTTAAGGGTACTTTTGTTC-AAGAATACG-A-A--A-AATGTTTTTCAATATTTATTTGCAAAATT-GGA--TAGCG--C---G--ATTATAAAC-TTGTGTTTC---ACAT-----ATAAGAGAGTAT-CTAGAAGGAA-GT--AAAAA-------AAAATATGGT-ATA-AAATAAATA---TAGTACTCTAGCAATAATA
gi|17 : GGTGTTCCGCAAAGAAAGCGAC---TAT--TATTATTGCTatagtcgctttctttgcggaacacc
gi|18 : ctaagatcggctatgtaccagtgtcttaagggtacttttgttcaagaatacgaaaaatgtttttcaatatttatttgcaaaattggatagcgcgattataaacttgtgtttcacatataagagagtatctagaaggaagtaaaaaaaaatatggtataaaataaatatagtactctTATTTTATAAATAATGCCAC---TGGTGTATTATTTCTTTGAAATCTC---------------------ATAACTTTGTATCGCTAGAAAG---ATC-ACTGGTGCAAGTC-GCTGGTT-AAA-A-T-CTG--TTAAATATTCACTGACCTTGGTGCAATGTACATAGCTTTG-----------TAG--------------T---TT--------------AT--------------------TCATTACACTGTATGGTAATTACTGGCAAACAAGCTGAAAATGTGCTT
gi|19 : aaCTGTTC-ACGAATACG-A-A--A-TATGTTTTG-------------CAAAATT-GCA--T--TG--C---GCTGTTAAAAAA-GTCTGTTTT---AGTT-----AAATGGGATGAT-TTTGAAAAAATATCGAAAAAAATCGCTAAAAT-TGAT---A-TAATGATTATTGTAGTAGTCTGGTAATAATA
gi|19 : GGTGTTTCGTAAATAATGCGAT---TG--GTATTATTccaatcgcattatttacgaaacacc
gi|2 : ctgttcacgaatacgaaatatgttttgcaaaattgcattgcgctgttaaaaaagtctgttttagttaaatgggatgattttgaaaaaatatcgaaaaaaatcgctaaaattgatataatgattattgtagtagtctggtTATTTCGTTGAAATCGTGCAATATA----TA-GATCAGACAATTTGGTATCACTAGCTTG---ATC-ACTGGTGCGTGTTAGA-GC-T-AAA-A-AACTGCCTCAAACCATCGCTGATCTTGGTGCAATATACTTTGCTTGAAATTGTATTCATAG--------------CACTGT--------------AT--------------------GCA--A-----------AACGACTGGCAAACGAGCTAAGAATGTGCTTGAAACTAGAGCC--TA-TATTCGAGGAAGGTCATTACTTGGATTGAAGTTAAAAGATTTTTACCGAAAGGTGTGTGGCATTTATGGGAAGGGTCA-----GTTGTCGTAAAGTACTATTTGTATGTGGATTACCAAATATCTATCCGGGCAACAG-----AAAAGCGTGTTGCTCACCCTGGTCGCCCTGTAAC--CAGA--GC---ATATCGAATAA---AT----AAA-AATT------ATCCTGAAAAATAGTGC-------TCGATAT--------AC----AGTAAGAGATTT--AACTCGGATGACAA-AC-TTGTCGTTAGCACAAATACATCT-AGT---T----T--TGAACAAGCATTTCAAAATTAAGAAAA-AAA-GCACGAT----GGATACCACA-------TTTG--TTGAC-A-A-ACAAAATAAA----------AAAAAG--GGTT--GCTATGGCGAAAACGATTTG-GAAAATA-AATCAAAACCTCTTTTGAGAATATAGGTAGGAGTGATCTCGGAAAAT-CGATACG--CCCATGTTTTTCCAAA-TGTGTGTAATATGTTAAGAAGTTTATACTTGCAATATTTTCC-CT--AGTAACA-GTCCT---GCTGTTCAGACA-A-AGTGCCA---AATGGCAGAACTGTCACAGGACGG-TTTATAT----AC--GTAACTTTGAAACAATTGAAGAAGTACTACAAAAAGCGTTGCCCTAT-A-TCAGG----GCTGAAGTATGTTCGTCTTTTCCATAACTACGTGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACTT-TTTGTAG
gi|2 : AA---AAACACTTGTCTAGGAAAAT----GTAC---AACC--CG-AGA-AATGCCCT-GAGATCTGC-G-TT-T-ACCCTTGTTTTGAGGGTATACCTTTTC-AAGAATACGAA-A--A-A-TGTTTT--------------CATAATTAG-A--T--TG--CACTG--TTTTAAAAT-GTGTGTTTT---AGCT-----ATAT-TAAGTAT-TTTGAAGGAA-AT-AACAAA-------GAAAT-TG-----A-ATATAATTA---TAGTATTCTAGTAGCAATAactaaaaacacttgtctaggaaaatgtacaacccgagaaatgccctgagatctgcgtttacccttgttttgagggtataccttttcaagaatacgaaaaatgttttcataattagattgcactgttttaaaatgtgtgttttagctatattaagtattttgaaggaaataacaaagaaattgaatataattatagtattctagtagcaataccaattgcattattaacataacacccc
gi|20 : tatttcgttgaaatcgtgcaatatatagatcagacaatttggtatcactagcttgatcactggtgcgtgttagagctaaaaaactgcctcaaaccatcgctgatcttggtgcaatatactttgcttgaaattgtattcatagcactgtatgcaaaacgactggcaaacgagctaagaatgtgcttgaaactagagcctatattcgaggaaggtcattacttggattgaagttaaaagatttttaccgaaaggtgtgtggcatttatgggaagggtcagttgtcgtaaagtactatttgtatgtggattaccaaatatctatccgggcaacagaaaagcgtgttgctcaccctggtcgccctgtaaccagagcatatcgaataaataaaaattatcctgaaaaatagtgctcgatatacagtaagagatttaactcggatgacaaacttgtcgttagcacaaatacatctagttttgaacaagcatttcaaaattaagaaaaaaagcacgatggataccacatttgttgacaaacaaaataaaaaaaagggttgctatggcgaaaacgatttggaaaataaatcaaaacctcttttgagaatataggtaggagtgatctcggaaaatcgatacgcccatgtttttccaaatgtgtgtaatatgttaagaagtttatacttgcaatattttccctagtaacagtcctgctgttcagacaaagtgccaaatggcagaactgtcacaggacggtttatatacgtaactttgaaacaattgaagaagtactacaaaaagcgttgccctatatcagggctgaagtatgttcgtcttttccataactacgtgccagcccacaaagcccgtattgtgactgactttttgtagactAAA-A-GA--ATAGCATCGAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACA--CCCATGTATTGCCAAA-TGATTGCGATCTGTTAAGAA-GTTATGTATACccaattgcattattaacataacacccc
gi|21 : aaaatatatgggaaaacattgtttcaatttttaatactttttgccatagttttaaaatatggattttTC-TAGAATGCG-A-ATAA-C-AATTCT----------------AAATT-G-AATTG-CG--C---A--CTTGCAAAC-ATGTGTTT----AACT-----AAAAGGGAGACT-TTTGAAGGAA-ATCCAATAG-------GAAAT-TGAT-A-G-AAATGGTTA---TTGTACTCTAGCAACAATA
gi|21 : TGTTACGTAAGTAATGCGAT---TG--GTATTGTTGC-TAGA----GTACAATAccaatcgcattacttacgtaacaggaac
gi|22 : tctagaatgcgaataacaattctaaattgaattgcgcacttgcaaacatgtgtttaactaaaagggagacttttgaaggaaatccaataggaaattgatagaaatggtTGTTTTGAAGGAG----ATAA---AACT--AG-AGA-AATGCTCG-GGAATGTGA-T-AT-TTACAAGTGTCTTAAGGATATACCTTTTCAAAAAATACG-G-AT-A-T-TGTTTT--------------CAAAATT-------------------------------TG---------AGCC-----AAAGGAGAATAT-TCTGACGGAA-CTTGCAAAA-------CAAAT-TGAT-ggaac
gi|23 : TTT--------------CAAAATT-G-AATTG-TG--C---A--GTTATAAAC-ATTTGTTTC---AGCT-----AAAGGGGAGTAC-TATGAAAGA-----GTG----------------TGTC-C-A-CAATTATTA---TAGTATTCTAGTAACAA
gi|24 : ttccttttccaaaaaaaTTTAAC---AGCAGCG-GTCCTG---CCGTACAGATA-GTGGTGCCATTTGAAGGCAGAACTGTCGCAGAAAAG-TTT-TATAAAAAC--GTAATTTTGAAACCACTAAACAAGTA-TATAA----CG------TGTAA-A------------AAGTAGGTTCGTCCTTTGCAatccaatcacagtttttatggaacacccctc
gi|25 : c--AGCAATG-GTCCTGT-G--GTACAGACA-GTGGTGCCA---AAGGGCAGAATTGT-ACAGGACAG-TTT-TATAAAAAAAAGAAATTTTAAAACAATTGAAGAAGTACTGCATACAGCATCGCCCTAT-A-ACAG
gi|26 : TATGTTCGCATTTTGCATGACAACTTGCCAGTCCACAAAA---CCAATATTGTGAC-CGACGT-TTTGCAGTCAGAGAAGGTCGCCGTT-------CTCG--CTC--TG-CC----C---------CAATACTT----CCA
gi|27 : GAAGTATGTTTGTCTTTTGCATGACAACACATCATCCCACAAAG---TCCATATTGTGAC-CGACTT-TTTGCAGTCAATGAAGATCACTTTT-------CTCC--GTC--AA-CC----C-T-------C-ATACTag
gi|28 : GCAACGTACATTGTCTTA-----------TAA--------------C---GTGCTTGTTACTCTGTAT--------------------ACA--T-----------AATGACTGGAAAAC--------ATTGTGCTGTAAATTAGGACCTATA-TATTACAGGTAGACTGTTAATTG
gi|29 : G-ATGCTGCTCACACTG-TCGTTTTGTATC--ATCA--AC---A-ACCAAAGAAAACAG--AAAAA-AA-CTGCCAAATCTTGAAAA------C-------
gi|3 : TGGG---------TCAAGGAAAATATTAGAAA--TCCATGGATTGCCAAA-CGATTGCAATCTGTAAAGAGGGTTATGTATGCAATATTTTT-ACT--AGCAATA-GTCCTG---CCGTACAGATA-GCGGTGCTA---AAGGACAAAACTGTTACACGACGG-TAT-TTTAAAAAA--GTAATTTTGAAACAACTGAAAAAGTACTACAAACAGCGTCGCCCTAT-A-ACAGG----TCTGGAGTATGTTCGTCTTTTGCATGACAACACACCATCCCATTAAG---CCTGTATTGTGAT-TGACAT-TTTGCAGTCAAAGAACTTCATCGTTCCACTCACTCCCGCTCCTAC-CCA---C-TCTACTCGCAATACTTGGGCCCGTAT----------GCCTATTT----------------T----------------T------ATT--------------TTCCAAAAACT-AAAA---ATACATATGTCAGGGACGAAACATATAT---AACT--CG-AGACA-TGCCCT-GGAATCTGC-T-CTGT-ATCAGCGTCTTAAGAGTTTACTTGTTT-AAGAATACG-ACA--A-A-CGTTTT--------------CAAAACT-GAA--TTACG--T---G--GTTAAAAGC-GTGTGGTTT---AGAT-----AAAAGGGAGTAT-TTTGGAGGAA-ATTGCAAGA-------TAAAT-TTAT-A-A-AAATG-TTA---
gi|30 : ccCGCAAAA-------GATAT-TGAT-A-A-AAATGAGTA---TAGTTTTCCAGTAACAATAatcaagggagataatagtagtgtgattcctgaaagtcagtgat
gi|30 : TGTTCGGTGAATAATGCGAT---TG--ATATTGTTAC-TGGAAAtcaatcgcattattcaccgaacatacct
gi|31 : cgcaaaagatattgataaaaatgagtatagtGACACC-CGCCAATCCATAAAC---CCCTCATTTTGAC-TGACATGTTTGTTGTCAGAGAAGGTCACtacct
gi|32 : -A-A-AAATGATTA---TAG---TCTAGTCACAATA
gi|33 : GGGTGCTCCATAAATAAGGCGACGACTGCTGTATTATTTCTTGGAAATCATccgatcccattatttacgtaacacccctcgta
gi|34 : ATTATTTCTTGCAA-TCATGCAATGTA----TA-AATAAAACAACTTGGTATa
gi|35 : AAGTATGTTCGT--TTTACATGACAACGCACCAGCCCACAAAG---a
gi|4 : aTAGTGGC--TA-TATTCGAGGTAGGTTATTACATGGGTTGAAA-------ACATTAACCGAGAGGTGTGTGGCGTTTACGGGGAGG--CATAAAAGATG--GTATTGTACTACTTGAAG-----------------AA---GGG-------AGTTGAAAG-ATGCTGCTCGACCAGGTCGTCCGATAAC--GTCA--AC---A-ACCAAAGAAAACATC-AAAAC-AATCCGTGAAAGCCTGAAAA------C-------T-GATGCTCG-----AAACACAGTAAGAGACTT--AGCTCGGATGACAA-AC-TTGTCGTTAACACGTGTTCGTCT-AAT---T----TAAAAAAAAAACATCTAAAAGTT------ATAAATGCATGAT----GAATACCGCA-------TTTG--TTGACAC-GAACCAAAAGCAGTCa
gi|4 : GTGA---------G-CCAAA-ATGA--AAAGCATCTAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACG--CGCATGTATTCCCAAA-CTATTGCGATATGTTAAAAAAGTTCTGTATGCATTGTTTTT-ACT--TGCAACG-GTCCT---GCTATACAGACAGGCGGTGCCA---AATTGGAGAACTGTCATAGGACGT-TTT-TAcgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|5 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaagGGATGTTCTGTAAATAATGCGAT---CGCCATATTATTTCGTGGTAACCGTGCAACATAATATTATAATGATACAACTTGGTACCGCTAGAGTG---ACT-ATTGGTACGTGTC-ACAGG-T-AAA-AAT-CTGCCTCAAACATTCACTGACCTTGGTGCAAAGTTCATTGCTTGA-----------TAG--------------C---GT--------------ATTCCTT---------------ACA--ATGTATGAT---AATGACTTGCAATCGAGCTGCAAATGTGTTTGAAATTAGGGCC--TA-TATTCGAGGTAGGT------------TGATGTCGAAAGCCATTTACCAAGA--TGTGAGACATTTACGGGGAGGGTCA-----GATGTCATATATTACTATTTGTAGGCGGGCGGCCAAATTGTAATCCGAGCAACAGCAGTTGAAAG-ATGCTGCTCGGCCTGGTCGTCTTGTAAC--ATCACTACCAAA-GCCAAAGAAAACGTAGAAAAA-AATCCATGACAACCTGAAAA------C-------T-GAAGCA-------A-----AACAAGAGATTT--AGCTCGGATAACAA-AC-TTATCGTTAACGCGAATTCATCTAAATATAT----T--TAAAAA
gi|6 : TGTAAC--GTCA--AC---A-ACCAAAGAACACAT--TGAAATAATCCGCGAAATCTTAAAAT------T-------T-GATGT--------A-----AG--AGAGGC----AGCTCGGATG--------------CTAGCACGAATTCATAT-AAT---TCAAGT--TAGAATAGCATTTAAATGTTAAGAAAATAAATGCACGATTCACGAAGTCAAGG-------GTTGCTTTGGCGA-A-A-AAAAGAAAAT-GTTTTCGAAATAC--AGCCAAACTATTGCGA---------tga
gi|6 : aAGACAT--GGCTCCATTATTATGA---------G-TAAAA-A-AA--AAA-CTTCTACC-AGAATTTGGG---------ACGCAGAAAATGCGAAACA--CCCATGTATTGCCAAA-CGATTGTGACCAGTTTAGAAAGTTATGTATGCAATGTTTTTCACT--AGCAACG-GTCAT---GTCGTACAGACA-GCGATGCCA---AATGGCAGAACTATCACAGAGCGA-TTT-TAT-AAAAC--ATAATTCTAAAAGAATTAAAGAAGTACTACAAACAGCGTCGCCCTAT---ACAGG----GC-------TGTTCGTCTTTTGCATAACAACACaagtagtacgagttataagacatggctccattattatgagtaaaaaaaaaacttctaccagaatttgggacgcagaaaatgcgaaacacccatgtattgccaaacgattgtgaccagtttagaaagttatgtatgcaatgtttttcactagcaacggtcatgtcgtacagacagcgatgccaaatggcagaactatcacagagcgattttataaaacataattctaaaagaattaaagaagtactacaaacagcgtcgccctatacagggctgttcgtcttttgcataacaacacaa
gi|7 : atgtaacgtcaacaaccaaagaacacattgaaataatccgcgaaatcttaaaatttgatgtaagagaggcagctcggatgctagcacgaattcatataattcaagttagaatagcatttaaatgttaagaaaataaatgcacgattcacgaagtcaagggttgctttggcgaaaaaaagaaaatgttttcgaaatacagccaaactattgcgaaagtagtacgagttataCCATATATAATACGAC---TGCTGTATTATTTCTTGGAATTCATGCAATATA----TA-ATTGAAACAACCTTATATCCCTAAATTG---ATC-ACTGGTGCATGTC-GCAGG-TAAAA-A-T-CAGCCTTAAATATTCATTGATCTTGGTGCAATGCACATTGCTTTA-----------AAGTGTATTCATTACACT---GT--------------AT--------------------GCA--A-----------AATGACTTGCAAACAAACTGAAAATCTGCTTGAAATTATGCCCGATATTATTCAAGGTAGGTCATTACTTGAGTTGAAGTTGAAaa
gi|7 : ATAGCAC-ATTTGTAGATGGGTGAACTGATTTTGATTTGGGTAACAATAGTTGAAAG-ATGCTGCTCGCACTGGTC---CTGTAAC--ATCA--AC---A-ACCAAAGAAAACATT-GAAAA-AATCTGTGAAATTCTGAAAA------C-------T-GATGCTTGATATGA-----AGTAGAAGACTT-------GGATG-----------TTGTTACCACCAGTT----T-AGT---T--------------GCATCTAAAAGTTAAGAAGACAAATGCAtttttttttttctgcaaggtaaatagcacatttgtagatgggtgaactgattttgatttgggtaacaatagttgaaagatgctgctcgcactggtcctgtaacatcaacaaccaaagaaaacattgaaaaaatctgtgaaattctgaaaactgatgcttgatatgaagtagaagacttggatgttgttaccaccagtttagttgcatctaaaagttaagaagacaaatgca
gi|8 : ccatatataatacgactgctgtattatttcttggaattcatgcaatatataattgaaacaaccttatatccctaaattgatcactggtgcatgtcgcaggtaaaaatcagccttaaatattcattgatcttggtgcaatgcacattgctttaaagtgtattcattacactgtatgcaaaatgacttgcaaacaaactgaaaatctgcttgaaattatgcccgatattattcaaggtaggtcattacttgagttgaagttgaatttttttttttctgcaaggtaaCATGAAAAATG--AGACCATCCCATGTATTGCCAAAATGAATGTGAT-TGTTAAGAAGGTTCTGTATGCATTTTCTTTCACTTAGGTAACATGTCCTG---TCATACAGATG-GCAATCACA---AAGGGCTAAACAATCACCGGACA--TTT-TATTAAAAT--GTCATATTGAAATAATTGATGAAGCACTACAAACAGCATAGTCTTGTTG-G-AGT----TCTGAATTATATTCATTTGTTGCATGACAATGCGCCAGCCAACA--G---TCCTTATTGTGCC-TGACCT-CTTACAGTTAGAGAAGGTCACCATT-------CTCC--TCC--ACACC----C-C-------CAATACTCA---CCAGAC----------A-----TG----------------TCCCCCTGTAATAATTAT------CTC--------------TTCCTAAAACAAAAAAAAGAAACACTTTTCTGTGAAGAA----ATAT---AACT--TGCAAA-A-TGACATAGGAATCTGA-TAAT-T-A-CAGTGT-TTAAGGGTACATATGTTG-AAAAATA
gi|9 : GCAAAATAGTCACAGAACG--TTT-TATAAA-----------------TAACTGAA------------ACAGCGTCGCC-TGTAA--CAGG----TCTGAAGTGTGATCGTCATTTGCATGACAACATGCCAG-CCAAAAAGAAACCCATAGT-TCAC-TTATAT-TTTGCAGTCGGAGAAGGTCACTGTT-------CACG--CTCA-AC-GC----C-----------ATACTCA---CGAGAC----------A-----TG----------------C----------------C------CTCTGTGACTATTATTTTTCCCAAATCT-AAAA---AAACAATTGCCT--TAAG-G----ATATGCAAAC---AG-AAA-A-TGTCTT-
gi|9 : gcTGCCTTAAGGATATGC---------AAACA-G-A-A--A-A-TGTCTT--------------CAATATT-GGA--T--TGTGC---G--GTTAAAAAAAGTATGTTAT---AGCT-----AAAGGGGAATTTATTTG-AGGAA-TTCGCCAAA-------C-AAT-TGAT-C-A-AAATAATTA---CAGTACTCGAGTAACAATAcaatattggattgtgcggttaaaaaaagtatgttatagctaaaggggaatttatttgaggaattcgccaaacaattgatcaaaataattacagtactcgagtaacaatacgaattgcattatttagggaacatccc
gi|9 : gcgcaaaatagtcacagaacgttttataaataactgaaacagcgtcgcctgtaacaggtctgaagtgtgatcgtcatttgcatgacaacatgccagccaaaaagaaacccatagttcacttatattttgcagtcggagaaggtcactgttcacgctcaacgccatactcacgagacatgccctctgtgactattatttttcccaaatctaaaaaaacaatGGATGTTCCCTAAATAATGCAAT---T--CGTATTGTTACTCGcgaattgcattatttagggaacatccc
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22 1111 111 111 333333333333 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 11111 111 22222222222222 55555555555555 222222222 111111111111 1111 2222222 11 11 111111 2222 11111 22 333333333333 11 222222222 2222 2222 1111111 11 33333333333333 11111 444444444444444444444444444444444444444444444444444444444444444444444444444 11 111 11111 111 111111 111111 22222222222222 555555555555555555555 11111111 111
lowQualScore : 555 22 0 2 66 1 2222 000 1 0 1 1 111 6 3 555555555555 6 6 888 2 0 0 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 3 2 11 4 0 0 1 1 0 0 1 44444 4 1 0 0 1 3 55 55 55 777 4 0 555 4 1 0 11111111111111 4 44444444444444 0 66 1 555555555 2 4 888888888888 1 0 1 0 7777 6666666 11 11 999999 5555 22 55555 0 11 222222222222 8 8 11 3 1 1 8 1 222222222 0 66 5 2 0 1 1 7 66 4 9999 4 0 777 0 88 4 4 666 0 1111 9999 1 666 4 1 4 6666666 66 11 5 33333333333333 6 22222 222222222222222222222222222222222222222222222222222222222222222222222222222 1 77 000 1 1 3 00000 888 66 5 3 111 2 4 0 888888 5 1 0 888 3 8 4 333333 55555555555555 111111111111111111111 22 3 6666 99999 2 3 3 4 1 33333333 3 222 3 555 1
lowQualScore : ... .. . . .. . .... ... . . . . ... . . ............ . . ... . . . ....................................................................................... . . . .. . . . . . . . . ..... . . . . . . .. .. .. ... . . ... . . . .............. . .............. . .. . ......... . . ............ . . . . .... ....... .. .. ...... .... .. ..... . .. ............ . . .. . . . . . ......... . .. . . . . . . .. . .... . . ... . .. . . ... . .... .... . ... . . . ....... .. .. . .............. . ..... ........................................................................... . .. ... . . . ..... ... .. . . ... . . . ...... . . . ... . . . ...... .............. ..................... .. . .... ..... . . . . . ........ . ... . ... .
lowQualScore : 888 77 7 2 44 9 1111 999 7 3 0 0 777 7 7 888888888888 7 7 777 5 7 7 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 4 5 00 0 2 1 1 4 3 7 0 33333 9 4 2 2 0 4 66 55 55 000 0 7 999 0 4 5 11111111111111 4 77777777777777 8 11 9 777777777 9 4 000000000000 4 6 7 1 0000 0000000 00 00 222222 0000 88 88888 2 55 888888888888 0 0 00 2 0 0 0 0 999999999 2 99 0 5 2 0 9 6 11 4 4444 4 9 888 1 11 0 8 222 1 9999 4444 6 444 0 0 0 2222222 99 99 0 99999999999999 4 77777 000000000000000000000000000000000000000000000000000000000000000000000000000 0 33 000 7 4 4 99999 888 99 0 4 000 9 4 2 111111 0 4 2 000 6 0 0 555555 00000000000000 777777777777777777777 99 6 7777 11111 3 6 6 4 0 00000000 3 666 3 888 8
consensus : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-AACAAAAGGAANTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-N-TGTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCT-----AAANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
Reference ( family-1457 ) : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-GACAAAAGGAAGTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-N-TGTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCT-----AAANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
gi|1 : GGTTGTTCCGTAAATAATGCGAC---TGCTGTATTCTTTCTTGCAAATCATGCCATATA----TA-AATAAAAAAACATTGTATCGCTAGAGTA---ATC-GCTGGT--------------T-AAG-A-T-CTGACTCAATCATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAA--------------C---GT--------------AT--------------------GCA--A-----------ATTGACTGGCCAACGAGCTGAAAATGTGCTTGAAATTATGGCC--TA-TATTCGATGTAGGTCATTACTTGAGTTGAAATCGAAAGGCATTTACTGAGAGGTGTGTAATATTTACGGGGAAGGTCA-----GATAGTATATATAATTATTTGTTGTTGGGTAGTCAGATTTCAATCTGGACAACAGCAGCTGAAA--ATGCAGCTCGCCCTGG-CGTACTCTAAC--GCCA--AC---A-ATCACAGAAAACAT--AAAAC-AATCCTCGAAATTACGAAAG------C-------T-GATGC----------------TGAGAGATTT--AGCTCCGATGACAACAT-TG-TTGTAAGCATGAAATCATCT-AAT---T----T--TAAAAAAGGTTTTAAAAGTTTTGAAAATAAATGAACGAT----GGATATCGCA-------TTTG--TTG--ACGAGGACAAAAAGAAGTCATTTTTGAAA-ACTTGGGTTGGTTATTATGA---------GATAAAA-A-GA--AAAGCATACAAC-ATAAATTGGG---------CCACGGAAAATGCGAGACG--CCCATATATAGTAAAA-TGACTGCGATCTGCTAAGAAGGTTCTGTGTGCACTACCTTTTGCT--AGCCAAG-GTCCTGCAGCCGTACAGACA-GCGGTGCCA---AAGGGCAAAACTGCCACAGGACGG-TTT-TATACAAAC--GTAACTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAATACATGTAAATCTGAAGTATGTTTGTCTTTTACATGACATTGCAACAGCTCAAAATT---CTCGTGTTGTGAC-ATCCAT-TATGCAGTCAAAGAAAGTCGCCGTT-------CTCC--CTC--AC-CC----C-T-------CTATACTAG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTTCCAAGACTGAAAG---AAACATTTGTCTGGGAAGAG----ATAT---AAGT--CG-ACA-A-TATCCT-AGGATCTGCAC-AT-T-ACCTGTGTCTCAAGGGTATATCTGTTC-AAGAGTACG-A-C--A-T-TATTTT--------------CAAAATT-G-------CG--C---G--ATTGAAAAC-GTGTGCTTT---AGAT-----AAACGGGAGTAT-TTTGAAGGAC-ATCGCATAA-------GAAAT-TAATCA-A-AAATGATTT---TAATACTCTAATAACAATA
gi|10 : CAGTGTCACCCTTTAA--CAGG----TCTGAAATATGTCTGTCTTTTGCATGACAACGTGCCAGCACACAAAG---CCTGTATTGTGGA-TAACTT-TTTGCAATC---------------T-------CTCC--CAC--AC-ACACAAC-C-------CAA-ACTAG---CTAGAT----------T-----TGGCCCTCTTTGACTATTT----------------T------CTC--------------TTCCAAAAACTAAAAA---A---GCTTGTCTGGAAAGAT----ATAT---AACTTCCG-A-A-A-TGCC----------------------------CTTAAGGGTAT---TGCTC-AAGAATATGAA-A--A-T-TGTTTT--------------CAAAATTGG-A--C--TG--C----------AAGGC-ATGTGTTTTTTCATCTATAACAAACAGGAGTAT-TTTGAAAGAA-ATCAGAAAA-------ACAAT-TTAT-C-ATAAATGGTAA---AAGTATTCTAGTACCAATAtaa
gi|11 : --------------------GCA--A-----------AATATCTGGCATACAAGCAGAAAATTTACTTGAAAATAAAGCC--TT-TATTCCAGGTAGGTCATTACTTcccatcccattacatatggaacac
gi|11 : aTCA-----AATTTTGTTAAGTACTATTTGTAGGTGAATGGCCAAATTTCAATCCTGGCAAAAGCAGCTGAAAT-ATGCTTCTCACCCTGGTCATCCTGCAAT--GTCA--AC---A-ACCAAAGTGAACAT--AAAAA-AATCTGTGAAGTCCTGAAAA------C-------T-AATGC----------------T-AGATACT-----------TGACAA-ACATT-TCGTTAGCATGAGTTTATCT-AAT---T----T--GAAAAAA-CTTCTAAATGTTAAGAAAATATATTCCTGAT----GGGCAACACATTAAAATTTTG--TTG--AC-A-G---AAGGGTATTCCTTTTCCAAAcaaattttgttaagtactatttgtaggtgaatggccaaatttcaatcctggcaaaagcagctgaaatatgcttctcaccctggtcatcctgcaatgtcaacaaccaaagtgaacataaaaaaatctgtgaagtcctgaaaactaatgctagatacttgacaaacatttcgttagcatgagtttatctaatttgaaaaaacttctaaatgttaagaaaatatattcctgatgggcaacacattaaaattttgttgacagaagggtattccttttccaaaa
gi|12 : agcaaaatatctggcatacaagcagaaaatttacttgaaaataaagcctttattccaggtaggtcattactAATTAGTGCG--TA-TATTCGAGGTAGGTCATTACTAGCGTTGAAGTTAATAGA--TTTACCTAAAGGTGTGTGCCATTTACAGGGAGGATCA-----AATGGCGTGTAGTGTTATTTGTAGGTGTGTAGTCATATTTCTATTTGTGCAACAACAGTTGAGAG-ATTCTACTGGCGCTGGTGGTCCTGTAAC--GTTA--AC---A-ACCACAGAGAAC-----------ATCCGCATTATCCTGAAAA------CCAATGCTT-GATAC--------AT----CATACGACACTT--AGCTCAGGTGACAA-CC-TT---GTAAGCAAGAGTT----------------------------CATCTAAAGGTTAAGATAATAAATGCa
gi|13 : acACTGTT-------CTCT--CTC--AC-CC----CAT-------CCATACTAG---CCAGATTTGGCCCATTG-----TG----------------T----------------TTTTTTACTC--------------TTCCCAAGAC---AAA---AAGTACTTGTCCGG-AAGGG----ATAT---AACT--CG-AGAGA-TGCCGT-GTGATCTGC-T-ATAT-ACCAGTGTCTTAAGGAAATTACTGTTC-AAGAATACG-A-A--AGA-TGTTTT--------------CAAAATTGG-A--TTGCG--T---G--GTTTAAAAC-GTTTGTTTT---AGCC-----AA-----------TCTGAAGGAA-ATTGAAAAA-------TAAAT-TGATAA-A-AAATTATTG---TAATATTCTAGTAACAATA
gi|13 : GCGTTCCATAAATAATACGAT---TG--GTATTGTTACTAGAATAT--TACAATAccaatcgtattatttatggaacgcttct
gi|14 : actgttctctctcaccccatccatactagccagatttggcccattgtgtttttttactcttcccaagacaaaaagtacttgtccggaagggatataactcgagagatgccgtgtgatctgctatataccagtgtcttaaggaaattactgttcaagaatacgaaagatgttttcaaaattggattgcgtggtttaaaacgtttgttttagccaatctgaaggaaattgaaaaataaattgataaaaaatTAGG---------CCACGGAAAATGTGAGACG--CGCATGTATTGCCAAA-CGATAACGATCTGTGTAGCAGGTTCTGTATGCAATAGTTTTCATT--AGCAACG-GTCCT---GCTGTACAGACA-GTGGTGCCA---AAGTGCAGAACTGTCACAGGACGGTTTT-TATAAAAAC--GTAATTT--AAATAATTGAAGAAGTACTACAAACAGCGTCGTCCTAT-A-ACAGG----TCTGAAGTATGTTTGTCTTTTGCATGACAATGCGCCAGCCCACAATA---CCCGTATTGTGACTTGATAT-TTTACAGTCAGAGAAGGTCACCGTttct
gi|15 : CTTGAAATTTGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGATATTGAA-GTCATATACCAAG--GAGTGTGACATTTATGGGGAGGGTCA-----AATGTCGTATAGTAATATTTGTAGGTGGGTGGCAAATTTTTAATCCAGGCAACAGTACTTGAAAC-ATACTGCTTGCCCTGGTCATCCTGTAACCTGT-A--A----G-ACCAAAGA--------AAAAA-AATCTCTGAAAT-CTGAAAA--------------T-GATAC--------AT----AGTAAGAGTGTTAAAGCTTGGATAACAA-AC--------TAG-------TCATCA-AAT---T----T--TGAAAAAGCATTTAAA
gi|16 : TTCCGTTAATAATGCGAC---TTTTGTATTATTTCTCGGAAAT------ATATG----TA---TGAAACATTTTCGTGGCGTTGGTGCGTAGGCCTACTGAAACACACT-G---G-T-ACATA-T-CTGCCTCAAATATTCACTGCCCTTGGTGTAATGTACATTGTTTGA-----------TAG--------------T---GT--------------ATTCATACCACTGTAATACTATGCA--A-----------AATGACTGGCAAACGAGC-GAAAAT-TGCTTGAAACTACGGCC--TA-TGGTCGAGGTAGGTCA------AGG-TGAAGTCGAAATACATTTACCGATAGTAGTGTGACATCTct
gi|17 : tggaCT-AAGATCGGC-T-ATGT-ACCAGTGTCTTAAGGGTACTTTTGTTC-AAGAATACG-A-A--A-AATGTTTTTCAATATTTATTTGCAAAATT-GGA--TAGCG--C---G--ATTATAAAC-TTGTGTTTC---ACAT-----ATAAGAGAGTAT-CTAGAAGGAA-GT--AAAAA-------AAAATATGGT-ATA-AAATAAATA---TAGTACTCTAGCAATAATA
gi|17 : GGTGTTCCGCAAAGAAAGCGAC---TAT--TATTATTGCTatagtcgctttctttgcggaacacc
gi|18 : ctaagatcggctatgtaccagtgtcttaagggtacttttgttcaagaatacgaaaaatgtttttcaatatttatttgcaaaattggatagcgcgattataaacttgtgtttcacatataagagagtatctagaaggaagtaaaaaaaaatatggtataaaataaatatagtactctTATTTTATAAATAATGCCAC---TGGTGTATTATTTCTTTGAAATCTC---------------------ATAACTTTGTATCGCTAGAAAG---ATC-ACTGGTGCAAGTC-GCTGGTT-AAA-A-T-CTG--TTAAATATTCACTGACCTTGGTGCAATGTACATAGCTTTG-----------TAG--------------T---TT--------------AT--------------------TCATTACACTGTATGGTAATTACTGGCAAACAAGCTGAAAATGTGCTT
gi|19 : aaCTGTTC-ACGAATACG-A-A--A-TATGTTTTG-------------CAAAATT-GCA--T--TG--C---GCTGTTAAAAAA-GTCTGTTTT---AGTT-----AAATGGGATGAT-TTTGAAAAAATATCGAAAAAAATCGCTAAAAT-TGAT---A-TAATGATTATTGTAGTAGTCTGGTAATAATA
gi|19 : GGTGTTTCGTAAATAATGCGAT---TG--GTATTATTccaatcgcattatttacgaaacacc
gi|2 : ctgttcacgaatacgaaatatgttttgcaaaattgcattgcgctgttaaaaaagtctgttttagttaaatgggatgattttgaaaaaatatcgaaaaaaatcgctaaaattgatataatgattattgtagtagtctggtTATTTCGTTGAAATCGTGCAATATA----TA-GATCAGACAATTTGGTATCACTAGCTTG---ATC-ACTGGTGCGTGTTAGA-GC-T-AAA-A-AACTGCCTCAAACCATCGCTGATCTTGGTGCAATATACTTTGCTTGAAATTGTATTCATAG--------------CACTGT--------------AT--------------------GCA--A-----------AACGACTGGCAAACGAGCTAAGAATGTGCTTGAAACTAGAGCC--TA-TATTCGAGGAAGGTCATTACTTGGATTGAAGTTAAAAGATTTTTACCGAAAGGTGTGTGGCATTTATGGGAAGGGTCA-----GTTGTCGTAAAGTACTATTTGTATGTGGATTACCAAATATCTATCCGGGCAACAG-----AAAAGCGTGTTGCTCACCCTGGTCGCCCTGTAAC--CAGA--GC---ATATCGAATAA---AT----AAA-AATT------ATCCTGAAAAATAGTGC-------TCGATAT--------AC----AGTAAGAGATTT--AACTCGGATGACAA-AC-TTGTCGTTAGCACAAATACATCT-AGT---T----T--TGAACAAGCATTTCAAAATTAAGAAAA-AAA-GCACGAT----GGATACCACA-------TTTG--TTG--AC-A-AACAAAATAAA----------AAAAAG--GGTT--GCTATGGCGAAAACGATTTG-GAAAATA-AATCAAAACCTCTTTTGAGAATATAGGTAGGAGTGATCTCGGAAAAT-CGATACG--CCCATGTTTTTCCAAA-TGTGTGTAATATGTTAAGAAGTTTATACTTGCAATATTTTCC-CT--AGTAACA-GTCCT---GCTGTTCAGACA-A-AGTGCCA---AATGGCAGAACTGTCACAGGACGG-TTTATAT----AC--GTAACTTTGAAACAATTGAAGAAGTACTACAAAAAGCGTTGCCCTAT-A-TCAGG----GCTGAAGTATGTTCGTCTTTTCCATAACTACGTGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACTT-TTTGTAG
gi|2 : AA---AAACACTTGTCTAGGAAAAT----GTAC---AACC--CG-AGA-AATGCCCT-GAGATCTGC-G-TT-T-ACCCTTGTTTTGAGGGTATACCTTTTC-AAGAATACGAA-A--A-A-TGTTTT--------------CATAATTAG-A--T--TG--CACTG--TTTTAAAAT-GTGTGTTTT---AGCT-----ATAT-TAAGTAT-TTTGAAGGAA-AT-AACAAA-------GAAAT-TG-----A-ATATAATTA---TAGTATTCTAGTAGCAATAactaaaaacacttgtctaggaaaatgtacaacccgagaaatgccctgagatctgcgtttacccttgttttgagggtataccttttcaagaatacgaaaaatgttttcataattagattgcactgttttaaaatgtgtgttttagctatattaagtattttgaaggaaataacaaagaaattgaatataattatagtattctagtagcaataccaattgcattattaacataacacccc
gi|20 : tatttcgttgaaatcgtgcaatatatagatcagacaatttggtatcactagcttgatcactggtgcgtgttagagctaaaaaactgcctcaaaccatcgctgatcttggtgcaatatactttgcttgaaattgtattcatagcactgtatgcaaaacgactggcaaacgagctaagaatgtgcttgaaactagagcctatattcgaggaaggtcattacttggattgaagttaaaagatttttaccgaaaggtgtgtggcatttatgggaagggtcagttgtcgtaaagtactatttgtatgtggattaccaaatatctatccgggcaacagaaaagcgtgttgctcaccctggtcgccctgtaaccagagcatatcgaataaataaaaattatcctgaaaaatagtgctcgatatacagtaagagatttaactcggatgacaaacttgtcgttagcacaaatacatctagttttgaacaagcatttcaaaattaagaaaaaaagcacgatggataccacatttgttgacaaacaaaataaaaaaaagggttgctatggcgaaaacgatttggaaaataaatcaaaacctcttttgagaatataggtaggagtgatctcggaaaatcgatacgcccatgtttttccaaatgtgtgtaatatgttaagaagtttatacttgcaatattttccctagtaacagtcctgctgttcagacaaagtgccaaatggcagaactgtcacaggacggtttatatacgtaactttgaaacaattgaagaagtactacaaaaagcgttgccctatatcagggctgaagtatgttcgtcttttccataactacgtgccagcccacaaagcccgtattgtgactgactttttgtagactAAA-A-GA--ATAGCATCGAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACA--CCCATGTATTGCCAAA-TGATTGCGATCTGTTAAGAA-GTTATGTATACccaattgcattattaacataacacccc
gi|21 : aaaatatatgggaaaacattgtttcaatttttaatactttttgccatagttttaaaatatggattttTC-TAGAATGCG-A-ATAA-C-AATTCT----------------AAATT-G-AATTG-CG--C---A--CTTGCAAAC-ATGTGTTT----AACT-----AAAAGGGAGACT-TTTGAAGGAA-ATCCAATAG-------GAAAT-TGAT-A-G-AAATGGTTA---TTGTACTCTAGCAACAATA
gi|21 : TGTTACGTAAGTAATGCGAT---TG--GTATTGTTGC-TAGA----GTACAATAccaatcgcattacttacgtaacaggaac
gi|22 : tctagaatgcgaataacaattctaaattgaattgcgcacttgcaaacatgtgtttaactaaaagggagacttttgaaggaaatccaataggaaattgatagaaatggtTGTTTTGAAGGAG----ATAA---AACT--AG-AGA-AATGCTCG-GGAATGTGA-T-AT-TTACAAGTGTCTTAAGGATATACCTTTTCAAAAAATACG-G-AT-A-T-TGTTTT--------------CAAAATT-------------------------------TG---------AGCC-----AAAGGAGAATAT-TCTGACGGAA-CTTGCAAAA-------CAAAT-TGAT-ggaac
gi|23 : TTT--------------CAAAATT-G-AATTG-TG--C---A--GTTATAAAC-ATTTGTTTC---AGCT-----AAAGGGGAGTAC-TATGAAAGA-----GTG----------------TGTC-C-A-CAATTATTA---TAGTATTCTAGTAACAA
gi|24 : ttccttttccaaaaaaaTTTAAC---AGCAGCG-GTCCTG---CCGTACAGATA-GTGGTGCCATTTGAAGGCAGAACTGTCGCAGAAAAG-TTT-TATAAAAAC--GTAATTTTGAAACCACTAAACAAGTA-TATAA----CG------TGTAA-A------------AAGTAGGTTCGTCCTTTGCAatccaatcacagtttttatggaacacccctc
gi|25 : c--AGCAATG-GTCCTGT-G--GTACAGACA-GTGGTGCCA---AAGGGCAGAATTGT-ACAGGACAG-TTT-TATAAAAAAAAGAAATTTTAAAACAATTGAAGAAGTACTGCATACAGCATCGCCCTAT-A-ACAG
gi|26 : TATGTTCGCATTTTGCATGACAACTTGCCAGTCCACAAAA---CCAATATTGTGAC-CGACGT-TTTGCAGTCAGAGAAGGTCGCCGTT-------CTCG--CTC--TG-CC----C---------CAATACTT----CCA
gi|27 : GAAGTATGTTTGTCTTTTGCATGACAACACATCATCCCACAAAG---TCCATATTGTGAC-CGACTT-TTTGCAGTCAATGAAGATCACTTTT-------CTCC--GTC--AA-CC----C-T-------C-ATACTag
gi|28 : GCAACGTACATTGTCTTA-----------TAA--------------C---GTGCTTGTTACTCTGTAT--------------------ACA--T-----------AATGACTGGAAAAC--------ATTGTGCTGTAAATTAGGACCTATA-TATTACAGGTAGACTGTTAATTG
gi|29 : G-ATGCTGCTCACACTG-TCGTTTTGTATC--ATCA--AC---A-ACCAAAGAAAACAG--AAAAA-AA-CTGCCAAATCTTGAAAA------C-------
gi|3 : TGGG---------TCAAGGAAAATATTAGAAA--TCCATGGATTGCCAAA-CGATTGCAATCTGTAAAGAGGGTTATGTATGCAATATTTTT-ACT--AGCAATA-GTCCTG---CCGTACAGATA-GCGGTGCTA---AAGGACAAAACTGTTACACGACGG-TAT-TTTAAAAAA--GTAATTTTGAAACAACTGAAAAAGTACTACAAACAGCGTCGCCCTAT-A-ACAGG----TCTGGAGTATGTTCGTCTTTTGCATGACAACACACCATCCCATTAAG---CCTGTATTGTGAT-TGACAT-TTTGCAGTCAAAGAACTTCATCGTTCCACTCACTCCCGCTCCTAC-CCA---C-TCTACTCGCAATACTTGGGCCCGTAT----------GCCTATTT----------------T----------------T------ATT--------------TTCCAAAAACT-AAAA---ATACATATGTCAGGGACGAAACATATAT---AACT--CG-AGACA-TGCCCT-GGAATCTGC-T-CTGT-ATCAGCGTCTTAAGAGTTTACTTGTTT-AAGAATACG-ACA--A-A-CGTTTT--------------CAAAACT-GAA--TTACG--T---G--GTTAAAAGC-GTGTGGTTT---AGAT-----AAAAGGGAGTAT-TTTGGAGGAA-ATTGCAAGA-------TAAAT-TTAT-A-A-AAATG-TTA---
gi|30 : ccCGCAAAA-------GATAT-TGAT-A-A-AAATGAGTA---TAGTTTTCCAGTAACAATAatcaagggagataatagtagtgtgattcctgaaagtcagtgat
gi|30 : TGTTCGGTGAATAATGCGAT---TG--ATATTGTTAC-TGGAAAtcaatcgcattattcaccgaacatacct
gi|31 : cgcaaaagatattgataaaaatgagtatagtGACACC-CGCCAATCCATAAAC---CCCTCATTTTGAC-TGACATGTTTGTTGTCAGAGAAGGTCACtacct
gi|32 : -A-A-AAATGATTA---TAG---TCTAGTCACAATA
gi|33 : GGGTGCTCCATAAATAAGGCGACGACTGCTGTATTATTTCTTGGAAATCATccgatcccattatttacgtaacacccctcgta
gi|34 : ATTATTTCTTGCAA-TCATGCAATGTA----TA-AATAAAACAACTTGGTATa
gi|35 : AAGTATGTTCGT--TTTACATGACAACGCACCAGCCCACAAAG---a
gi|4 : aTAGTGGC--TA-TATTCGAGGTAGGTTATTACATGGGTTGAAA-------ACATTAACCGAGAGGTGTGTGGCGTTTACGGGGAGG--CATAAAAGATG--GTATTGTACTACTTGAAG-----------------AA---GGG-------AGTTGAAAG-ATGCTGCTCGACCAGGTCGTCCGATAAC--GTCA--AC---A-ACCAAAGAAAACATC-AAAAC-AATCCGTGAAAGCCTGAAAA------C-------T-GATGCTCG-----AAACACAGTAAGAGACTT--AGCTCGGATGACAA-AC-TTGTCGTTAACACGTGTTCGTCT-AAT---T----TAAAAAAAAAACATCTAAAAGTT------ATAAATGCATGAT----GAATACCGCA-------TTTG--TTGACACGA-ACCAAAAGa
gi|4 : GTGA---------G-CCAAA-ATGA--AAAGCATCTAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACG--CGCATGTATTCCCAAA-CTATTGCGATATGTTAAAAAAGTTCTGTATGCATTGTTTTT-ACT--TGCAACG-GTCCT---GCTATACAGACAGGCGGTGCCA---AATTGGAGAACTGTCATAGGACGT-TTT-TAcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|5 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaagGGATGTTCTGTAAATAATGCGAT---CGCCATATTATTTCGTGGTAACCGTGCAACATAATATTATAATGATACAACTTGGTACCGCTAGAGTG---ACT-ATTGGTACGTGTC-ACAGG-T-AAA-AAT-CTGCCTCAAACATTCACTGACCTTGGTGCAAAGTTCATTGCTTGA-----------TAG--------------C---GT--------------ATTCCTT---------------ACA--ATGTATGAT---AATGACTTGCAATCGAGCTGCAAATGTGTTTGAAATTAGGGCC--TA-TATTCGAGGTAGGT------------TGATGTCGAAAGCCATTTACCAAGA--TGTGAGACATTTACGGGGAGGGTCA-----GATGTCATATATTACTATTTGTAGGCGGGCGGCCAAATTGTAATCCGAGCAACAGCAGTTGAAAG-ATGCTGCTCGGCCTGGTCGTCTTGTAAC--ATCACTACCAAA-GCCAAAGAAAACGTAGAAAAA-AATCCATGACAACCTGAAAA------C-------T-GAAGCA-------A-----AACAAGAGATTT--AGCTCGGATAACAA-AC-TTATCGTTAACGCGAATTCATCTAAATATAT----T--TAAAAA
gi|6 : TGTAAC--GTCA--AC---A-ACCAAAGAACACAT--TGAAATAATCCGCGAAATCTTAAAAT------T-------T-GATGT--------A-----AG--AGAGGC----AGCTCGGATG--------------CTAGCACGAATTCATAT-AAT---TCAAGT--TAGAATAGCATTTAAATGTTAAGAAAATAAATGCACGATTCACGAAGTCAAGG-------GTTGCTTTG--GCGA-AA-AAAAGAAAAT-GTTTTCGAAATAC--AGCCAAACTATTGCGA---------tga
gi|6 : aAGACAT--GGCTCCATTATTATGA---------G-TAAAA-A-AA--AAA-CTTCTACC-AGAATTTGGG---------ACGCAGAAAATGCGAAACA--CCCATGTATTGCCAAA-CGATTGTGACCAGTTTAGAAAGTTATGTATGCAATGTTTTTCACT--AGCAACG-GTCAT---GTCGTACAGACA-GCGATGCCA---AATGGCAGAACTATCACAGAGCGA-TTT-TAT-AAAAC--ATAATTCTAAAAGAATTAAAGAAGTACTACAAACAGCGTCGCCCTAT---ACAGG----GC-------TGTTCGTCTTTTGCATAACAACACaagtagtacgagttataagacatggctccattattatgagtaaaaaaaaaacttctaccagaatttgggacgcagaaaatgcgaaacacccatgtattgccaaacgattgtgaccagtttagaaagttatgtatgcaatgtttttcactagcaacggtcatgtcgtacagacagcgatgccaaatggcagaactatcacagagcgattttataaaacataattctaaaagaattaaagaagtactacaaacagcgtcgccctatacagggctgttcgtcttttgcataacaacacaa
gi|7 : atgtaacgtcaacaaccaaagaacacattgaaataatccgcgaaatcttaaaatttgatgtaagagaggcagctcggatgctagcacgaattcatataattcaagttagaatagcatttaaatgttaagaaaataaatgcacgattcacgaagtcaagggttgctttggcgaaaaaaagaaaatgttttcgaaatacagccaaactattgcgaaagtagtacgagttataCCATATATAATACGAC---TGCTGTATTATTTCTTGGAATTCATGCAATATA----TA-ATTGAAACAACCTTATATCCCTAAATTG---ATC-ACTGGTGCATGTC-GCAGG-TAAAA-A-T-CAGCCTTAAATATTCATTGATCTTGGTGCAATGCACATTGCTTTA-----------AAGTGTATTCATTACACT---GT--------------AT--------------------GCA--A-----------AATGACTTGCAAACAAACTGAAAATCTGCTTGAAATTATGCCCGATATTATTCAAGGTAGGTCATTACTTGAGTTGAAGTTGAAaa
gi|7 : ATAGCAC-ATTTGTAGATGGGTGAACTGATTTTGATTTGGGTAACAATAGTTGAAAG-ATGCTGCTCGCACTGGTC---CTGTAAC--ATCA--AC---A-ACCAAAGAAAACATT-GAAAA-AATCTGTGAAATTCTGAAAA------C-------T-GATGCTTGATATGA-----AGTAGAAGACTT-------GGATG-----------TTGTTACCACCAGTT----T-AGT---T--------------GCATCTAAAAGTTAAGAAGACAAATGCAtttttttttttctgcaaggtaaatagcacatttgtagatgggtgaactgattttgatttgggtaacaatagttgaaagatgctgctcgcactggtcctgtaacatcaacaaccaaagaaaacattgaaaaaatctgtgaaattctgaaaactgatgcttgatatgaagtagaagacttggatgttgttaccaccagtttagttgcatctaaaagttaagaagacaaatgca
gi|8 : ccatatataatacgactgctgtattatttcttggaattcatgcaatatataattgaaacaaccttatatccctaaattgatcactggtgcatgtcgcaggtaaaaatcagccttaaatattcattgatcttggtgcaatgcacattgctttaaagtgtattcattacactgtatgcaaaatgacttgcaaacaaactgaaaatctgcttgaaattatgcccgatattattcaaggtaggtcattacttgagttgaagttgaatttttttttttctgcaaggtaaCATGAAAAATG--AGACCATCCCATGTATTGCCAAAATGAATGTGAT-TGTTAAGAAGGTTCTGTATGCATTTTCTTTCACTTAGGTAACATGTCCTG---TCATACAGATG-GCAATCACA---AAGGGCTAAACAATCACCGGACA--TTT-TATTAAAAT--GTCATATTGAAATAATTGATGAAGCACTACAAACAGCATAGTCTTGTTG-G-AGT----TCTGAATTATATTCATTTGTTGCATGACAATGCGCCAGCCAACA--G---TCCTTATTGTGCC-TGACCT-CTTACAGTTAGAGAAGGTCACCATT-------CTCC--TCC--ACACC----C-C-------CAATACTCA---CCAGAC----------A-----TG----------------TCCCCCTGTAATAATTAT------CTC--------------TTCCTAAAACAAAAAAAAGAAACACTTTTCTGTGAAGAA----ATAT---AACT--TGCAAA-A-TGACATAGGAATCTGA-TAAT-T-A-CAGTGT-TTAAGGGTACATATGTTG-AAAAATA
gi|9 : GCAAAATAGTCACAGAACG--TTT-TATAAA-----------------TAACTGAA------------ACAGCGTCGCC-TGTAA--CAGG----TCTGAAGTGTGATCGTCATTTGCATGACAACATGCCAG-CCAAAAAGAAACCCATAGT-TCAC-TTATAT-TTTGCAGTCGGAGAAGGTCACTGTT-------CACG--CTCA-AC-GC----C-----------ATACTCA---CGAGAC----------A-----TG----------------C----------------C------CTCTGTGACTATTATTTTTCCCAAATCT-AAAA---AAACAATTGCCT--TAAG-G----ATATGCAAAC---AG-AAA-A-TGTCTT-
gi|9 : gcTGCCTTAAGGATATGC---------AAACA-G-A-A--A-A-TGTCTT--------------CAATATT-GGA--T--TGTGC---G--GTTAAAAAAAGTATGTTAT---AGCT-----AAAGGGGAATTTATTTG-AGGAA-TTCGCCAAA-------C-AAT-TGAT-C-A-AAATAATTA---CAGTACTCGAGTAACAATAcaatattggattgtgcggttaaaaaaagtatgttatagctaaaggggaatttatttgaggaattcgccaaacaattgatcaaaataattacagtactcgagtaacaatacgaattgcattatttagggaacatccc
gi|9 : gcgcaaaatagtcacagaacgttttataaataactgaaacagcgtcgcctgtaacaggtctgaagtgtgatcgtcatttgcatgacaacatgccagccaaaaagaaacccatagttcacttatattttgcagtcggagaaggtcactgttcacgctcaacgccatactcacgagacatgccctctgtgactattatttttcccaaatctaaaaaaacaatGGATGTTCCCTAAATAATGCAAT---T--CGTATTGTTACTCGcgaattgcattatttagggaacatccc
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22 1111 111 111 333333333333 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 11111 111 22222222222222 55555555555555 222222222 111111111111 1111 2222222 11 1111111 111111 11111 22 333333333333 11 222222222 2222 2222 1111111 11 33333333333333 11111 444444444444444444444444444444444444444444444444444444444444444444444444444 11 111 11111 111 111111 111111 22222222222222 555555555555555555555 11111111 111
lowQualScore : 555 22 0 2 66 1 2222 000 1 0 1 1 111 6 3 555555555555 6 6 888 2 0 0 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 3 2 11 4 0 0 1 1 0 0 1 44444 4 1 0 0 1 3 55 55 55 777 4 0 555 4 1 0 11111111111111 4 44444444444444 0 66 1 555555555 2 4 888888888888 1 0 1 0 7777 6666666 11 8888888 1 777777 22 55555 0 11 222222222222 8 8 11 3 1 1 8 1 222222222 0 66 5 2 0 1 1 7 66 4 9999 4 0 777 0 88 4 4 666 0 1111 9999 1 666 4 1 4 6666666 66 11 5 33333333333333 6 22222 222222222222222222222222222222222222222222222222222222222222222222222222222 1 77 000 0 1 3 00000 888 66 5 3 111 444 888888 5 1 0 0 888 3 4 4 333333 4 55555555555555 111111111111111111111 22 3 6666 99999 2 3 3 4 1 33333333 3 222 3 555 1
lowQualScore : ... .. . . .. . .... ... . . . . ... . . ............ . . ... . . . ....................................................................................... . . . .. . . . . . . . . ..... . . . . . . .. .. .. ... . . ... . . . .............. . .............. . .. . ......... . . ............ . . . . .... ....... .. ....... . ...... .. ..... . .. ............ . . .. . . . . . ......... . .. . . . . . . .. . .... . . ... . .. . . ... . .... .... . ... . . . ....... .. .. . .............. . ..... ........................................................................... . .. ... . . . ..... ... .. . . ... ... ...... . . . . ... . . . ...... . .............. ..................... .. . .... ..... . . . . . ........ . ... . ... .
lowQualScore : 888 77 7 2 44 9 1111 999 7 3 0 0 777 7 7 888888888888 7 7 777 5 7 7 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 4 5 00 0 2 1 1 4 3 7 0 33333 9 4 2 2 0 4 66 55 55 000 0 7 999 0 4 5 11111111111111 4 77777777777777 8 11 9 777777777 9 4 000000000000 4 6 7 1 0000 0000000 00 6666666 4 888888 88 88888 2 55 888888888888 0 0 00 2 0 0 0 0 999999999 2 99 0 5 2 0 9 6 11 4 4444 4 9 888 1 11 0 8 222 1 9999 4444 6 444 0 0 0 2222222 99 99 0 99999999999999 4 77777 000000000000000000000000000000000000000000000000000000000000000000000000000 0 33 000 1 4 4 99999 888 99 0 4 000 999 111111 0 4 2 1 000 6 0 0 555555 0 00000000000000 777777777777777777777 99 6 7777 11111 3 6 6 4 0 00000000 3 666 3 888 8
consensus : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-AACAAAAGGA-ANTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-A-T-GTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
Reference ( family-1457 ) : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-AACAAAAGGA-ANTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A--A-N-T-GTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
gi|1 : GGTTGTTCCGTAAATAATGCGAC---TGCTGTATTCTTTCTTGCAAATCATGCCATATA----TA-AATAAAAAAACATTGTATCGCTAGAGTA---ATC-GCTGGT--------------T-AAG-A-T-CTGACTCAATCATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAA--------------C---GT--------------AT--------------------GCA--A-----------ATTGACTGGCCAACGAGCTGAAAATGTGCTTGAAATTATGGCC--TA-TATTCGATGTAGGTCATTACTTGAGTTGAAATCGAAAGGCATTTACTGAGAGGTGTGTAATATTTACGGGGAAGGTCA-----GATAGTATATATAATTATTTGTTGTTGGGTAGTCAGATTTCAATCTGGACAACAGCAGCTGAAA--ATGCAGCTCGCCCTGG-CGTACTCTAAC--GCCA--AC---A-ATCACAGAAAACAT--AAAAC-AATCCTCGAAATTACGAAAG------C-------T-GATGC----------------TGAGAGATTT--AGCTCCGATGACAACAT-TG-TTGTAAGCATGAAATCATCT-AAT---T----T--TAAAAAAGGTTTTAAAAGTTTTGAAAATAAATGAACGAT----GGATATCGCA-------TTTG--TTG--ACGAGGACAAAAAGA-AGTCATTTTTGAAA-ACTTGGGTTGGTTATTATGA---------GATAAAA-A-GA--AAAGCATACAAC-ATAAATTGGG---------CCACGGAAAATGCGAGACG--CCCATATATAGTAAAA-TGACTGCGATCTGCTAAGAAGGTTCTGTGTGCACTACCTTTTGCT--AGCCAAG-GTCCTGCAGCCGTACAGACA-GCGGTGCCA---AAGGGCAAAACTGCCACAGGACGG-TTT-TATACAAAC--GTAACTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAATACATGTAAATCTGAAGTATGTTTGTCTTTTACATGACATTGCAACAGCTCAAAATT---CTCGTGTTGTGAC-ATCCAT-TATGCAGTCAAAGAAAGTCGCCGTT-------CTCC--CTC--AC-CC----C-T-------CTATACTAG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTTCCAAGACTGAAAG---AAACATTTGTCTGGGAAGAG----ATAT---AAGT--CG-ACA-A-TATCCT-AGGATCTGCAC-AT-T-ACCTGTGTCTCAAGGGTATATCTGTTC-AAGAGTACG-A-C--A-T-T-ATTTT--------------CAAAATT-G-------CG--C---G--ATTGAAAAC-GTGTGCTTT---AGATA-----AACGGGAGTAT-TTTGAAGGAC-ATCGCATAA-------GAAAT-TAATCA-A-AAATGATTT---TAATACTCTAATAACAATA
gi|10 : CAGTGTCACCCTTTAA--CAGG----TCTGAAATATGTCTGTCTTTTGCATGACAACGTGCCAGCACACAAAG---CCTGTATTGTGGA-TAACTT-TTTGCAATC---------------T-------CTCC--CAC--AC-ACACAAC-C-------CAA-ACTAG---CTAGAT----------T-----TGGCCCTCTTTGACTATTT----------------T------CTC--------------TTCCAAAAACTAAAAA---AG---CTTGTCTGGAAAGAT----ATAT---AACTTCCG-A-A-A-TGCCCT----------------------------TAAGGGTAT---TGCTC-AAGAATATG-A-A--A-A-TTGTTTT--------------CAAAATT-GGA--C--TG--C----------AAGGC-ATGTGTTTTTTCATCTATAACAAACAGGAGTAT-TTTGAAAGAA-ATCAGAAAA-------ACAAT-TTAT-C-ATAAATGGTAA---AAGTATTCTAGTACCAATAtaa
gi|11 : --------------------GCA--A-----------AATATCTGGCATACAAGCAGAAAATTTACTTGAAAATAAAGCC--TT-TATTCCAGGTAGGTCATTACTTcccatcccattacatatggaacac
gi|11 : aTCA-----AATTTTGTTAAGTACTATTTGTAGGTGAATGGCCAAATTTCAATCCTGGCAAAAGCAGCTGAAAT-ATGCTTCTCACCCTGGTCATCCTGCAAT--GTCA--AC---A-ACCAAAGTGAACAT--AAAAA-AATCTGTGAAGTCCTGAAAA------C-------T-AATGC----------------T-AGATACT-----------TGACAA-ACATT-TCGTTAGCATGAGTTTATCT-AAT---T----T--GAAAAAA-CTTCTAAATGTTAAGAAAATATATTCCTGAT----GGGCAACACATTAAAATTTTG--TTG--------ACAGAAGGGTATTCCTTTTCCAAAcaaattttgttaagtactatttgtaggtgaatggccaaatttcaatcctggcaaaagcagctgaaatatgcttctcaccctggtcatcctgcaatgtcaacaaccaaagtgaacataaaaaaatctgtgaagtcctgaaaactaatgctagatacttgacaaacatttcgttagcatgagtttatctaatttgaaaaaacttctaaatgttaagaaaatatattcctgatgggcaacacattaaaattttgttgacagaagggtattccttttccaaaa
gi|12 : agcaaaatatctggcatacaagcagaaaatttacttgaaaataaagcctttattccaggtaggtcattactAATTAGTGCG--TA-TATTCGAGGTAGGTCATTACTAGCGTTGAAGTTAATAGA--TTTACCTAAAGGTGTGTGCCATTTACAGGGAGGATCA-----AATGGCGTGTAGTGTTATTTGTAGGTGTGTAGTCATATTTCTATTTGTGCAACAACAGTTGAGAG-ATTCTACTGGCGCTGGTGGTCCTGTAAC--GTTA--AC---A-ACCACAGAGAAC-----------ATCCGCATTATCCTGAAAA------CCAATGCTT-GATAC--------AT----CATACGACACTT--AGCTCAGGTGACAA-CC-TT---GTAAGCAAGAGTT----------------------------CATCTAAAGGTTAAGATAATAAATGCa
gi|13 : acACTGTT-------CTCT--CTC--AC-CC----CAT-------CCATACTAG---CCAGATTTGGCCCATTG-----TG----------------T----------------TTTTTTACTC--------------TTCCCAAGAC---AAA---AAGTACTTGTCCGG-AAGGG----ATAT---AACT--CG-AGAGA-TGCCGT-GTGATCTGC-T-ATAT-ACCAGTGTCTTAAGGAAATTACTGTTC-AAGAATACG-A-A--AGA-T-GTTTT--------------CAAAATTGG-A--TTGCG--T---G--GTTTAAAAC-GTTTGTTTT---AGCCA-----A-----------TCTGAAGGAA-ATTGAAAAA-------TAAAT-TGATAA-A-AAATTATTG---TAATATTCTAGTAACAATA
gi|13 : GCGTTCCATAAATAATACGAT---TG--GTATTGTTACTAGAATAT--TACAATAccaatcgtattatttatggaacgcttct
gi|14 : actgttctctctcaccccatccatactagccagatttggcccattgtgtttttttactcttcccaagacaaaaagtacttgtccggaagggatataactcgagagatgccgtgtgatctgctatataccagtgtcttaaggaaattactgttcaagaatacgaaagatgttttcaaaattggattgcgtggtttaaaacgtttgttttagccaatctgaaggaaattgaaaaataaattgataaaaaatTAGG---------CCACGGAAAATGTGAGACG--CGCATGTATTGCCAAA-CGATAACGATCTGTGTAGCAGGTTCTGTATGCAATAGTTTTCATT--AGCAACG-GTCCT---GCTGTACAGACA-GTGGTGCCA---AAGTGCAGAACTGTCACAGGACGGTTTT-TATAAAAAC--GTAATTT--AAATAATTGAAGAAGTACTACAAACAGCGTCGTCCTAT-A-ACAGG----TCTGAAGTATGTTTGTCTTTTGCATGACAATGCGCCAGCCCACAATA---CCCGTATTGTGACTTGATAT-TTTACAGTCAGAGAAGGTCACCGTttct
gi|15 : CTTGAAATTTGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGATATTGAA-GTCATATACCAAG--GAGTGTGACATTTATGGGGAGGGTCA-----AATGTCGTATAGTAATATTTGTAGGTGGGTGGCAAATTTTTAATCCAGGCAACAGTACTTGAAAC-ATACTGCTTGCCCTGGTCATCCTGTAACCTGT-A--A----G-ACCAAAGA--------AAAAA-AATCTCTGAAAT-CTGAAAA--------------T-GATAC--------AT----AGTAAGAGTGTTAAAGCTTGGATAACAA-AC--------TAG-------TCATCA-AAT---T----T--TGAAAAAGCATTTAAA
gi|16 : TTCCGTTAATAATGCGAC---TTTTGTATTATTTCTCGGAAAT------ATATG----TA---TGAAACATTTTCGTGGCGTTGGTGCGTAGGCCTACTGAAACACACT-G---G-T-ACATA-T-CTGCCTCAAATATTCACTGCCCTTGGTGTAATGTACATTGTTTGA-----------TAG--------------T---GT--------------ATTCATACCACTGTAATACTATGCA--A-----------AATGACTGGCAAACGAGC-GAAAAT-TGCTTGAAACTACGGCC--TA-TGGTCGAGGTAGGTCA------AGG-TGAAGTCGAAATACATTTACCGATAGTAGTGTGACATCTct
gi|17 : tggaCT-AAGATCGGC-T-ATGT-ACCAGTGTCTTAAGGGTACTTTTGTTC-AAGAATACG-A-A--A-AAT-GTTTTTCAATATTTATTTGCAAAATT-GGA--TAGCG--C---G--ATTATAAAC-TTGTGTTTC---ACATA-----TAAGAGAGTAT-CTAGAAGGAA-GT--AAAAA-------AAAATATGGT-ATA-AAATAAATA---TAGTACTCTAGCAATAATA
gi|17 : GGTGTTCCGCAAAGAAAGCGAC---TAT--TATTATTGCTatagtcgctttctttgcggaacacc
gi|18 : ctaagatcggctatgtaccagtgtcttaagggtacttttgttcaagaatacgaaaaatgtttttcaatatttatttgcaaaattggatagcgcgattataaacttgtgtttcacatataagagagtatctagaaggaagtaaaaaaaaatatggtataaaataaatatagtactctTATTTTATAAATAATGCCAC---TGGTGTATTATTTCTTTGAAATCTC---------------------ATAACTTTGTATCGCTAGAAAG---ATC-ACTGGTGCAAGTC-GCTGGTT-AAA-A-T-CTG--TTAAATATTCACTGACCTTGGTGCAATGTACATAGCTTTG-----------TAG--------------T---TT--------------AT--------------------TCATTACACTGTATGGTAATTACTGGCAAACAAGCTGAAAATGTGCTT
gi|19 : aaCTGTTC-ACGAATACG-A-A--A-TAT-GTTTTG-------------CAAAATT-GCA--T--TG--C---GCTGTTAAAAAA-GTCTGTTTT---AGTTA-----AATGGGATGAT-TTTGAAAAAATATCGAAAAAAATCGCTAAAAT-TGAT---A-TAATGATTATTGTAGTAGTCTGGTAATAATA
gi|19 : GGTGTTTCGTAAATAATGCGAT---TG--GTATTATTccaatcgcattatttacgaaacacc
gi|2 : ctgttcacgaatacgaaatatgttttgcaaaattgcattgcgctgttaaaaaagtctgttttagttaaatgggatgattttgaaaaaatatcgaaaaaaatcgctaaaattgatataatgattattgtagtagtctggtTATTTCGTTGAAATCGTGCAATATA----TA-GATCAGACAATTTGGTATCACTAGCTTG---ATC-ACTGGTGCGTGTTAGA-GC-T-AAA-A-AACTGCCTCAAACCATCGCTGATCTTGGTGCAATATACTTTGCTTGAAATTGTATTCATAG--------------CACTGT--------------AT--------------------GCA--A-----------AACGACTGGCAAACGAGCTAAGAATGTGCTTGAAACTAGAGCC--TA-TATTCGAGGAAGGTCATTACTTGGATTGAAGTTAAAAGATTTTTACCGAAAGGTGTGTGGCATTTATGGGAAGGGTCA-----GTTGTCGTAAAGTACTATTTGTATGTGGATTACCAAATATCTATCCGGGCAACAG-----AAAAGCGTGTTGCTCACCCTGGTCGCCCTGTAAC--CAGA--GC---ATATCGAATAA---AT----AAA-AATT------ATCCTGAAAAATAGTGC-------TCGATAT--------AC----AGTAAGAGATTT--AACTCGGATGACAA-AC-TTGTCGTTAGCACAAATACATCT-AGT---T----T--TGAACAAGCATTTCAAAATTAAGAAAA-AAA-GCACGAT----GGATACCACA-------TTTG--TTG--AC-A-AACAAAATAA-A----------AAAAAG--GGTT--GCTATGGCGAAAACGATTTG-GAAAATA-AATCAAAACCTCTTTTGAGAATATAGGTAGGAGTGATCTCGGAAAAT-CGATACG--CCCATGTTTTTCCAAA-TGTGTGTAATATGTTAAGAAGTTTATACTTGCAATATTTTCC-CT--AGTAACA-GTCCT---GCTGTTCAGACA-A-AGTGCCA---AATGGCAGAACTGTCACAGGACGG-TTTATAT----AC--GTAACTTTGAAACAATTGAAGAAGTACTACAAAAAGCGTTGCCCTAT-A-TCAGG----GCTGAAGTATGTTCGTCTTTTCCATAACTACGTGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACTT-TTTGTAG
gi|2 : AA---AAACACTTGTCTAGGAAAAT----GTAC---AACC--CG-AGA-AATGCCCT-GAGATCTGC-G-TT-T-ACCCTTGTTTTGAGGGTATACCTTTTC-AAGAATACGAA-A--A-A-T-GTTTT--------------CATAATTAG-A--T--TG--CACTG--TTTTAAAAT-GTGTGTTTT---AGCTA-----TAT-TAAGTAT-TTTGAAGGAA-AT-AACAAA-------GAAAT-TG-----A-ATATAATTA---TAGTATTCTAGTAGCAATAactaaaaacacttgtctaggaaaatgtacaacccgagaaatgccctgagatctgcgtttacccttgttttgagggtataccttttcaagaatacgaaaaatgttttcataattagattgcactgttttaaaatgtgtgttttagctatattaagtattttgaaggaaataacaaagaaattgaatataattatagtattctagtagcaataccaattgcattattaacataacacccc
gi|20 : tatttcgttgaaatcgtgcaatatatagatcagacaatttggtatcactagcttgatcactggtgcgtgttagagctaaaaaactgcctcaaaccatcgctgatcttggtgcaatatactttgcttgaaattgtattcatagcactgtatgcaaaacgactggcaaacgagctaagaatgtgcttgaaactagagcctatattcgaggaaggtcattacttggattgaagttaaaagatttttaccgaaaggtgtgtggcatttatgggaagggtcagttgtcgtaaagtactatttgtatgtggattaccaaatatctatccgggcaacagaaaagcgtgttgctcaccctggtcgccctgtaaccagagcatatcgaataaataaaaattatcctgaaaaatagtgctcgatatacagtaagagatttaactcggatgacaaacttgtcgttagcacaaatacatctagttttgaacaagcatttcaaaattaagaaaaaaagcacgatggataccacatttgttgacaaacaaaataaaaaaaagggttgctatggcgaaaacgatttggaaaataaatcaaaacctcttttgagaatataggtaggagtgatctcggaaaatcgatacgcccatgtttttccaaatgtgtgtaatatgttaagaagtttatacttgcaatattttccctagtaacagtcctgctgttcagacaaagtgccaaatggcagaactgtcacaggacggtttatatacgtaactttgaaacaattgaagaagtactacaaaaagcgttgccctatatcagggctgaagtatgttcgtcttttccataactacgtgccagcccacaaagcccgtattgtgactgactttttgtagactAAA-A-GA--ATAGCATCGAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACA--CCCATGTATTGCCAAA-TGATTGCGATCTGTTAAGAA-GTTATGTATACccaattgcattattaacataacacccc
gi|21 : aaaatatatgggaaaacattgtttcaatttttaatactttttgccatagttttaaaatatggattttTC-TAGAATGCG-A-ATAA-C-A-ATTCT----------------AAATT-G-AATTG-CG--C---A--CTTGCAAAC-ATGTGTTT----AACTA-----AAAGGGAGACT-TTTGAAGGAA-ATCCAATAG-------GAAAT-TGAT-A-G-AAATGGTTA---TTGTACTCTAGCAACAATA
gi|21 : TGTTACGTAAGTAATGCGAT---TG--GTATTGTTGC-TAGA----GTACAATAccaatcgcattacttacgtaacaggaac
gi|22 : tctagaatgcgaataacaattctaaattgaattgcgcacttgcaaacatgtgtttaactaaaagggagacttttgaaggaaatccaataggaaattgatagaaatggtTGTTTTGAAGGAG----ATAA---AACT--AG-AGA-AATGCTCG-GGAATGTGA-T-AT-TTACAAGTGTCTTAAGGATATACCTTTTCAAAAAATACG-G-AT-A-T-T-GTTTT--------------CAAAATT-------------------------------TG---------AGCCA-----AAGGAGAATAT-TCTGACGGAA-CTTGCAAAA-------CAAAT-TGAT-ggaac
gi|23 : TTT--------------CAAAATT-G-AATTG-TG--C---A--GTTATAAAC-ATTTGTTTC---AGCTA-----AAGGGGAGTAC-TATGAAAGA-----GTG----------------TGTC-C-A-CAATTATTA---TAGTATTCTAGTAACAA
gi|24 : ttccttttccaaaaaaaTTTAAC---AGCAGCG-GTCCTG---CCGTACAGATA-GTGGTGCCATTTGAAGGCAGAACTGTCGCAGAAAAG-TTT-TATAAAAAC--GTAATTTTGAAACCACTAAACAAGTA-TATAA----CG------TGTAA-A------------AAGTAGGTTCGTCCTTTGCAatccaatcacagtttttatggaacacccctc
gi|25 : c--AGCAATG-GTCCTGT-G--GTACAGACA-GTGGTGCCA---AAGGGCAGAATTGT-ACAGGACAG-TTT-TATAAAAAAAAGAAATTTTAAAACAATTGAAGAAGTACTGCATACAGCATCGCCCTAT-A-ACAG
gi|26 : TATGTTCGCATTTTGCATGACAACTTGCCAGTCCACAAAA---CCAATATTGTGAC-CGACGT-TTTGCAGTCAGAGAAGGTCGCCGTT-------CTCG--CTC--TG-CC----C---------CAATACTT----CCA
gi|27 : GAAGTATGTTTGTCTTTTGCATGACAACACATCATCCCACAAAG---TCCATATTGTGAC-CGACTT-TTTGCAGTCAATGAAGATCACTTTT-------CTCC--GTC--AA-CC----C-T-------C-ATACTag
gi|28 : GCAACGTACATTGTCTTA-----------TAA--------------C---GTGCTTGTTACTCTGTAT--------------------ACA--T-----------AATGACTGGAAAAC--------ATTGTGCTGTAAATTAGGACCTATA-TATTACAGGTAGACTGTTAATTG
gi|29 : G-ATGCTGCTCACACTG-TCGTTTTGTATC--ATCA--AC---A-ACCAAAGAAAACAG--AAAAA-AA-CTGCCAAATCTTGAAAA------C-------
gi|3 : TGGG---------TCAAGGAAAATATTAGAAA--TCCATGGATTGCCAAA-CGATTGCAATCTGTAAAGAGGGTTATGTATGCAATATTTTT-ACT--AGCAATA-GTCCTG---CCGTACAGATA-GCGGTGCTA---AAGGACAAAACTGTTACACGACGG-TAT-TTTAAAAAA--GTAATTTTGAAACAACTGAAAAAGTACTACAAACAGCGTCGCCCTAT-A-ACAGG----TCTGGAGTATGTTCGTCTTTTGCATGACAACACACCATCCCATTAAG---CCTGTATTGTGAT-TGACAT-TTTGCAGTCAAAGAACTTCATCGTTCCACTCACTCCCGCTCCTAC-CCA---C-TCTACTCGCAATACTTGGGCCCGTAT----------GCCTATTT----------------T----------------T------ATT--------------TTCCAAAAACT-AAAA---ATACATATGTCAGGGACGAAACATATAT---AACT--CG-AGACA-TGCCCT-GGAATCTGC-T-CTGT-ATCAGCGTCTTAAGAGTTTACTTGTTT-AAGAATACG-ACA--A-A-C-GTTTT--------------CAAAACT-GAA--TTACG--T---G--GTTAAAAGC-GTGTGGTTT---AGATA-----AAAGGGAGTAT-TTTGGAGGAA-ATTGCAAGA-------TAAAT-TTAT-A-A-AAATG-TTA---
gi|30 : ccCGCAAAA-------GATAT-TGAT-A-A-AAATGAGTA---TAGTTTTCCAGTAACAATAatcaagggagataatagtagtgtgattcctgaaagtcagtgat
gi|30 : TGTTCGGTGAATAATGCGAT---TG--ATATTGTTAC-TGGAAAtcaatcgcattattcaccgaacatacct
gi|31 : cgcaaaagatattgataaaaatgagtatagtGACACC-CGCCAATCCATAAAC---CCCTCATTTTGAC-TGACATGTTTGTTGTCAGAGAAGGTCACtacct
gi|32 : -A-A-AAATGATTA---TAG---TCTAGTCACAATA
gi|33 : GGGTGCTCCATAAATAAGGCGACGACTGCTGTATTATTTCTTGGAAATCATccgatcccattatttacgtaacacccctcgta
gi|34 : ATTATTTCTTGCAA-TCATGCAATGTA----TA-AATAAAACAACTTGGTATa
gi|35 : AAGTATGTTCGT--TTTACATGACAACGCACCAGCCCACAAAG---a
gi|4 : aTAGTGGC--TA-TATTCGAGGTAGGTTATTACATGGGTTGAAA-------ACATTAACCGAGAGGTGTGTGGCGTTTACGGGGAGG--CATAAAAGATG--GTATTGTACTACTTGAAG-----------------AA---GGG-------AGTTGAAAG-ATGCTGCTCGACCAGGTCGTCCGATAAC--GTCA--AC---A-ACCAAAGAAAACATC-AAAAC-AATCCGTGAAAGCCTGAAAA------C-------T-GATGCTCG-----AAACACAGTAAGAGACTT--AGCTCGGATGACAA-AC-TTGTCGTTAACACGTGTTCGTCT-AAT---T----TAAAAAAAAAACATCTAAAAGTT------ATAAATGCATGAT----GAATACCGCA-------TTTG--TTGACACGA-ACCAAAAGCA-GTCCGTa
gi|4 : GTGA---------G-CCAAA-ATGA--AAAGCATCTAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACG--CGCATGTATTCCCAAA-CTATTGCGATATGTTAAAAAAGTTCTGTATGCATTGTTTTT-ACT--TGCAACG-GTCCT---GCTATACAGACAGGCGGTGCCA---AATTGGAGAACTGTCATAGGACGT-TTT-TAaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|5 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaagGGATGTTCTGTAAATAATGCGAT---CGCCATATTATTTCGTGGTAACCGTGCAACATAATATTATAATGATACAACTTGGTACCGCTAGAGTG---ACT-ATTGGTACGTGTC-ACAGG-T-AAA-AAT-CTGCCTCAAACATTCACTGACCTTGGTGCAAAGTTCATTGCTTGA-----------TAG--------------C---GT--------------ATTCCTT---------------ACA--ATGTATGAT---AATGACTTGCAATCGAGCTGCAAATGTGTTTGAAATTAGGGCC--TA-TATTCGAGGTAGGT------------TGATGTCGAAAGCCATTTACCAAGA--TGTGAGACATTTACGGGGAGGGTCA-----GATGTCATATATTACTATTTGTAGGCGGGCGGCCAAATTGTAATCCGAGCAACAGCAGTTGAAAG-ATGCTGCTCGGCCTGGTCGTCTTGTAAC--ATCACTACCAAA-GCCAAAGAAAACGTAGAAAAA-AATCCATGACAACCTGAAAA------C-------T-GAAGCA-------A-----AACAAGAGATTT--AGCTCGGATAACAA-AC-TTATCGTTAACGCGAATTCATCTAAATATAT----T--TAAAAA
gi|6 : TGTAAC--GTCA--AC---A-ACCAAAGAACACAT--TGAAATAATCCGCGAAATCTTAAAAT------T-------T-GATGT--------A-----AG--AGAGGC----AGCTCGGATG--------------CTAGCACGAATTCATAT-AAT---TCAAGT--TAGAATAGCATTTAAATGTTAAGAAAATAAATGCACGATTCACGAAGTCAAGG-------GTTGCTTTG--GCGA-AA-AAAAGAA-AAT-GTTTTCGAAATAC--AGCCAAACTATTGCGA---------tga
gi|6 : aAGACAT--GGCTCCATTATTATGA---------G-TAAAA-A-AA--AAA-CTTCTACC-AGAATTTGGG---------ACGCAGAAAATGCGAAACA--CCCATGTATTGCCAAA-CGATTGTGACCAGTTTAGAAAGTTATGTATGCAATGTTTTTCACT--AGCAACG-GTCAT---GTCGTACAGACA-GCGATGCCA---AATGGCAGAACTATCACAGAGCGA-TTT-TAT-AAAAC--ATAATTCTAAAAGAATTAAAGAAGTACTACAAACAGCGTCGCCCTAT---ACAGG----GC-------TGTTCGTCTTTTGCATAACAACACaagtagtacgagttataagacatggctccattattatgagtaaaaaaaaaacttctaccagaatttgggacgcagaaaatgcgaaacacccatgtattgccaaacgattgtgaccagtttagaaagttatgtatgcaatgtttttcactagcaacggtcatgtcgtacagacagcgatgccaaatggcagaactatcacagagcgattttataaaacataattctaaaagaattaaagaagtactacaaacagcgtcgccctatacagggctgttcgtcttttgcataacaacacaa
gi|7 : atgtaacgtcaacaaccaaagaacacattgaaataatccgcgaaatcttaaaatttgatgtaagagaggcagctcggatgctagcacgaattcatataattcaagttagaatagcatttaaatgttaagaaaataaatgcacgattcacgaagtcaagggttgctttggcgaaaaaaagaaaatgttttcgaaatacagccaaactattgcgaaagtagtacgagttataCCATATATAATACGAC---TGCTGTATTATTTCTTGGAATTCATGCAATATA----TA-ATTGAAACAACCTTATATCCCTAAATTG---ATC-ACTGGTGCATGTC-GCAGG-TAAAA-A-T-CAGCCTTAAATATTCATTGATCTTGGTGCAATGCACATTGCTTTA-----------AAGTGTATTCATTACACT---GT--------------AT--------------------GCA--A-----------AATGACTTGCAAACAAACTGAAAATCTGCTTGAAATTATGCCCGATATTATTCAAGGTAGGTCATTACTTGAGTTGAAGTTGAAaa
gi|7 : ATAGCAC-ATTTGTAGATGGGTGAACTGATTTTGATTTGGGTAACAATAGTTGAAAG-ATGCTGCTCGCACTGGTC---CTGTAAC--ATCA--AC---A-ACCAAAGAAAACATT-GAAAA-AATCTGTGAAATTCTGAAAA------C-------T-GATGCTTGATATGA-----AGTAGAAGACTT-------GGATG-----------TTGTTACCACCAGTT----T-AGT---T--------------GCATCTAAAAGTTAAGAAGACAAATGCAtttttttttttctgcaaggtaaatagcacatttgtagatgggtgaactgattttgatttgggtaacaatagttgaaagatgctgctcgcactggtcctgtaacatcaacaaccaaagaaaacattgaaaaaatctgtgaaattctgaaaactgatgcttgatatgaagtagaagacttggatgttgttaccaccagtttagttgcatctaaaagttaagaagacaaatgca
gi|8 : ccatatataatacgactgctgtattatttcttggaattcatgcaatatataattgaaacaaccttatatccctaaattgatcactggtgcatgtcgcaggtaaaaatcagccttaaatattcattgatcttggtgcaatgcacattgctttaaagtgtattcattacactgtatgcaaaatgacttgcaaacaaactgaaaatctgcttgaaattatgcccgatattattcaaggtaggtcattacttgagttgaagttgaatttttttttttctgcaaggtaaCATGAAAAATG--AGACCATCCCATGTATTGCCAAAATGAATGTGAT-TGTTAAGAAGGTTCTGTATGCATTTTCTTTCACTTAGGTAACATGTCCTG---TCATACAGATG-GCAATCACA---AAGGGCTAAACAATCACCGGACA--TTT-TATTAAAAT--GTCATATTGAAATAATTGATGAAGCACTACAAACAGCATAGTCTTGTTG-G-AGT----TCTGAATTATATTCATTTGTTGCATGACAATGCGCCAGCCAACA--G---TCCTTATTGTGCC-TGACCT-CTTACAGTTAGAGAAGGTCACCATT-------CTCC--TCC--ACACC----C-C-------CAATACTCA---CCAGAC----------A-----TG----------------TCCCCCTGTAATAATTAT------CTC--------------TTCCTAAAACAAAAAAAAGAAACACTTTTCTGTGAAGAA----ATAT---AACT--TGCAAA-A-TGACATAGGAATCTGA-TAAT-T-A-CAGTGT-TTAAGGGTACATATGTTG-AAAAATA
gi|9 : GCAAAATAGTCACAGAACG--TTT-TATAAA-----------------TAACTGAA------------ACAGCGTCGCC-TGTAA--CAGG----TCTGAAGTGTGATCGTCATTTGCATGACAACATGCCAG-CCAAAAAGAAACCCATAGT-TCAC-TTATAT-TTTGCAGTCGGAGAAGGTCACTGTT-------CACG--CTCA-AC-GC----C-----------ATACTCA---CGAGAC----------A-----TG----------------C----------------C------CTCTGTGACTATTATTTTTCCCAAATCT-AAAA---AAACAATTGCCT--TAAG-G----ATATGCAAAC---AG-AAA-A-TGTCTT-
gi|9 : gcTGCCTTAAGGATATGC---------AAACA-G-A-A--A-A-T-GTCTT--------------CAATATT-GGA--T--TGTGC---G--GTTAAAAAAAGTATGTTAT---AGCTA-----AAGGGGAATTTATTTG-AGGAA-TTCGCCAAA-------C-AAT-TGAT-C-A-AAATAATTA---CAGTACTCGAGTAACAATAcaatattggattgtgcggttaaaaaaagtatgttatagctaaaggggaatttatttgaggaattcgccaaacaattgatcaaaataattacagtactcgagtaacaatacgaattgcattatttagggaacatccc
gi|9 : gcgcaaaatagtcacagaacgttttataaataactgaaacagcgtcgcctgtaacaggtctgaagtgtgatcgtcatttgcatgacaacatgccagccaaaaagaaacccatagttcacttatattttgcagtcggagaaggtcactgttcacgctcaacgccatactcacgagacatgccctctgtgactattatttttcccaaatctaaaaaaacaatGGATGTTCCCTAAATAATGCAAT---T--CGTATTGTTACTCGcgaattgcattatttagggaacatccc
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22 1111 111 111 333333333333 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 11111 111 22222222222222 55555555555555 222222222 111111111111 1111 2222222 11 1111111 111111 11111 22 333333333333 11 222222222 2222 2222 1111111 11 33333333333333 11111 444444444444444444444444444444444444444444444444444444444444444444444444444 11 111 11111 111 111111 22222222222222 555555555555555555555 11111111 111
lowQualScore : 555 22 0 2 66 1 2222 000 1 0 1 1 111 6 3 555555555555 6 6 888 2 0 0 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 3 2 11 4 0 0 1 1 0 0 1 44444 4 1 0 0 1 3 55 55 55 777 4 0 555 4 1 0 11111111111111 4 44444444444444 0 66 1 555555555 2 4 888888888888 1 0 1 0 7777 6666666 11 8888888 1 777777 22 55555 0 11 222222222222 8 8 11 3 1 1 8 1 222222222 0 66 5 2 0 1 1 7 66 4 9999 4 0 777 0 88 4 4 666 0 1111 9999 1 666 4 1 4 6666666 66 11 5 33333333333333 6 22222 222222222222222222222222222222222222222222222222222222222222222222222222222 1 77 000 0 1 3 00000 888 66 5 3 111 444 888888 5 1 0 0 888 3 3 3 7 7 3 3 55555555555555 111111111111111111111 22 3 6666 99999 2 3 3 4 1 33333333 3 222 3 555 1
lowQualScore : ... .. . . .. . .... ... . . . . ... . . ............ . . ... . . . ....................................................................................... . . . .. . . . . . . . . ..... . . . . . . .. .. .. ... . . ... . . . .............. . .............. . .. . ......... . . ............ . . . . .... ....... .. ....... . ...... .. ..... . .. ............ . . .. . . . . . ......... . .. . . . . . . .. . .... . . ... . .. . . ... . .... .... . ... . . . ....... .. .. . .............. . ..... ........................................................................... . .. ... . . . ..... ... .. . . ... ... ...... . . . . ... . . . . . . . .............. ..................... .. . .... ..... . . . . . ........ . ... . ... .
lowQualScore : 888 77 7 2 44 9 1111 999 7 3 0 0 777 7 7 888888888888 7 7 777 5 7 7 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 4 5 00 0 2 1 1 4 3 7 0 33333 9 4 2 2 0 4 66 55 55 000 0 7 999 0 4 5 11111111111111 4 77777777777777 8 11 9 777777777 9 4 000000000000 4 6 7 1 0000 0000000 00 6666666 4 888888 88 88888 2 55 888888888888 0 0 00 2 0 0 0 0 999999999 2 99 0 5 2 0 9 6 11 4 4444 4 9 888 1 11 0 8 222 1 9999 4444 6 444 0 0 0 2222222 99 99 0 99999999999999 4 77777 000000000000000000000000000000000000000000000000000000000000000000000000000 0 33 000 1 4 4 99999 888 99 0 4 000 999 111111 0 4 2 1 000 6 6 6 3 3 6 6 00000000000000 777777777777777777777 99 6 7777 11111 3 6 6 4 0 00000000 3 666 3 888 8
consensus : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-AACAAAAGGA-ANTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A-A-A-T-GTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
Reference ( family-1457 ) : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-AACAAAAGGA-ANTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A-A-A-T-GTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
gi|1 : GGTTGTTCCGTAAATAATGCGAC---TGCTGTATTCTTTCTTGCAAATCATGCCATATA----TA-AATAAAAAAACATTGTATCGCTAGAGTA---ATC-GCTGGT--------------T-AAG-A-T-CTGACTCAATCATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAA--------------C---GT--------------AT--------------------GCA--A-----------ATTGACTGGCCAACGAGCTGAAAATGTGCTTGAAATTATGGCC--TA-TATTCGATGTAGGTCATTACTTGAGTTGAAATCGAAAGGCATTTACTGAGAGGTGTGTAATATTTACGGGGAAGGTCA-----GATAGTATATATAATTATTTGTTGTTGGGTAGTCAGATTTCAATCTGGACAACAGCAGCTGAAA--ATGCAGCTCGCCCTGG-CGTACTCTAAC--GCCA--AC---A-ATCACAGAAAACAT--AAAAC-AATCCTCGAAATTACGAAAG------C-------T-GATGC----------------TGAGAGATTT--AGCTCCGATGACAACAT-TG-TTGTAAGCATGAAATCATCT-AAT---T----T--TAAAAAAGGTTTTAAAAGTTTTGAAAATAAATGAACGAT----GGATATCGCA-------TTTG--TTG--ACGAGGACAAAAAGA-AGTCATTTTTGAAA-ACTTGGGTTGGTTATTATGA---------GATAAAA-A-GA--AAAGCATACAAC-ATAAATTGGG---------CCACGGAAAATGCGAGACG--CCCATATATAGTAAAA-TGACTGCGATCTGCTAAGAAGGTTCTGTGTGCACTACCTTTTGCT--AGCCAAG-GTCCTGCAGCCGTACAGACA-GCGGTGCCA---AAGGGCAAAACTGCCACAGGACGG-TTT-TATACAAAC--GTAACTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAATACATGTAAATCTGAAGTATGTTTGTCTTTTACATGACATTGCAACAGCTCAAAATT---CTCGTGTTGTGAC-ATCCAT-TATGCAGTCAAAGAAAGTCGCCGTT-------CTCC--CTC--AC-CC----C-T-------CTATACTAG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTTCCAAGACTGAAAG---AAACATTTGTCTGGGAAGAG----ATAT---AAGT--CG-ACA-A-TATCCT-AGGATCTGCAC-AT-T-ACCTGTGTCTCAAGGGTATATCTGTTC-AAGAGTACG-A-C-A-T-T-ATTTT--------------CAAAATT-G-------CG--C---G--ATTGAAAAC-GTGTGCTTT---AGATA-----AACGGGAGTAT-TTTGAAGGAC-ATCGCATAA-------GAAAT-TAATCA-A-AAATGATTT---TAATACTCTAATAACAATA
gi|10 : CAGTGTCACCCTTTAA--CAGG----TCTGAAATATGTCTGTCTTTTGCATGACAACGTGCCAGCACACAAAG---CCTGTATTGTGGA-TAACTT-TTTGCAATC---------------T-------CTCC--CAC--AC-ACACAAC-C-------CAA-ACTAG---CTAGAT----------T-----TGGCCCTCTTTGACTATTT----------------T------CTC--------------TTCCAAAAACTAAAAA---AG---CTTGTCTGGAAAGAT----ATAT---AACTTCCG-A-A-A-TGCCCT----------------------------TAAGGGTAT---TGCTC-AAGAATATG-A-A-A-A-TTGTTTT--------------CAAAATT-GGA--C--TG--C----------AAGGC-ATGTGTTTTTTCATCTATAACAAACAGGAGTAT-TTTGAAAGAA-ATCAGAAAA-------ACAAT-TTAT-C-ATAAATGGTAA---AAGTATTCTAGTACCAATAtaa
gi|11 : --------------------GCA--A-----------AATATCTGGCATACAAGCAGAAAATTTACTTGAAAATAAAGCC--TT-TATTCCAGGTAGGTCATTACTTcccatcccattacatatggaacac
gi|11 : aTCA-----AATTTTGTTAAGTACTATTTGTAGGTGAATGGCCAAATTTCAATCCTGGCAAAAGCAGCTGAAAT-ATGCTTCTCACCCTGGTCATCCTGCAAT--GTCA--AC---A-ACCAAAGTGAACAT--AAAAA-AATCTGTGAAGTCCTGAAAA------C-------T-AATGC----------------T-AGATACT-----------TGACAA-ACATT-TCGTTAGCATGAGTTTATCT-AAT---T----T--GAAAAAA-CTTCTAAATGTTAAGAAAATATATTCCTGAT----GGGCAACACATTAAAATTTTG--TTG--------ACAGAAGGGTATTCCTTTTCCAAAcaaattttgttaagtactatttgtaggtgaatggccaaatttcaatcctggcaaaagcagctgaaatatgcttctcaccctggtcatcctgcaatgtcaacaaccaaagtgaacataaaaaaatctgtgaagtcctgaaaactaatgctagatacttgacaaacatttcgttagcatgagtttatctaatttgaaaaaacttctaaatgttaagaaaatatattcctgatgggcaacacattaaaattttgttgacagaagggtattccttttccaaaa
gi|12 : agcaaaatatctggcatacaagcagaaaatttacttgaaaataaagcctttattccaggtaggtcattactAATTAGTGCG--TA-TATTCGAGGTAGGTCATTACTAGCGTTGAAGTTAATAGA--TTTACCTAAAGGTGTGTGCCATTTACAGGGAGGATCA-----AATGGCGTGTAGTGTTATTTGTAGGTGTGTAGTCATATTTCTATTTGTGCAACAACAGTTGAGAG-ATTCTACTGGCGCTGGTGGTCCTGTAAC--GTTA--AC---A-ACCACAGAGAAC-----------ATCCGCATTATCCTGAAAA------CCAATGCTT-GATAC--------AT----CATACGACACTT--AGCTCAGGTGACAA-CC-TT---GTAAGCAAGAGTT----------------------------CATCTAAAGGTTAAGATAATAAATGCa
gi|13 : acACTGTT-------CTCT--CTC--AC-CC----CAT-------CCATACTAG---CCAGATTTGGCCCATTG-----TG----------------T----------------TTTTTTACTC--------------TTCCCAAGAC---AAA---AAGTACTTGTCCGG-AAGGG----ATAT---AACT--CG-AGAGA-TGCCGT-GTGATCTGC-T-ATAT-ACCAGTGTCTTAAGGAAATTACTGTTC-AAGAATACG-A-A-AGA-T-GTTTT--------------CAAAATTGG-A--TTGCG--T---G--GTTTAAAAC-GTTTGTTTT---AGCCA-----A-----------TCTGAAGGAA-ATTGAAAAA-------TAAAT-TGATAA-A-AAATTATTG---TAATATTCTAGTAACAATA
gi|13 : GCGTTCCATAAATAATACGAT---TG--GTATTGTTACTAGAATAT--TACAATAccaatcgtattatttatggaacgcttct
gi|14 : actgttctctctcaccccatccatactagccagatttggcccattgtgtttttttactcttcccaagacaaaaagtacttgtccggaagggatataactcgagagatgccgtgtgatctgctatataccagtgtcttaaggaaattactgttcaagaatacgaaagatgttttcaaaattggattgcgtggtttaaaacgtttgttttagccaatctgaaggaaattgaaaaataaattgataaaaaatTAGG---------CCACGGAAAATGTGAGACG--CGCATGTATTGCCAAA-CGATAACGATCTGTGTAGCAGGTTCTGTATGCAATAGTTTTCATT--AGCAACG-GTCCT---GCTGTACAGACA-GTGGTGCCA---AAGTGCAGAACTGTCACAGGACGGTTTT-TATAAAAAC--GTAATTT--AAATAATTGAAGAAGTACTACAAACAGCGTCGTCCTAT-A-ACAGG----TCTGAAGTATGTTTGTCTTTTGCATGACAATGCGCCAGCCCACAATA---CCCGTATTGTGACTTGATAT-TTTACAGTCAGAGAAGGTCACCGTttct
gi|15 : CTTGAAATTTGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGATATTGAA-GTCATATACCAAG--GAGTGTGACATTTATGGGGAGGGTCA-----AATGTCGTATAGTAATATTTGTAGGTGGGTGGCAAATTTTTAATCCAGGCAACAGTACTTGAAAC-ATACTGCTTGCCCTGGTCATCCTGTAACCTGT-A--A----G-ACCAAAGA--------AAAAA-AATCTCTGAAAT-CTGAAAA--------------T-GATAC--------AT----AGTAAGAGTGTTAAAGCTTGGATAACAA-AC--------TAG-------TCATCA-AAT---T----T--TGAAAAAGCATTTAAA
gi|16 : TTCCGTTAATAATGCGAC---TTTTGTATTATTTCTCGGAAAT------ATATG----TA---TGAAACATTTTCGTGGCGTTGGTGCGTAGGCCTACTGAAACACACT-G---G-T-ACATA-T-CTGCCTCAAATATTCACTGCCCTTGGTGTAATGTACATTGTTTGA-----------TAG--------------T---GT--------------ATTCATACCACTGTAATACTATGCA--A-----------AATGACTGGCAAACGAGC-GAAAAT-TGCTTGAAACTACGGCC--TA-TGGTCGAGGTAGGTCA------AGG-TGAAGTCGAAATACATTTACCGATAGTAGTGTGACATCTct
gi|17 : tggaCT-AAGATCGGC-T-ATGT-ACCAGTGTCTTAAGGGTACTTTTGTTC-AAGAATACG-A-A-A-AAT-GTTTTTCAATATTTATTTGCAAAATT-GGA--TAGCG--C---G--ATTATAAAC-TTGTGTTTC---ACATA-----TAAGAGAGTAT-CTAGAAGGAA-GT--AAAAA-------AAAATATGGT-ATA-AAATAAATA---TAGTACTCTAGCAATAATA
gi|17 : GGTGTTCCGCAAAGAAAGCGAC---TAT--TATTATTGCTatagtcgctttctttgcggaacacc
gi|18 : ctaagatcggctatgtaccagtgtcttaagggtacttttgttcaagaatacgaaaaatgtttttcaatatttatttgcaaaattggatagcgcgattataaacttgtgtttcacatataagagagtatctagaaggaagtaaaaaaaaatatggtataaaataaatatagtactctTATTTTATAAATAATGCCAC---TGGTGTATTATTTCTTTGAAATCTC---------------------ATAACTTTGTATCGCTAGAAAG---ATC-ACTGGTGCAAGTC-GCTGGTT-AAA-A-T-CTG--TTAAATATTCACTGACCTTGGTGCAATGTACATAGCTTTG-----------TAG--------------T---TT--------------AT--------------------TCATTACACTGTATGGTAATTACTGGCAAACAAGCTGAAAATGTGCTT
gi|19 : aaCTGTTC-ACGAATACG-A-A-ATA-T-GTTTTG-------------CAAAATT-GCA--T--TG--C---GCTGTTAAAAAA-GTCTGTTTT---AGTTA-----AATGGGATGAT-TTTGAAAAAATATCGAAAAAAATCGCTAAAAT-TGAT---A-TAATGATTATTGTAGTAGTCTGGTAATAATA
gi|19 : GGTGTTTCGTAAATAATGCGAT---TG--GTATTATTccaatcgcattatttacgaaacacc
gi|2 : ctgttcacgaatacgaaatatgttttgcaaaattgcattgcgctgttaaaaaagtctgttttagttaaatgggatgattttgaaaaaatatcgaaaaaaatcgctaaaattgatataatgattattgtagtagtctggtTATTTCGTTGAAATCGTGCAATATA----TA-GATCAGACAATTTGGTATCACTAGCTTG---ATC-ACTGGTGCGTGTTAGA-GC-T-AAA-A-AACTGCCTCAAACCATCGCTGATCTTGGTGCAATATACTTTGCTTGAAATTGTATTCATAG--------------CACTGT--------------AT--------------------GCA--A-----------AACGACTGGCAAACGAGCTAAGAATGTGCTTGAAACTAGAGCC--TA-TATTCGAGGAAGGTCATTACTTGGATTGAAGTTAAAAGATTTTTACCGAAAGGTGTGTGGCATTTATGGGAAGGGTCA-----GTTGTCGTAAAGTACTATTTGTATGTGGATTACCAAATATCTATCCGGGCAACAG-----AAAAGCGTGTTGCTCACCCTGGTCGCCCTGTAAC--CAGA--GC---ATATCGAATAA---AT----AAA-AATT------ATCCTGAAAAATAGTGC-------TCGATAT--------AC----AGTAAGAGATTT--AACTCGGATGACAA-AC-TTGTCGTTAGCACAAATACATCT-AGT---T----T--TGAACAAGCATTTCAAAATTAAGAAAA-AAA-GCACGAT----GGATACCACA-------TTTG--TTG--AC-A-AACAAAATAA-A----------AAAAAG--GGTT--GCTATGGCGAAAACGATTTG-GAAAATA-AATCAAAACCTCTTTTGAGAATATAGGTAGGAGTGATCTCGGAAAAT-CGATACG--CCCATGTTTTTCCAAA-TGTGTGTAATATGTTAAGAAGTTTATACTTGCAATATTTTCC-CT--AGTAACA-GTCCT---GCTGTTCAGACA-A-AGTGCCA---AATGGCAGAACTGTCACAGGACGG-TTTATAT----AC--GTAACTTTGAAACAATTGAAGAAGTACTACAAAAAGCGTTGCCCTAT-A-TCAGG----GCTGAAGTATGTTCGTCTTTTCCATAACTACGTGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACTT-TTTGTAG
gi|2 : AA---AAACACTTGTCTAGGAAAAT----GTAC---AACC--CG-AGA-AATGCCCT-GAGATCTGC-G-TT-T-ACCCTTGTTTTGAGGGTATACCTTTTC-AAGAATACGAA-A-A-A-T-GTTTT--------------CATAATTAG-A--T--TG--CACTG--TTTTAAAAT-GTGTGTTTT---AGCTA-----TAT-TAAGTAT-TTTGAAGGAA-AT-AACAAA-------GAAAT-TG-----A-ATATAATTA---TAGTATTCTAGTAGCAATAactaaaaacacttgtctaggaaaatgtacaacccgagaaatgccctgagatctgcgtttacccttgttttgagggtataccttttcaagaatacgaaaaatgttttcataattagattgcactgttttaaaatgtgtgttttagctatattaagtattttgaaggaaataacaaagaaattgaatataattatagtattctagtagcaataccaattgcattattaacataacacccc
gi|20 : tatttcgttgaaatcgtgcaatatatagatcagacaatttggtatcactagcttgatcactggtgcgtgttagagctaaaaaactgcctcaaaccatcgctgatcttggtgcaatatactttgcttgaaattgtattcatagcactgtatgcaaaacgactggcaaacgagctaagaatgtgcttgaaactagagcctatattcgaggaaggtcattacttggattgaagttaaaagatttttaccgaaaggtgtgtggcatttatgggaagggtcagttgtcgtaaagtactatttgtatgtggattaccaaatatctatccgggcaacagaaaagcgtgttgctcaccctggtcgccctgtaaccagagcatatcgaataaataaaaattatcctgaaaaatagtgctcgatatacagtaagagatttaactcggatgacaaacttgtcgttagcacaaatacatctagttttgaacaagcatttcaaaattaagaaaaaaagcacgatggataccacatttgttgacaaacaaaataaaaaaaagggttgctatggcgaaaacgatttggaaaataaatcaaaacctcttttgagaatataggtaggagtgatctcggaaaatcgatacgcccatgtttttccaaatgtgtgtaatatgttaagaagtttatacttgcaatattttccctagtaacagtcctgctgttcagacaaagtgccaaatggcagaactgtcacaggacggtttatatacgtaactttgaaacaattgaagaagtactacaaaaagcgttgccctatatcagggctgaagtatgttcgtcttttccataactacgtgccagcccacaaagcccgtattgtgactgactttttgtagactAAA-A-GA--ATAGCATCGAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACA--CCCATGTATTGCCAAA-TGATTGCGATCTGTTAAGAA-GTTATGTATACccaattgcattattaacataacacccc
gi|21 : aaaatatatgggaaaacattgtttcaatttttaatactttttgccatagttttaaaatatggattttTC-TAGAATGCG-A-ATA-A-C-AATT---------------CTAAATT-G-AATTG-CG--C---A--CTTGCAAAC-ATGTGTTT----AACTA-----AAAGGGAGACT-TTTGAAGGAA-ATCCAATAG-------GAAAT-TGAT-A-G-AAATGGTTA---TTGTACTCTAGCAACAATA
gi|21 : TGTTACGTAAGTAATGCGAT---TG--GTATTGTTGC-TAGA----GTACAATAccaatcgcattacttacgtaacaggaac
gi|22 : tctagaatgcgaataacaattctaaattgaattgcgcacttgcaaacatgtgtttaactaaaagggagacttttgaaggaaatccaataggaaattgatagaaatggtTGTTTTGAAGGAG----ATAA---AACT--AG-AGA-AATGCTCG-GGAATGTGA-T-AT-TTACAAGTGTCTTAAGGATATACCTTTTCAAAAAATACG-G-ATA-T-T-GTTTT--------------CAAAATT-------------------------------TG---------AGCCA-----AAGGAGAATAT-TCTGACGGAA-CTTGCAAAA-------CAAAT-TGAT-ggaac
gi|23 : -A-A-A-A-T----TT--------------CAAAATT-G-AATTG-TG--C---A--GTTATAAAC-ATTTGTTTC---AGCTA-----AAGGGGAGTAC-TATGAAAGA-----GTG----------------TGTC-C-A-CAATTATTA---TAGTATTCTAGTAACAA
gi|24 : ttccttttccaaaTTTAAC---AGCAGCG-GTCCTG---CCGTACAGATA-GTGGTGCCATTTGAAGGCAGAACTGTCGCAGAAAAG-TTT-TATAAAAAC--GTAATTTTGAAACCACTAAACAAGTA-TATAA----CG------TGTAA-A------------AAGTAGGTTCGTCCTTTGCAatccaatcacagtttttatggaacacccctc
gi|25 : c--AGCAATG-GTCCTGT-G--GTACAGACA-GTGGTGCCA---AAGGGCAGAATTGT-ACAGGACAG-TTT-TATAAAAAAAAGAAATTTTAAAACAATTGAAGAAGTACTGCATACAGCATCGCCCTAT-A-ACAG
gi|26 : TATGTTCGCATTTTGCATGACAACTTGCCAGTCCACAAAA---CCAATATTGTGAC-CGACGT-TTTGCAGTCAGAGAAGGTCGCCGTT-------CTCG--CTC--TG-CC----C---------CAATACTT----CCA
gi|27 : GAAGTATGTTTGTCTTTTGCATGACAACACATCATCCCACAAAG---TCCATATTGTGAC-CGACTT-TTTGCAGTCAATGAAGATCACTTTT-------CTCC--GTC--AA-CC----C-T-------C-ATACTag
gi|28 : GCAACGTACATTGTCTTA-----------TAA--------------C---GTGCTTGTTACTCTGTAT--------------------ACA--T-----------AATGACTGGAAAAC--------ATTGTGCTGTAAATTAGGACCTATA-TATTACAGGTAGACTGTTAATTG
gi|29 : G-ATGCTGCTCACACTG-TCGTTTTGTATC--ATCA--AC---A-ACCAAAGAAAACAG--AAAAA-AA-CTGCCAAATCTTGAAAA------C-------
gi|3 : TGGG---------TCAAGGAAAATATTAGAAA--TCCATGGATTGCCAAA-CGATTGCAATCTGTAAAGAGGGTTATGTATGCAATATTTTT-ACT--AGCAATA-GTCCTG---CCGTACAGATA-GCGGTGCTA---AAGGACAAAACTGTTACACGACGG-TAT-TTTAAAAAA--GTAATTTTGAAACAACTGAAAAAGTACTACAAACAGCGTCGCCCTAT-A-ACAGG----TCTGGAGTATGTTCGTCTTTTGCATGACAACACACCATCCCATTAAG---CCTGTATTGTGAT-TGACAT-TTTGCAGTCAAAGAACTTCATCGTTCCACTCACTCCCGCTCCTAC-CCA---C-TCTACTCGCAATACTTGGGCCCGTAT----------GCCTATTT----------------T----------------T------ATT--------------TTCCAAAAACT-AAAA---ATACATATGTCAGGGACGAAACATATAT---AACT--CG-AGACA-TGCCCT-GGAATCTGC-T-CTGT-ATCAGCGTCTTAAGAGTTTACTTGTTT-AAGAATACG-ACA-A-A-C-GTTTT--------------CAAAACT-GAA--TTACG--T---G--GTTAAAAGC-GTGTGGTTT---AGATA-----AAAGGGAGTAT-TTTGGAGGAA-ATTGCAAGA-------TAAAT-TTAT-A-A-AAATG-TTA---
gi|30 : ccCGCAAAA-------GATAT-TGAT-A-A-AAATGAGTA---TAGTTTTCCAGTAACAATAatcaagggagataatagtagtgtgattcctgaaagtcagtgat
gi|30 : TGTTCGGTGAATAATGCGAT---TG--ATATTGTTAC-TGGAAAtcaatcgcattattcaccgaacatacct
gi|31 : cgcaaaagatattgataaaaatgagtatagtGACACC-CGCCAATCCATAAAC---CCCTCATTTTGAC-TGACATGTTTGTTGTCAGAGAAGGTCACtacct
gi|32 : -A-A-AAATGATTA---TAG---TCTAGTCACAATA
gi|33 : GGGTGCTCCATAAATAAGGCGACGACTGCTGTATTATTTCTTGGAAATCATccgatcccattatttacgtaacacccctcgta
gi|34 : ATTATTTCTTGCAA-TCATGCAATGTA----TA-AATAAAACAACTTGGTATa
gi|35 : AAGTATGTTCGT--TTTACATGACAACGCACCAGCCCACAAAG---a
gi|4 : aTAGTGGC--TA-TATTCGAGGTAGGTTATTACATGGGTTGAAA-------ACATTAACCGAGAGGTGTGTGGCGTTTACGGGGAGG--CATAAAAGATG--GTATTGTACTACTTGAAG-----------------AA---GGG-------AGTTGAAAG-ATGCTGCTCGACCAGGTCGTCCGATAAC--GTCA--AC---A-ACCAAAGAAAACATC-AAAAC-AATCCGTGAAAGCCTGAAAA------C-------T-GATGCTCG-----AAACACAGTAAGAGACTT--AGCTCGGATGACAA-AC-TTGTCGTTAACACGTGTTCGTCT-AAT---T----TAAAAAAAAAACATCTAAAAGTT------ATAAATGCATGAT----GAATACCGCA-------TTTG--TTGACACGA-ACCAAAAGCA-GTCCGTa
gi|4 : GTGA---------G-CCAAA-ATGA--AAAGCATCTAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACG--CGCATGTATTCCCAAA-CTATTGCGATATGTTAAAAAAGTTCTGTATGCATTGTTTTT-ACT--TGCAACG-GTCCT---GCTATACAGACAGGCGGTGCCA---AATTGGAGAACTGTCATAGGACGT-TTT-TAaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|5 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaagGGATGTTCTGTAAATAATGCGAT---CGCCATATTATTTCGTGGTAACCGTGCAACATAATATTATAATGATACAACTTGGTACCGCTAGAGTG---ACT-ATTGGTACGTGTC-ACAGG-T-AAA-AAT-CTGCCTCAAACATTCACTGACCTTGGTGCAAAGTTCATTGCTTGA-----------TAG--------------C---GT--------------ATTCCTT---------------ACA--ATGTATGAT---AATGACTTGCAATCGAGCTGCAAATGTGTTTGAAATTAGGGCC--TA-TATTCGAGGTAGGT------------TGATGTCGAAAGCCATTTACCAAGA--TGTGAGACATTTACGGGGAGGGTCA-----GATGTCATATATTACTATTTGTAGGCGGGCGGCCAAATTGTAATCCGAGCAACAGCAGTTGAAAG-ATGCTGCTCGGCCTGGTCGTCTTGTAAC--ATCACTACCAAA-GCCAAAGAAAACGTAGAAAAA-AATCCATGACAACCTGAAAA------C-------T-GAAGCA-------A-----AACAAGAGATTT--AGCTCGGATAACAA-AC-TTATCGTTAACGCGAATTCATCTAAATATAT----T--TAAAAA
gi|6 : TGTAAC--GTCA--AC---A-ACCAAAGAACACAT--TGAAATAATCCGCGAAATCTTAAAAT------T-------T-GATGT--------A-----AG--AGAGGC----AGCTCGGATG--------------CTAGCACGAATTCATAT-AAT---TCAAGT--TAGAATAGCATTTAAATGTTAAGAAAATAAATGCACGATTCACGAAGTCAAGG-------GTTGCTTTG--GCGA-AA-AAAAGAA-AAT-GTTTTCGAAATAC--AGCCAAACTATTGCGA---------tga
gi|6 : aAGACAT--GGCTCCATTATTATGA---------G-TAAAA-A-AA--AAA-CTTCTACC-AGAATTTGGG---------ACGCAGAAAATGCGAAACA--CCCATGTATTGCCAAA-CGATTGTGACCAGTTTAGAAAGTTATGTATGCAATGTTTTTCACT--AGCAACG-GTCAT---GTCGTACAGACA-GCGATGCCA---AATGGCAGAACTATCACAGAGCGA-TTT-TAT-AAAAC--ATAATTCTAAAAGAATTAAAGAAGTACTACAAACAGCGTCGCCCTAT---ACAGG----GC-------TGTTCGTCTTTTGCATAACAACACaagtagtacgagttataagacatggctccattattatgagtaaaaaaaaaacttctaccagaatttgggacgcagaaaatgcgaaacacccatgtattgccaaacgattgtgaccagtttagaaagttatgtatgcaatgtttttcactagcaacggtcatgtcgtacagacagcgatgccaaatggcagaactatcacagagcgattttataaaacataattctaaaagaattaaagaagtactacaaacagcgtcgccctatacagggctgttcgtcttttgcataacaacacaa
gi|7 : atgtaacgtcaacaaccaaagaacacattgaaataatccgcgaaatcttaaaatttgatgtaagagaggcagctcggatgctagcacgaattcatataattcaagttagaatagcatttaaatgttaagaaaataaatgcacgattcacgaagtcaagggttgctttggcgaaaaaaagaaaatgttttcgaaatacagccaaactattgcgaaagtagtacgagttataCCATATATAATACGAC---TGCTGTATTATTTCTTGGAATTCATGCAATATA----TA-ATTGAAACAACCTTATATCCCTAAATTG---ATC-ACTGGTGCATGTC-GCAGG-TAAAA-A-T-CAGCCTTAAATATTCATTGATCTTGGTGCAATGCACATTGCTTTA-----------AAGTGTATTCATTACACT---GT--------------AT--------------------GCA--A-----------AATGACTTGCAAACAAACTGAAAATCTGCTTGAAATTATGCCCGATATTATTCAAGGTAGGTCATTACTTGAGTTGAAGTTGAAaa
gi|7 : ATAGCAC-ATTTGTAGATGGGTGAACTGATTTTGATTTGGGTAACAATAGTTGAAAG-ATGCTGCTCGCACTGGTC---CTGTAAC--ATCA--AC---A-ACCAAAGAAAACATT-GAAAA-AATCTGTGAAATTCTGAAAA------C-------T-GATGCTTGATATGA-----AGTAGAAGACTT-------GGATG-----------TTGTTACCACCAGTT----T-AGT---T--------------GCATCTAAAAGTTAAGAAGACAAATGCAtttttttttttctgcaaggtaaatagcacatttgtagatgggtgaactgattttgatttgggtaacaatagttgaaagatgctgctcgcactggtcctgtaacatcaacaaccaaagaaaacattgaaaaaatctgtgaaattctgaaaactgatgcttgatatgaagtagaagacttggatgttgttaccaccagtttagttgcatctaaaagttaagaagacaaatgca
gi|8 : ccatatataatacgactgctgtattatttcttggaattcatgcaatatataattgaaacaaccttatatccctaaattgatcactggtgcatgtcgcaggtaaaaatcagccttaaatattcattgatcttggtgcaatgcacattgctttaaagtgtattcattacactgtatgcaaaatgacttgcaaacaaactgaaaatctgcttgaaattatgcccgatattattcaaggtaggtcattacttgagttgaagttgaatttttttttttctgcaaggtaaCATGAAAAATG--AGACCATCCCATGTATTGCCAAAATGAATGTGAT-TGTTAAGAAGGTTCTGTATGCATTTTCTTTCACTTAGGTAACATGTCCTG---TCATACAGATG-GCAATCACA---AAGGGCTAAACAATCACCGGACA--TTT-TATTAAAAT--GTCATATTGAAATAATTGATGAAGCACTACAAACAGCATAGTCTTGTTG-G-AGT----TCTGAATTATATTCATTTGTTGCATGACAATGCGCCAGCCAACA--G---TCCTTATTGTGCC-TGACCT-CTTACAGTTAGAGAAGGTCACCATT-------CTCC--TCC--ACACC----C-C-------CAATACTCA---CCAGAC----------A-----TG----------------TCCCCCTGTAATAATTAT------CTC--------------TTCCTAAAACAAAAAAAAGAAACACTTTTCTGTGAAGAA----ATAT---AACT--TGCAAA-A-TGACATAGGAATCTGA-TAAT-T-A-CAGTGT-TTAAGGGTACATATGTTG-AAAAATA
gi|9 : GCAAAATAGTCACAGAACG--TTT-TATAAA-----------------TAACTGAA------------ACAGCGTCGCC-TGTAA--CAGG----TCTGAAGTGTGATCGTCATTTGCATGACAACATGCCAG-CCAAAAAGAAACCCATAGT-TCAC-TTATAT-TTTGCAGTCGGAGAAGGTCACTGTT-------CACG--CTCA-AC-GC----C-----------ATACTCA---CGAGAC----------A-----TG----------------C----------------C------CTCTGTGACTATTATTTTTCCCAAATCT-AAAA---AAACAATTGCCT--TAAG-G----ATATGCAAAC---AG-AAA-A-TGTCTT-
gi|9 : gcTGCCTTAAGGATATGC---------AAACA-G-A-A-A-A-T-GTCTT--------------CAATATT-GGA--T--TGTGC---G--GTTAAAAAAAGTATGTTAT---AGCTA-----AAGGGGAATTTATTTG-AGGAA-TTCGCCAAA-------C-AAT-TGAT-C-A-AAATAATTA---CAGTACTCGAGTAACAATAcaatattggattgtgcggttaaaaaaagtatgttatagctaaaggggaatttatttgaggaattcgccaaacaattgatcaaaataattacagtactcgagtaacaatacgaattgcattatttagggaacatccc
gi|9 : gcgcaaaatagtcacagaacgttttataaataactgaaacagcgtcgcctgtaacaggtctgaagtgtgatcgtcatttgcatgacaacatgccagccaaaaagaaacccatagttcacttatattttgcagtcggagaaggtcactgttcacgctcaacgccatactcacgagacatgccctctgtgactattatttttcccaaatctaaaaaaacaatGGATGTTCCCTAAATAATGCAAT---T--CGTATTGTTACTCGcgaattgcattatttagggaacatccc
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22 1111 111 111 333333333333 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 11111 111 22222222222222 55555555555555 222222222 111111111111 1111 2222222 11 1111111 111111 11111 22 333333333333 11 222222222 2222 2222 1111111 11 33333333333333 11111 444444444444444444444444444444444444444444444444444444444444444444444444444 11 111 11111 111 111111 22222222222222 555555555555555555555 11111111 111
lowQualScore : 555 22 0 2 66 1 2222 000 1 0 1 1 111 6 3 555555555555 6 6 888 2 0 0 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 3 2 11 4 0 0 1 1 0 0 1 44444 4 1 0 0 1 3 55 55 55 777 4 0 555 4 1 0 11111111111111 4 44444444444444 0 66 1 555555555 2 4 888888888888 1 0 1 0 7777 6666666 11 8888888 1 777777 22 55555 0 11 222222222222 8 8 11 3 1 1 8 1 222222222 0 66 5 2 0 1 1 7 66 4 9999 4 0 777 0 88 4 4 666 0 1111 9999 1 666 4 1 4 6666666 66 11 5 33333333333333 6 22222 222222222222222222222222222222222222222222222222222222222222222222222222222 1 77 000 0 1 3 00000 888 66 5 3 111 444 888888 5 1 0 0 888 3 3 3 7 7 3 3 55555555555555 111111111111111111111 22 3 6666 99999 2 3 3 4 1 33333333 3 222 3 555 1
lowQualScore : ... .. . . .. . .... ... . . . . ... . . ............ . . ... . . . ....................................................................................... . . . .. . . . . . . . . ..... . . . . . . .. .. .. ... . . ... . . . .............. . .............. . .. . ......... . . ............ . . . . .... ....... .. ....... . ...... .. ..... . .. ............ . . .. . . . . . ......... . .. . . . . . . .. . .... . . ... . .. . . ... . .... .... . ... . . . ....... .. .. . .............. . ..... ........................................................................... . .. ... . . . ..... ... .. . . ... ... ...... . . . . ... . . . . . . . .............. ..................... .. . .... ..... . . . . . ........ . ... . ... .
lowQualScore : 888 77 7 2 44 9 1111 999 7 3 0 0 777 7 7 888888888888 7 7 777 5 7 7 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 4 5 00 0 2 1 1 4 3 7 0 33333 9 4 2 2 0 4 66 55 55 000 0 7 999 0 4 5 11111111111111 4 77777777777777 8 11 9 777777777 9 4 000000000000 4 6 7 1 0000 0000000 00 6666666 4 888888 88 88888 2 55 888888888888 0 0 00 2 0 0 0 0 999999999 2 99 0 5 2 0 9 6 11 4 4444 4 9 888 1 11 0 8 222 1 9999 4444 6 444 0 0 0 2222222 99 99 0 99999999999999 4 77777 000000000000000000000000000000000000000000000000000000000000000000000000000 0 33 000 1 4 4 99999 888 99 0 4 000 999 111111 0 4 2 1 000 6 6 6 3 3 6 6 00000000000000 777777777777777777777 99 6 7777 11111 3 6 6 4 0 00000000 3 666 3 888 8
consensus : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-AACAAAAGGA-ANTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A-A-A-T-GTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
Reference ( family-1457 ) : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-AACAAAAGGA-ANTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A-A-A-T-GTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
gi|1 : GGTTGTTCCGTAAATAATGCGAC---TGCTGTATTCTTTCTTGCAAATCATGCCATATA----TA-AATAAAAAAACATTGTATCGCTAGAGTA---ATC-GCTGGT--------------T-AAG-A-T-CTGACTCAATCATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAA--------------C---GT--------------AT--------------------GCA--A-----------ATTGACTGGCCAACGAGCTGAAAATGTGCTTGAAATTATGGCC--TA-TATTCGATGTAGGTCATTACTTGAGTTGAAATCGAAAGGCATTTACTGAGAGGTGTGTAATATTTACGGGGAAGGTCA-----GATAGTATATATAATTATTTGTTGTTGGGTAGTCAGATTTCAATCTGGACAACAGCAGCTGAAA--ATGCAGCTCGCCCTGG-CGTACTCTAAC--GCCA--AC---A-ATCACAGAAAACAT--AAAAC-AATCCTCGAAATTACGAAAG------C-------T-GATGC----------------TGAGAGATTT--AGCTCCGATGACAACAT-TG-TTGTAAGCATGAAATCATCT-AAT---T----T--TAAAAAAGGTTTTAAAAGTTTTGAAAATAAATGAACGAT----GGATATCGCA-------TTTG--TTG--ACGAGGACAAAAAGA-AGTCATTTTTGAAA-ACTTGGGTTGGTTATTATGA---------GATAAAA-A-GA--AAAGCATACAAC-ATAAATTGGG---------CCACGGAAAATGCGAGACG--CCCATATATAGTAAAA-TGACTGCGATCTGCTAAGAAGGTTCTGTGTGCACTACCTTTTGCT--AGCCAAG-GTCCTGCAGCCGTACAGACA-GCGGTGCCA---AAGGGCAAAACTGCCACAGGACGG-TTT-TATACAAAC--GTAACTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAATACATGTAAATCTGAAGTATGTTTGTCTTTTACATGACATTGCAACAGCTCAAAATT---CTCGTGTTGTGAC-ATCCAT-TATGCAGTCAAAGAAAGTCGCCGTT-------CTCC--CTC--AC-CC----C-T-------CTATACTAG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTTCCAAGACTGAAAG---AAACATTTGTCTGGGAAGAG----ATAT---AAGT--CG-ACA-A-TATCCT-AGGATCTGCAC-AT-T-ACCTGTGTCTCAAGGGTATATCTGTTC-AAGAGTACG-A-C-A-T-T-ATTTT--------------CAAAATT-G-------CG--C---G--ATTGAAAAC-GTGTGCTTT---AGATA-----AACGGGAGTAT-TTTGAAGGAC-ATCGCATAA-------GAAAT-TAATCA-A-AAATGATTT---TAATACTCTAATAACAATA
gi|10 : CAGTGTCACCCTTTAA--CAGG----TCTGAAATATGTCTGTCTTTTGCATGACAACGTGCCAGCACACAAAG---CCTGTATTGTGGA-TAACTT-TTTGCAATC---------------T-------CTCC--CAC--AC-ACACAAC-C-------CAA-ACTAG---CTAGAT----------T-----TGGCCCTCTTTGACTATTT----------------T------CTC--------------TTCCAAAAACTAAAAA---AG---CTTGTCTGGAAAGAT----ATAT---AACTTCCG-A-A-A-TGCCCT----------------------------TAAGGGTAT---TGCTC-AAGAATATG-A-A-A-A-TTGTTTT--------------CAAAATT-GGA--C--TG--C----------AAGGC-ATGTGTTTTTTCATCTATAACAAACAGGAGTAT-TTTGAAAGAA-ATCAGAAAA-------ACAAT-TTAT-C-ATAAATGGTAA---AAGTATTCTAGTACCAATAtaa
gi|11 : --------------------GCA--A-----------AATATCTGGCATACAAGCAGAAAATTTACTTGAAAATAAAGCC--TT-TATTCCAGGTAGGTCATTACTTcccatcccattacatatggaacac
gi|11 : aTCA-----AATTTTGTTAAGTACTATTTGTAGGTGAATGGCCAAATTTCAATCCTGGCAAAAGCAGCTGAAAT-ATGCTTCTCACCCTGGTCATCCTGCAAT--GTCA--AC---A-ACCAAAGTGAACAT--AAAAA-AATCTGTGAAGTCCTGAAAA------C-------T-AATGC----------------T-AGATACT-----------TGACAA-ACATT-TCGTTAGCATGAGTTTATCT-AAT---T----T--GAAAAAA-CTTCTAAATGTTAAGAAAATATATTCCTGAT----GGGCAACACATTAAAATTTTG--TTG--------ACAGAAGGGTATTCCTTTTCCAAAcaaattttgttaagtactatttgtaggtgaatggccaaatttcaatcctggcaaaagcagctgaaatatgcttctcaccctggtcatcctgcaatgtcaacaaccaaagtgaacataaaaaaatctgtgaagtcctgaaaactaatgctagatacttgacaaacatttcgttagcatgagtttatctaatttgaaaaaacttctaaatgttaagaaaatatattcctgatgggcaacacattaaaattttgttgacagaagggtattccttttccaaaa
gi|12 : agcaaaatatctggcatacaagcagaaaatttacttgaaaataaagcctttattccaggtaggtcattactAATTAGTGCG--TA-TATTCGAGGTAGGTCATTACTAGCGTTGAAGTTAATAGA--TTTACCTAAAGGTGTGTGCCATTTACAGGGAGGATCA-----AATGGCGTGTAGTGTTATTTGTAGGTGTGTAGTCATATTTCTATTTGTGCAACAACAGTTGAGAG-ATTCTACTGGCGCTGGTGGTCCTGTAAC--GTTA--AC---A-ACCACAGAGAAC-----------ATCCGCATTATCCTGAAAA------CCAATGCTT-GATAC--------AT----CATACGACACTT--AGCTCAGGTGACAA-CC-TT---GTAAGCAAGAGTT----------------------------CATCTAAAGGTTAAGATAATAAATGCa
gi|13 : acACTGTT-------CTCT--CTC--AC-CC----CAT-------CCATACTAG---CCAGATTTGGCCCATTG-----TG----------------T----------------TTTTTTACTC--------------TTCCCAAGAC---AAA---AAGTACTTGTCCGG-AAGGG----ATAT---AACT--CG-AGAGA-TGCCGT-GTGATCTGC-T-ATAT-ACCAGTGTCTTAAGGAAATTACTGTTC-AAGAATACG-A-A-AGA-T-GTTTT--------------CAAAATTGG-A--TTGCG--T---G--GTTTAAAAC-GTTTGTTTT---AGCCA-----A-----------TCTGAAGGAA-ATTGAAAAA-------TAAAT-TGATAA-A-AAATTATTG---TAATATTCTAGTAACAATA
gi|13 : GCGTTCCATAAATAATACGAT---TG--GTATTGTTACTAGAATAT--TACAATAccaatcgtattatttatggaacgcttct
gi|14 : actgttctctctcaccccatccatactagccagatttggcccattgtgtttttttactcttcccaagacaaaaagtacttgtccggaagggatataactcgagagatgccgtgtgatctgctatataccagtgtcttaaggaaattactgttcaagaatacgaaagatgttttcaaaattggattgcgtggtttaaaacgtttgttttagccaatctgaaggaaattgaaaaataaattgataaaaaatTAGG---------CCACGGAAAATGTGAGACG--CGCATGTATTGCCAAA-CGATAACGATCTGTGTAGCAGGTTCTGTATGCAATAGTTTTCATT--AGCAACG-GTCCT---GCTGTACAGACA-GTGGTGCCA---AAGTGCAGAACTGTCACAGGACGGTTTT-TATAAAAAC--GTAATTT--AAATAATTGAAGAAGTACTACAAACAGCGTCGTCCTAT-A-ACAGG----TCTGAAGTATGTTTGTCTTTTGCATGACAATGCGCCAGCCCACAATA---CCCGTATTGTGACTTGATAT-TTTACAGTCAGAGAAGGTCACCGTttct
gi|15 : CTTGAAATTTGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGATATTGAA-GTCATATACCAAG--GAGTGTGACATTTATGGGGAGGGTCA-----AATGTCGTATAGTAATATTTGTAGGTGGGTGGCAAATTTTTAATCCAGGCAACAGTACTTGAAAC-ATACTGCTTGCCCTGGTCATCCTGTAACCTGT-A--A----G-ACCAAAGA--------AAAAA-AATCTCTGAAAT-CTGAAAA--------------T-GATAC--------AT----AGTAAGAGTGTTAAAGCTTGGATAACAA-AC--------TAG-------TCATCA-AAT---T----T--TGAAAAAGCATTTAAA
gi|16 : TTCCGTTAATAATGCGAC---TTTTGTATTATTTCTCGGAAAT------ATATG----TA---TGAAACATTTTCGTGGCGTTGGTGCGTAGGCCTACTGAAACACACT-G---G-T-ACATA-T-CTGCCTCAAATATTCACTGCCCTTGGTGTAATGTACATTGTTTGA-----------TAG--------------T---GT--------------ATTCATACCACTGTAATACTATGCA--A-----------AATGACTGGCAAACGAGC-GAAAAT-TGCTTGAAACTACGGCC--TA-TGGTCGAGGTAGGTCA------AGG-TGAAGTCGAAATACATTTACCGATAGTAGTGTGACATCTct
gi|17 : tggaCT-AAGATCGGC-T-ATGT-ACCAGTGTCTTAAGGGTACTTTTGTTC-AAGAATACG-A-A-A-AAT-GTTTTTCAATATTTATTTGCAAAATT-GGA--TAGCG--C---G--ATTATAAAC-TTGTGTTTC---ACATA-----TAAGAGAGTAT-CTAGAAGGAA-GT--AAAAA-------AAAATATGGT-ATA-AAATAAATA---TAGTACTCTAGCAATAATA
gi|17 : GGTGTTCCGCAAAGAAAGCGAC---TAT--TATTATTGCTatagtcgctttctttgcggaacacc
gi|18 : ctaagatcggctatgtaccagtgtcttaagggtacttttgttcaagaatacgaaaaatgtttttcaatatttatttgcaaaattggatagcgcgattataaacttgtgtttcacatataagagagtatctagaaggaagtaaaaaaaaatatggtataaaataaatatagtactctTATTTTATAAATAATGCCAC---TGGTGTATTATTTCTTTGAAATCTC---------------------ATAACTTTGTATCGCTAGAAAG---ATC-ACTGGTGCAAGTC-GCTGGTT-AAA-A-T-CTG--TTAAATATTCACTGACCTTGGTGCAATGTACATAGCTTTG-----------TAG--------------T---TT--------------AT--------------------TCATTACACTGTATGGTAATTACTGGCAAACAAGCTGAAAATGTGCTT
gi|19 : aaCTGTTC-ACGAATACG-A-A-ATA-T-GTTTTG-------------CAAAATT-GCA--T--TG--C---GCTGTTAAAAAA-GTCTGTTTT---AGTTA-----AATGGGATGAT-TTTGAAAAAATATCGAAAAAAATCGCTAAAAT-TGAT---A-TAATGATTATTGTAGTAGTCTGGTAATAATA
gi|19 : GGTGTTTCGTAAATAATGCGAT---TG--GTATTATTccaatcgcattatttacgaaacacc
gi|2 : ctgttcacgaatacgaaatatgttttgcaaaattgcattgcgctgttaaaaaagtctgttttagttaaatgggatgattttgaaaaaatatcgaaaaaaatcgctaaaattgatataatgattattgtagtagtctggtTATTTCGTTGAAATCGTGCAATATA----TA-GATCAGACAATTTGGTATCACTAGCTTG---ATC-ACTGGTGCGTGTTAGA-GC-T-AAA-A-AACTGCCTCAAACCATCGCTGATCTTGGTGCAATATACTTTGCTTGAAATTGTATTCATAG--------------CACTGT--------------AT--------------------GCA--A-----------AACGACTGGCAAACGAGCTAAGAATGTGCTTGAAACTAGAGCC--TA-TATTCGAGGAAGGTCATTACTTGGATTGAAGTTAAAAGATTTTTACCGAAAGGTGTGTGGCATTTATGGGAAGGGTCA-----GTTGTCGTAAAGTACTATTTGTATGTGGATTACCAAATATCTATCCGGGCAACAG-----AAAAGCGTGTTGCTCACCCTGGTCGCCCTGTAAC--CAGA--GC---ATATCGAATAA---AT----AAA-AATT------ATCCTGAAAAATAGTGC-------TCGATAT--------AC----AGTAAGAGATTT--AACTCGGATGACAA-AC-TTGTCGTTAGCACAAATACATCT-AGT---T----T--TGAACAAGCATTTCAAAATTAAGAAAA-AAA-GCACGAT----GGATACCACA-------TTTG--TTG--AC-A-AACAAAATAA-A----------AAAAAG--GGTT--GCTATGGCGAAAACGATTTG-GAAAATA-AATCAAAACCTCTTTTGAGAATATAGGTAGGAGTGATCTCGGAAAAT-CGATACG--CCCATGTTTTTCCAAA-TGTGTGTAATATGTTAAGAAGTTTATACTTGCAATATTTTCC-CT--AGTAACA-GTCCT---GCTGTTCAGACA-A-AGTGCCA---AATGGCAGAACTGTCACAGGACGG-TTTATAT----AC--GTAACTTTGAAACAATTGAAGAAGTACTACAAAAAGCGTTGCCCTAT-A-TCAGG----GCTGAAGTATGTTCGTCTTTTCCATAACTACGTGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACTT-TTTGTAG
gi|2 : AA---AAACACTTGTCTAGGAAAAT----GTAC---AACC--CG-AGA-AATGCCCT-GAGATCTGC-G-TT-T-ACCCTTGTTTTGAGGGTATACCTTTTC-AAGAATACGAA-A-A-A-T-GTTTT--------------CATAATTAG-A--T--TG--CACTG--TTTTAAAAT-GTGTGTTTT---AGCTA-----TAT-TAAGTAT-TTTGAAGGAA-AT-AACAAA-------GAAAT-TG-----A-ATATAATTA---TAGTATTCTAGTAGCAATAactaaaaacacttgtctaggaaaatgtacaacccgagaaatgccctgagatctgcgtttacccttgttttgagggtataccttttcaagaatacgaaaaatgttttcataattagattgcactgttttaaaatgtgtgttttagctatattaagtattttgaaggaaataacaaagaaattgaatataattatagtattctagtagcaataccaattgcattattaacataacacccc
gi|20 : tatttcgttgaaatcgtgcaatatatagatcagacaatttggtatcactagcttgatcactggtgcgtgttagagctaaaaaactgcctcaaaccatcgctgatcttggtgcaatatactttgcttgaaattgtattcatagcactgtatgcaaaacgactggcaaacgagctaagaatgtgcttgaaactagagcctatattcgaggaaggtcattacttggattgaagttaaaagatttttaccgaaaggtgtgtggcatttatgggaagggtcagttgtcgtaaagtactatttgtatgtggattaccaaatatctatccgggcaacagaaaagcgtgttgctcaccctggtcgccctgtaaccagagcatatcgaataaataaaaattatcctgaaaaatagtgctcgatatacagtaagagatttaactcggatgacaaacttgtcgttagcacaaatacatctagttttgaacaagcatttcaaaattaagaaaaaaagcacgatggataccacatttgttgacaaacaaaataaaaaaaagggttgctatggcgaaaacgatttggaaaataaatcaaaacctcttttgagaatataggtaggagtgatctcggaaaatcgatacgcccatgtttttccaaatgtgtgtaatatgttaagaagtttatacttgcaatattttccctagtaacagtcctgctgttcagacaaagtgccaaatggcagaactgtcacaggacggtttatatacgtaactttgaaacaattgaagaagtactacaaaaagcgttgccctatatcagggctgaagtatgttcgtcttttccataactacgtgccagcccacaaagcccgtattgtgactgactttttgtagactAAA-A-GA--ATAGCATCGAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACA--CCCATGTATTGCCAAA-TGATTGCGATCTGTTAAGAA-GTTATGTATACccaattgcattattaacataacacccc
gi|21 : aaaatatatgggaaaacattgtttcaatttttaatactttttgccatagttttaaaatatggattttTC-TAGAATGCG-A-ATA-A-C-AATT---------------CTAAATT-G-AATTG-CG--C---A--CTTGCAAAC-ATGTGTTT----AACTA-----AAAGGGAGACT-TTTGAAGGAA-ATCCAATAG-------GAAAT-TGAT-A-G-AAATGGTTA---TTGTACTCTAGCAACAATA
gi|21 : TGTTACGTAAGTAATGCGAT---TG--GTATTGTTGC-TAGA----GTACAATAccaatcgcattacttacgtaacaggaac
gi|22 : tctagaatgcgaataacaattctaaattgaattgcgcacttgcaaacatgtgtttaactaaaagggagacttttgaaggaaatccaataggaaattgatagaaatggtTGTTTTGAAGGAG----ATAA---AACT--AG-AGA-AATGCTCG-GGAATGTGA-T-AT-TTACAAGTGTCTTAAGGATATACCTTTTCAAAAAATACG-G-ATA-T-T-GTTTT--------------CAAAATT-------------------------------TG---------AGCCA-----AAGGAGAATAT-TCTGACGGAA-CTTGCAAAA-------CAAAT-TGAT-ggaac
gi|23 : -A-A-A-A-T----TT--------------CAAAATT-G-AATTG-TG--C---A--GTTATAAAC-ATTTGTTTC---AGCTA-----AAGGGGAGTAC-TATGAAAGA-----GTG----------------TGTC-C-A-CAATTATTA---TAGTATTCTAGTAACAA
gi|24 : ttccttttccaaaTTTAAC---AGCAGCG-GTCCTG---CCGTACAGATA-GTGGTGCCATTTGAAGGCAGAACTGTCGCAGAAAAG-TTT-TATAAAAAC--GTAATTTTGAAACCACTAAACAAGTA-TATAA----CG------TGTAA-A------------AAGTAGGTTCGTCCTTTGCAatccaatcacagtttttatggaacacccctc
gi|25 : c--AGCAATG-GTCCTGT-G--GTACAGACA-GTGGTGCCA---AAGGGCAGAATTGT-ACAGGACAG-TTT-TATAAAAAAAAGAAATTTTAAAACAATTGAAGAAGTACTGCATACAGCATCGCCCTAT-A-ACAG
gi|26 : TATGTTCGCATTTTGCATGACAACTTGCCAGTCCACAAAA---CCAATATTGTGAC-CGACGT-TTTGCAGTCAGAGAAGGTCGCCGTT-------CTCG--CTC--TG-CC----C---------CAATACTT----CCA
gi|27 : GAAGTATGTTTGTCTTTTGCATGACAACACATCATCCCACAAAG---TCCATATTGTGAC-CGACTT-TTTGCAGTCAATGAAGATCACTTTT-------CTCC--GTC--AA-CC----C-T-------C-ATACTag
gi|28 : GCAACGTACATTGTCTTA-----------TAA--------------C---GTGCTTGTTACTCTGTAT--------------------ACA--T-----------AATGACTGGAAAAC--------ATTGTGCTGTAAATTAGGACCTATA-TATTACAGGTAGACTGTTAATTG
gi|29 : G-ATGCTGCTCACACTG-TCGTTTTGTATC--ATCA--AC---A-ACCAAAGAAAACAG--AAAAA-AA-CTGCCAAATCTTGAAAA------C-------
gi|3 : TGGG---------TCAAGGAAAATATTAGAAA--TCCATGGATTGCCAAA-CGATTGCAATCTGTAAAGAGGGTTATGTATGCAATATTTTT-ACT--AGCAATA-GTCCTG---CCGTACAGATA-GCGGTGCTA---AAGGACAAAACTGTTACACGACGG-TAT-TTTAAAAAA--GTAATTTTGAAACAACTGAAAAAGTACTACAAACAGCGTCGCCCTAT-A-ACAGG----TCTGGAGTATGTTCGTCTTTTGCATGACAACACACCATCCCATTAAG---CCTGTATTGTGAT-TGACAT-TTTGCAGTCAAAGAACTTCATCGTTCCACTCACTCCCGCTCCTAC-CCA---C-TCTACTCGCAATACTTGGGCCCGTAT----------GCCTATTT----------------T----------------T------ATT--------------TTCCAAAAACT-AAAA---ATACATATGTCAGGGACGAAACATATAT---AACT--CG-AGACA-TGCCCT-GGAATCTGC-T-CTGT-ATCAGCGTCTTAAGAGTTTACTTGTTT-AAGAATACG-ACA-A-A-C-GTTTT--------------CAAAACT-GAA--TTACG--T---G--GTTAAAAGC-GTGTGGTTT---AGATA-----AAAGGGAGTAT-TTTGGAGGAA-ATTGCAAGA-------TAAAT-TTAT-A-A-AAATG-TTA---
gi|30 : ccCGCAAAA-------GATAT-TGAT-A-A-AAATGAGTA---TAGTTTTCCAGTAACAATAatcaagggagataatagtagtgtgattcctgaaagtcagtgat
gi|30 : TGTTCGGTGAATAATGCGAT---TG--ATATTGTTAC-TGGAAAtcaatcgcattattcaccgaacatacct
gi|31 : cgcaaaagatattgataaaaatgagtatagtGACACC-CGCCAATCCATAAAC---CCCTCATTTTGAC-TGACATGTTTGTTGTCAGAGAAGGTCACtacct
gi|32 : -A-A-AAATGATTA---TAG---TCTAGTCACAATA
gi|33 : GGGTGCTCCATAAATAAGGCGACGACTGCTGTATTATTTCTTGGAAATCATccgatcccattatttacgtaacacccctcgta
gi|34 : ATTATTTCTTGCAA-TCATGCAATGTA----TA-AATAAAACAACTTGGTATa
gi|35 : AAGTATGTTCGT--TTTACATGACAACGCACCAGCCCACAAAG---a
gi|4 : aTAGTGGC--TA-TATTCGAGGTAGGTTATTACATGGGTTGAAA-------ACATTAACCGAGAGGTGTGTGGCGTTTACGGGGAGG--CATAAAAGATG--GTATTGTACTACTTGAAG-----------------AA---GGG-------AGTTGAAAG-ATGCTGCTCGACCAGGTCGTCCGATAAC--GTCA--AC---A-ACCAAAGAAAACATC-AAAAC-AATCCGTGAAAGCCTGAAAA------C-------T-GATGCTCG-----AAACACAGTAAGAGACTT--AGCTCGGATGACAA-AC-TTGTCGTTAACACGTGTTCGTCT-AAT---T----TAAAAAAAAAACATCTAAAAGTT------ATAAATGCATGAT----GAATACCGCA-------TTTG--TTGACACGA-ACCAAAAGCA-GTCCGTa
gi|4 : GTGA---------G-CCAAA-ATGA--AAAGCATCTAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACG--CGCATGTATTCCCAAA-CTATTGCGATATGTTAAAAAAGTTCTGTATGCATTGTTTTT-ACT--TGCAACG-GTCCT---GCTATACAGACAGGCGGTGCCA---AATTGGAGAACTGTCATAGGACGT-TTT-TAaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|5 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaagGGATGTTCTGTAAATAATGCGAT---CGCCATATTATTTCGTGGTAACCGTGCAACATAATATTATAATGATACAACTTGGTACCGCTAGAGTG---ACT-ATTGGTACGTGTC-ACAGG-T-AAA-AAT-CTGCCTCAAACATTCACTGACCTTGGTGCAAAGTTCATTGCTTGA-----------TAG--------------C---GT--------------ATTCCTT---------------ACA--ATGTATGAT---AATGACTTGCAATCGAGCTGCAAATGTGTTTGAAATTAGGGCC--TA-TATTCGAGGTAGGT------------TGATGTCGAAAGCCATTTACCAAGA--TGTGAGACATTTACGGGGAGGGTCA-----GATGTCATATATTACTATTTGTAGGCGGGCGGCCAAATTGTAATCCGAGCAACAGCAGTTGAAAG-ATGCTGCTCGGCCTGGTCGTCTTGTAAC--ATCACTACCAAA-GCCAAAGAAAACGTAGAAAAA-AATCCATGACAACCTGAAAA------C-------T-GAAGCA-------A-----AACAAGAGATTT--AGCTCGGATAACAA-AC-TTATCGTTAACGCGAATTCATCTAAATATAT----T--TAAAAA
gi|6 : TGTAAC--GTCA--AC---A-ACCAAAGAACACAT--TGAAATAATCCGCGAAATCTTAAAAT------T-------T-GATGT--------A-----AG--AGAGGC----AGCTCGGATG--------------CTAGCACGAATTCATAT-AAT---TCAAGT--TAGAATAGCATTTAAATGTTAAGAAAATAAATGCACGATTCACGAAGTCAAGG-------GTTGCTTTG--GCGA-AA-AAAAGAA-AAT-GTTTTCGAAATAC--AGCCAAACTATTGCGA---------tga
gi|6 : aAGACAT--GGCTCCATTATTATGA---------G-TAAAA-A-AA--AAA-CTTCTACC-AGAATTTGGG---------ACGCAGAAAATGCGAAACA--CCCATGTATTGCCAAA-CGATTGTGACCAGTTTAGAAAGTTATGTATGCAATGTTTTTCACT--AGCAACG-GTCAT---GTCGTACAGACA-GCGATGCCA---AATGGCAGAACTATCACAGAGCGA-TTT-TAT-AAAAC--ATAATTCTAAAAGAATTAAAGAAGTACTACAAACAGCGTCGCCCTAT---ACAGG----GC-------TGTTCGTCTTTTGCATAACAACACaagtagtacgagttataagacatggctccattattatgagtaaaaaaaaaacttctaccagaatttgggacgcagaaaatgcgaaacacccatgtattgccaaacgattgtgaccagtttagaaagttatgtatgcaatgtttttcactagcaacggtcatgtcgtacagacagcgatgccaaatggcagaactatcacagagcgattttataaaacataattctaaaagaattaaagaagtactacaaacagcgtcgccctatacagggctgttcgtcttttgcataacaacacaa
gi|7 : atgtaacgtcaacaaccaaagaacacattgaaataatccgcgaaatcttaaaatttgatgtaagagaggcagctcggatgctagcacgaattcatataattcaagttagaatagcatttaaatgttaagaaaataaatgcacgattcacgaagtcaagggttgctttggcgaaaaaaagaaaatgttttcgaaatacagccaaactattgcgaaagtagtacgagttataCCATATATAATACGAC---TGCTGTATTATTTCTTGGAATTCATGCAATATA----TA-ATTGAAACAACCTTATATCCCTAAATTG---ATC-ACTGGTGCATGTC-GCAGG-TAAAA-A-T-CAGCCTTAAATATTCATTGATCTTGGTGCAATGCACATTGCTTTA-----------AAGTGTATTCATTACACT---GT--------------AT--------------------GCA--A-----------AATGACTTGCAAACAAACTGAAAATCTGCTTGAAATTATGCCCGATATTATTCAAGGTAGGTCATTACTTGAGTTGAAGTTGAAaa
gi|7 : ATAGCAC-ATTTGTAGATGGGTGAACTGATTTTGATTTGGGTAACAATAGTTGAAAG-ATGCTGCTCGCACTGGTC---CTGTAAC--ATCA--AC---A-ACCAAAGAAAACATT-GAAAA-AATCTGTGAAATTCTGAAAA------C-------T-GATGCTTGATATGA-----AGTAGAAGACTT-------GGATG-----------TTGTTACCACCAGTT----T-AGT---T--------------GCATCTAAAAGTTAAGAAGACAAATGCAtttttttttttctgcaaggtaaatagcacatttgtagatgggtgaactgattttgatttgggtaacaatagttgaaagatgctgctcgcactggtcctgtaacatcaacaaccaaagaaaacattgaaaaaatctgtgaaattctgaaaactgatgcttgatatgaagtagaagacttggatgttgttaccaccagtttagttgcatctaaaagttaagaagacaaatgca
gi|8 : ccatatataatacgactgctgtattatttcttggaattcatgcaatatataattgaaacaaccttatatccctaaattgatcactggtgcatgtcgcaggtaaaaatcagccttaaatattcattgatcttggtgcaatgcacattgctttaaagtgtattcattacactgtatgcaaaatgacttgcaaacaaactgaaaatctgcttgaaattatgcccgatattattcaaggtaggtcattacttgagttgaagttgaatttttttttttctgcaaggtaaCATGAAAAATG--AGACCATCCCATGTATTGCCAAAATGAATGTGAT-TGTTAAGAAGGTTCTGTATGCATTTTCTTTCACTTAGGTAACATGTCCTG---TCATACAGATG-GCAATCACA---AAGGGCTAAACAATCACCGGACA--TTT-TATTAAAAT--GTCATATTGAAATAATTGATGAAGCACTACAAACAGCATAGTCTTGTTG-G-AGT----TCTGAATTATATTCATTTGTTGCATGACAATGCGCCAGCCAACA--G---TCCTTATTGTGCC-TGACCT-CTTACAGTTAGAGAAGGTCACCATT-------CTCC--TCC--ACACC----C-C-------CAATACTCA---CCAGAC----------A-----TG----------------TCCCCCTGTAATAATTAT------CTC--------------TTCCTAAAACAAAAAAAAGAAACACTTTTCTGTGAAGAA----ATAT---AACT--TGCAAA-A-TGACATAGGAATCTGA-TAAT-T-A-CAGTGT-TTAAGGGTACATATGTTG-AAAAATA
gi|9 : GCAAAATAGTCACAGAACG--TTT-TATAAA-----------------TAACTGAA------------ACAGCGTCGCC-TGTAA--CAGG----TCTGAAGTGTGATCGTCATTTGCATGACAACATGCCAG-CCAAAAAGAAACCCATAGT-TCAC-TTATAT-TTTGCAGTCGGAGAAGGTCACTGTT-------CACG--CTCA-AC-GC----C-----------ATACTCA---CGAGAC----------A-----TG----------------C----------------C------CTCTGTGACTATTATTTTTCCCAAATCT-AAAA---AAACAATTGCCT--TAAG-G----ATATGCAAAC---AG-AAA-A-TGTCTT-
gi|9 : gcTGCCTTAAGGATATGC---------AAACA-G-A-A-A-A-T-GTCTT--------------CAATATT-GGA--T--TGTGC---G--GTTAAAAAAAGTATGTTAT---AGCTA-----AAGGGGAATTTATTTG-AGGAA-TTCGCCAAA-------C-AAT-TGAT-C-A-AAATAATTA---CAGTACTCGAGTAACAATAcaatattggattgtgcggttaaaaaaagtatgttatagctaaaggggaatttatttgaggaattcgccaaacaattgatcaaaataattacagtactcgagtaacaatacgaattgcattatttagggaacatccc
gi|9 : gcgcaaaatagtcacagaacgttttataaataactgaaacagcgtcgcctgtaacaggtctgaagtgtgatcgtcatttgcatgacaacatgccagccaaaaagaaacccatagttcacttatattttgcagtcggagaaggtcactgttcacgctcaacgccatactcacgagacatgccctctgtgactattatttttcccaaatctaaaaaaacaatGGATGTTCCCTAAATAATGCAAT---T--CGTATTGTTACTCGcgaattgcattatttagggaacatccc
blockSeqs : GAC TT T CT A ATAT TAA G C G TAG T A AAGTCGCTGGT A T AA C TAGTGTATTCATACCACTGTAATACTATGCAA A A T TA T T A A TAAAA T G A C GC CT CT CAA T AGA T T CCAATGCT C TCGAAACAC AA A ACATTTC T A TCAAGTT G A TCAC TTAAAAT CT ACACGA G TATTCC CC AAG AA AAACGATTTGG T T TC A C T G A TAGGAGTGA AT A C C A C TA T GTG G TTT GT A A AAA AAA . G AAA T T G CCACTCA CG CT A ACTCTACTCG A TGGGC TTGGCCCTCTTTGACTATTTTCTC A TA AAG G A AACAT GCA TC C G GA AGG TATA T C TAC A A C T G A T TCAATATTTATTTG AGATTGCACTGT TA A TTTC TAACA C A T C G AATCGCTA A AA T TTG T
blockSeqs : . GT T CG G . GA C T A . . G GTGTTAGAGC . . AT C AATTGTATTCATAGCACTGTATGCAA G T G GA . T A G . G G T C T . . . . CA . C ATAGTGC . TTGATATGA . A ACTTGTC C . ATATTT G A . . . GCGA A GTCCG CG TAC CC GC . . . G A A . G . . . A A A C . . G . . G . A C TGG . G . . A . . . A . ACAACC C AG TTGGCCCATTGTGTTTTTTTACTC C AA . G G T . . . G AA GT TATG . C TTT . . . T T . . G GGATTGCGTGG AT . T . A . . T A A . AT . . T
blockSeqs : . CT T CA A . AA A G T . . G GTGTCACAGG . . T C TAACGTGCTTGTTACTCTGTATACAT A T G . . C A G . T G A T G . . . . TG . T C . AT . A ACTTGTC C . TTAAA A A . . . ACA C AATG . CAT . GT . . . G A A . G . . . C A A A . . G . . G . A C AA . G . . T . . . . . CAT A AG ATGTCCCCCTGTAATAATTATCTC A T . A A G . . . G AA AA TCTG . C ACC . . . . . . . . GGATAGCGCGA AA . C . T . . C A T . C . . C
blockSeqs : . CC T CA G . AT G G G . . A ATGTCGCAGG . . T C AAGTGTATTCATTACACTGTATGCAA G T G . . T A G . T G A C C . . . . A . T C . AT . A ACTTATC C . TTG G A . . . . A A . . . . T C . T . . . C A T C . . G . . G . A C AA . T . . G . . . . . CT A CA ATGCCCTCTGTGACTATTATTT T T . T G T . . . G CA GA TAAT . C ACC . . . . . . . . GCATTGCGCTG TA . T . T . . C A A . A . . G
blockSeqs : . CT G CG G . . G G T . . G ACACTGG . . T . TAGTTTATTCATTACACTGTATGGT G T G . . C . . . T G A T G . . . . A . C C . AC . A CCTT C . TTT G A . . . A C A C . . G . . G . T A AT . A . . T . . . . . CC A CA GCCTATTTTTATT C . . G G G . . . A A GG GTT . T ACT . . . . . . . . GAATTGCGCAC GC . T . A . . T A G . C . . T
blockSeqs : . T T CA G . . . T TAGCGTATTCCTTACAATGTATGAT A . C . . T . . . A G . G . . . . A . C C . AA . A AC C . TTT . . . . . C A T . . . G . . T . A C AA . A . . A . . . . . C . T . G T A . . . A A GG TAT . . ATA . . . . . . . . GAATTGTGCAG AT . C . G . . T A G . A . . C
blockSeqs : . C T G . . . . . . . . . . G . . . . T . C T . A . . TT . . T . . . . C . . . G . . A . . T AA . G . . A . . . . . C . . . G . . . . A . . . . GC . . . . . . . . GAATTACGTGG AA . T . G . . C C C . A . . T
blockSeqs : . . G . . . . G . . . . . . T C . . . . . . . . . . G . . . . . . AA . A . . C . . . . . . . . . . GGATTGTGCGG AA . T . A . . C T T . A . . T
blockSeqs : . . T . . . . . . . . . . . . . A G . . A . . . . . . . . . GGACTGC A . . . G . . . C G . C . . C
blockSeqs : . . T A . . . . . . . . . . . . . . . . . . C C . . . . .
blockSeqs : . . . . . C . . . . .
blockSeqs : .
blockSeqCons : GTGTCGCAGG** G* AC************ GCGA*** NC**** G*** AA** **** T* AA* GGATTGCGCGG********** A**
originalCons : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGCGTC-GC-GG-T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGC--------A-----AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-AACAAAAGGA-ANTCGTTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG--GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA-ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACTAAAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGA-A-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A-A-A-T-GTTTT--------------CAAAATT-G-A--T--CG--C---G--GTTAAAAAC-GTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
finalCons : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGTGTCGCAGG--T-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------C-------T-GATGCAC------------AGTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTGGCGA---AACAAAAGGANC----TTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-GA--AAAGCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCTG---CCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAA--CAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACT-AAAA---AAACACTTGTCTGGGAAGAG----ATAT---AACT--CG-AGAAA-TGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A-A-A-T-GTTTT--------------CAAAATTGGATTGCGCGG----------TTAAAAAC-GTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGATA--A-AAATGATTA---TAGTACTCTAGTAACAATA
Alignments
lowQualScore : 111111111111111111111111111111111111111111111111111111111111111111111111111111111111111 111111111111111111111111111111111111111111111111111111111111111111111111111
lowQualScore : 22 1111 111 111 1 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 11 11111 111 111111 555555555555555555555 222222222 111111111111 1111 2222222 11 2222222 7777777777777777777777777777777 333333333333 22222 11 222222222 1111111 11 33333333333333 11111 444444444444444444444444444444444444444444444444444444444444444444444444444 1111 11111 111111 22222222222222 11111111 111
lowQualScore : 555 22 0 2 66 1 2222 000 1 0 1 1 111 6 3 99 444 3 6 888 2 0 0 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 3 2 11 4 0 0 1 1 0 0 1 44444 4 1 0 0 1 3 55 55 55 777 4 0 555 4 1 0 111111 4 666666666666666666666 0 66 1 555555555 2 4 888888888888 1 0 1 0 7777 6666666 11 4444444 2222222222222222222222222222222 0 666666666666 6 33333 99 00 8 1 222222222 0 66 5 2 0 1 1 7 66 4 777 4 0 777 0 88 4 4 666 0 55 9999 1 666 4 1 4 6666666 66 11 5 33333333333333 6 22222 222222222222222222222222222222222222222222222222222222222222222222222222222 1 77 2222 1 1 3 00000 888 0 5 444 888888 5 1 0 0 888 3 3 3 7 7 3 3 55555555555555 555 666 0 6666 99999 2 3 3 4 1 33333333 3 222 3 555 1
lowQualScore : ... .. . . .. . .... ... . . . . ... . . .. ... . . ... . . . ....................................................................................... . . . .. . . . . . . . . ..... . . . . . . .. .. .. ... . . ... . . . ...... . ..................... . .. . ......... . . ............ . . . . .... ....... .. ....... ............................... . ............ . ..... .. .. . . ......... . .. . . . . . . .. . ... . . ... . .. . . ... . .. .... . ... . . . ....... .. .. . .............. . ..... ........................................................................... . .. .... . . . ..... ... . . ... ...... . . . . ... . . . . . . . .............. ... ... . .... ..... . . . . . ........ . ... . ... .
lowQualScore : 888 77 7 2 44 9 1111 999 7 3 0 0 777 7 7 77 222 3 7 777 5 7 7 222222222222222222222222222222222222222222222222222222222222222222222222222222222222222 2 4 5 00 0 2 1 1 4 3 7 0 33333 9 4 2 2 0 4 66 55 55 000 0 7 999 0 4 5 555555 4 333333333333333333333 9 11 9 777777777 9 4 000000000000 4 6 7 1 0000 0000000 00 4444444 6666666666666666666666666666666 7 555555555555 7 33333 22 33 0 0 999999999 2 99 0 5 2 0 9 6 11 4 888 4 9 888 1 11 0 8 222 1 55 4444 6 444 0 0 0 2222222 99 99 0 99999999999999 4 77777 000000000000000000000000000000000000000000000000000000000000000000000000000 0 44 1111 7 4 4 99999 888 2 0 999 111111 0 4 2 1 000 6 6 6 3 3 6 6 00000000000000 444 555 5 7777 11111 3 6 6 4 0 00000000 3 666 3 888 8
consensus : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGTGTCGCAGGT-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------CT-GATG-------C-----AC--A--GTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--ACGA-AACAAAAG--GA----NC-TTTTCGAAATAC--GGCT-CGTTATTGCGA---------G-TAAAA-A-----GA--AAA-GCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCT---GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATA--ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAGACT-AAAA----AAACACTTGTCTGGGAAGAG----ATAT---AACTCGAG-AAATGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A-A-A-T-GTTTT--------------CAAAATTGGATTGCGC-GGTTA-AAAACGTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
Reference ( family-1457 ) : GGGTGTTCCGTAAATAATGCGAC---TGCCGTATTATTTCTTGGAAATCGTGCAATATA----TA-AATGAAACAACTTNGTATCGCTAGAGTG---ATC-ACTGGTGCGTGTCGCAGGT-AAA-A-T-CTGCCTCAAACATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAG--------------C---GT--------------AT--------------------GCA--A-----------AATGACTGGCAAACGAGCTGAAAATGTGCTTGAAATTAGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGAAGTCGAAAGACATTTACCGAGAGGTGTGTGACATTTACGGGGAGGGTCA-----GATGTCGTATAGTACTATTTGTAGGTGGGTGGCCAAATTTCAATCCGGGCAACAGCAGTTGAAAG-ATGCTGCTCGCCCTGGTCGTCCTGTAAC--GTCA--AC---A-ACCAAAGAAAACAT--AAAAA-AATCCGCGAAATCCTGAAAA------CT-GATG-------C-----AC--A--GTAAGAGACTT--AGCTCGGATGACAA-AC-TT-TCGTTAGCACGAGTTCATCT-AAT---T----T--TAAAAAAGCATCTAAAAGTTAAGAAAATAAATGCACGAT----GGATACCGCA-------TTTG--TTG--GCGA-AACAAAAG--GA----NC-TTTTCGAAANAC--GGCTCCGCTATTGCGA---------G-TAAAA-A-----GA--AAA-GCATCTAAC-AGAATNTGGG---------TCACGGAAAATGCGAGACG--CCCATGTATTGCCAAA-CGATTGCGATCTGTTAAGAAGGTTNTGTATGCAATATTTTTCACT--AGCAACG-GTCCT---GCCGTACAGACA-GCGGTGCCA---AAGGGCAGAACTGTCACAGGACGG-TTT-TATAAAAAC--GTAATTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATA--ACAGG----TCTGAAGTATGTTCGTCTTTTGCATGACAACGCGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACNT-TTTGCAGTCAGAGAAGGTCACCGTT-------CTCC--CTC--AC-CC----C-T-------CAATACTNG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTCCCAAAACT-AAAA----AAACACTTGTCTGGGAAGAG----ATAT---AACTCGAG-AAATGCCCT-GGGATCTGC-T-AT-T-ACCAGTGTCTTAAGGGTATACCTGTTC-AAGAATACG-A-A-A-A-T-GTTTT--------------CAAAATTGGATTGCGC-GGTTA-AAAACGTGTGTTTT---AGCTA-----AANGGGAGTAT-TTTGAAGGAA-ATCGNAAAA-------NAAAT-TGAT-A-A-AAATGATTA---TAGTACTCTAGTAACAATA
gi|1 : GGTTGTTCCGTAAATAATGCGAC---TGCTGTATTCTTTCTTGCAAATCATGCCATATA----TA-AATAAAAAAACATTGTATCGCTAGAGTA---ATC-GCTGGT------------T-AAG-A-T-CTGACTCAATCATTCGCTGACCTTGGTGCAATGTACATTGCTTGA-----------TAA--------------C---GT--------------AT--------------------GCA--A-----------ATTGACTGGCCAACGAGCTGAAAATGTGCTTGAAATTATGGCC--TA-TATTCGATGTAGGTCATTACTTGAGTTGAAATCGAAAGGCATTTACTGAGAGGTGTGTAATATTTACGGGGAAGGTCA-----GATAGTATATATAATTATTTGTTGTTGGGTAGTCAGATTTCAATCTGGACAACAGCAGCTGAAA--ATGCAGCTCGCCCTGG-CGTACTCTAAC--GCCA--AC---A-ATCACAGAAAACAT--AAAAC-AATCCTCGAAATTACGAAAG------CT-GATG-------C-------------TGAGAGATTT--AGCTCCGATGACAACAT-TG-TTGTAAGCATGAAATCATCT-AAT---T----T--TAAAAAAGGTTTTAAAAGTTTTGAAAATAAATGAACGAT----GGATATCGCA-------TTTG--TTG--ACGAGGACAAAAA--GAAG--TCATTTTTGAAA-ACTTGGGTTGGTTATTATGA---------GATAAAA-A-----GA--AAA-GCATACAAC-ATAAATTGGG---------CCACGGAAAATGCGAGACG--CCCATATATAGTAAAA-TGACTGCGATCTGCTAAGAAGGTTCTGTGTGCACTACCTTTTGCT--AGCCAAG-GTCCTGCAGCCGTACAGACA-GCGGTGCCA---AAGGGCAAAACTGCCACAGGACGG-TTT-TATACAAAC--GTAACTTTGAAACAATTGAAGAAGTACTACAAACAGCGTCGCCCTATAATACATGTAAATCTGAAGTATGTTTGTCTTTTACATGACATTGCAACAGCTCAAAATT---CTCGTGTTGTGAC-ATCCAT-TATGCAGTCAAAGAAAGTCGCCGTT-------CTCC--CTC--AC-CC----C-T-------CTATACTAG---CCAGAC----------G-----TG----------------T----------------T------CTC--------------TTTCCAAGACTGAAAG----AAACATTTGTCTGGGAAGAG----ATAT---AAGTCGA--CAATATCCT-AGGATCTGCAC-AT-T-ACCTGTGTCTCAAGGGTATATCTGTTC-AAGAGTACG-A-C-A-T-T-ATTTT--------------CAAA-----ATTGCGC-GATTG-AAAACGTGTGCTTT---AGATA-----AACGGGAGTAT-TTTGAAGGAC-ATCGCATAA-------GAAAT-TAATCA-A-AAATGATTT---TAATACTCTAATAACAATA
gi|10 : CAGTGTCACCCTTTA--ACAGG----TCTGAAATATGTCTGTCTTTTGCATGACAACGTGCCAGCACACAAAG---CCTGTATTGTGGA-TAACTT-TTTGCAATC---------------T-------CTCC--CAC--AC-ACACAAC-C-------CAA-ACTAG---CTAGAT----------T-----TGGCCCTCTTTGACTATTT----------------T------CTC--------------TTCCAAAAACT-AAAA----AAGC--TTGTCTGGAAAGAT----ATAT---AACTTCCG-AAATGCCCT----------------------------TAAGGGTAT---TGCTC-AAGAATATG-A-A-A-A-TTGTTTT--------------CAAAATTGGACTGC---------AAGGCATGTGTTTTTTCATCTATAACAAACAGGAGTAT-TTTGAAAGAA-ATCAGAAAA-------ACAAT-TTAT-C-ATAAATGGTAA---AAGTATTCTAGTACCAATAtaa
gi|11 : --------------------GCA--A-----------AATATCTGGCATACAAGCAGAAAATTTACTTGAAAATAAAGCC--TT-TATTCCAGGTAGGTCATTACTTcccatcccattacatatggaacac
gi|11 : aTCA-----AATTTTGTTAAGTACTATTTGTAGGTGAATGGCCAAATTTCAATCCTGGCAAAAGCAGCTGAAAT-ATGCTTCTCACCCTGGTCATCCTGCAAT--GTCA--AC---A-ACCAAAGTGAACAT--AAAAA-AATCTGTGAAGTCCTGAAAA------CT-AATG-------C-------------T-AGATACT-----------TGACAA-ACATT-TCGTTAGCATGAGTTTATCT-AAT---T----T--GAAAAAA-CTTCTAAATGTTAAGAAAATATATTCCTGAT----GGGCAACACATTAAAATTTTG--TTG--------ACAGAAG--GGTATTCC-TTTTCCAAAcaaattttgttaagtactatttgtaggtgaatggccaaatttcaatcctggcaaaagcagctgaaatatgcttctcaccctggtcatcctgcaatgtcaacaaccaaagtgaacataaaaaaatctgtgaagtcctgaaaactaatgctagatacttgacaaacatttcgttagcatgagtttatctaatttgaaaaaacttctaaatgttaagaaaatatattcctgatgggcaacacattaaaattttgttgacagaagggtattccttttccaaaa
gi|12 : agcaaaatatctggcatacaagcagaaaatttacttgaaaataaagcctttattccaggtaggtcattactAATTAGTGCG--TA-TATTCGAGGTAGGTCATTACTAGCGTTGAAGTTAATAGA--TTTACCTAAAGGTGTGTGCCATTTACAGGGAGGATCA-----AATGGCGTGTAGTGTTATTTGTAGGTGTGTAGTCATATTTCTATTTGTGCAACAACAGTTGAGAG-ATTCTACTGGCGCTGGTGGTCCTGTAAC--GTTA--AC---A-ACCACAGAGAAC-----------ATCCGCATTATCCTGAAAA------CC-AATG-------CTTGATAC--ATCATACGACACTT--AGCTCAGGTGACAA-CC-TT---GTAAGCAAGAGTT----------------------------CATCTAAAGGTTAAGATAATAAATGCa
gi|13 : acACTGTT-------CTCT--CTC--AC-CC----CAT-------CCATACTAG---CCAGATTTGGCCCATTG-----TG----------------T----------------TTTTTTACTC--------------TTCCCAAGAC---AAA----AAGTACTTGTCCGG-AAGGG----ATAT---AACTCGAG-AGATGCCGT-GTGATCTGC-T-ATAT-ACCAGTGTCTTAAGGAAATTACTGTTC-AAGAATACG-A-A-AGA-T-GTTTT--------------CAAAATTGGATTGCGT-GGTTT-AAAACGTTTGTTTT---AGCCA-----A-----------TCTGAAGGAA-ATTGAAAAA-------TAAAT-TGATAA-A-AAATTATTG---TAATATTCTAGTAACAATA
gi|13 : GCGTTCCATAAATAATACGAT---TG--GTATTGTTACTAGAATAT--TACAATAccaatcgtattatttatggaacgcttct
gi|14 : actgttctctctcaccccatccatactagccagatttggcccattgtgtttttttactcttcccaagacaaaaagtacttgtccggaagggatataactcgagagatgccgtgtgatctgctatataccagtgtcttaaggaaattactgttcaagaatacgaaagatgttttcaaaattggattgcgtggtttaaaacgtttgttttagccaatctgaaggaaattgaaaaataaattgataaaaaatTAGG---------CCACGGAAAATGTGAGACG--CGCATGTATTGCCAAA-CGATAACGATCTGTGTAGCAGGTTCTGTATGCAATAGTTTTCATT--AGCAACG-GTCCT---GCTGTACAGACA-GTGGTGCCA---AAGTGCAGAACTGTCACAGGACGGTTTT-TATAAAAAC--GTAATTT--AAATAATTGAAGAAGTACTACAAACAGCGTCGTCCTATA--ACAGG----TCTGAAGTATGTTTGTCTTTTGCATGACAATGCGCCAGCCCACAATA---CCCGTATTGTGACTTGATAT-TTTACAGTCAGAGAAGGTCACCGTttct
gi|15 : CTTGAAATTTGGGCC--TA-TATTCGAGGTAGGTCATTACTTGGGTTGATATTGAA-GTCATATACCAAG--GAGTGTGACATTTATGGGGAGGGTCA-----AATGTCGTATAGTAATATTTGTAGGTGGGTGGCAAATTTTTAATCCAGGCAACAGTACTTGAAAC-ATACTGCTTGCCCTGGTCATCCTGTAACCTGT-A--A----G-ACCAAAGA--------AAAAA-AATCTCTGAAAT-CTGAAAA-------T-GATA-------C-----AT--A--GTAAGAGTGTTAAAGCTTGGATAACAA-AC--------TAG-------TCATCA-AAT---T----T--TGAAAAAGCATTTAAA
gi|16 : TTCCGTTAATAATGCGAC---TTTTGTATTATTTCTCGGAAAT------ATATG----TA---TGAAACATTTTCGTGGCGTTGGTGCGTAGGCCTACTGAAACA---CACTGGT-ACATA-T-CTGCCTCAAATATTCACTGCCCTTGGTGTAATGTACATTGTTTGA-----------TAG--------------T---GT--------------ATTCATACCACTGTAATACTATGCA--A-----------AATGACTGGCAAACGAGC-GAAAAT-TGCTTGAAACTACGGCC--TA-TGGTCGAGGTAGGTCA------AGG-TGAAGTCGAAATACATTTACCGATAGTAGTGTGACATCTct
gi|17 : tggaCT-AAGATCGGC-T-ATGT-ACCAGTGTCTTAAGGGTACTTTTGTTC-AAGAATACG-A-A-A-AAT-GTTTTTCAATATTTATTTGCAAAATTGGATAGCGC-GATTA-TAAACTTGTGTTTC---ACATA-----TAAGAGAGTAT-CTAGAAGGAA-GT--AAAAA-------AAAATATGGT-ATA-AAATAAATA---TAGTACTCTAGCAATAATA
gi|17 : GGTGTTCCGCAAAGAAAGCGAC---TAT--TATTATTGCTatagtcgctttctttgcggaacacc
gi|18 : ctaagatcggctatgtaccagtgtcttaagggtacttttgttcaagaatacgaaaaatgtttttcaatatttatttgcaaaattggatagcgcgattataaacttgtgtttcacatataagagagtatctagaaggaagtaaaaaaaaatatggtataaaataaatatagtactctTATTTTATAAATAATGCCAC---TGGTGTATTATTTCTTTGAAATCTC---------------------ATAACTTTGTATCGCTAGAAAG---ATC-ACTGGTGCAAGTCGCTGGTTAAA-A-T-CTG--TTAAATATTCACTGACCTTGGTGCAATGTACATAGCTTTG-----------TAG--------------T---TT--------------AT--------------------TCATTACACTGTATGGTAATTACTGGCAAACAAGCTGAAAATGTGCTT
gi|19 : aaCTGTTC-ACGAATACG-A-A-ATA-T-GTTTTG-------------CAAAATTGCATTGCGC-TGTTA-AAAAAGTCTGTTTT---AGTTA-----AATGGGATGAT-TTTGAAAAAATATCGAAAAAAATCGCTAAAAT-TGAT---A-TAATGATTATTGTAGTAGTCTGGTAATAATA
gi|19 : GGTGTTTCGTAAATAATGCGAT---TG--GTATTATTccaatcgcattatttacgaaacacc
gi|2 : ctgttcacgaatacgaaatatgttttgcaaaattgcattgcgctgttaaaaaagtctgttttagttaaatgggatgattttgaaaaaatatcgaaaaaaatcgctaaaattgatataatgattattgtagtagtctggtTATTTCGTTGAAATCGTGCAATATA----TA-GATCAGACAATTTGGTATCACTAGCTTG---ATC-ACTGGTGCGTGTTAGAGCT-AAA-A-AACTGCCTCAAACCATCGCTGATCTTGGTGCAATATACTTTGCTTGAAATTGTATTCATAG--------------CACTGT--------------AT--------------------GCA--A-----------AACGACTGGCAAACGAGCTAAGAATGTGCTTGAAACTAGAGCC--TA-TATTCGAGGAAGGTCATTACTTGGATTGAAGTTAAAAGATTTTTACCGAAAGGTGTGTGGCATTTATGGGAAGGGTCA-----GTTGTCGTAAAGTACTATTTGTATGTGGATTACCAAATATCTATCCGGGCAACAG-----AAAAGCGTGTTGCTCACCCTGGTCGCCCTGTAAC--CAGA--GC---ATATCGAATAA---AT----AAA-AATT------ATCCTGAAAAATAGTGCTCGATA-------T-----AC--A--GTAAGAGATTT--AACTCGGATGACAA-AC-TTGTCGTTAGCACAAATACATCT-AGT---T----T--TGAACAAGCATTTCAAAATTAAGAAAA-AAA-GCACGAT----GGATACCACA-------TTTG--TTG--AC-A-AACAAAAT--AA----A--------AAAAAG--GGTT--GCTATGGCGAAAACGATTTG-GAAAATA-----AATCAAA-ACCTCTTTTGAGAATATAGGTAGGAGTGATCTCGGAAAAT-CGATACG--CCCATGTTTTTCCAAA-TGTGTGTAATATGTTAAGAAGTTTATACTTGCAATATTTTCC-CT--AGTAACA-GTCCT---GCTGTTCAGACA-A-AGTGCCA---AATGGCAGAACTGTCACAGGACGG-TTTATAT----AC--GTAACTTTGAAACAATTGAAGAAGTACTACAAAAAGCGTTGCCCTATA--TCAGG----GCTGAAGTATGTTCGTCTTTTCCATAACTACGTGCCAGCCCACAAAG---CCCGTATTGTGAC-TGACTT-TTTGTAG
gi|2 : AGACT-AAAA------ACACTTGTCTAGGAAAAT----GTAC---AACCCGAG-AAATGCCCT-GAGATCTGC-G-TT-T-ACCCTTGTTTTGAGGGTATACCTTTTC-AAGAATACGAA-A-A-A-T-GTTTT--------------CATAATTAGATTGCACTGTTTT-AAAATGTGTGTTTT---AGCTA-----TAT-TAAGTAT-TTTGAAGGAA-AT-AACAAA-------GAAAT-TG-----A-ATATAATTA---TAGTATTCTAGTAGCAATAactaaaaacacttgtctaggaaaatgtacaacccgagaaatgccctgagatctgcgtttacccttgttttgagggtataccttttcaagaatacgaaaaatgttttcataattagattgcactgttttaaaatgtgtgttttagctatattaagtattttgaaggaaataacaaagaaattgaatataattatagtattctagtagcaataccaattgcattattaacataacacccc
gi|20 : tatttcgttgaaatcgtgcaatatatagatcagacaatttggtatcactagcttgatcactggtgcgtgttagagctaaaaaactgcctcaaaccatcgctgatcttggtgcaatatactttgcttgaaattgtattcatagcactgtatgcaaaacgactggcaaacgagctaagaatgtgcttgaaactagagcctatattcgaggaaggtcattacttggattgaagttaaaagatttttaccgaaaggtgtgtggcatttatgggaagggtcagttgtcgtaaagtactatttgtatgtggattaccaaatatctatccgggcaacagaaaagcgtgttgctcaccctggtcgccctgtaaccagagcatatcgaataaataaaaattatcctgaaaaatagtgctcgatatacagtaagagatttaactcggatgacaaacttgtcgttagcacaaatacatctagttttgaacaagcatttcaaaattaagaaaaaaagcacgatggataccacatttgttgacaaacaaaataaaaaaaagggttgctatggcgaaaacgatttggaaaataaatcaaaacctcttttgagaatataggtaggagtgatctcggaaaatcgatacgcccatgtttttccaaatgtgtgtaatatgttaagaagtttatacttgcaatattttccctagtaacagtcctgctgttcagacaaagtgccaaatggcagaactgtcacaggacggtttatatacgtaactttgaaacaattgaagaagtactacaaaaagcgttgccctatatcagggctgaagtatgttcgtcttttccataactacgtgccagcccacaaagcccgtattgtgactgactttttgtAAA-A-----GA--ATA-GCATCGAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACA--CCCATGTATTGCCAAA-TGATTGCGATCTGTTAAGAA-GTTATGTATACccaattgcattattaacataacacccc
gi|21 : aaaatatatgggaaaacattgtttcaatttttaatactttttgccatagttttaaaatatggattttTC-TAGAATGCG-A-ATA-A-C-AATT---------------CTAAATTGAATTGCGC-ACTTG-CAAACATGTGTTT----AACTA-----AAAGGGAGACT-TTTGAAGGAA-ATCCAATAG-------GAAAT-TGAT-A-G-AAATGGTTA---TTGTACTCTAGCAACAATA
gi|21 : TGTTACGTAAGTAATGCGAT---TG--GTATTGTTGC-TAGA----GTACAATAccaatcgcattacttacgtaacaggaac
gi|22 : tctagaatgcgaataacaattctaaattgaattgcgcacttgcaaacatgtgtttaactaaaagggagacttttgaaggaaatccaataggaaattgatagaaatggtTGTTTTGAAGGAG----ATAA---AACTAGAG-AAATGCTCG-GGAATGTGA-T-AT-TTACAAGTGTCTTAAGGATATACCTTTTCAAAAAATACG-G-ATA-T-T-GTTTT--------------CAAAATTTGA-------------------------------GCCA-----AAGGAGAATAT-TCTGACGGAA-CTTGCAAAA-------CAAAT-TGAT-ggaac
gi|23 : -A-A-A-A-T----TT--------------CAAAATTGAATTGTGC-AGTTA-TAAACATTTGTTTC---AGCTA-----AAGGGGAGTAC-TATGAAAGA-----GTG----------------TGTC-C-A-CAATTATTA---TAGTATTCTAGTAACAA
gi|24 : ttccttttccaaaTTTAAC---AGCAGCG-GTCCT---GCCGTACAGATA-GTGGTGCCATTTGAAGGCAGAACTGTCGCAGAAAAG-TTT-TATAAAAAC--GTAATTTTGAAACCACTAAACAAGTA------------------TATA--ACGTG----TAAAAAGTAGGTTCGTCCTTTGCAatccaatcacagtttttatggaacacccctc
gi|25 : c--AGCAATG-GTCCT---GTGGTACAGACA-GTGGTGCCA---AAGGGCAGAATTGT-ACAGGACAG-TTT-TATAAAAAAAAGAAATTTTAAAACAATTGAAGAAGTACTGCATACAGCATCGCCCTATA--ACAG
gi|26 : TATGTTCGCATTTTGCATGACAACTTGCCAGTCCACAAAA---CCAATATTGTGAC-CGACGT-TTTGCAGTCAGAGAAGGTCGCCGTT-------CTCG--CTC--TG-CC----C---------CAATACTT----CCA
gi|27 : GAAGTATGTTTGTCTTTTGCATGACAACACATCATCCCACAAAG---TCCATATTGTGAC-CGACTT-TTTGCAGTCAATGAAGATCACTTTT-------CTCC--GTC--AA-CC----C-T-------C-ATACTag
gi|28 : GCAACGTACATTGTCTTA-----------TAA--------------C---GTGCTTGTTACTCTGTAT--------------------ACA--T-----------AATGACTGGAAAAC--------ATTGTGCTGTAAATTAGGACCTATA-TATTACAGGTAGACTGTTAATTG
gi|29 : G-ATGCTGCTCACACTG-TCGTTTTGTATC--ATCA--AC---A-ACCAAAGAAAACAG--AAAAA-AA-CTGCCAAATCTTGAAAA------C
gi|3 : TGGG---------TCAAGGAAAATATTAGAAA--TCCATGGATTGCCAAA-CGATTGCAATCTGTAAAGAGGGTTATGTATGCAATATTTTT-ACT--AGCAATA-GTCCT---GCCGTACAGATA-GCGGTGCTA---AAGGACAAAACTGTTACACGACGG-TAT-TTTAAAAAA--GTAATTTTGAAACAACTGAAAAAGTACTACAAACAGCGTCGCCCTATA--ACAGG----TCTGGAGTATGTTCGTCTTTTGCATGACAACACACCATCCCATTAAG---CCTGTATTGTGAT-TGACAT-TTTGCAGTCAAAGAACTTCATCGTTCCACTCACTCCCGCTCCTAC-CCA---C-TCTACTCGCAATACTTGGGCCCGTAT----------GCCTATTT----------------T----------------T------ATT--------------TTCCAAAAACT-AAAA----ATACATATGTCAGGGACGAAACATATAT---AACTCGAG-ACATGCCCT-GGAATCTGC-T-CTGT-ATCAGCGTCTTAAGAGTTTACTTGTTT-AAGAATACG-ACA-A-A-C-GTTTT--------------CAAAACTGAATTACGT-GGTTA-AAAGCGTGTGGTTT---AGATA-----AAAGGGAGTAT-TTTGGAGGAA-ATTGCAAGA-------TAAAT-TTAT-A-A-AAATG-TTA---
gi|30 : ccCGCAAAA-------GATAT-TGAT-A-A-AAATGAGTA---TAGTTTTCCAGTAACAATAatcaagggagataatagtagtgtgattcctgaaagtcagtgat
gi|30 : TGTTCGGTGAATAATGCGAT---TG--ATATTGTTAC-TGGAAAtcaatcgcattattcaccgaacatacct
gi|31 : cgcaaaagatattgataaaaatgagtatagtGACACC-CGCCAATCCATAAAC---CCCTCATTTTGAC-TGACATGTTTGTTGTCAGAGAAGGTCACtacct
gi|32 : -A-A-AAATGATTA---TAG---TCTAGTCACAATA
gi|33 : GGGTGCTCCATAAATAAGGCGACGACTGCTGTATTATTTCTTGGAAATCATccgatcccattatttacgtaacacccctcgta
gi|34 : ATTATTTCTTGCAA-TCATGCAATGTA----TA-AATAAAACAACTTGGTATa
gi|35 : AAGTATGTTCGT--TTTACATGACAACGCACCAGCCCACAAAG---a
gi|4 : aTAGTGGC--TA-TATTCGAGGTAGGTTATTACATGGGTTGAAA-------ACATTAACCGAGAGGTGTGTGGCGTTTACGGGGAGG--CATAAAAGATG--GTATTGTACTACTTGAAG-----------------AA---GGG-------AGTTGAAAG-ATGCTGCTCGACCAGGTCGTCCGATAAC--GTCA--AC---A-ACCAAAGAAAACATC-AAAAC-AATCCGTGAAAGCCTGAAAA------CT-GATGCTCGAAAC-----AC--A--GTAAGAGACTT--AGCTCGGATGACAA-AC-TTGTCGTTAACACGTGTTCGTCT-AAT---T----TAAAAAAAAAACATCTAAAAGTT------ATAAATGCATGAT----GAATACCGCA-------TTTG--TTGACACGA-ACCAAAAG--CA----G----TCCGTAAT---------TGTTATTGTGA---------A--AAAA-ACTTCTGA--AAATATATCCAAa
gi|4 : GTGA---------G-CCAAA-AT----GA--AAA-GCATCTAAC-AGAATGTGGG---------TCACGGAAAATGCGAGACG--CGCATGTATTCCCAAA-CTATTGCGATATGTTAAAAAAGTTCTGTATGCATTGTTTTT-ACT--TGCAACG-GTCCT---GCTATACAGACAGGCGGTGCCA---AATTGGAGAACTGTCATAGGACGT-TTT-TAaacctcaatgagagtaaagttaaaggtgagccaaaatgaaaagcatctaacagaatgtgggtcacggaaaatgcgagacgcgcatgtattcccaaactattgcgatatgttaaaaaagttctgtatgcattgtttttacttgcaacggtcctgctatacagacaggcggtgccaaattggagaactgtcataggacgttttta
gi|5 : tagtggctatattcgaggtaggttattacatgggttgaaaacattaaccgagaggtgtgtggcgtttacggggaggcataaaagatggtattgtactacttgaagaagggagttgaaagatgctgctcgaccaggtcgtccgataacgtcaacaaccaaagaaaacatcaaaacaatccgtgaaagcctgaaaactgatgctcgaaacacagtaagagacttagctcggatgacaaacttgtcgttaacacgtgttcgtctaatttaaaaaaaaaacatctaaaagttataaatgcatgatgaataccgcatttgttgacacgaaccaaaagcagtccgtaattgttattgtgaaaaaaacttctgaaaatatatccaaaacctcaatgagagtaaagttaaagGGATGTTCTGTAAATAATGCGAT---CGCCATATTATTTCGTGGTAACCGTGCAACATAATATTATAATGATACAACTTGGTACCGCTAGAGTG---ACT-ATTGGTACGTGTCACAGGT-AAA-AAT-CTGCCTCAAACATTCACTGACCTTGGTGCAAAGTTCATTGCTTGA-----------TAG--------------C---GT--------------ATTCCTT---------------ACA--ATGTATGAT---AATGACTTGCAATCGAGCTGCAAATGTGTTTGAAATTAGGGCC--TA-TATTCGAGGTAGGT------------TGATGTCGAAAGCCATTTACCAAGA--TGTGAGACATTTACGGGGAGGGTCA-----GATGTCATATATTACTATTTGTAGGCGGGCGGCCAAATTGTAATCCGAGCAACAGCAGTTGAAAG-ATGCTGCTCGGCCTGGTCGTCTTGTAAC--ATCACTACCAAA-GCCAAAGAAAACGTAGAAAAA-AATCCATGACAACCTGAAAA------CT-GAAG-------C-----AA--A--ACAAGAGATTT--AGCTCGGATAACAA-AC-TTATCGTTAACGCGAATTCATCTAAATATAT----T--TAAAAA
gi|6 : TGTAAC--GTCA--AC---A-ACCAAAGAACACAT--TGAAATAATCCGCGAAATCTTAAAAT------TT-GATG---------------------TAAGAGAGGC--AGCTCGGATG--------------CTAGCACGAATTCATAT-AAT---TCAAGT--TAGAATAGCATTTAAATGTTAAGAAAATAAATGCACGATTCACGAAGTCAAGG-------GTTGCTTTG--GCGA-AA-AAAAGAAAA----TG-TTTTCGAAATAC--AGCCAAACTATTGCGA---------tga
gi|6 : aAGACAT--GGCTCCATTATTATGA---------G-TAAAA-A-----AA--AAA--CTTCTACC-AGAATTTGGG---------ACGCAGAAAATGCGAAACA--CCCATGTATTGCCAAA-CGATTGTGACCAGTTTAGAAAGTTATGTATGCAATGTTTTTCACT--AGCAACG-GTCAT---GTCGTACAGACA-GCGATGCCA---AATGGCAGAACTATCACAGAGCGA-TTT-TAT-AAAAC--ATAATTCTAAAAGAATTAAAGAAGTACTACAAACAGCGTCGCCCTAT---ACAGG----GC-------TGTTCGTCTTTTGCATAACAACACaagtagtacgagttataagacatggctccattattatgagtaaaaaaaaaacttctaccagaatttgggacgcagaaaatgcgaaacacccatgtattgccaaacgattgtgaccagtttagaaagttatgtatgcaatgtttttcactagcaacggtcatgtcgtacagacagcgatgccaaatggcagaactatcacagagcgattttataaaacataattctaaaagaattaaagaagtactacaaacagcgtcgccctatacagggctgttcgtcttttgcataacaacacaa
gi|7 : atgtaacgtcaacaaccaaagaacacattgaaataatccgcgaaatcttaaaatttgatgtaagagaggcagctcggatgctagcacgaattcatataattcaagttagaatagcatttaaatgttaagaaaataaatgcacgattcacgaagtcaagggttgctttggcgaaaaaaagaaaatgttttcgaaatacagccaaactattgcgaaagtagtacgagttataCCATATATAATACGAC---TGCTGTATTATTTCTTGGAATTCATGCAATATA----TA-ATTGAAACAACCTTATATCCCTAAATTG---ATC-ACTGGTGCATGTCGCAGGTAAAA-A-T-CAGCCTTAAATATTCATTGATCTTGGTGCAATGCACATTGCTTTA-----------AAGTGTATTCATTACACT---GT--------------AT--------------------GCA--A-----------AATGACTTGCAAACAAACTGAAAATCTGCTTGAAATTATGCCCGATATTATTCAAGGTAGGTCATTACTTGAGTTGAAGTTGAAaa
gi|7 : ATAGCAC-ATTTGTAGATGGGTGAACTGATTTTGATTTGGGTAACAATAGTTGAAAG-ATGCTGCTCGCACTGGTC---CTGTAAC--ATCA--AC---A-ACCAAAGAAAACATT-GAAAA-AATCTGTGAAATTCTGAAAA------CT-GATG-------CTTGATATGAA--GTAGAAGACTT-------GGATG-----------TTGTTACCACCAGTT----T-AGT---T--------------GCATCTAAAAGTTAAGAAGACAAATGCAtttttttttttctgcaaggtaaatagcacatttgtagatgggtgaactgattttgatttgggtaacaatagttgaaagatgctgctcgcactggtcctgtaacatcaacaaccaaagaaaacattgaaaaaatctgtgaaattctgaaaactgatgcttgatatgaagtagaagacttggatgttgttaccaccagtttagttgcatctaaaagttaagaagacaaatgca
gi|8 : ccatatataatacgactgctgtattatttcttggaattcatgcaatatataattgaaacaaccttatatccctaaattgatcactggtgcatgtcgcaggtaaaaatcagccttaaatattcattgatcttggtgcaatgcacattgctttaaagtgtattcattacactgtatgcaaaatgacttgcaaacaaactgaaaatctgcttgaaattatgcccgatattattcaaggtaggtcattacttgagttgaagttgaatttttttttttctgcaaggtaaCATGAAAAATG--AGACCATCCCATGTATTGCCAAAATGAATGTGAT-TGTTAAGAAGGTTCTGTATGCATTTTCTTTCACTTAGGTAACATGTCCT---GTCATACAGATG-GCAATCACA---AAGGGCTAAACAATCACCGGACA--TTT-TATTAAAAT--GTCATATTGAAATAATTGATGAAGCACTACAAACAGCATAGTCTTGTT--GGAGT----TCTGAATTATATTCATTTGTTGCATGACAATGCGCCAGCCAAC--AG---TCCTTATTGTGCC-TGACCT-CTTACAGTTAGAGAAGGTCACCATT-------CTCC--TCC--ACACC----C-C-------CAATACTCA---CCAGAC----------A-----TG----------------TCCCCCTGTAATAATTAT------CTC--------------TTCCTAAAACA-AAAAAAAGAAACACTTTTCTGTGAAGAA----ATAT---AACTTGCA-AAATGACATAGGAATCTGA-TAAT-T-A-CAGTGT-TTAAGGGTACATATGTTG-AAAAATA
gi|9 : GCAAAATAGTCACAGAACG--TTT-TATAAA-----------------TAACTGAA------------ACAGCGTCGCC-TGTA--ACAGG----TCTGAAGTGTGATCGTCATTTGCATGACAACATGCCAG-CCAAAAAGAAACCCATAGT-TCAC-TTATAT-TTTGCAGTCGGAGAAGGTCACTGTT-------CACG--CTCA-AC-GC----C-----------ATACTCA---CGAGAC----------A-----TG----------------C----------------C------CTCTGTGACTATTATTTTTCCCAAATCT-AAAA----AAACAATTGCCT--TAAG-G----ATATGCAAAC---AGAAAATGTCTT-
gi|9 : gcTGCCTTAAGGATATGC---------AAACA-G-A-A-A-A-T-GTCTT--------------CAATATTGGATTGTGC-GGTTAAAAAAAGTATGTTAT---AGCTA-----AAGGGGAATTTATTTG-AGGAA-TTCGCCAAA-------C-AAT-TGAT-C-A-AAATAATTA---CAGTACTCGAGTAACAATAcaatattggattgtgcggttaaaaaaagtatgttatagctaaaggggaatttatttgaggaattcgccaaacaattgatcaaaataattacagtactcgagtaacaatacgaattgcattatttagggaacatccc
gi|9 : gcgcaaaatagtcacagaacgttttataaataactgaaacagcgtcgcctgtaacaggtctgaagtgtgatcgtcatttgcatgacaacatgccagccaaaaagaaacccatagttcacttatattttgcagtcggagaaggtcactgttcacgctcaacgccatactcacgagacatgccctctgtgactattatttttcccaaatctaaaaaaacaatGGATGTTCCCTAAATAATGCAAT---T--CGTATTGTTACTCGcgaattgcattatttagggaacatccc