lowQualScore : 11111111111111111111111111111
lowQualScore : 1 22 33333 33 1 55555555555 1 2 1 1 22222 1111 111111 22222222222222222 111111 11 11111 00000000000000000000000000000 2222222 1 1 11 11 11 11 1 111 11 1 111111111 1 1 1 22222222222222 2222222222222 111 222222 1 11111111 1 555555555 111
lowQualScore : 5 00 6 33333 66 7 4 6 66666666666 5 0 3 0 2 3 22222 4444 999999 3 33333333333333333 1 333333 99 6 0 88 99999 22222222222222222222222222222 6666666 7 5 6 33 33 33 33 5 111 00 7 0 4 888888888 3 3 3 6666 7 8888 0 1 2 44 1 1 2 3 1 3 7 99999999999999 5 3333333333333 777 1 000000 7 4 9 5 3 11111111 4 6 3 555555555 4 000
lowQualScore : . .. . ..... .. . . . ........... . . . . . . ..... .... ...... . ................. . ...... .. . . .. ..... ............................. ....... . . . .. .. .. .. . ... .. . . . ......... . . . .... . .... . . . .. . . . . . . . .............. . ............. ... . ...... . . . . . ........ . . . ......... . ...
lowQualScore : 0 33 7 33333 77 0 0 0 00000000000 0 0 3 5 5 7 00000 2222 222222 5 77777777777777777 0 555555 22 7 7 55 22222 66666666666666666666666666666 0000000 0 0 0 88 88 88 88 0 777 77 0 5 0 999999999 6 6 6 9999 3 5555 5 4 5 55 2 6 0 3 8 6 8 22222222222222 4 2222222222222 333 0 000000 0 4 8 0 7 33333333 1 4 9 000000000 2 666
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATT-GATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTNAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTT-ATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTT----NAG----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTGACCT----CTACC--T-TCA---CAC-A------TGCGCC-TCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTN-TATGTCTCTGACAATACGCATTCCTTT-AAAATGNAN---AGGCTAACTG-GC-GTA---CATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAACATGAATCACT-CTGGATGTATCTGATA-TGCATA-------TATANAC------NA-----GTTTTAAATATTCC--AAAACAACACGCCATAACAACNCNT--CAACACAATACACAAACAA-TCTGCCATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-A---CAGGTATATTTAGCG-NAGTTCTTCCACAC
Reference ( gi|1 ) : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATT-TATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAAATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTT-ATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTT----GAG----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCT----TTACC--T-TTA---CACAA------TGCGTC-TCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATATTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTTACTTAATTAC---ATGTTTT-TATGTCTCTGACAATACGCTTTCCTTT-AAA-TGAAA---AGGCTAACTG-AC-GGA---TATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATCTGATATTGCATA-------TATATAC------TA-----GTTTTAAATATTCG--AAAACAACACGCTATAACAACACTT--CAACACAATAAACAAACAA-TATGGCATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTAGAATCCATATATGTTTAGCG-AAGTTCTTCCACAC
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATT-GATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGATATTGGCGTTCAGTTAATTTTCGTTGGGA-TTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTT----TAG----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCT----CTACC--T--------------------------CGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|3 : AGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATT-GATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC-----------CGTTCAGTTAATTTTCGTTGGGATTTTTTTT-ATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTT----TAG----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCT----CTAC---------------------------C-TCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|18 : AAGATCGGCTTAATCTAAAACATGATATAA--TTATATGTGTGGAATTTTATCTTGAAA--TATTATTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : gcaTTT-ATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTT----AAG----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCT----CTACC--T-TTA---CACAA------TGCGCC-TCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|13 : TTTCGT---TGAAAACTAAATT----GAGAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCT----CTGCA--T-GCA---CAC-A------TGCGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|12 : aTGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGTTGC-----TCA---CACGACAGTCGTGCGCA-TCGCGAAACTGGGTAATCGTGGAAAGAGATGTTTacattggatgcacag
gi|14 : AAAC--ATTT----TAG----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCT----GTATCAGTATTAAGTCAC----------CATCATTGCAACATGAGGTAATC-------
gi|2 : cTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTctgtgaagagat
gi|3 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|5 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|2 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATT-AAA-TGAAA---AGGCTAACTG-AC-GGA---TATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATCTGATATTGCATA-------TATATAC------TA-----GTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTT--CAACACAATAAACAAACAA-TATGTTATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATCCATGTATATTTAACG-AAGTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|3 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTT-TATGTCTCTGACAATACGCATTCCATT-AAA-TGAAA---AGGCTAACTG-AC-GGA---TATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATCTGAT
gi|5 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAACTAC---ATGTTTT-TATGTCTCTGACAATACGCATTCCATT-AAA-TGAAA---AGACTAACTG-AC-GGA---TATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATCTGATATTGCATA-------TATATAC------TA-----GTTTTAAATATTCC--AAAACAACACGCTATAACAACACTT--CTACACAATAAACAAACAA-TATGTTATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATCCATGTATATTTAACG-AAGTTCTTCCACAC
gi|4 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTA-TATGTCTCTGACAATACGCATTCCTTT-AAA-TGGAA---AGGCTAACTG-AC-GGA---TATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATCTGATATTTCATA-------TATATAC------TT-----GTTTTAAATATTCC--AAAACAACACGCTATAACAACACTT--CAACACAATAAACAAACAA-TATGTCATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTAGAATCCATGTATATTTAGCG-AAGTTCTTCCACAC
gi|23 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTACCAGTGACTTAATTAC---ATGTTTA-TGTGTCTTTGGC
gi|21 : cACCAGTGACTTAATTACATTATGTGTA-TGTGCCTCTGATAATAt
gi|10 : ACAAGGCGCATTCTTTTGAAA-TACAT---AGGCTAACTG-GC-GTA---CATTAAG-------A-AAATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT-TAACA----ATA-------TATAAAC------AA-----GTTTTAAATACTCC--AAAATAACACGCCATAACAACTCAT--TAGCACAATACACAAATAG-T----C-TGC------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGCAT----GGGAAGTCATTCATGTATTCCATA-----CAGGTATGTTTAGTATATGTT-TTCCACA
gi|16 : tgcACAAGGTGCATTCTTTT-AAAATACAT---AGGCTTACTG-GC-GTA---CCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACG-----ACTATAACATAAATCACT-CTGGATAT
gi|8 : cgcACGCATTCATTA-AAA---AAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT-TAACA----ATG-------TATAAAC------AA-----GTTTTGAATATTCA--AAACCAATACGCCATAACAAC---T--CAATA--ACACACCAACAA-TCTGCCATAAAGAATTTA--CACAA--TAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCATA-----CAGGTATATTTAGCA-TAATTATTCCACA
gi|15 : GCATTCTTTT-AAAATACAT---AGGCTTACTG-GC-GTA---CATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACG-----ACTATAACATTAATCACT-CTGGATATA
gi|7 : acttacgcacatggtTTCTTTT-AAAATACAT---AGGCTTACTG-GA-GTT---CATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT-TGATA----ATG-------TATAAAC------AA-----GTTTTAAATATTCC--AAAACAACACACCATAACAGC--TTAATAACACAATACATAAAAAAATCTGCCA--AAG---TATT-CACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGTA-----CAGGTATATTTAGTA-TAGTTCTTCTACAC
gi|6 : acacaaggtgtaTTCTTTT-AAAATACAT---AGGCTAACTG-GT-GTA---CATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTAT-TAACAATGTATAAACTTGGTATATACAATGTATAAACAAGTTTTAAATATTCC--AGAACAACACACCATAACAACTCAA--TAACACAATACACAAACAA-TCTGCCATACAA---TATT-CAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTATA----------CAGG------------------TATATTTAGCA-TAGTTCTTCCACA
gi|9 : aacttacgcacatggcacaGGCTAACTG-GA-GTA---CATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGTAT-----------------------AAAC------AA-----GTTTTAAATATTCC--AAAACAACATGCCATTACAACTCAA--TAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATAAAG-----GTATATTTAGCA-TAGTTCTTCC
gi|11 : catacgcacaaggtgcattcttctATG-------TATAAAC------AA-----GTTTTAAATATTCC--AAAACAACACGCCATAACAACTCAA--TAACACAATACACAAACAA-TCTGCCATACAA---TATT-CAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCATA-----CAGGTATATTTTGCA-TAGTTCTTAAACACt
4 sequences could not be aligned to this particular reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 111111111 111111 1111111 11111 11 7777777777777777777777777777777 2222222 11 11 11 11 111 1 555555555555555555555555555555 4444444
lowQualScore : 3 55555 666 1 999999 3 1 1 444444444 666666 1 8888888 44444 00 77 77 5 6666666666666666666666666666666 1111111 33 33 33 33 000 1 5 0 0 4 5 22 2 88888 1 3 33 0 0 1 1 1 0 3 333333333333333333333333333333 1 1 55 1 777 4 4 777 4444 2 3 6666666 1 4
lowQualScore : . ..... ... . ...... . . . ......... ...... . ....... ..... .. .. .. . ............................... ....... .. .. .. .. ... . . . . . . .. . ..... . . .. . . . . . . . .............................. . . .. . ... . . ... .... . . ....... . .
lowQualScore : 2 00000 888 0 000000 2 7 0 333333333 444444 7 6666666 33333 00 99 99 7 7777777777777777777777777777777 7777777 88 88 88 88 000 0 7 6 1 5 2 22 2 33333 0 8 11 8 3 4 1 3 8 3 222222222222222222222222222222 0 0 55 0 888 0 8 000 7777 4 0 0000000 0 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGA-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACA-------C-A-TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC-----TG------------ATA-T-G-C-ATGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANCAACACAATACACAAACAA-TCTGCCATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTNAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTGACCTCTACC--T------TCACA-------C-A-TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGNANAGGCTAA-----CTGGCGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAACATGAATCACT-CTGGATGTATC-----TG------------ATA-T-G-C-ATATATANACNAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACNCNTCAACACAATACACAAACAA-TCTGCCATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-A----CAGGTATATTTAGCGNA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAAATTGGCGTTCAGTTAATGTTCGTTGGGATTTTTTT-ATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTTTACC--T------TTACA-------C-AATGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTT-AAATGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC-----TG------------ATATT-G-C-ATATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTA-GAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT------TA------------ACA-------ATATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCAT--A----CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgc-ATGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TATT-CAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCAT--A----CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGT--TGC----TCACACGACAGTC-G-TGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTCTGCA--T------GCACA-------C-A-TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTGTATCAGTATTAAGTCAC--------C-A-T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA-------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC-----TG------------ATA-TTG-C-ATATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC-----------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA-------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATC-----TG------------ATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTCTACC--T------TTACA-------CAA-TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATC-----TG------------ATA-T-TTC-ATATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTA-GAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATT-AAATGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC-----TG------------ATATT-G-C-ATATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTAT-CACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTATTAACAATGTATAAACTTGGTATA-T-A-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TATT-CAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTAT-------------------------A----CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT------TG------------ATA-------ATGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TATT-CACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGT--A----CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT------TA------------ACA-------ATGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCA-----ATAACACACCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCAT--A----CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGTAT------------------------------------AAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-A-----AGGTATATTTAGCATA-GTTCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 2222222 111111111 111111 1111111 11111 11 777777777777777777777777777777 2222222 11 11 11 11 111 1 1 4444444444444444444444444444 4444444
lowQualScore : 3 55555 666 0 8888888 7 1 1 444444444 666666 1 8888888 44444 00 77 77 5 666666666666666666666666666666 1111111 33 33 33 33 000 1 5 0 0 3 22 2 88888 1 2 33 0 0 1 1 2 0 3 6666666666666666666666666666 4 0 1 1 55 1 22 2 4 4 8888888 2 3 7777777 1 4
lowQualScore : . ..... ... . ....... . . . ......... ...... . ....... ..... .. .. .. . .............................. ....... .. .. .. .. ... . . . . . .. . ..... . . .. . . . . . . . ............................ . . . . .. . .. . . . ....... . . ....... . .
lowQualScore : 2 00000 888 7 0000000 3 7 0 333333333 444444 7 6666666 33333 00 99 99 7 777777777777777777777777777777 7777777 88 88 88 88 000 0 7 6 1 4 66 2 33333 0 2 11 8 3 4 1 2 8 3 7777777777777777777777777777 0 5 4 4 55 4 44 5 0 8 3333333 4 0 9999999 4 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA--A---CAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANCAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAA-ATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTTATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTTTACC--T------TTACACAA-------TGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTA-GAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT----------------TA--ACA-----A-TATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCAT---A---CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgcA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCAT---A---CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGT--TGC----TCACAC-GACAGTCGTGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTCTGCA--T------GCACAC-A-------TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTGTATCAGTATTAAGTCAC-C-A-------T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-ATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC------------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTCTACC--T------TTACACAA-------TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATC---------------TG--ATAT-TTCA-TATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTA-GAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTATTAACAATGTATAAACTTGGTATAT-A-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTAT--------------------------A---CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT----------------TG--ATA-----A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TAT-TCACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGT---A---CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT----------------TA--ACA-----A-TGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCAATAACACA-----CCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCAT---A---CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGT-----------------------------------ATAAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-A-----AGGTATATTTAGCATA-GTTCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 2222222 111111111 111111 1111111 11111 11 777777777777777777777777777777 2222222 11 11 11 11 111 1 1 4444444444444444444444444444 4444444
lowQualScore : 3 55555 666 0 8888888 7 1 1 444444444 666666 1 8888888 44444 00 77 77 5 666666666666666666666666666666 1111111 33 33 33 33 000 1 5 0 0 3 22 2 88888 1 2 33 0 0 1 1 2 0 3 6666666666666666666666666666 4 0 1 1 55 1 22 2 4 4 8888888 2 3 6666666 1 4
lowQualScore : . ..... ... . ....... . . . ......... ...... . ....... ..... .. .. .. . .............................. ....... .. .. .. .. ... . . . . . .. . ..... . . .. . . . . . . . ............................ . . . . .. . .. . . . ....... . . ....... . .
lowQualScore : 2 00000 888 7 0000000 3 7 0 333333333 444444 7 6666666 33333 00 99 99 7 777777777777777777777777777777 7777777 88 88 88 88 000 0 7 6 1 4 66 2 33333 0 2 11 8 3 4 1 2 8 3 7777777777777777777777777777 0 5 4 4 55 4 44 5 0 8 3333333 4 0 0000000 4 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-A----CAGGTATATTTAGCGTA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAA-ATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTTATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTTTACC--T------TTACACAA-------TGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTA-GAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT----------------TA--ACA-----A-TATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCAT--A----CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgcA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCAT--A----CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGT--TGC----TCACAC-GACAGTCGTGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTCTGCA--T------GCACAC-A-------TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTGTATCAGTATTAAGTCAC-C-A-------T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-ATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC------------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTCTACC--T------TTACACAA-------TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATC---------------TG--ATAT-TTCA-TATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTA-GAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTATTAACAATGTATAAACTTGGTATAT-A-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTAT-------------------------A----CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT----------------TG--ATA-----A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TAT-TCACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGT--A----CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT----------------TA--ACA-----A-TGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCAATAACACA-----CCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCAT--A----CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGT-----------------------------------ATAAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-A-----AGGTATATTTAGCATA-GTTCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 2222222 111111111 111111 1111111 11111 11 777777777777777777777777777777 2222222 11 11 11 11 111 1 1 4444444444444444444444444444 4444444
lowQualScore : 3 55555 666 0 8888888 7 1 1 444444444 666666 1 8888888 44444 00 77 77 5 666666666666666666666666666666 1111111 33 33 33 33 000 1 5 0 0 3 22 2 88888 1 2 33 0 0 1 1 2 0 3 6666666666666666666666666666 4 0 1 1 55 1 22 2 4 4 8888888 2 3 7777777 1 4
lowQualScore : . ..... ... . ....... . . . ......... ...... . ....... ..... .. .. .. . .............................. ....... .. .. .. .. ... . . . . . .. . ..... . . .. . . . . . . . ............................ . . . . .. . .. . . . ....... . . ....... . .
lowQualScore : 2 00000 888 7 0000000 3 7 0 333333333 444444 7 6666666 33333 00 99 99 7 777777777777777777777777777777 7777777 88 88 88 88 000 0 7 6 1 4 66 2 33333 0 2 11 8 3 4 1 2 8 3 7777777777777777777777777777 0 5 4 4 55 4 44 5 0 8 3333333 4 0 9999999 4 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA--A---CAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAA-ATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTTATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTTTACC--T------TTACACAA-------TGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTA-GAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT----------------TA--ACA-----A-TATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCAT---A---CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgcA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCAT---A---CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGT--TGC----TCACAC-GACAGTCGTGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTCTGCA--T------GCACAC-A-------TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTGTATCAGTATTAAGTCAC-C-A-------T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-ATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC------------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTCTACC--T------TTACACAA-------TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATC---------------TG--ATAT-TTCA-TATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTA-GAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTATTAACAATGTATAAACTTGGTATAT-A-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTAT--------------------------A---CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT----------------TG--ATA-----A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TAT-TCACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGT---A---CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT----------------TA--ACA-----A-TGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCAATAACACA-----CCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCAT---A---CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGT-----------------------------------ATAAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-A-----AGGTATATTTAGCATA-GTTCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 2222222 111111111 111111 1111111 11111 11 777777777777777777777777777777 2222222 11 11 11 11 111 1 1 4444444444444444444444444444 4444444
lowQualScore : 3 55555 666 0 8888888 7 1 1 444444444 666666 1 8888888 44444 00 77 77 5 666666666666666666666666666666 1111111 33 33 33 33 000 1 5 0 0 3 22 2 88888 1 2 33 0 0 1 1 2 0 3 6666666666666666666666666666 4 0 1 1 55 1 22 2 4 4 8888888 2 3 6666666 1 4
lowQualScore : . ..... ... . ....... . . . ......... ...... . ....... ..... .. .. .. . .............................. ....... .. .. .. .. ... . . . . . .. . ..... . . .. . . . . . . . ............................ . . . . .. . .. . . . ....... . . ....... . .
lowQualScore : 2 00000 888 7 0000000 3 7 0 333333333 444444 7 6666666 33333 00 99 99 7 777777777777777777777777777777 7777777 88 88 88 88 000 0 7 6 1 4 66 2 33333 0 2 11 8 3 4 1 2 8 3 7777777777777777777777777777 0 5 4 4 55 4 44 5 0 8 3333333 4 0 0000000 4 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-A----CAGGTATATTTAGCGTA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAA-ATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTTATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTTTACC--T------TTACACAA-------TGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTA-GAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT----------------TA--ACA-----A-TATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCAT--A----CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgcA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCAT--A----CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGT--TGC----TCACAC-GACAGTCGTGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTCTGCA--T------GCACAC-A-------TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTGTATCAGTATTAAGTCAC-C-A-------T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-ATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC------------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTCTACC--T------TTACACAA-------TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATC---------------TG--ATAT-TTCA-TATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTA-GAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTATTAACAATGTATAAACTTGGTATAT-A-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTAT-------------------------A----CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT----------------TG--ATA-----A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TAT-TCACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGT--A----CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT----------------TA--ACA-----A-TGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCAATAACACA-----CCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCAT--A----CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGT-----------------------------------ATAAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-A-----AGGTATATTTAGCATA-GTTCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 2222222 111111111 111111 1111111 11111 11 777777777777777777777777777777 2222222 11 11 11 11 111 1 1 4444444444444444444444444444 4444444
lowQualScore : 3 55555 666 0 8888888 7 1 1 444444444 666666 1 8888888 44444 00 77 77 5 666666666666666666666666666666 1111111 33 33 33 33 000 1 5 0 0 3 22 2 88888 1 2 33 0 0 1 1 2 0 3 6666666666666666666666666666 4 0 1 1 55 1 22 2 4 4 8888888 2 3 7777777 1 4
lowQualScore : . ..... ... . ....... . . . ......... ...... . ....... ..... .. .. .. . .............................. ....... .. .. .. .. ... . . . . . .. . ..... . . .. . . . . . . . ............................ . . . . .. . .. . . . ....... . . ....... . .
lowQualScore : 2 00000 888 7 0000000 3 7 0 333333333 444444 7 6666666 33333 00 99 99 7 777777777777777777777777777777 7777777 88 88 88 88 000 0 7 6 1 4 66 2 33333 0 2 11 8 3 4 1 2 8 3 7777777777777777777777777777 0 5 4 4 55 4 44 5 0 8 3333333 4 0 9999999 4 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA--A---CAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAA-ATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTTATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTTTACC--T------TTACACAA-------TGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTA-GAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT----------------TA--ACA-----A-TATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCAT---A---CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgcA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCAT---A---CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGT--TGC----TCACAC-GACAGTCGTGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTCTGCA--T------GCACAC-A-------TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTGTATCAGTATTAAGTCAC-C-A-------T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-ATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC------------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTCTACC--T------TTACACAA-------TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATC---------------TG--ATAT-TTCA-TATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTA-GAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTATTAACAATGTATAAACTTGGTATAT-A-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTAT--------------------------A---CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT----------------TG--ATA-----A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TAT-TCACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGT---A---CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT----------------TA--ACA-----A-TGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCAATAACACA-----CCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCAT---A---CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGT-----------------------------------ATAAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-A-----AGGTATATTTAGCATA-GTTCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 2222222 111111111 111111 1111111 11111 11 777777777777777777777777777777 2222222 11 11 11 11 111 1 1 4444444444444444444444444444 4444444
lowQualScore : 3 55555 666 0 8888888 7 1 1 444444444 666666 1 8888888 44444 00 77 77 5 666666666666666666666666666666 1111111 33 33 33 33 000 1 5 0 0 3 22 2 88888 1 2 33 0 0 1 1 2 0 3 6666666666666666666666666666 4 0 1 1 55 1 22 2 4 4 8888888 2 3 6666666 1 4
lowQualScore : . ..... ... . ....... . . . ......... ...... . ....... ..... .. .. .. . .............................. ....... .. .. .. .. ... . . . . . .. . ..... . . .. . . . . . . . ............................ . . . . .. . .. . . . ....... . . ....... . .
lowQualScore : 2 00000 888 7 0000000 3 7 0 333333333 444444 7 6666666 33333 00 99 99 7 777777777777777777777777777777 7777777 88 88 88 88 000 0 7 6 1 4 66 2 33333 0 2 11 8 3 4 1 2 8 3 7777777777777777777777777777 0 5 4 4 55 4 44 5 0 8 3333333 4 0 0000000 4 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-A----CAGGTATATTTAGCGTA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAA-ATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTTATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTTTACC--T------TTACACAA-------TGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTA-GAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT----------------TA--ACA-----A-TATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCAT--A----CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgcA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCAT--A----CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGT--TGC----TCACAC-GACAGTCGTGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTCTGCA--T------GCACAC-A-------TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTGTATCAGTATTAAGTCAC-C-A-------T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-ATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC------------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTCTACC--T------TTACACAA-------TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATC---------------TG--ATAT-TTCA-TATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTA-GAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTATTAACAATGTATAAACTTGGTATAT-A-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTAT-------------------------A----CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT----------------TG--ATA-----A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TAT-TCACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGT--A----CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT----------------TA--ACA-----A-TGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCAATAACACA-----CCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCAT--A----CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGT-----------------------------------ATAAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-A-----AGGTATATTTAGCATA-GTTCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 2222222 111111111 111111 1111111 11111 11 777777777777777777777777777777 2222222 11 11 11 11 111 1 1 4444444444444444444444444444 4444444
lowQualScore : 3 55555 666 0 8888888 7 1 1 444444444 666666 1 8888888 44444 00 77 77 5 666666666666666666666666666666 1111111 33 33 33 33 000 1 5 0 0 3 22 2 88888 1 2 33 0 0 1 1 2 0 3 6666666666666666666666666666 4 0 1 1 55 1 22 2 4 4 8888888 2 3 7777777 1 4
lowQualScore : . ..... ... . ....... . . . ......... ...... . ....... ..... .. .. .. . .............................. ....... .. .. .. .. ... . . . . . .. . ..... . . .. . . . . . . . ............................ . . . . .. . .. . . . ....... . . ....... . .
lowQualScore : 2 00000 888 7 0000000 3 7 0 333333333 444444 7 6666666 33333 00 99 99 7 777777777777777777777777777777 7777777 88 88 88 88 000 0 7 6 1 4 66 2 33333 0 2 11 8 3 4 1 2 8 3 7777777777777777777777777777 0 5 4 4 55 4 44 5 0 8 3333333 4 0 9999999 4 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA--A---CAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAA-ATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTTATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTTTACC--T------TTACACAA-------TGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTA-GAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT----------------TA--ACA-----A-TATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCAT---A---CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgcA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCAT---A---CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGT--TGC----TCACAC-GACAGTCGTGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTCTGCA--T------GCACAC-A-------TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTGTATCAGTATTAAGTCAC-C-A-------T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-ATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC------------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTCTACC--T------TTACACAA-------TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATC---------------TG--ATAT-TTCA-TATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTA-GAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTATTAACAATGTATAAACTTGGTATAT-A-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTAT--------------------------A---CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT----------------TG--ATA-----A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TAT-TCACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGT---A---CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT----------------TA--ACA-----A-TGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCAATAACACA-----CCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCAT---A---CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGT-----------------------------------ATAAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-A-----AGGTATATTTAGCATA-GTTCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 2222222 111111111 111111 1111111 11111 11 777777777777777777777777777777 2222222 11 11 11 11 111 1 1 4444444444444444444444444444 4444444
lowQualScore : 3 55555 666 0 8888888 7 1 1 444444444 666666 1 8888888 44444 00 77 77 5 666666666666666666666666666666 1111111 33 33 33 33 000 1 5 0 0 3 22 2 88888 1 2 33 0 0 1 1 2 0 3 6666666666666666666666666666 4 0 1 1 55 1 22 2 4 4 8888888 2 3 6666666 1 4
lowQualScore : . ..... ... . ....... . . . ......... ...... . ....... ..... .. .. .. . .............................. ....... .. .. .. .. ... . . . . . .. . ..... . . .. . . . . . . . ............................ . . . . .. . .. . . . ....... . . ....... . .
lowQualScore : 2 00000 888 7 0000000 3 7 0 333333333 444444 7 6666666 33333 00 99 99 7 777777777777777777777777777777 7777777 88 88 88 88 000 0 7 6 1 4 66 2 33333 0 2 11 8 3 4 1 2 8 3 7777777777777777777777777777 0 5 4 4 55 4 44 5 0 8 3333333 4 0 0000000 4 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-A----CAGGTATATTTAGCGTA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAA-ATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTTATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTTTACC--T------TTACACAA-------TGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTA-GAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT----------------TA--ACA-----A-TATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCAT--A----CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgcA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCAT--A----CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGT--TGC----TCACAC-GACAGTCGTGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTCTGCA--T------GCACAC-A-------TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTGTATCAGTATTAAGTCAC-C-A-------T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-ATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC------------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTCTA------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTCTACC--T------TTACACAA-------TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTGA---TATC---------------TG--ATAT-TTCA-TATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTA-GAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATC---------------TG--ATATTG-CA-TATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATC-CATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTATTAACAATGTATAAACTTGGTATAT-A-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTAT-------------------------A----CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT----------------TG--ATA-----A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TAT-TCACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGT--A----CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT----------------TA--ACA-----A-TGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCAATAACACA-----CCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCAT--A----CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGACTATA-----ACATAAATCACT-CTGAATGT-----------------------------------ATAAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-A-----AGGTATATTTAGCATA-GTTCTTCC
blockSeqs : T ATTTT CAA CGTGAT T C C CAAAG CAAGAA T GTTTTTT ATAAA TG AA CA A GTTGCTCACACGACAGTCGTGCG GTGGAAA TA AC AT . ATT T T A AC T ATGGA T T GA T A A T TAACAATGTATAAACTTGGTATATAC A A A AA T AT C A A AATTTA C T ATAATC T T
blockSeqs : T . CAA . T T G GAAAG . A . . G . . . TCAGTATTAAGTCACCAT . . . . . . A . A AC T . T T AA T A A . CTGATATTGC . A A . T AA C . G CTAT G T AGAATC T .
blockSeqs : . . TA C T G . A . . G . . . CCTTTACACAATGCG . . . . . . A . A AC T . T A AC T A A . CTGATATTTC . T T . A TT A . G TAT T G ATAATC A .
blockSeqs : C T G . A . . G . . . CATGCACACATGCG . . T . A GA A . G A AC T A G . CTGATATTGC . T T . A TT A . G TTA G G AA A .
blockSeqs : T T G . A . . . . . . . . . A . A GA A . G A AC A A G . TAACA . T T . A TT A . A TTA T G A A .
blockSeqs : . A G . . . . . . . . . . T . A GG A . G A AC . A G . TGATA . A A . T AA C . A TTA A T A T .
blockSeqs : . GA A . G T GA . A G . TAACA . A A . T AA C . . TAT T T A T .
blockSeqs : . AC T . T T GA . . A . . . A A . T AA C . . TAT A T A T .
blockSeqs : . AC T . T T GA . . A . . A A . T AA . . . . . . A T .
blockSeqs : . AC C . T T GA . . A .
blockSeqs : . . . . T . . . . . .
blockSeqCons : TTCACACATGCG****************** TGATATTC******************** A******
originalCons : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTACC--T------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATC---------------TG--ATAT-G-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AA---CAGGTATATTTAGCGTA-GTTCTTCCACAC
finalCons : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTCTATTCACACATGCG------------------CCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATTGATATTC--------------------A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA------CAGGTATATTTAGCGTA-GTTCTTCCACAC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA
Alignments
lowQualScore : 22222 2222222 111111111 111111 1111111 11111 11 8888888888888888888888888888888888888888 2222222 11 11 11 11 111 1 11111 5555555555555555555555555555 44444
lowQualScore : 3 55555 666 0 8888888 7 1 1 444444444 666666 1 8888888 44444 00 77 77 5 5555555555555555555555555555555555555555 1111111 33 33 33 33 000 1 5 0 0 3 22 2 88888 1 2 33 0 44444 2 0 3 0 3333333333333333333333333333 4 1 1 55 1 22 2 4 4 8888888 2 3 00000 1 4
lowQualScore : . ..... ... . ....... . . . ......... ...... . ....... ..... .. .. .. . ........................................ ....... .. .. .. .. ... . . . . . .. . ..... . . .. . ..... . . . . ............................ . . . .. . .. . . . ....... . . ..... . .
lowQualScore : 2 00000 888 7 0000000 3 7 0 333333333 444444 7 6666666 33333 00 99 99 7 6666666666666666666666666666666666666666 7777777 88 88 88 88 000 0 7 6 1 4 66 2 33333 0 2 11 8 22222 2 8 3 8 1111111111111111111111111111 0 4 4 55 4 44 5 0 8 3333333 4 0 00000 4 0
consensus : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTC----T--A--T----------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTATCTGA------------------TATT-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-AATCCAGGTATATTTAGCGTA-GTTCTTCCACAC
Reference ( family-1221 ) : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-A-ATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTGAAAACCAATTTNA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTGACCTC----T--A--T----------TCACAC-A-------TGCGCCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--AC--ATTGTGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACCAGTGACTTAATTAC---ATGTTTNT-ATGTCTCTGACAATACGCATTCCTTTAAAATGCANAGGCTAA-----CTGGCGTACATTAAGAAACANCGAAAATGTCATTTGACCTTGCCCGGACGACTATATTATAGCATGAATCACT-CTGGATGTAT-TGA------------------TATT-CA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCANTAACACAATACACAAACAA-TCTGCCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTNATGGGAAGCCATTCATGTATTCCGTA-----CAGGTATATTTAGCGTA-GTTCTTCCACAC
gi|1 : AAGGGCTAGGTTCACGAGTATCCAAAATCGGCCCAATCTCAAAAATTTATAAGATTATATGTATGGA-----ATCTTGAAA--ATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTTATTTTAATACGTGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTGAA-ATTGGCGTTCAGTTAATGTTCGTTGGGA-TTTTTTTATTTCGTTGTTTTGATTTCGATGACATTTTCGTGTTTGAAAACCAATTTGA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTTTTAACCTT----T--ACCT----------TTACACAA-------TGCGTCTCGCAACACGGGGTAATC-------GAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAATTTCACTCGTTGGATAAAAGTTTCCTCATGCTGGAT
gi|1 : ATACCAGTTACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCTTTCCTTTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGCAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATCTGA------------------TATTGCA-TATATATACTAGTTTTAAATATTCGAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGGCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGTTGAAAAGAAATGCATTTATGGGAAGCCATTCAGGTATTCCGTAGAATCCATATATGTTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagttacttaattacatgtttttatgtctctgacaatacgctttcctttaaatgaaaaggctaactgacggatattaagcaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaacaacacgctataacaacacttcaacacaataaacaaacaatatggcatgcagttatcacaaaatagtgaaacgaaattgtagttgaaaagaaatgcatttatgggaagccattcaggtattccgtagaatccatatatgtttagcgaagttcttccacac
gi|10 : aagggctaggttcacgagtatccaaaatcggcccaatctcaaaaatttataagattatatgtatggaatcttgaaaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgtttattttaatacgtggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgaaattggcgttcagttaatgttcgttgggatttttttatttcgttgttttgatttcgatgacattttcgtgtttgaaaaccaatttgagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaatttttaacctttacctttacacaatgcgtctcgcaacacggggtaatcgaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaatttcactcgttggataaaagtttcctcatgctggatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatattgtacgaattatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACAAGGCGCATTCTTTTGAAATACATAGGCTAA-----CTGGCGTACATTAAGAAA--------ATGTCATTTGACCTTGCCCGGACGACT----T-TAACACAAATCACT-CTGGATGTAT-TAA------------------CA----A-TATATAAACAAGTTTTAAATACTCCAAAA--TAACACGCCATAACAACTCATTAGCACAATACACAAATAG-TCTGC-----------------CAAAATAATGAATCGAAATTGTAGTCGAAAAGAAATGC----ATGGGAAGTCATTCATGTATTCCATA-----CAGGTATGTTTAGTATATGTT-TTCCACA
gi|11 : tgcA-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACGCCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTG-AACGAAATTGTAGATGAAAAGAAATGCATTCATGGGAAGCCATTTATGTATTCCATA-----CAGGTATATTTTGCATA-GTTCTTAAACAC
gi|12 : TGAAAACCAAATTCACAAAG----TTA------AAATTGTTTTTTCAAAT-----TTTCGGTACATTAAAATC--CGAATATTT-T--GATAACATAACATGTTTTAATTAGAGACCTCAAGTT--G--C----------TCACAC-GACAGTCGTGCGCATCGCGAAACTGGGTAATCGTGGAAAGAGATGTTT
gi|13 : TTCGT---TGAAAACTAAATTGA----GAAAGTAACAAGAAAAAAT-------CAGTAATAAATTT--------TAAAATC--CG--AATATATCAATTA-CATAATGTGTTTTAATCAGTGACCTC----TGCA--T----------GCACAC-A-------TGCG
gi|14 : atAAAC--ATTTTA----G----TGC------AAA---------C---------TTTCAGCTCATTTGAATTTGAG--TATTTAT--ATTA-CATAACACATTTGAATTACTGACCTG----T--A--TCAGTATTAAGTCAC-C-A-------T---CATTGCAACATGAGGTAATC-------acattggatgcacag
gi|15 : cGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACATTAAGAAACATCGAAAATTTCATTTGACCATGCCCGGACGAC-----TATAACATTAATCACT-CTGGATATActgtgaagagat
gi|16 : acttacgcacatggtACAAGGTGCATTCTTTTAAAATACATAGGCTTA-----CTGGCGTACCTTAAGAAACATCAAAAATGTCATTTGACCTTGCCCGGACGAC-----TATAACATAAATCACT-CTGGATAT
gi|18 : cgcGCAAAGATCGGCTTAATCTAAAACAT-GATATAATTATATGTGTGGAATTTTATCTTGAAATA--TTATTT
gi|2 : AAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTAAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGCCGTG-ATATTGGCGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATCAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTC----T--A--------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTTTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|2 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATAT--AC--ACACATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|2 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTTTATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACACATGTCATTTGACTTTCCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATCTGA------------------TATTGCA-TATATATACTAGTTTTAAATATTCGAAAAAACAACGCGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAGATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATCCATGTATATTTAACGAA-GTTCTTCCACAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgttttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacacatgtcatttgactttcctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattcgaaaaaacaacgcgctataacaacacttcaacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagagatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccaca
gi|21 : aagggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaatttaaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgtgatattggcgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccatcaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtttattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnACCAGTGACTTAATTACATTATGTGTAT-GTGCCTCTGATAATA
gi|23 : TACCAGTGACTTAATTAC---ATGTTTAT-GTGTCTTTGGC
gi|3 : cAGGGCTAGGTTCACGAGTAGCCAAAATCGGCCCAATCTCAAAAATTGATAAGATTATATGTATGGA-----ATCTTGAAACAATTTATTTTTTGTATTTGGTACTGTTTTTTTATATAACATAATATTATGTAAACACTGTTAATTTTAATACATGGTGTCGAAGGAGAAAACACGTTATTTTTGGCGACGTACGCAAAATGACGTCGTGAACGGC------------CGTTCAGTTAATTTTCGTTGGGATTTTTTTTATTTCGTTGTTTTGATTTCGATGACATATTCGTGTTTCATAACCAATTTTA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GCG--TGTTTAT--GTTA-CATAGCGTGTTCTAATTATTAACCTC----T--A--------------------------------CCTCGCAACACGGGGTAATC-------AAGGTGTGTATTAGTGTGCACCTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGATt
gi|3 : TAAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAAT--TATATACAC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|3 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnATACCAGTGACTTAATTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGTTTATATTATAGCATGAATCACT-CTGAATGTATCTGA------------------Tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttttatgtctctgacaatacgcattccattaaatgaaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgtttatattatagcatgaatcactctgaatgtatctgat
gi|4 : agggctaggttcacgagtagccaaaatcggcccaatctcaaaaattgataagattatatgtatggaatcttgaaacaatttattttttgtatttggtactgtttttttatataacataatattatgtaaacactgttaattttaatacatggtgtcgaaggagaaaacacgttatttttggcgacgtacgcaaaatgacgtcgtgaacggccgttcagttaattttcgttgggattttttttatttcgttgttttgatttcgatgacatattcgtgtttcataaccaattttagtgaaaaatcaatatttcggcccattaaaatcgcgtgtttatgttacatagcgtgttctaattattaacctctacctcgcaacacggggtaatcaaggtgtgtattagtgtgcaccttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaacagagacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatacacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTTTATTTCGTTGTTTTGAACTCGATGACATATTCGTGTTTGAAAACTAATTTAA----G----TGA------AAAAT-------CAATA-----TTTCGGCCCATTAAAATC-GAA--TGTTTAT--GTTA-CATAACGTGTTCTAATTATTAACCTC----T--ACCT----------TTACAC-AA------TGCGCCTCGCAACACAGGGTAATC-------GAGGTGTTTATTAGTGTGCTACTTTTGGTGAGGACGTGTAATAAAGTCGTAACCGCAAATTCACTCGTTGGATAAAAGTTTCCTCATGCTTGAT
gi|4 : AACAGAAACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAATACTGTACGAATTATATAT--AC--AC--ATTGTGATTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|4 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttATACCAGTGACTTAATTAC---ATGTTTAT-ATGTCTCTGACAATACGCATTCCTTTAAA-TGGAAAGGCTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTGTATTATAGCATGAATCACT-CTG-ATAT-C-TGA------------------TATTTCA-TATATATACTTGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCAACACAATAAACAAACAA-TATGTCATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAGAAGAAATGCATTTATGGGAAGCCATTCGGGTATTCCGTAGAATCCATGTATATTTAGCGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaattacatgtttatatgtctctgacaatacgcattcctttaaatggaaaggctaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattgtattatagcatgaatcactctgatatctgatatttcatatatatacttgttttaaatattccaaaacaacacgctataacaacacttcaacacaataaacaaacaatatgtcatgcagttatcacaaaatagtgaaacgaaattgtagatgagaagaaatgcatttatgggaagccattcgggtattccgtagaatccatgtatatttagcgaagttcttccacac
gi|5 : tttatttcgttgttttgaactcgatgacatattcgtgtttgaaaactaatttaagtgaaaaatcaatatttcggcccattaaaatcgaatgtttatgttacataacgtgttctaattattaacctctacctttacacaatgcgcctcgcaacacagggtaatcgaggtgtttattagtgtgctacttttggtgaggacgtgtaataaagtcgtaaccgcaaattcactcgttggataaaagtttcctcatgcttgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaacagaaacagctgattttctagtacgttttactaaattatataatttaatactgtacgaattatatatacacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnAACAGAGACAGCTGATTTTCTAGTACGTTTTACTAAATTATATAATTTAAAACTGTACGAAT--TATAT--ACATAC--ATTGTGATT
gi|5 : ATACCAGTGACTTAACTAC---ATGTTTTT-ATGTCTCTGACAATACGCATTCCATTAAA-TGAAAAGACTAA-----CTGACGGATATTAAGAAACAACACAAATGTCATTTGACTTTGCTCAGACGATTATATTATAGCATGAATCACT-CTGAATGTATCTGA------------------TATTGCA-TATATATACTAGTTTTAAATATTCCAAAA--CAACACGCTATAACAACACTTCTACACAATAAACAAACAA-TATGTTATGCAG---TTA-TCACAAAATAGTGAAACGAAATTGTAGATGAAAAGAAATGCATTGATGGGAAGCCATTCAGGTATTCCGTATAATCCATGTATATTTAACGAA-GTTCTTCCACACnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnataccagtgacttaactacatgtttttatgtctctgacaatacgcattccattaaatgaaaagactaactgacggatattaagaaacaacacaaatgtcatttgactttgctcagacgattatattatagcatgaatcactctgaatgtatctgatattgcatatatatactagttttaaatattccaaaacaacacgctataacaacacttctacacaataaacaaacaatatgttatgcagttatcacaaaatagtgaaacgaaattgtagatgaaaagaaatgcattgatgggaagccattcaggtattccgtataatccatgtatatttaacgaagttcttccacac
gi|6 : aacagagacagctgattttctagtacgttttactaaattatataatttaaaactgtacgaattatatacatacattgtgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCACATTCTTTTAAAATACATAGGCTAA-----CTGGTGTACATTAAGAAACATTGAAAATGTCATTTGACCTTGCGCTGACGACTATAATATA-----AATCACT-CTGGATGTAT-TAACAATGTATAAACTTGGTATATA-CAATGTATAAACAAGTTTTAAATATTCCAGAA--CAACACACCATAACAACTCAATAACACAATACACAAACAA-TCTGCCATACAA---TAT-TCAGAAAATAGTGAAACGAAATTGAAGATGAAAAGAAATGCATTTA-----------------------TA-----CAGGTATATTTAGCATA-GTTCTTCCACA
gi|7 : aacttacgcacatggACAAGGTGTATTCTTTTAAAATACATAGGCTTA-----CTGGAGTTCATTAAGAAACATCGAAAAAGGAATTTGACCTTGCCCGGACGACTATA-----ACATAAAT-ACTTCTGGATATAT-TGA------------------TA----A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACACACCATAACAGCTTAATAACACAATACATAAAAAAATCTGCCA--AAG---TAT-TCACAAAACAGTGAATCGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAAACATTCATGTATTCCGTA-----CAGGTATATTTAGTATA-GTTCTTCTACAC
gi|8 : acACGCATTCATTAAAAAAACACAGGCTAAATGGACTGGAGTACATTAAGAAACATCGAAAATGTCATTTGACCTTGCCCTGACGACTACA-----ACATAAATAACT-TTGGATGTAT-TAA------------------CA----A-TGTATAAACAAGTTTTGAATATTCAAAAC--CAATACGCCATAACAACTCAATAACACA-----CCAACAA-TCTGCCATAAAGAATTTA--CAC--AATAGTGATAAGAAATTGTAGATGAAAAAAAATGCATTTATGGGAAGCCATTCGTGTATTCCATA-----CAGGTATATTTAGCATA-ATTATTCCACA
gi|9 : ACAAGGTGCATTCTTCT----------GGCTAA-----CTGGAGTACATTAAAAAACATTGAAAATGTCATTTGACCTTGCCCGGATGAC-----TATAACATAAATCACT-CTGA----------------------------------A-TGTATAAACAAGTTTTAAATATTCCAAAA--CAACATGCCATTACAACTCAATAACACAATACACAAACAG-TCGGCCAT--AA---CTATTCACAAAACAGTGATAAGAAATTGTAGATGAAAAGAAATGCATTAATGGGAAGCCATTCATATATTCAATA-----AAGGTATATTTAGCATA-GTTCTTCC
4 sequences could not be aligned to this reference sequence:
Unaligned ( gi|17 ): AAAAAAAAAATGTTTTAGTGCATTTTTCGATTTATTTGAATTCGAGTATCTCTATTCCAGTACGCGTTTGAAT
Unaligned ( gi|19 ): TGGTTTTAGTGTGAACTTTGGCTCATTTGGATTTGAGTACTGGTATAACATGATGCATTTTA
Unaligned ( gi|20 ): TTTTACTGCAATCTTTAAATTCGAATATATCTATTACATAACACATTTTAATTAC
Unaligned ( gi|22 ): CATTAATTTTCGTTGGTGTTGAAAACAAAATTTAGGAAAAAA